KEGG   Xenopus laevis (African clawed frog): 100049151
Entry
100049151         CDS       T01010                                 
Symbol
zc3h11a.S, zc3h11a
Name
(RefSeq) zinc finger CCCH-type containing 11A S homeolog
  KO
K22415  zinc finger CCCH domain-containing protein 11
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    100049151 (zc3h11a.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100049151 (zc3h11a.S)
SSDB
Motif
Pfam: zf-CCCH_3 zf-CCCH_2 zf_CCCH_4
Other DBs
NCBI-GeneID: 100049151
NCBI-ProteinID: NP_001091442
Xenbase: XB-GENE-6078999
UniProt: A4QNS6
Position
2S:complement(59374738..59434881)
AA seq 794 aa
MSNQGEDCYFYFYSTCTKGDDCPFRHCEAAVGSETVCTLWKEGQCFRQICKFRHMEMNKK
RSEIPCYWENQPSGCQKGNCAFHHTKGRFVDGVFMPPSNSSLPKPEPSTVEPPTSQLSLT
QVKLSVASAPQIRGVKKIEANENIPSPTHPPVVINAADDDEDDDDLISEEGDEMKNTGQL
HSSSIAHQGTRIISTRNSATPQKIIKDTSLNFGIKTLEEIKLKRQKGEQNSQADAMDGSS
IQTAPGEDMIVRTVSFYAKDKSSMCLSLAQRLGKRTAPTEENPLADSVGECVPSAKKSLH
QRLGRRITPHGIGIDAKKVRSPRPLKERLGLPTEQNSVETEKAARPAPEFHIKTLQEIQQ
EKANQKQQQKSELLPCKSKVTLNAETGVAPKMQPSLHIKTFSEKDAEKRHRQLKVKTHVS
QEEKKYKLGSHRDEIHKNDHGTKRPRTEEQQGEAGKEVNPVKTTLTENVHNKKEMKSELK
GNYVAGPVNLKRPHSSLSPPRSSAQEAKGTSQSIEQVRVKTLEEIRREKAQRLQQVSKQE
KTQSEESQPQPLSKHKRILRISKPAGNREKIKNEKESNSGNSLKVTCVKPSPKKLEEEMD
KSYLHPLESQRLKKTSVKSSLDVSNTEHTKLSGTDLEQTHEGKTKEKPKVNIEPHVVKKH
LPSKSTIKVKVQEIPAVAAVQPLSPVTVSAMSEHESTISVVPEASLPVDHPIVSLSSKHL
NESEPATPAPFVPNIAKSRRTSTASAGKSNLSTEDEFDKLIWEISEGKLEAEIDLDPSKD
EDDLLLELSEMIDS
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgtctaatcaaggggaagactgctacttttacttctactccacctgcaccaagggagat
gactgtccgtttcggcactgtgaggctgctgttgggagtgaaactgtatgtactttgtgg
aaagaaggacaatgctttcggcaaatctgcaagtttcgccacatggaaatgaataagaag
cgcagtgagataccttgttattgggaaaaccagccctccggttgtcagaaaggaaattgt
gcttttcatcacaccaagggtcgatttgtggatggtgtttttatgcctccaagcaattca
agcttaccaaaacctgaaccatccacagtggaaccacctacttcccagctctcactgacc
caagtcaagctttcagtggcctccgcaccacagatacgtggggtaaagaagattgaggca
aatgaaaatataccaagtcccacccacccacctgtggtaatcaatgctgcggatgatgat
gaggatgatgatgatctgatttctgaggaaggagatgagatgaaaaacacaggtcaactt
cactcctcttccattgctcatcaagggactcgtattatatcgacacggaattctgcaacc
ccccaaaaaattatcaaagatacttctttgaactttggtattaaaactttggaagaaata
aaactgaaaagacaaaagggagaacaaaattcccaagcagatgctatggatggttcctcc
attcagacagctccaggagaggatatgattgtgcgcactgtttcattctatgcaaaagat
aaatccagtatgtgccttagcttggctcaacgtcttggaaagcgtactgcacctacagag
gaaaacccattggctgattctgttggagaatgtgttccttctgcaaagaaaagcctccat
caaagactgggaaggagaataacaccacatggaataggcattgacgcaaagaaagttcgg
agcccccgacctttaaaagagcgattgggtttacccacagaacaaaacagcgtggaaaca
gagaaggcagccagaccagctcctgagtttcatattaagacactgcaagaaattcagcaa
gagaaagccaatcagaaacaacagcagaaatctgaactcttgccatgcaaaagcaaagtg
actttgaatgcagaaacaggagttgcacctaaaatgcagcccagtctgcacattaagaca
ttttctgaaaaagatgcagagaaaaggcataggcagctgaaagtaaagacacatgtaagc
caagaggaaaaaaaatacaagcttggaagtcatagagatgagatacacaagaatgatcat
ggcaccaagagaccaaggactgaagagcaacaaggtgaagctggaaaggaagtaaatcca
gtaaagaccacactgactgagaatgttcataataaaaaggagatgaagtcagaattaaaa
gggaattatgttgctggcccagttaacttaaaaaggccacattccagtctgtccccaccc
cgtagcagtgcacaggaagctaaaggcacatcccaatccatagaacaagtgcgagtcaaa
actctagaagagattaggcgtgagaaggcacagagactgcagcaagtcagcaagcaagaa
aaaacacaaagtgaagagtctcagccacaaccactatccaaacataagagaattctacga
atctctaaaccagcaggcaacagagaaaaaataaagaatgaaaaagaatcaaattctggc
aattctttgaaggtaacatgtgtcaagccatccccaaagaagcttgaggaggagatggac
aaatcatatttacatcccctagaatcgcagagattaaaaaaaacaagtgttaaatctagt
ctggacgtatccaatacagaacatactaaactatctgggacagatctagagcaaactcat
gaaggcaaaacaaaagaaaagccaaaagtgaacatcgaaccacatgtggttaaaaaacat
ttaccgtccaaaagtacaataaaagtgaaagtacaagaaatccctgcagttgctgctgtg
cagccattgagtcctgtaaccgtgtctgctatgtcagagcatgaatcgacaatatctgta
gttcctgaggcatctctcccagtggaccatccaattgtcagcttgtcgagcaagcatctt
aatgaaagtgagcctgctacacctgcgccatttgtacccaacattgcgaaatcccgaaga
acaagcactgcgtcagcagggaaatcaaatttatctacagaggatgaatttgataaactt
atctgggagatctccgaggggaaattggaggctgaaatcgatcttgacccaagtaaagat
gaagatgatctcctgttagaactatcagaaatgattgacagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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