+E Ribosome biogenesis KO
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Ribosome Biogenesis - Thermotoga maritima MSB8
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D TM1102 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C TM0847 conserved hypothetical protein K03595 era; GTPase
C TM0098 conserved hypothetical protein K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C TM1777 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
C TM1765 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
C TM0453 N utilization substance protein G K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D TM0264 16S pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D TM1437 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D TM1512 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D TM1380 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D TM0707 glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TM0872 conserved hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D TM0709 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D TM1576 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D TM1741 conserved hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D TM0844 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D TM1697 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D TM0136 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D TM1715 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D TM1576 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D TM1094 RNA methyltransferase, putative K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D TM0940 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D TM0462 conserved hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TM1538 hypothetical protein K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
B ribosomal protein modification factors
C TM1568 16S rRNA processing protein, putative K02860 rimM; 16S rRNA processing protein RimM
C TM1862 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
C TM1079 ribosomal protein L11 methyltransferase, putative K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C TM1102 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C TM1606 cytoplasmic axial filament protein, putative K08301 rng; ribonuclease G [EC:3.1.26.-]
C TM1545 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C TM1740 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
B rRNA helicases
B GTPases
C TM0847 conserved hypothetical protein K03595 era; GTPase
C TM1717 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C TM1446 conserved hypothetical protein K03977 engA; GTPase
C TM0098 conserved hypothetical protein K03979 obgE; GTPase [EC:3.6.5.-]
C TM0768 conserved hypothetical protein K14540 rbgA; ribosome biogenesis GTPase A
C TM0527 conserved hypothetical protein K03665 hflX; GTPase
C TM0848 conserved hypothetical protein K06948 yqeH; 30S ribosome assembly GTPase
B Other maturation factors
C TM0852 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C TM0729 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C TM0855 ribosome binding factor A K02834 rbfA; ribosome-binding factor A
C TM1778 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
C TM0147 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
C TM1509 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
C TM1607 conserved hypothetical protein K05808 hpf; ribosome hibernation promoting factor
C TM1240 conserved hypothetical protein K06942 ychF; ribosome-binding ATPase
C TM0151 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024