+D GENES KO
#
KEGG Orthology (KO) - Clostridium botulinum E3
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cbt00010]
D CLH_3146 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLH_1551 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLH_0389 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLH_3087 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLH_0735 phosphofructokinase domain protein K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLH_2300 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLH_2864 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLH_1252 probable fructose-bisphosphate aldolase 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLH_2812 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLH_2814 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLH_2813 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLH_2808 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLH_2806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLH_2569 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_3086 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_0542 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_0877 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLH_3138 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLH_0756 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLH_2077 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLH_2335 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLH_3305 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLH_1998 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLH_1050 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D CLH_2229 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLH_1414 glycosyl hydrolase, family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLH_1430 putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLH_3173 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLH_3174 PTS system, glucose-like IIB component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:cbt00020]
D CLH_0113 putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLH_2401 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CLH_3138 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLH_0277 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLH_0278 fumB; fumarate hydratase, class I K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLH_1897 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CLH_0756 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLH_2077 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cbt00030]
D CLH_0389 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLH_2656 conserved hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D CLH_1174 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLH_3106 transketolase, pyridine binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLH_3107 transketolase, thiamine diphosphate binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLH_3323 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLH_1496 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLH_3324 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLH_1497 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLH_1499 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CLH_0478 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLH_0702 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CLH_1439 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CLH_1495 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CLH_2229 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLH_2023 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLH_0141 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLH_2864 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLH_1252 probable fructose-bisphosphate aldolase 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLH_2300 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLH_3087 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLH_0735 phosphofructokinase domain protein K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cbt00040]
D CLH_2921 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLH_3194 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLH_3014 putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CLH_3015 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CLH_1174 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLH_2708 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D CLH_2693 sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CLH_2995 alcohol dehydrogenase, zinc-dependent K05352 tarJ; ribitol-5-phosphate 2-dehydrogenase (NADP+) [EC:1.1.1.405]
D CLH_2996 putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
C 00051 Fructose and mannose metabolism [PATH:cbt00051]
D CLH_2691 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CLH_3234 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CLH_1550 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLH_2875 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLH_0356 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLH_3209 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLH_3087 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLH_0735 phosphofructokinase domain protein K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLH_2300 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLH_0387 sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D CLH_2045 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CLH_2693 sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CLH_2864 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLH_1252 probable fructose-bisphosphate aldolase 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLH_2812 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLH_0478 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLH_2044 heat-responsive suppressor HrsA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CLH_1314 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CLH_1315 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D CLH_1316 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D CLH_0386 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLH_0384 glucitol/sorbitol-specific phosphotransferase enzyme iib component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLH_0385 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLH_0383 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:cbt00052]
D CLH_1889 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLH_2921 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLH_3194 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLH_2229 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLH_3146 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLH_1551 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLH_2876 pfkB; 1-phosphofructokinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D CLH_3087 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLH_0735 phosphofructokinase domain protein K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLH_2877 class II aldolase, tagatose bisphosphate family K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D CLH_3235 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CLH_0315 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLH_1956 oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLH_0118 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CLH_3330 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CLH_2878 PTS system fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D CLH_2883 PTS system, mannose/fructose/sorbose family, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D CLH_2882 PTS system sorbose-specific iic component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D CLH_2881 PTS system mannose/fructose/sorbose family IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D CLH_2879 AgaS K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:cbt00053]
D CLH_3327 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLH_3019 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLH_3326 PTS sysytem, mannitol-specific enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLH_3017 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLH_3325 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D CLH_3018 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D CLH_3020 metal-dependent hydrolase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D CLH_3014 putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CLH_3015 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:cbt00500]
D CLH_1955 PTS system, glucose-like IIB component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLH_3237 pts system, sucrose-specific iibc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLH_3235 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CLH_0315 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLH_1956 oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLH_2921 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLH_3194 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLH_1417 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLH_1416 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLH_1420 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
D CLH_1414 glycosyl hydrolase, family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLH_1430 putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLH_3162 glgD; glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CLH_3163 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CLH_3166 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CLH_3167 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CLH_3165 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CLH_0914 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CLH_2730 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D CLH_2152 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D CLH_3164 amylopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D CLH_0118 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CLH_3330 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CLH_0913 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CLH_3173 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLH_0316 pts system, iibc component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLH_0317 endonuclease/exonuclease/phosphatase family protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D CLH_1686 treP; pts system, trehalose-specific iibc component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLH_1687 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D CLH_1549 trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D CLH_2229 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLH_3146 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLH_1551 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLH_0389 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLH_2691 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CLH_3234 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cbt00520]
D CLH_1368 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CLH_3173 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLH_0682 nagE; pts system, N-acetylglucosamine-specific iibc component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLH_2885 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CLH_0680 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CLH_0681 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CLH_2691 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CLH_3234 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CLH_0323 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLH_0300 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CLH_0140 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CLH_3346 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLH_0493 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLH_3093 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLH_0481 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLH_3116 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D CLH_2923 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CLH_3117 hexapeptide transferase family protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D CLH_2927 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D CLH_0798 sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CLH_1463 UDP-N-acetylglucosamine 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]
D CLH_1466 spore coat polysaccharide biosynthesis protein SpsE K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D CLH_3174 PTS system, glucose-like IIB component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLH_3146 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLH_1551 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLH_2229 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLH_2921 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLH_3194 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLH_1889 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLH_1314 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CLH_1315 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D CLH_1316 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D CLH_0389 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLH_1550 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLH_2875 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLH_0356 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLH_3209 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLH_1450 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D CLH_3162 glgD; glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CLH_3163 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cbt00620]
D CLH_0756 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLH_2077 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLH_3138 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLH_2339 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLH_1388 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CLH_1998 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLH_1186 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLH_1185 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLH_2569 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_3086 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_0542 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_1090 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLH_1086 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLH_1088 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLH_1089 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLH_0926 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLH_1815 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CLH_1366 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CLH_1050 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D CLH_1310 oxidase, FAD-binding K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D CLH_0350 FAD/FMN-containing dehydrogenase K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D CLH_0349 electron transfer flavoprotein, alpha subunit/FixB family protein K26114 lctC; lactate dehydrogenase (NAD+,ferredoxin) subunit LctC
D CLH_0348 electron transfer flavoprotein, beta subunit/FixA family protein K26115 lctB; lactate dehydrogenase (NAD+,ferredoxin) subunit LctB
D CLH_2335 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLH_3305 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLH_1658 oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D CLH_0967 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CLH_3371 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLH_1897 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CLH_0277 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLH_0278 fumB; fumarate hydratase, class I K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLH_0877 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLH_0482 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLH_1270 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CLH_0112 nifV; homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cbt00630]
D CLH_0113 putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLH_0482 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLH_0997 HAD hydrolase, family IA K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CLH_2782 probable hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CLH_0057 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_0982 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_1018 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLH_3138 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLH_1483 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D CLH_2079 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:cbt00640]
D CLH_1815 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CLH_1366 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CLH_1050 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D CLH_1186 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLH_1185 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLH_3138 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLH_2339 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLH_0362 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1814 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1311 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1090 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLH_1086 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLH_1088 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLH_1089 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLH_2335 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLH_3305 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLH_0556 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D CLH_0952 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLH_1658 oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D CLH_1935 dhaT; 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
D CLH_1846 ethanolamine utilization protein EutE K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:cbt00650]
