+E Replication protein KO
#
DNA Replication Proteins - Bifidobacterium longum subsp. infantis ATCC 15697 (JGI)
%
!
AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D Blon_2190 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
D Blon_0092 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Blon_1145 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Blon_1526 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
D Blon_1239 AAA ATPase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
B DNA Topoisomerases
#
AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D Blon_0679 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Blon_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Blon_0227 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Blon_1995 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Blon_1505 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Blon_0235 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Blon_1791 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E Blon_0817 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E Blon_0808 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E Blon_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E Blon_1249 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E Blon_1015 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E Blon_0175 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E Blon_0741 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E Blon_0160 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RNase H
E Blon_2190 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E Blon_0422 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E Blon_0730 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E Blon_2190 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E Blon_0422 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
C Blon_0007 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C Blon_0966 DNA gyrase/topoisomerase IV, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C Blon_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C Blon_0961 DNA topoisomerase (ATP-hydrolyzing) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C Blon_0173 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022