KEGG   Xenopus laevis (African clawed frog): 380142
Entry
380142            CDS       T01010                                 
Symbol
ncaph.L, brrn1, cap-h
Name
(RefSeq) non-SMC condensin I complex subunit H L homeolog
  KO
K06676  condensin complex subunit 2
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    380142 (ncaph.L)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Chromosome condensation proteins
   Condensin I
    380142 (ncaph.L)
SSDB
Motif
Pfam: Cnd2 CNDH2_N
Other DBs
NCBI-GeneID: 380142
NCBI-ProteinID: NP_001080450
Xenbase: XB-GENE-17333138
UniProt: Q7T0P8
Position
3L:132774083..132790207
AA seq 689 aa
MSTSTPQSGGLRKPATPNSVFLSPATRPQPLSAAGTPTLLNFTSNDDEREKKLRRMSRVI
DLQLSNADSPATAISPAQRGADTPTSLLPKLNNTQISDHYSTCIKLSQENKITTKNAFGL
HLIDYMGDILKHKDSELTNFKVAAGTLDASAKIYAVRVDAVHADVYKVLGGLGKESQATE
GSENQEIDPQDEKKNQKKRKRSYKTIERNLNNINRSETERKSEIDPLFQKTAASFDEFST
AGVFLSTLKCHNYHSELHFDADLRPLSTTEETEPPSPGSIDNTELKPLFLQCVEKRPICP
SLSGFRFMQWNSDAQNKNLSLLMDTFKKSDHVFDINAEVEDDYVESEAPVADDFDADVCD
GMDAGDIGEFAEHREACRSERKGAQQTQIGNGDIGTMCLQLSSCPGEYSYFSPRTMSMWA
GPEHWRFRPRHKTSTDSDQQRVKKAKKVFELNFEDDIDFEVHFRKTRAATTLTKSTLESQ
NKKTTTLPADFHYDPDNIARMSLRPKDRIRKTTVQDFVSEPEDDIGEYDYNNPNDTSNFC
PALQAADSDDESNSAGFSAENQMNITSYGESNLVAEPQKVNKIEIHYAKTAKKMDMKRLK
SSMWSLLVNCPESQEEMPSSKEEIDAALITDERVFSNITHDLQKRLPSVMAQNLSVPLAF
ACLLHLANEKNLKLQGMDDLSDVMIMQDD
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgagtacatcaacacctcaatcaggagggctcagaaagccagcgaccccaaacagtgtt
tttttgtccccagccactagacctcagcccttgagtgcagctggtactcccaccctgctg
aattttaccagcaatgatgatgagcgggaaaagaaacttcggcgtatgtccagggtcatt
gacctgcagcttagcaatgctgattcccctgcaaccgctatttcacctgctcaaagggga
gctgatacgccaacatctctactgcccaaattaaacaacacacagatttcagatcattat
tccacctgcattaagctttctcaggagaataaaataacaactaagaatgcgtttgggttg
cacttgattgattatatgggtgacatcctgaaacataaagacagcgaactaactaacttc
aaagttgccgctgggactctggatgccagtgccaaaatatatgcagtgcgagtcgatgct
gtccatgcagatgtctacaaagtgcttggtggtctaggaaaggaatctcaggcaaccgag
ggatctgaaaaccaggaaatagatcctcaggatgaaaagaagaatcagaagaagaggaag
cgttcatataaaacaatagaaaggaatctgaataacataaaccgttcagaaaccgaacgc
aagagtgagattgacccactcttccagaagacagctgcttcctttgatgaattcagtaca
gccggtgtcttcctctccaccttgaaatgtcataattatcacagcgagttgcactttgat
gcagacttgaggccactttcaaccacagaagagacagaaccacctagtcctggttctatt
gacaatacagaacttaaacccctgtttttacagtgtgtggaaaagcgtccaatatgtcca
tctctctctgggtttcgtttcatgcagtggaacagtgatgcccaaaacaagaacctgtca
ctattaatggatacgtttaagaagagtgaccacgtattcgacatcaatgcagaagtagag
gatgactatgtggagtccgaagctccagtagctgatgattttgatgctgatgtttgtgat
gggatggatgctggagatattggagagtttgctgagcatcgtgaggcttgcaggtccgaa
agaaaaggagcacagcaaactcagattggaaatggagacattggtaccatgtgccttcaa
ctgtcttcatgtccgggggagtattcctattttagccctcgtaccatgtcaatgtgggca
ggtcccgagcactggcgcttccgtccccgtcacaaaaccagcacagactcggaccagcag
agggtcaagaaggcaaagaaagtatttgaattaaattttgaagatgacattgactttgaa
gttcatttccggaaaaccagagcagccactacactcacaaagtctaccctggaaagtcag
aataagaagactactactctgcctgcagactttcattatgatccagacaacattgcgagg
atgagtctaagaccaaaagacaggataagaaagacaactgttcaagactttgtttctgaa
cctgaagatgatattggtgaatatgattacaataatcccaatgatacttccaacttttgc
ccggcccttcaggctgcagacagcgatgatgagtccaacagtgctgggttttctgctgag
aaccagatgaacatcaccagttatggggagtccaatcttgtggcagagccacagaaggtt
aacaaaatagaaattcattatgccaaaacagctaagaagatggacatgaagcgtcttaag
agcagcatgtggagtctgctagttaactgccctgagtcacaggaagagatgcccagttca
aaagaagaaattgacgctgcattaataactgatgagcgagtattcagcaacattacccat
gacttgcaaaaaaggttaccttctgtgatggctcagaatctctcagtccccctggcattt
gcttgtctcttacatttggctaatgaaaagaatttaaaattgcaaggaatggacgatcta
tcggatgtaatgataatgcaagatgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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