D CLH_0482 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLH_0365 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLH_0361 crt; 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CLH_1816 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CLH_0362 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1814 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1311 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1917 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLH_1916 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLH_0297 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D CLH_0296 ptb; phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D CLH_1388 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CLH_1998 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLH_2278 bdhA; NADH-dependent butanol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D CLH_2339 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLH_0756 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLH_2077 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLH_3025 thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0307 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0692 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0691 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLH_0302 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLH_0625 oxidoreductase, zinc-binding dehydrogenase family K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:cbt00660]
D CLH_3025 thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0307 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0692 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0691 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLH_0302 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLH_0303 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CLH_0304 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CLH_0305 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cbt00562]
D CLH_1256 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CLH_0656 putative oxidoreductase YgjR K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D CLH_1257 inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D CLH_1255 probable malonic semialdehyde oxidative decarboxylase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D CLH_1254 myo-inositol catabolism protein IolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D CLH_1253 protein IolC K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D CLH_2812 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cbt00190]
D CLH_2052 putative iron hydrogenase, gamma subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CLH_2051 putative iron hydrogenase, electron-transfer subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CLH_2050 hydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CLH_0488 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CLH_0490 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLH_0489 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLH_0487 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLH_0491 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLH_0484 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLH_0486 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CLH_0485 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLH_2589 ntpA; V-type sodium ATPase, catalytic A subunit K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D CLH_2588 ntpB; V-type sodium ATPase, B subunit K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D CLH_2591 ntpC; V-type sodium ATPase, C subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D CLH_2587 ntpD; V-type sodium ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D CLH_2592 ntpE; V-type sodium ATPase, E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D CLH_2590 ntpG; V-type sodium ATPase, G subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D CLH_2595 putative V-type ATPase subunit K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D CLH_2594 ntpI; V-type sodium ATPase, I subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D CLH_2593 ntpK; V-type sodium ATPase, K subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D CLH_0834 putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cbt00680]
D CLH_1018 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLH_2806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLH_2864 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLH_1252 probable fructose-bisphosphate aldolase 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLH_2300 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLH_3087 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLH_0735 phosphofructokinase domain protein K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CLH_1638 mch; methenyltetrahydromethanopterin cyclohydrolase K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27]
D CLH_1186 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLH_1185 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLH_2808 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLH_3217 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLH_0068 putative 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:cbt00910]
D CLH_0860 ferredoxin-nitrite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D CLH_0704 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CLH_1631 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CLH_0530 oxidoreductase, 2-nitropropane dioxygenase family K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CLH_0745 gluD; glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CLH_0057 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_0982 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_0984 gltA; glutamate synthase, NADPH, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CLH_2800 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLH_2956 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLH_0985 gltD; glutamate synthase, NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLH_0627 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLH_0585 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLH_0330 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cbt00920]
D CLH_1226 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CLH_2792 asrA; sulfite reductase, subunit A K16950 asrA; anaerobic sulfite reductase subunit A
D CLH_0660 asrA; sulfite reductase, subunit A K16950 asrA; anaerobic sulfite reductase subunit A
D CLH_2791 asrB; sulfite reductase, subunit B K16951 asrB; anaerobic sulfite reductase subunit B
D CLH_0661 asrB; sulfite reductase, subunit B K16951 asrB; anaerobic sulfite reductase subunit B
D CLH_2790 asrC; sulfite reductase, subunit C K00385 asrC; anaerobic sulfite reductase subunit C
D CLH_0662 asrC; sulfite reductase, subunit C K00385 asrC; anaerobic sulfite reductase subunit C
D CLH_2827 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLH_2828 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLH_1484 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLH_2655 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cbt00061]
D CLH_1090 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLH_1086 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLH_1088 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLH_1089 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLH_1190 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CLH_1081 acyl carrier protein K02078 acpP; acyl carrier protein
D CLH_1083 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLH_0634 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLH_1080 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLH_1085 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLH_1021 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLH_1084 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLH_1093 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLH_1087 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLH_1082 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cbt00071]
D CLH_0482 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLH_0362 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1814 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1311 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1998 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cbt00561]
D CLH_2079 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLH_0093 dhaK; dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D CLH_0094 dhaL; dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D CLH_0095 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D CLH_0952 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLH_0977 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CLH_1189 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CLH_2825 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLH_3257 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLH_0872 diacylglycerol kinase/PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CLH_3072 lipA; triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D CLH_3074 lipase 2 K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D CLH_3073 putative lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D CLH_0470 putative monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLH_3150 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLH_3151 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLH_0441 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLH_1942 coenzyme B12-dependent glycerol dehydratase, large subunit K06120 dhaB; glycerol dehydratase large subunit [EC:4.2.1.30]
D CLH_1941 propanediol utilization: dehydratase, medium subunit K06121 dhbC; glycerol dehydratase medium subunit [EC:4.2.1.30]
D CLH_1940 coenzyme B12-dependent glycerol dehydratase, small subunit K06122 dhbE; glycerol dehydratase small subunit [EC:4.2.1.30]
D CLH_1935 dhaT; 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
C 00564 Glycerophospholipid metabolism [PATH:cbt00564]
D CLH_1155 NAD-dependent glycerol-3-phosphate dehydrogenase family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CLH_0978 glycerol-3-phosphate dehydrogenase, glpa K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CLH_2825 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLH_3257 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLH_0872 diacylglycerol kinase/PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CLH_1862 lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily K01048 pldB; lysophospholipase [EC:3.1.1.5]
D CLH_2056 lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily K01048 pldB; lysophospholipase [EC:3.1.1.5]
D CLH_3335 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLH_1677 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLH_0655 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLH_1214 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CLH_2833 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CLH_0032 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CLH_1237 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CLH_2895 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CLH_2054 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CLH_2709 glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:cbt00600]
D CLH_1368 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D CLH_0443 putative esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cbt00230]
D CLH_1262 nudix-family hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLH_1495 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CLH_2229 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLH_2023 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLH_0141 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLH_1040 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLH_1044 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CLH_1042 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLH_1037 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CLH_1041 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CLH_1038 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CLH_1039 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CLH_1243 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLH_1043 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLH_0964 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLH_1664 2,3-cyclic-nucleotide 2'phosphodiesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CLH_2586 nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CLH_2744 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLH_3246 kinase, PfkB family K22026 K22026; nucleoside kinase [EC:2.7.1.73 2.7.1.213 2.7.1.-]
D CLH_1894 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLH_2721 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLH_1498 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLH_1145 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLH_0938 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CLH_0164 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CLH_0376 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLH_0927 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CLH_0404 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CLH_1899 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CLH_0597 putative xanthine dehydrogenase, molybdopterin-binding subunit K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D CLH_0598 putative xanthine dehydrogenase, FAD-binding subunit K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D CLH_0599 putative xanthine dehydrogenase, iron-sulfur binding subunit K13480 ygeU; xanthine dehydrogenase iron-sulfur-binding subunit
D CLH_0377 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CLH_0596 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CLH_1162 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CLH_0284 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLH_0285 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CLH_0111 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLH_0879 deoxynucleotide triphosphohydrolase family protein K01129 dgt; dGTPase [EC:3.1.5.1]
D CLH_0965 putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLH_2329 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CLH_2906 RelA/spoT family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CLH_1890 GTP-pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CLH_2367 conserved hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CLH_2874 adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D CLH_3370 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLH_1323 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CLH_2745 2`,3`-cyclic-nucleotide 2`-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CLH_0258 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLH_0592 conserved hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D CLH_0585 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:cbt00240]
D CLH_0790 ATP-grasp domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLH_0055 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLH_0054 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLH_2347 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLH_2346 aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLH_2345 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CLH_2342 pyrD; dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CLH_0590 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CLH_2343 pyrK; dihydroorotate dehydrogenase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CLH_2341 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CLH_2344 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CLH_1211 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CLH_0927 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CLH_0546 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CLH_0468 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CLH_1768 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CLH_2861 putative threonyl-tRNA synthetase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CLH_0992 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CLH_1664 2,3-cyclic-nucleotide 2'phosphodiesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CLH_2586 nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CLH_2744 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLH_1493 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D CLH_3244 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D CLH_0479 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLH_2196 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLH_2745 2`,3`-cyclic-nucleotide 2`-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CLH_0703 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D CLH_3246 kinase, PfkB family K22026 K22026; nucleoside kinase [EC:2.7.1.73 2.7.1.213 2.7.1.-]
D CLH_2722 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CLH_0111 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLH_2400 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CLH_0284 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLH_0285 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CLH_0480 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLH_0196 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CLH_0729 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CLH_0472 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D CLH_3227 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CLH_2061 hypothetical oxidoreductase YeiT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D CLH_2060 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLH_0593 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cbt00250]
D CLH_0758 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLH_3045 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLH_2772 putative L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CLH_1158 ansA; L-asparaginase, type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CLH_2334 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CLH_2310 conserved domain protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLH_1324 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLH_2865 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLH_2866 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLH_3370 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLH_1243 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLH_2347 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLH_2346 aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLH_0984 gltA; glutamate synthase, NADPH, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CLH_2800 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLH_2956 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLH_0985 gltD; glutamate synthase, NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLH_0627 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLH_0745 gluD; glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CLH_0057 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_0982 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_0790 ATP-grasp domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLH_0055 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLH_0054 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLH_0323 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLH_1040 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cbt00260]
