+E Transcription factors KO #

  Transcription Factors - Azotobacter vinelandii DJ

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D Avin_36050 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D Avin_14410 pobR; Transcriptional regulator PobR (AraC family) K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D Avin_20310 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D Avin_42360 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Avin_46280 ada; Methylated-DNA--(protein)-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D Avin_34510 ArgR-like transcriptional regulator, AraC family K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator C LysR family D Avin_38270 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D Avin_13970 metR; transcriptional regulatory protein, MetR (LysR family) K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D Avin_48440 Transcriptional regulator, LysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Avin_23140 cysB; LysR family transcriptional regulator protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D Avin_10390 malonate utilisation transciptional regulator, LysR family K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D Avin_09480 transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D Avin_31220 Transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D Avin_51620 LysR family transcriptional regulator protein K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D Avin_31260 Transcriptional regulator, LysR family K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway D Avin_33850 mexT; Transcriptional regulator MexT K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D Avin_02040 transcriptional regulator, LysR family K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator D Avin_08760 Transcriptional regulator, LysR family K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D Avin_51150 LysR family transcriptional regulator protein K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D Avin_02110 trpI; trpBA operon transcriptional regulator, LysR family; TrpI K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator C DeoR family D Avin_45720 glpR; glycerol-3-phosphate regulon repressor protein GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family D Avin_26190 Bacterial regulatory protein, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Avin_50220 Bacterial regulatory protein, LacI:Periplasmic binding protein/LacI transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Avin_33670 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Avin_26870 ptxS; transcriptional regulator PtxS K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D Avin_12180 fruR; Transcriptional regulator protein, LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D Avin_33920 LacI family transcriptional regulator protein K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D Avin_21780 Transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D Avin_27300 Transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor C GntR family D Avin_43060 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Avin_43340 glcC; transcriptional regulator-like, GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator C TetR/AcrR family D Avin_18450 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Avin_25370 Transcriptional regulatory protein, TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Avin_10080 Transcriptional regulator, TetR family K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon C Lrp/AsnC family D Avin_09960 transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Avin_48000 lrp; leucin responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D Avin_32790 Transcriptional regulator MarR family protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D Avin_15300 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D Avin_10060 cueR; Cu(I)-responsive transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Avin_41410 transcriptional regulatory protein, MerR-family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D Avin_43000 fur; Ferric-uptake regulator, fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Avin_00840 zinc uptake transcriptional regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D Avin_38230 pcaR; Transcriptional regulator PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D Avin_20200 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D Avin_15090 mhpR; Bacterial regulatory protein, IclR family K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator C CRP/FNR family D Avin_46100 crp; catabolite gene activator, c-AMP receptor protein; Crp/Vfr K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Avin_19910 cydR; Fnr-like negative transcriptional regulator of CydAB K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Avin_47010 cooA; Carbon monoxide oxidation transcription regulator, Crp/Fnr family: CooA K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator C Rrf2 family D Avin_40410 iscR; Iron-sulphur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor C ArsR family D Avin_25920 regulatory protein, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Avin_30700 Regulatory protein, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor C XRE family C PadR family C Other families D Avin_15700 hexR-2; transcriptional regulatory protein, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D Avin_02030 hexR-3; transcriptional regulatory protein HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D Avin_27270 hexR-1; transcriptional regulatory protein, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D Avin_06050 birA; Biotin--acetyl-CoA-carboxylase ligase, bifunctional protein, BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Avin_06900 Transcriptional regulator with Fis-type helix-turn-helix motif K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Avin_31920 transcritional regulatior protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D Avin_17260 conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D Avin_34380 fleQ; sigma54-dependent activator protein, FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Avin_20940 acxR; sigma54-dependent activator protein AcxR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Avin_11420 sigma54-dependent activator protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Avin_08020 Sigma54-dependent transcriptional activator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Avin_41690 acoR; Sigma54-dependent transcriptional activator protein, AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Avin_31410 sigma54-dependent activator protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Avin_51080 norR; nitric oxide responsive, sigma54-dependent transcriptional activator protein, NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D Avin_51000 nifA; Nif-specific sigma54-dependent transcriptional activator protein, NifA K02584 nifA; Nif-specific regulatory protein D Avin_49020 anfA; sigma54-dependent transcriptional activator for the iron only nitrogenase, AnfA K02584 nifA; Nif-specific regulatory protein D Avin_02780 vnfA; vanadium nitrogenase sigma54-dependent transcriptional activator, VnfA K02584 nifA; Nif-specific regulatory protein D Avin_43380 cdaR; carbohydrate diacid transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D Avin_22590 Molybdenum-pterin binding domain protein K02019 modE; molybdate transport system regulatory protein D Avin_50680 modE; Mo regulation, Mo processing homeostasis K02019 modE; molybdate transport system regulatory protein D Avin_50690 modG; Mo processing, homeostasis K02019 modE; molybdate transport system regulatory protein D Avin_31050 DNA-binding protein K07726 K07726; putative transcriptional regulator D Avin_31960 transcriptional regulator protein K07726 K07726; putative transcriptional regulator D Avin_48830 Conserved hypothetical protein K07726 K07726; putative transcriptional regulator D Avin_49660 conserved hypothetical protein K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D Avin_13950 putA; Proline dehydrogenase, PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D Avin_34860 BolA-like protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D Avin_52240 parB; chromosome partition ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Avin_15910 rfaH; transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH D Avin_35350 Transcriptional repressor glycine cleavage system-like protein K03567 gcvR; glycine cleavage system transcriptional repressor D Avin_03130 pyrR; pyrimidine biosynthesis regulatory protein, PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Avin_17010 Prophage CP4-57 regulatory, AlpA-like protein K07733 alpA; prophage regulatory protein D Avin_03150 conserved hypothetical protein K07735 algH; putative transcriptional regulator D Avin_22970 RNA polymerase-binding DksA like protein K06204 dksA; RNA polymerase-binding transcription factor D Avin_42640 dksA; RNA polymerase binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D Avin_06700 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR D Avin_13160 mraZ; MraZ-family protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0