KEGG   Vibrio parahaemolyticus RIMD 2210633: VP0590
Entry
VP0590            CDS       T00120                                 
Name
(GenBank) protein-export membrane protein SecD
  KO
K03072  preprotein translocase subunit SecD
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa03060  Protein export
vpa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VP0590
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VP0590
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpa02044]
    VP0590
Secretion system [BR:vpa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VP0590
SSDB
Motif
Pfam: SecD-TM1 SecD_1st SecD_SecF MMPL Sec_GG Carot_N
Other DBs
NCBI-ProteinID: BAC58853
UniProt: Q87S34
Position
1:616938..618794
AA seq 618 aa
MLNRYPLWKYLMVFFAIITAALYALPNIYGEDPAIQVTGARGASVDMSTLDAVTTALDKE
HLSHKSIAFENGSILVRFNDTDTQISARDVISEALGKDKIVALNLAPSTPDWLEAIGASP
LKLGLDLRGGVHFLMEVDMDAAMEKLVGQQEEAFRSELRDAKIRYRAIRPSGKEGVEVLL
RDEEQLAEAKRTLTKNHPDMNFVESDSNGRYALIATFTEQRLQEIRNYAVEQNITILRNR
VNELGVAEPLVQRQGASRIVVELPGVQDTARAKEILGATATLEFREVDDKADLAAAANGR
APAGSEIKQDRDGRPVVLKKRVILSGASITDASSSVDEYGRPQVNISLDSEGGNKMSAFS
KKNIGKLMATVFAEYKDSGRKTPEGKVILTKHEEVINQATIQSALGRNFRITGIDSAAEA
HNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQACVWGMVAVMLFTLLYYRGFGL
IANIALMANLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELRDGRS
PQQAIHQGYANAFSTIADANITTLITAIILFAVGTGAVKGFAVTLSIGILTSMFTAIIGT
RCIVNLLYGGKRVDKLSI
NT seq 1857 nt   +upstreamnt  +downstreamnt
gtgctaaaccgttacccattatggaagtacttgatggtgttttttgccatcatcaccgct
gcattgtatgcacttccaaatatctacggtgaagatccggctattcaagttacaggggcg
cgtggcgcctctgtagatatgtcaacgctggatgctgtcaccactgctcttgataaagag
catctctctcataaatccattgctttcgagaatggatcaattcttgttcgtttcaacgac
actgatactcaaattagtgctcgtgatgtcatcagcgaagcgcttggcaaagacaaaatt
gttgcacttaaccttgctccttctactccagattggctagaagcaattggtgcgtcgcca
cttaaactaggtcttgacctacgtggtggtgttcacttcttgatggaagtggatatggac
gcagcaatggaaaagcttgttggtcaacaagaggaagctttccgtagtgaacttcgtgac
gctaagattcgttaccgtgcaatccgtccttctggcaaagaaggggtggaagtactgcta
cgtgacgaagagcaactggctgaagcgaagcgcacgctaacgaagaatcatcctgacatg
aactttgtcgagtctgattcgaatggtcgttacgctcttatcgccacttttactgagcaa
cgtttgcaagagattcgtaactacgctgtagaacaaaacatcacgattctacgtaaccgt
gtaaacgaactgggtgttgctgagccgcttgtgcaacgtcaaggcgctagccgcatcgtt
gttgagctgccaggtgttcaagacacagctcgtgcgaaagaaattctcggtgctacggca
acccttgaattccgtgaagttgatgataaagctgatttagctgcggcggcgaatggccgt
gcacctgcgggcagtgaaatcaaacaagatcgcgatggtcgtcctgttgtacttaaaaag
cgtgtcatcctaagcggcgctagcatcacggatgcaagttctagtgtggatgaatacggt
cgccctcaagttaacatctcgctagacagcgagggtggtaacaagatgtcggcgttctca
aagaaaaacattggtaaattaatggctaccgtgtttgctgagtacaaagatagcggtcgt
aaaacgcctgaaggcaaagttatcctgactaagcacgaagaagtgattaaccaagcaacg
attcaatctgcacttggccgtaacttccgtattacaggtatcgactctgctgctgaagcg
cacaacctcgcacttctattacgtgctggtgcacttatcgcaccgatctctatcgttgaa
gaacgtaccattggtccgtcaatgggtcagcaaaacatcgacatgggtatccaagcgtgt
gtttggggtatggtagctgtaatgctatttactctgctttactaccgcggctttggtctg
attgccaatattgcgttgatggctaacttagtgttgatcattggtgtgatgtctatgatt
ccaggggcaacgatgacgctgccaggtattgccggtatcgtattgactgtgggtatggcc
gtcgatgctaacgtactgatctttgaacgtatccgtgaagagctgcgagatggacgcagt
ccacaacaagcgattcaccaaggttacgccaacgcatttagtaccattgccgatgcgaac
atcacgacgcttatcactgcaatcattctgtttgctgttggtacaggtgcagtgaaaggt
ttcgcagttactctatctatcggtatcttaacttcaatgttcaccgccatcattggtaca
cgttgtatcgtgaacctactgtacggtggcaaacgcgttgataaattgtcgatctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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