D CLH_0981 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLH_1233 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLH_2255 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLH_0975 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLH_2638 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CLH_2639 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLH_1018 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLH_2079 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLH_2808 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLH_3217 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLH_3138 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLH_2833 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CLH_2859 sdaAA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLH_2860 sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLH_1007 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CLH_3241 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CLH_1805 trpB; tryptophan synthase, beta subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cbt00270]
D CLH_2827 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLH_2828 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLH_1484 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLH_2581 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLH_0507 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CLH_0945 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLH_0947 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CLH_3183 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CLH_1145 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLH_1896 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D CLH_2487 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLH_2583 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLH_0981 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLH_1233 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLH_2255 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLH_0975 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLH_2655 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CLH_0332 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CLH_1022 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLH_0760 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLH_1518 gshAB; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CLH_0758 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLH_3045 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLH_2335 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLH_3305 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLH_2859 sdaAA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLH_2860 sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLH_3217 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:cbt00280]
D CLH_1022 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLH_0760 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLH_3138 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLH_0362 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1814 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1311 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_2441 putative 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLH_0482 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cbt00290]
D CLH_1007 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CLH_0303 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CLH_0304 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CLH_0305 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CLH_3025 thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0307 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0692 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0691 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLH_0302 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLH_0308 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLH_0306 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLH_1022 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLH_0760 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLH_1270 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cbt00300]
D CLH_0975 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLH_0981 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLH_1233 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLH_2255 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLH_2256 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLH_3270 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLH_2257 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLH_2265 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CLH_2870 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CLH_2193 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLH_3039 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CLH_2749 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D CLH_2210 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLH_2209 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cbt00310]
D CLH_3138 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLH_0482 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLH_1917 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLH_1916 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:cbt00220]
D CLH_2871 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CLH_2865 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLH_2866 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLH_0057 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_0982 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_0745 gluD; glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CLH_0585 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLH_0758 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLH_3045 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLH_2868 argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CLH_2869 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CLH_2867 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CLH_2870 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cbt00330]
D CLH_0946 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CLH_0951 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D CLH_0947 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CLH_0945 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLH_0949 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLH_2376 spermine/spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CLH_1426 spermine/spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CLH_3372 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CLH_0046 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CLH_0047 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CLH_0758 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLH_3045 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cbt00340]
D CLH_2631 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CLH_2632 hisZ; ATP phosphoribosyltransferase, regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CLH_2623 hisE; phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CLH_2624 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CLH_2626 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CLH_2627 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CLH_2625 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CLH_2628 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CLH_2629 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLH_2622 hisJ; histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CLH_2953 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CLH_2630 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:cbt00350]
D CLH_0758 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLH_3045 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLH_2629 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLH_1998 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:cbt00360]
D CLH_0365 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLH_0758 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLH_3045 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLH_2629 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLH_1313 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:cbt00380]
D CLH_3138 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLH_0482 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLH_1313 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cbt00400]
D CLH_2887 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CLH_2894 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CLH_2893 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CLH_0667 aroD; 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D CLH_2028 aroD; 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D CLH_2888 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CLH_2892 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CLH_2891 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CLH_2753 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CLH_3241 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CLH_1805 trpB; tryptophan synthase, beta subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CLH_2890 chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CLH_2637 putative ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D CLH_2886 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CLH_0758 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLH_3045 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLH_2629 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cbt00410]
D CLH_1682 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLH_1681 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CLH_2061 hypothetical oxidoreductase YeiT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D CLH_2060 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLH_0593 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLH_0362 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1814 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLH_1311 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cbt00430]
D CLH_1185 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLH_1186 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cbt00450]
D CLH_2581 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLH_0734 cysteine desulphurase, SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CLH_2301 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLH_2952 pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLH_0206 putative thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLH_0607 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLH_0096 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cbt00460]
D CLH_1158 ansA; L-asparaginase, type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CLH_2334 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CLH_1018 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cbt00470]
D CLH_1486 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLH_2823 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLH_0648 putative D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D CLH_0650 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D CLH_0058 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLH_0181 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLH_2193 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLH_3039 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cbt00480]
D CLH_1518 gshAB; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CLH_0543 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLH_2401 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CLH_3329 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D CLH_0947 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:cbt00511]
D CLH_1368 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:cbt00540]
D CLH_2223 O-antigen polymerase family K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cbt00541]
D CLH_2921 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLH_3194 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLH_1889 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLH_3004 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLH_3198 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLH_3002 rfbB_1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLH_3195 rfbB_2; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLH_3003 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLH_3197 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLH_3214 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLH_3000 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLH_3196 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLH_1550 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLH_2875 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLH_0356 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLH_3209 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLH_1450 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D CLH_0140 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CLH_0481 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLH_0798 sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CLH_3116 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D CLH_2923 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CLH_3117 hexapeptide transferase family protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D CLH_2927 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:cbt00550]
D CLH_3346 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLH_0493 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLH_3093 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLH_0137 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLH_0181 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLH_2210 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLH_2823 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLH_2209 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLH_1213 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLH_2653 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLH_2348 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLH_3231 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLH_2208 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLH_0754 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLH_0936 membrane carboxypeptidase MrcB K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLH_0551 penicillin-binding Protein dimerisation domain family K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLH_2211 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLH_3095 penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D CLH_2096 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLH_2091 putative serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLH_0571 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLH_2351 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CLH_2352 glutamine amidotransferase, CobB/CobQ family K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cbt00552]
D CLH_2348 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLH_3231 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLH_2227 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CLH_0648 putative D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D CLH_0650 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D CLH_0649 protein DltB K03739 dltB; membrane protein involved in D-alanine export
D CLH_0646 putative protein dltD K03740 dltD; D-alanine transfer protein
D CLH_0569 membrane-bound protein LytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLH_2994 glycosyl transferase, group 2 family protein K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
D CLH_0470 putative monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLH_3150 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLH_3151 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLH_0441 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLH_2931 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cbt00543]
D CLH_2990 membrane-bound O-acyltransferase family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CLH_2827 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cbt00730]
D CLH_2857 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CLH_1120 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_2635 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_1927 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_2634 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CLH_1823 putative thiazole biosynthesis protein K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CLH_2166 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLH_1360 putative 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLH_2856 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLH_2855 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CLH_0592 conserved hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D CLH_1173 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLH_1175 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CLH_0258 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLH_1337 tena/thi-4 family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:cbt00740]
D CLH_1248 riboflavin biosynthesis protein ribAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CLH_1246 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CLH_1249 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CLH_1247 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CLH_1228 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CLH_2856 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLH_1262 nudix-family hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:cbt00750]
D CLH_2950 pyridoxine kinase family protein K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CLH_2639 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cbt00760]
D CLH_2772 putative L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CLH_2773 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CLH_2771 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CLH_2606 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CLH_1894 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLH_2721 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLH_1498 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLH_1664 2,3-cyclic-nucleotide 2'phosphodiesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CLH_2586 nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CLH_2744 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLH_0567 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CLH_1023 nadE; glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CLH_3144 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CLH_3136 NAD-dependent deacetylase, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CLH_2164 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cbt00770]
