KEGG   Xenopus laevis (African clawed frog): 443804
Entry
443804            CDS       T01010                                 
Symbol
trip4.L, trip4
Name
(RefSeq) thyroid hormone receptor interactor 4 L homeolog
  KO
K23398  activating signal cointegrator 1
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    443804 (trip4.L)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Other HDAC associated proteins
     443804 (trip4.L)
SSDB
Motif
Pfam: ASCH zf-C2HC5
Other DBs
NCBI-GeneID: 443804
NCBI-ProteinID: NP_001085378
Xenbase: XB-GENE-974189
UniProt: Q6GQZ5
Position
3L:complement(99928854..99941336)
AA seq 567 aa
MAADLLRWCVEELEKRFGLGVSEDVVRYILSIDTEEEIDEYINDLVQAPEDKKSLFTREL
KLRWQRIRQPSASSTAPAFQRKDGTEDLQTEKLSFGEQGKQRRRKGRNKMEPLQAVYSVA
NTSAEEVKTPMDLAKAQEVVGLSSSKKKQKFVSLYTKEGQDKLTVLIPGRHPCECLAQRH
RLINNCMTCGRIVCEQEGSGPCLFCGNLVCTKEEQDILQRDSNKSQKLRKKLLGSESSAK
DLLPHQETRMKEGLEKALQHRDKLLEYDKTSVRRTHVIDDESDYFATDSNQWLSQAERET
LRMKEQELQELRHASRLSRKFTIDFAGRKVFEERGDLTEYHKQLDDTVQTVNSGTVVPSG
NSRERSNVSSLVNPSLLQPSPVWVDQVSAGSYKKKALSEETNPCSERNRLRIQDRELQEI
SDLGMCLSMHQPWASLLVAGIKQVEGRTWYSAHRGRLWIAAAAKQPSSQEISELETSYRV
LLQKAVQFPKDYPTSCLLGCVDVLDCLSQEQFKEQYPSMNQESGSPFVFICNNPQELLIK
FPIKGQHKIWKLDSKIHQGAKKGLMAR
NT seq 1704 nt   +upstreamnt  +downstreamnt
atggcagctgatctgctgcgctggtgtgtggaggaactggagaagcgttttggactgggc
gtcagtgaagacgtggttaggtatattctatccattgacacagaggaagagattgacgag
tatattaatgacctagtacaggctccagaggataaaaagtctctctttacacgtgaactg
aaactccgatggcagagaatcaggcaaccatctgcttcaagcactgctccagcgttccaa
aggaaagatggaacagaagatttgcagacagagaaactgtcattcggggaacagggtaag
caaagaaggcgcaaaggaaggaacaaaatggagcctcttcaagctgtatattctgtagcc
aatacctctgcggaagaagtaaaaacacccatggatttggcaaaggcgcaggaagttgtg
gggttgtcatcctccaagaagaagcaaaagtttgtcagtctgtacaccaaggaggggcaa
gacaaactgactgtgcttatccctggacgccacccttgcgagtgcttggcacagaggcac
cggcttattaataactgtatgacatgtggccgcattgtttgtgaacaggagggctcaggg
ccgtgtctgttttgtggaaacctggtatgcacaaaggaagagcaagacattttgcagcga
gactcaaataaaagtcaaaaactccgcaagaagcttctaggttcagagtcctctgcaaaa
gaccttctcccccatcaggaaacccgaatgaaagaaggattagagaaagctctgcaacat
cgagacaaactcttagagtatgacaagactagtgtgcggcggactcatgtgattgatgat
gaatctgattacttcgccacggactcaaatcagtggttgtctcaggcggaaagagaaacc
ttgcgaatgaaggaacaggagttgcaggaactgcgtcatgcctctcgcctttctcgtaaa
ttcacaattgattttgcgggaaggaaggtctttgaggaaagaggagatcttacagagtac
cataagcagttggatgatactgtccagacagttaactctggaacagtggtcccttcaggg
aattctagagaaagatcaaacgtttcatctctggtaaatccaagtctactacagccttca
ccagtgtgggtggatcaggttagcgcaggctcatacaagaagaaagctctttcggaggag
acaaacccttgttctgaaagaaaccggctgcggatacaggaccgtgaattacaagagatt
agtgacctaggcatgtgcttgagcatgcaccaaccttgggcttctctacttgttgcaggc
atcaaacaggtagagggaaggacatggtacagtgctcatagaggccgcttgtggatagcg
gctgctgcgaaacaaccttcctcgcaggaaatctctgagctggaaacttcctacagagtg
ttgcttcaaaaagccgtacagtttccaaaagactaccctactagttgtctcctgggttgt
gttgatgtgctcgactgtctgtcacaagagcaattcaaagaacagtatccaagtatgaat
caagaatctggctctccatttgtattcatctgcaacaatccccaagaactgctaattaaa
tttcccattaaaggacagcataagatctggaaactggactccaaaatccaccagggagcc
aaaaaaggtttaatggccagataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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