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Transcription Machinery - Symbiobacterium thermophilum
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E STH3047 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E STH3085 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E STH3084 rpoC; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E STH39 rpoE; RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
E STH1340 rpoZ; RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E STH588 rpoD; RNA polymerase major sigma factor K03086 rpoD; RNA polymerase primary sigma factor
E STH1741 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH1529 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH907 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH845 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH2962 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH2795 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH1051 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH2528 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH2677 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH1152 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH28 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH169 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH181 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH2043 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH2113 conserved domain protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH2002 conserved hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH1175 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH3031 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E STH1958 sigK; RNA polymerase sigma factor similar to B. subtilis SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E STH1812 spoIIAC; RNA polymerase sigma factor similar to B. subtilis sporulation-specific sigma-F K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E STH1221 spoIIGB; RNA polymerase sigma factor similar to B. subtilis SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E STH1222 spoIIIG; RNA polymerase sigma factor similar to B. subtilis SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E STH3113 spo0H; stage 0 sporulation protein H, RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor
E STH1162 RNA polymerase sigma factor K03093 sigI; RNA polymerase sigma-I factor
E STH239 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
E STH2984 fliA; RNA polymerase sigma factor related to flagellar biosynthesis K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E STH1519 nusA; transcriptional termination-antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
E STH1849 transcription termination factor K03625 nusB; transcription antitermination protein NusB
E STH3091 transcriptional antiterminator K02601 nusG; transcription termination/antitermination protein NusG
E STH895 hypothetical protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D Transcription elongation factors
E STH3157 greA2; transcription elongation factor K03624 greA; transcription elongation factor GreA
E STH480 greA1; transcription elongation factor K03624 greA; transcription elongation factor GreA
E STH1744 putative transcription elongation factor K03624 greA; transcription elongation factor GreA
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024