D CLH_3025 thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0307 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0692 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLH_0691 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLH_0302 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLH_0308 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLH_0306 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLH_1680 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CLH_1071 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CLH_1681 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CLH_0167 coaX; pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CLH_1164 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CLH_1181 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CLH_2396 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CLH_3112 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CLH_1022 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLH_0760 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLH_2061 hypothetical oxidoreductase YeiT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D CLH_2060 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLH_0593 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLH_1682 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:cbt00780]
D CLH_1085 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLH_1021 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLH_1084 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLH_1093 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLH_1087 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLH_0686 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CLH_0344 radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLH_0685 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLH_2333 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cbt00785]
D CLH_3137 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CLH_3138 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00790 Folate biosynthesis [PATH:cbt00790]
D CLH_3228 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CLH_2272 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CLH_1248 riboflavin biosynthesis protein ribAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CLH_2702 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D CLH_1101 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CLH_1100 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CLH_0610 molybdopterin-guanine dinucleotide biosynthesis protein A K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CLH_1098 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
C 00670 One carbon pool by folate [PATH:cbt00670]
D CLH_3228 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CLH_0166 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CLH_2170 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CLH_2222 methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CLH_1018 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLH_1042 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLH_1043 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLH_1167 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLH_2581 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLH_3227 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CLH_2584 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CLH_0331 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cbt00860]
D CLH_2651 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CLH_2646 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CLH_2647 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CLH_2649 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CLH_2648 uroporphyrinogen III synthase/methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CLH_2650 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D CLH_2685 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CLH_2645 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CLH_2679 cobI; precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D CLH_2676 cobJ; precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D CLH_2678 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CLH_2677 CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D CLH_2675 cobK; precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CLH_2682 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D CLH_2680 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D CLH_2681 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D CLH_2683 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CLH_2684 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CLH_2667 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CLH_2659 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CLH_2662 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CLH_2666 conserved hypothetical protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CLH_2664 conserved hypothetical protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CLH_2665 cobS; cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CLH_2674 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CLH_2663 phosphoglycerate mutase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cbt00130]
D CLH_2696 flavodoxin K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cbt00900]
D CLH_2166 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLH_1360 putative 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLH_1216 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CLH_0214 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CLH_0463 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CLH_0338 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CLH_1218 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CLH_1767 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D CLH_0482 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLH_2167 putative geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLH_1213 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLH_2653 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cbt00906]
D CLH_1671 phytoene dehydrogenase family protein K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CLH_3106 transketolase, pyridine binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLH_3107 transketolase, thiamine diphosphate binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLH_3323 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLH_1496 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLH_3324 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLH_1497 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cbt00523]
D CLH_3004 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLH_3198 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLH_3002 rfbB_1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLH_3195 rfbB_2; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLH_3003 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLH_3197 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLH_3214 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLH_3000 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLH_3196 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D CLH_3002 rfbB_1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLH_3195 rfbB_2; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:cbt00311]
D CLH_2377 penicillin acylase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D CLH_2558 conserved hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:cbt00332]
D CLH_0046 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CLH_0047 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cbt00261]
D CLH_0981 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLH_1233 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLH_2255 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLH_2256 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLH_3270 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLH_2257 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cbt00521]
D CLH_3146 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLH_1551 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLH_2229 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLH_1256 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CLH_3004 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLH_3198 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLH_3002 rfbB_1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLH_3195 rfbB_2; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLH_3003 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLH_3197 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLH_3214 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLH_3000 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLH_3196 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CLH_3146 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLH_1551 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cbt00525]
D CLH_3004 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLH_3198 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLH_3002 rfbB_1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLH_3195 rfbB_2; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cbt00401]
D CLH_2886 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CLH_0758 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLH_3045 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLH_2629 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D CLH_1083 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLH_1021 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLH_1084 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLH_1093 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CLH_1190 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CLH_1081 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D CLH_0507 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cbt00362]
D CLH_0365 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLH_0482 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:cbt00627]
D CLH_0926 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CLH_1917 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLH_1916 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cbt00625]
D CLH_1998 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLH_1516 probable aldehyde dehydrogenase AldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D CLH_1596 hupL; [Ni/Fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CLH_1595 hupS; [Ni/Fe] hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D CLH_1815 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CLH_1366 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cbt00626]
D CLH_1998 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cbt03020]
D CLH_0230 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLH_0231 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLH_0266 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLH_1163 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cbt03010]
D CLH_0541 putative 30S ribosomal protein S1 homolog K02945 RP-S1; small subunit ribosomal protein S1
D CLH_1767 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D CLH_1209 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CLH_0243 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CLH_0265 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLH_0254 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CLH_3381 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CLH_0233 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CLH_0251 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLH_0273 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CLH_0236 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CLH_0264 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLH_0232 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CLH_0263 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLH_0250 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CLH_1229 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CLH_1197 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CLH_0246 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CLH_3379 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CLH_0241 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CLH_0850 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CLH_0866 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CLH_0227 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CLH_0240 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CLH_0237 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CLH_0238 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CLH_0249 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CLH_0252 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CLH_0229 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLH_3376 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CLH_0228 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CLH_0226 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CLH_0272 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CLH_0247 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CLH_0256 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CLH_0244 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CLH_0267 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CLH_0253 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CLH_1201 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CLH_2247 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CLH_0562 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CLH_0242 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CLH_0239 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLH_0248 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CLH_2024 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLH_2025 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLH_0564 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CLH_1176 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CLH_0245 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CLH_0255 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CLH_0471 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CLH_1188 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLH_0223 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CLH_3398 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CLH_2248 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CLH_0262 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CLH_0008 rrsI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3282 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3292 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3288 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3310 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3296 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3172 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_0183 rrsJ; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3278 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_0430 rrsK; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3161 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3170 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3290 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3286 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3308 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3280 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3276 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_0010 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3294 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3159 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_0187 rrlJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_0433 rrlK; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3158 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3169 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3307 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_0011 rrfI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3130 rrfM; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_0188 rrfJ; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3285 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3293 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3289 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3302 rrfN; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3275 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3279 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cbt00970]
D CLH_0013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLH_0184 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLH_3156 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLH_0409 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_0412 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_1556 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_1553 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_0426 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_3254 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_0172 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLH_0173 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLH_0174 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLH_0434 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLH_3355 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLH_3359 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLH_3363 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLH_0190 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLH_1834 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLH_0414 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLH_0421 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLH_2689 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLH_3357 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLH_3361 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLH_3365 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLH_0407 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0418 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0411 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0417 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0424 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0425 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0413 tRNA-His K14226 tRNA-His; tRNA His
D CLH_0420 tRNA-His K14226 tRNA-His; tRNA His
D CLH_0185 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLH_0431 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLH_0155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_0158 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_0161 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_0416 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_0423 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_2524 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_3306 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_0419 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_0415 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_1557 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_0422 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_3301 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_1554 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_3157 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_0157 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_0160 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_0156 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_0159 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_1017 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_0189 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLH_3129 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLH_0406 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLH_0410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLH_0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLH_0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLH_0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLH_0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLH_3230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLH_0221 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLH_0502 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLH_3358 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLH_3362 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLH_0505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLH_0527 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLH_0529 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLH_0500 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLH_0506 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLH_0503 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLH_0501 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLH_3356 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLH_3364 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLH_3360 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLH_0504 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLH_2322 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CLH_0398 glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLH_0399 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLH_0397 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLH_1125 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLH_1843 dhha1 domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLH_0970 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLH_0134 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLH_0180 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLH_0333 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLH_1565 threonyl-tRNA synthetase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLH_0018 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLH_0216 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLH_0096 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLH_1167 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLH_2274 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLH_2897 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLH_0078 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLH_0171 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLH_2328 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLH_0215 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLH_0969 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLH_2242 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLH_2241 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLH_2913 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLH_1895 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLH_2918 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cbt03060]
D CLH_0257 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLH_0224 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLH_2805 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLH_0962 protein export protein SecD K12257 secDF; SecD/SecF fusion protein
D CLH_0960 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLH_3396 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLH_0512 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLH_1196 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLH_3455 srpB; Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D CLH_1194 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLH_2411 putative arsenite-transporting ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CLH_2555 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLH_3037 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLH_3038 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLH_3299 putative membrane protein K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cbt04122]
D CLH_1120 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_2635 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_1927 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_1122 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLH_1101 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CLH_1100 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CLH_2634 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cbt03018]
D CLH_2806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLH_1230 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLH_3339 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CLH_2803 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLH_3258 ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_1287 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_1286 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_1397 cold-shock deAd box protein a K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_2071 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLH_2841 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLH_0469 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CLH_1239 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CLH_1130 RNA-metabolising metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLH_1503 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLH_3087 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLH_0858 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLH_0374 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLH_1691 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cbt03030]
D CLH_1583 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLH_2336 exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLH_3088 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLH_1219 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLH_3226 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLH_0198 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLH_0849 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLH_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLH_3374 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLH_0880 putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLH_3380 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLH_3114 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CLH_1203 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLH_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLH_0395 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cbt03410]
D CLH_0367 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLH_2824 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLH_3126 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CLH_0116 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CLH_1864 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CLH_0676 AP endonuclease, family 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLH_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLH_0750 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLH_0395 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cbt03420]
D CLH_0144 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLH_3098 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLH_3099 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CLH_3094 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CLH_0394 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_3034 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_2605 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_2579 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLH_0395 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cbt03430]
D CLH_1684 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CLH_2231 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLH_1633 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLH_1689 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CLH_0394 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_3034 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_2605 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_2579 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_2169 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CLH_2168 conserved domain protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLH_0750 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLH_3380 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLH_3114 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CLH_3088 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLH_1219 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLH_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLH_3226 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLH_0849 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLH_0198 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLH_1583 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLH_2336 exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLH_0395 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLH_2099 DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:cbt03440]
D CLH_0750 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLH_3380 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLH_3114 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CLH_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLH_0874 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CLH_3224 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CLH_1238 recA; protein RecA K03553 recA; recombination protein RecA
D CLH_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLH_0956 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CLH_0957 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLH_1179 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLH_0508 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLH_3088 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLH_1219 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLH_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLH_3226 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLH_0849 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLH_0198 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLH_1583 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLH_2336 exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLH_1165 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cbt02010]
D CLH_2797 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLH_1318 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLH_2798 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CLH_1319 putative membrane protein K02018 modB; molybdate transport system permease protein
D CLH_1320 spermidine/putrescine import ATP-binding protein PotA K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLH_2799 putrescine transport ATP-binding protein PotG K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLH_1877 periplasmic-iron-binding protein BitA K02012 afuA; iron(III) transport system substrate-binding protein
D CLH_1067 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CLH_0372 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CLH_0928 potD; spermidine/putrescine-binding periplasmic protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLH_0929 spermidine/putrescine transport system permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D CLH_0930 potB; spermidine/putrescine ABC transporter, permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D CLH_0931 spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLH_2668 glycine betaine/carnitine/choline transport system permease protein opucb K05845 opuC; osmoprotectant transport system substrate-binding protein
D CLH_2669 glycine betaine/L-proline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLH_1344 glycine betaine/carnitine/choline transport ATP-binding protein opuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLH_0910 multiple sugar-binding transport ATP-binding protein MsmK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLH_0119 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CLH_0120 ABC-type sugar transport system, permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D CLH_0121 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D CLH_2726 lipoprotein, bmp family K07335 bmpA; basic membrane protein A and related proteins
D CLH_3251 putative membrane protein K07335 bmpA; basic membrane protein A and related proteins
D CLH_2724 sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D CLH_3249 sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D CLH_3248 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D CLH_2723 sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D CLH_3250 ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D CLH_2725 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CLH_1443 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CLH_1442 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D CLH_1441 ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLH_1440 high affinity ribose transport protein RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D CLH_2291 D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D CLH_1148 periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLH_1149 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CLH_1150 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CLH_1151 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLH_3033 amino acid ABC transporter K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CLH_3032 amino acid ABC transporter, amino acid-binding/permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D CLH_3031 glutamine transport ATP-binding protein GlnQ K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CLH_2258 oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_2263 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_0401 putative extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_2262 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D CLH_2261 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CLH_2260 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D CLH_2259 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D CLH_0534 periplasmic solute binding protein family K09815 znuA; zinc transport system substrate-binding protein
D CLH_0738 putative metal ion ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CLH_0739 putative metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLH_0615 cobalt/cobalamin transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D CLH_0614 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLH_1576 cobalamin K02007 cbiM; cobalt/nickel transport system permease protein
D CLH_0612 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLH_1577 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLH_0613 cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLH_1578 cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLH_2563 BioY protein K03523 bioY; biotin transport system substrate-specific component
D CLH_0684 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CLH_0270 cobalt transport permease, CbiQ family K16785 ecfT; energy-coupling factor transport system permease protein
D CLH_0268 cobalt import ATP-binding protein CbiO 3 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLH_0269 cobalt import ATP-binding protein CbiO 2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLH_2999 O-antigen export system ATP-binding protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D CLH_2998 O-antigen export system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CLH_1055 ABC transporter, permease component K11632 bceB; bacitracin transport system permease protein
D CLH_1056 bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein
D CLH_2010 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLH_2009 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
D CLH_2011 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLH_2845 ABC-type antimicrobial peptide transport system, permease component K19084 braE; bacitracin transport system permease protein
D CLH_2846 bacitracin export ATP-binding protein BceA K19083 braD; bacitracin transport system ATP-binding protein
D CLH_3102 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein
D CLH_3103 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLH_1526 putative membrane protein K16919 ytrC_D; acetoin utilization transport system permease protein
D CLH_1525 ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D CLH_0688 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_0311 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_2705 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_0310 ABC-type multidrug/protein/lipid transport system, ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_0689 lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_2704 lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_1590 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cbt02060]
D CLH_0286 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLH_1241 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D CLH_3174 PTS system, glucose-like IIB component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLH_3173 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLH_0682 nagE; pts system, N-acetylglucosamine-specific iibc component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLH_0316 pts system, iibc component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLH_1955 PTS system, glucose-like IIB component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLH_3237 pts system, sucrose-specific iibc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLH_2694 phosphotransferase system, EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLH_1429 PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLH_1686 treP; pts system, trehalose-specific iibc component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLH_1417 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLH_1416 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLH_1420 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
D CLH_1314 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CLH_1315 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D CLH_1316 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D CLH_2878 PTS system fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D CLH_2883 PTS system, mannose/fructose/sorbose family, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D CLH_2882 PTS system sorbose-specific iic component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D CLH_2881 PTS system mannose/fructose/sorbose family IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D CLH_0386 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLH_0384 glucitol/sorbitol-specific phosphotransferase enzyme iib component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLH_0385 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLH_0383 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CLH_3327 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLH_3019 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLH_3326 PTS sysytem, mannitol-specific enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLH_3017 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLH_3325 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D CLH_3018 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D CLH_2044 heat-responsive suppressor HrsA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CLH_2045 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cbt03070]
D CLH_0962 protein export protein SecD K12257 secDF; SecD/SecF fusion protein
D CLH_0224 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLH_2805 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLH_0257 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLH_0960 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLH_3396 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLH_0512 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLH_1194 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLH_1196 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cbt02020]
D CLH_1147 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLH_2391 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLH_1146 alkaline phosphatase synthesis transcriptional regulatory proteinphoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLH_1064 phoP; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLH_2761 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLH_1422 two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLH_0369 alkaline phosphatase synthesis transcriptional regulatory proteinphoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLH_1148 periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLH_0448 trypsin domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D CLH_3179 flagellin K02406 fliC; flagellin
D CLH_0784 flagellin K02406 fliC; flagellin
D CLH_0786 flagellin K02406 fliC; flagellin
D CLH_0803 flagellin K02406 fliC; flagellin
D CLH_0829 RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA
D CLH_3304 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLH_0818 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLH_0918 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CLH_0919 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CLH_0915 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CLH_0916 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CLH_0917 kdpC; K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CLH_2298 transcriptional regulatory protein ResD K07775 resD; two-component system, OmpR family, response regulator ResD
D CLH_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLH_1056 bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein
D CLH_1055 ABC transporter, permease component K11632 bceB; bacitracin transport system permease protein
D CLH_2845 ABC-type antimicrobial peptide transport system, permease component K19084 braE; bacitracin transport system permease protein
D CLH_2846 bacitracin export ATP-binding protein BceA K19083 braD; bacitracin transport system ATP-binding protein
D CLH_2847 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLH_2848 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CLH_0648 putative D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D CLH_0649 protein DltB K03739 dltB; membrane protein involved in D-alanine export
D CLH_0650 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D CLH_0646 putative protein dltD K03740 dltD; D-alanine transfer protein
D CLH_0072 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLH_0071 DNA-binding response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D CLH_2299 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLH_2822 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLH_2007 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLH_2008 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLH_2011 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLH_2010 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLH_2009 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
D CLH_2160 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLH_3371 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLH_0707 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLH_1354 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLH_1355 putative lipoprotein K07800 agrD; AgrD protein
D CLH_0710 two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLH_1068 hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D CLH_0777 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CLH_3180 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CLH_0057 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_0982 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_0090 sigma54 dependent transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D CLH_1917 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLH_1916 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLH_1364 short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D CLH_0482 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLH_2816 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLH_3053 prepilin peptidase-dependent K02650 pilA; type IV pilus assembly protein PilA
D CLH_1595 hupS; [Ni/Fe] hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CLH_1596 hupL; [Ni/Fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CLH_0765 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLH_2415 membrane associated methyl-accepting chemotaxis protein with hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0045 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0628 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0697 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2746 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1607 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1655 membrane-associated methyl-accepting chemotaxis protein with hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0953 putative membrane-associated methyl-accepting chemotaxis protein fused to hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1004 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1876 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1795 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1997 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2362 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2898 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2954 membrane assosiated methyl-accepting chemotaxis protein with hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2955 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2971 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_3030 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2786 methyl-accepting chemotaxis sensory protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2919 putative membrane-associated methyl-accepting chemotaxis protein fused to hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2567 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0762 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLH_0769 chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLH_0766 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLH_0768 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLH_0764 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLH_1474 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLH_0663 CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLH_1943 DNA-bindng response regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D CLH_1660 transcriptional regulatory protein K07720 yesN; two-component system, response regulator YesN
D CLH_0481 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLH_0772 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cbt02024]
D CLH_2583 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLH_1691 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CLH_3206 CpsP K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D CLH_0919 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CLH_0663 CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLH_1246 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CLH_3349 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLH_1468 hypothetical Membrane Spanning Protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLH_1467 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLH_1355 putative lipoprotein K07800 agrD; AgrD protein
D CLH_0707 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLH_1354 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLH_0710 two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLH_2538 tetanolysin O K11031 slo; thiol-activated cytolysin
D CLH_0072 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLH_0071 DNA-binding response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D CLH_2258 oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_2263 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_0401 putative extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_2262 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D CLH_2261 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CLH_2260 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D CLH_2259 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D CLH_1825 heme-binding protein A K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLH_1826 dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLH_1827 glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLH_1828 oligopeptide transport ATP-binding protein AppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLH_1829 oligopeptide transport ATP-binding protein AppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLH_3396 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLH_0962 protein export protein SecD K12257 secDF; SecD/SecF fusion protein
D CLH_0224 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLH_2805 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLH_0257 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLH_0960 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLH_0512 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLH_1194 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLH_1196 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLH_2160 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLH_2007 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLH_2008 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLH_2011 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLH_2010 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLH_2009 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cbt02030]
D CLH_2415 membrane associated methyl-accepting chemotaxis protein with hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0045 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0628 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0697 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2746 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1607 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1655 membrane-associated methyl-accepting chemotaxis protein with hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0953 putative membrane-associated methyl-accepting chemotaxis protein fused to hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1004 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1876 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1795 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1997 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2362 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2898 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2954 membrane assosiated methyl-accepting chemotaxis protein with hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2955 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2971 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_3030 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2786 methyl-accepting chemotaxis sensory protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2919 putative membrane-associated methyl-accepting chemotaxis protein fused to hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2567 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1443 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CLH_2291 D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D CLH_0766 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLH_0762 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLH_0769 chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLH_0768 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLH_0767 cheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D CLH_2697 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D CLH_0764 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLH_1474 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLH_0763 chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CLH_0765 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLH_0808 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLH_0770 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLH_0771 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLH_3304 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLH_0818 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLH_3303 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D CLH_0819 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cbt02040]
D CLH_0806 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CLH_0807 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLH_0808 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLH_0809 flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D CLH_0810 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLH_0811 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CLH_0812 putative flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D CLH_0820 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CLH_0770 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLH_0771 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLH_0821 putative flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D CLH_0822 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLH_0823 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLH_0825 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLH_0824 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLH_0804 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CLH_0805 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CLH_0813 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CLH_0815 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CLH_0816 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CLH_0832 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D CLH_0833 flagellar hook-basal body complex protein FlhP K02392 flgG; flagellar basal-body rod protein FlgG
D CLH_0774 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CLH_0775 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CLH_3179 flagellin K02406 fliC; flagellin
D CLH_0784 flagellin K02406 fliC; flagellin
D CLH_0786 flagellin K02406 fliC; flagellin
D CLH_0803 flagellin K02406 fliC; flagellin
D CLH_0781 flagellar cap protein FliD K02407 fliD; flagellar hook-associated protein 2
D CLH_0780 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CLH_3304 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLH_0818 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLH_3303 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D CLH_0819 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D CLH_0772 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CLH_0881 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CLH_2816 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLH_0829 RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CLH_2806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CLH_2581 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cbt01501]
D CLH_2258 oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_2263 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_0401 putative extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_2262 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D CLH_2261 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CLH_2260 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D CLH_2259 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D CLH_1976 peptidase, M56 family protein K02172 blaR1; bla regulator protein blaR1
D CLH_1977 blaI; penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLH_2558 conserved hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CLH_0936 membrane carboxypeptidase MrcB K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLH_0551 penicillin-binding Protein dimerisation domain family K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLH_2501 metallo-beta-lactamase domain protein K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:cbt01502]
D CLH_2299 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLH_2822 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLH_2823 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLH_1486 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLH_2209 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLH_2208 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLH_0754 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cbt01503]
D CLH_0275 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_2946 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_2947 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_2422 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_0448 trypsin domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D CLH_0648 putative D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D CLH_0649 protein DltB K03739 dltB; membrane protein involved in D-alanine export
D CLH_0650 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D CLH_0646 putative protein dltD K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cbt01000]
C 01001 Protein kinases [BR:cbt01001]
D CLH_1172 serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CLH_3212 tyrosine-protein kinase etk K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLH_1147 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLH_2391 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLH_0918 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CLH_2847 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLH_0072 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLH_2299 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLH_2007 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLH_0710 two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLH_1659 two-component sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLH_0766 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cbt01009]
D CLH_3087 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLH_2739 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CLH_1171 protein phosphatase PrpC K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cbt01002]
D CLH_3299 putative membrane protein K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CLH_3056 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLH_0851 gpr; spore protease K06012 gpr; spore protease [EC:3.4.24.78]
D CLH_1597 hydrogenase maturation protease superfamily K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D CLH_1140 spoIIGA; sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D CLH_1446 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D CLH_0377 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CLH_3123 SagA protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLH_2016 putative surface antigen K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLH_2033 surface protective antigen SpaB K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLH_1040 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLH_0984 gltA; glutamate synthase, NADPH, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CLH_0323 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLH_2310 conserved domain protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLH_1324 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLH_0749 protein ThiJ K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CLH_2377 penicillin acylase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D CLH_0707 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLH_1354 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLH_3143 caax amino protease family protein K07052 K07052; CAAX protease family protein
D CLH_0742 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CLH_1400 colG; collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D CLH_2785 endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CLH_2980 neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CLH_1020 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLH_2030 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CLH_0543 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLH_1288 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CLH_0259 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CLH_0136 metallopeptidase, family M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D CLH_0088 Xaa-Pro aminopeptidase 1 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CLH_1110 botA; bontoxilysin A K06011 boNT; botulinum neurotoxin [EC:3.4.24.69]
D CLH_2398 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CLH_0290 iadA; beta-aspartyl peptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D CLH_3035 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLH_0165 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLH_1274 aminopeptidase, M42 family K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D CLH_0558 sterol-regulatory element binding protein K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D CLH_1217 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CLH_1976 peptidase, M56 family protein K02172 blaR1; bla regulator protein blaR1
D CLH_0448 trypsin domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D CLH_3351 subtilase family protein K17734 aprX; serine protease AprX [EC:3.4.21.-]
D CLH_2096 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLH_2091 putative serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLH_0571 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLH_2618 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLH_1726 peptidase S14, ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLH_2117 peptidase S14, ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLH_2616 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLH_3375 lonC; ATP-dependent protease, Lon family K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLH_1693 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLH_2555 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLH_3037 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLH_3038 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLH_3101 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CLH_0461 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D CLH_0743 rhomboid family protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D CLH_2161 spoIVB; stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D CLH_2240 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLH_2275 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLH_2232 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CLH_1134 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CLH_0440 TldD/PmbA family protein K03592 pmbA; PmbA protein
D CLH_0439 TldD protein K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:cbt01003]
D CLH_0470 putative monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLH_3166 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CLH_0936 membrane carboxypeptidase MrcB K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLH_2227 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CLH_1592 glycosyl transferase, group 36 family protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cbt01005]
D CLH_2223 O-antigen polymerase family K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D CLH_3206 CpsP K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D CLH_2276 bactoprenol glucosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cbt01011]
D CLH_3346 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLH_0493 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLH_3093 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLH_0137 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLH_0181 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLH_2210 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLH_2823 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLH_1486 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLH_0058 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLH_2240 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLH_2275 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLH_2208 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLH_0754 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLH_2348 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLH_3231 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLH_2226 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CLH_0936 membrane carboxypeptidase MrcB K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLH_0551 penicillin-binding Protein dimerisation domain family K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLH_2211 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLH_0579 penicillin-binding protein 3 K21467 pbpC; penicillin-binding protein 3
D CLH_3095 penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D CLH_2096 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLH_2091 putative serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLH_0571 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLH_3123 SagA protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLH_2016 putative surface antigen K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLH_2033 surface protective antigen SpaB K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLH_2395 transglycosylase, SLT family K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLH_0673 putative exported protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLH_1132 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CLH_0494 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CLH_0275 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_2946 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_2947 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_2422 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cbt01004]
D CLH_1083 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLH_0634 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLH_1080 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLH_1085 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLH_1021 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLH_1084 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLH_1093 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLH_1087 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLH_1082 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CLH_0443 putative esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CLH_1050 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D CLH_1189 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CLH_2825 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLH_3257 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cbt01006]
D CLH_2167 putative geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLH_1213 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLH_2653 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLH_1690 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:cbt01007]
D CLH_2322 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CLH_2913 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLH_1895 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLH_2918 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLH_0216 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLH_2328 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLH_0096 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLH_0078 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLH_2274 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLH_2897 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLH_0171 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLH_0970 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLH_0134 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLH_0969 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLH_0180 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLH_0018 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLH_0215 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLH_0333 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLH_1565 threonyl-tRNA synthetase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLH_1125 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLH_1843 dhha1 domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLH_2242 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLH_2241 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLH_0758 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLH_3045 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLH_2728 aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D CLH_2264 aminotransferase, classes I and II K10907 K10907; aminotransferase [EC:2.6.1.-]
D CLH_2629 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLH_2870 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CLH_2646 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CLH_1022 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLH_0760 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLH_1450 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cbt00194]
D CLH_0491 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLH_0490 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLH_0489 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLH_0488 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CLH_0487 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLH_0486 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CLH_0485 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLH_0484 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cbt03000]
D CLH_2487 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLH_1585 LysR-family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CLH_0701 deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D CLH_2046 fructose repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CLH_0496 spoIIID; stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CLH_1250 DNA-binding protein IolR K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor
D CLH_0876 CBS domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D CLH_0079 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLH_0117 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLH_1444 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLH_2727 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLH_0912 HTH-type transcriptional regulator MalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLH_1547 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLH_3236 sucrose repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D CLH_1688 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D CLH_0679 GntR-family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CLH_2880 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CLH_3253 transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CLH_3252 transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CLH_0346 transcriptional regulator, FadR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CLH_1524 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
D CLH_0033 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D CLH_2442 transcriptional regulatory protein NfxB K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D CLH_2317 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CLH_2973 transcriptional regulator, LuxR family protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D CLH_3316 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CLH_3321 MarR family regulatory protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CLH_1072 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CLH_1813 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CLH_1129 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLH_0737 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLH_2610 transcriptional regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CLH_0663 CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLH_1808 cyclic nucleotide-binding domain protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CLH_0700 camp-binding domain protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D CLH_1470 cyclic nucleotide-binding domain protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D CLH_1119 Rrf2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D CLH_2041 putative arsenical resistance operon repressor ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CLH_0358 cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CLH_1991 transcriptional regulator ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D CLH_2494 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CLH_1792 putative iron-dependent repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D CLH_1958 transcriptional regulator, RpiR family K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D CLH_1977 blaI; penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLH_2333 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CLH_0138 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D CLH_1778 signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLH_0624 signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLH_2959 signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLH_0582 hypothetical sigma-54-dependent transcriptional regulator YgeV K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLH_2081 sugar diacid utilization regulator K02647 cdaR; carbohydrate diacid regulator
D CLH_0360 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D CLH_1208 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D CLH_3077 transcription regulator, Cro/CI family -related protein K07727 K07727; putative transcriptional regulator
D CLH_1980 conserved domain protein K07729 K07729; putative transcriptional regulator
D CLH_2140 conserved domain protein K07729 K07729; putative transcriptional regulator
D CLH_1700 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D CLH_1431 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator
D CLH_3175 transcriptional antiterminator, BglG family K03480 glcT; transcriptional antiterminator
D CLH_3328 putative phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K03483 mtlR; mannitol operon transcriptional activator
D CLH_0381 putative transcription antiterminator K03491 licR; probable licABCH operon transcriptional regulator
D CLH_3062 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLH_1839 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLH_3120 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CLH_0146 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D CLH_1753 ParB protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLH_3389 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLH_3391 protein YyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLH_2134 ParB protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLH_0989 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CLH_0693 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CLH_0976 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D CLH_0335 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D CLH_2163 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CLH_0856 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CLH_1337 tena/thi-4 family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CLH_0202 transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D CLH_2815 transcriptional regulator, SorC family K05311 cggR; central glycolytic genes regulator
D CLH_2196 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLH_1144 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D CLH_2214 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cbt03021]
D CLH_0266 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLH_0230 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLH_0231 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLH_1163 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLH_0881 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CLH_2465 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLH_1073 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLH_2756 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLH_2440 specialized sigma subunit of RNA polymerase K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLH_2022 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLH_0843 sigF; RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLH_1136 sigK; RNA polymerase sigma-K factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLH_1141 sigE; RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLH_1142 sigG; RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLH_0220 sigH; RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor
D CLH_2063 sigma factor SgiI K03093 sigI; RNA polymerase sigma-I factor
D CLH_2816 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLH_0829 RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA
D CLH_1221 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CLH_2171 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CLH_0225 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CLH_0170 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CLH_1580 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CLH_0469 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cbt03019]
D CLH_0561 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D CLH_1191 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLH_1130 RNA-metabolising metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLH_1503 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLH_1239 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CLH_2803 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLH_0674 HD hydrolase superfamily protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D CLH_3339 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CLH_3258 ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_1287 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_1286 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_1397 cold-shock deAd box protein a K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_2071 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLH_2841 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLH_2806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLH_1230 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLH_0469 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CLH_3087 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLH_0858 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLH_0374 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLH_1691 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CLH_0777 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CLH_3180 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CLH_3092 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:cbt03011]
D CLH_0541 putative 30S ribosomal protein S1 homolog K02945 RP-S1; small subunit ribosomal protein S1
D CLH_1767 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D CLH_1209 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CLH_0243 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CLH_0265 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLH_0254 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CLH_3381 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CLH_0233 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CLH_0251 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLH_0273 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CLH_0236 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CLH_0264 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLH_0232 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CLH_0263 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLH_0250 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CLH_1229 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CLH_1197 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CLH_0246 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CLH_3379 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CLH_0241 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CLH_0850 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CLH_0866 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CLH_0227 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CLH_0240 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CLH_0237 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CLH_0238 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CLH_0249 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CLH_0252 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CLH_3376 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CLH_0228 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CLH_0226 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CLH_0229 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLH_0272 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CLH_0247 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CLH_0256 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CLH_0244 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CLH_0267 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CLH_0253 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CLH_1201 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CLH_2247 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CLH_0562 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CLH_0242 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CLH_0239 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLH_0248 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CLH_0564 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CLH_1176 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CLH_0245 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CLH_0255 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CLH_0471 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CLH_1188 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLH_0223 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CLH_3398 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CLH_2248 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CLH_0262 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CLH_2024 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLH_2025 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLH_3158 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3169 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3307 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_0011 rrfI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3130 rrfM; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_0188 rrfJ; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3285 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3293 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3289 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3302 rrfN; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3275 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3279 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_0008 rrsI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3282 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3292 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3288 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3310 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3296 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3172 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_0183 rrsJ; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3278 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_0430 rrsK; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3161 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3170 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3290 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3286 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3308 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3280 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3276 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_0010 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3294 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3159 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_0187 rrlJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_0433 rrlK; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cbt03009]
D CLH_1191 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLH_0873 era; GTP-binding protein Era K03595 era; GTPase
D CLH_0565 GTPase, Obg family K03979 obgE; GTPase [EC:3.6.5.-]
D CLH_1221 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CLH_2171 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CLH_0225 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CLH_0393 RNA pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CLH_3076 RNA pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CLH_0100 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CLH_1169 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CLH_1180 rsmD; RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CLH_0863 conserved surface protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CLH_3392 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLH_2213 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CLH_3121 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CLH_1326 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D CLH_2165 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CLH_0218 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CLH_3342 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CLH_1403 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CLH_0069 PUA domain containing protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CLH_1170 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CLH_3084 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CLH_1529 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CLH_2601 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CLH_2197 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLH_0570 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLH_2279 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D CLH_0523 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CLH_2406 acetyltransferase, GNAT family K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CLH_3176 acetyltransferase, gnat family K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D CLH_1199 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CLH_1236 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CLH_0920 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CLH_0862 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CLH_0561 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D CLH_1127 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CLH_0217 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D CLH_3258 ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_1287 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_1286 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_1397 cold-shock deAd box protein a K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLH_1173 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLH_1154 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D CLH_1202 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
D CLH_0939 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D CLH_0477 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLH_0965 putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLH_1225 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CLH_1220 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CLH_0003 yaaA; S4 domain protein YaaA K14761 rlbA; ribosome-associated protein
D CLH_0871 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D CLH_0566 CRS1/YhbY domain protein K07574 yhbY; RNA-binding protein
D CLH_0511 ribosomal protein S30AE family K05808 hpf; ribosome hibernation promoting factor
D CLH_2220 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D CLH_1187 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cbt03016]
D CLH_0996 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CLH_3272 conserved hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CLH_1531 tRNA nucleotidyltransferase/poly(A) polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CLH_0215 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLH_0078 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLH_2897 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLH_0096 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLH_2328 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLH_0171 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLH_0970 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLH_1125 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLH_1843 dhha1 domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLH_0134 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLH_0180 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLH_0333 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLH_1565 threonyl-tRNA synthetase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLH_0018 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLH_0216 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLH_2274 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLH_0969 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLH_2242 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLH_2241 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLH_2913 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLH_1895 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLH_2918 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLH_0966 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CLH_0865 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLH_0861 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CLH_0271 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CLH_1227 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CLH_1120 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_2635 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_1927 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_0477 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLH_1690 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CLH_3394 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CLH_3393 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLH_0607 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLH_3397 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CLH_3420 Bacterial RNase P class A K01978 rnpB; M1 RNA
D CLH_0403 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CLH_2322 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CLH_1698 ybaK; YbaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CLH_3232 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CLH_0168 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CLH_1699 miaB; tRNA-I(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CLH_0864 conserved hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CLH_1200 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CLH_0882 Bcl-2 family protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D CLH_2818 hypothetical tRNA/rRNA methyltransferase Slr0992 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CLH_3122 SAM-dependent methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CLH_2244 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D CLH_1122 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLH_2036 ExsB family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CLH_0958 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CLH_2826 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLH_0959 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CLH_2634 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CLH_0163 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CLH_0524 glycoprotease family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CLH_0446 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CLH_0525 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CLH_3182 thiF domain protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CLH_1184 protein YlbM K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D CLH_2803 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLH_1230 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cbt03012]
D CLH_1224 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CLH_2249 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLH_0730 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CLH_1312 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CLH_1210 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CLH_0222 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLH_0235 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLH_3148 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CLH_0234 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CLH_0475 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CLH_1212 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CLH_0474 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CLH_0143 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CLH_0261 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CLH_2182 efp; translation elongation factor P K02356 efp; elongation factor P
D CLH_0514 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CLH_2962 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cbt03110]
D CLH_0718 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CLH_0205 putative negative regulator of genetic competence MecB/ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CLH_2617 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CLH_2739 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CLH_0858 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLH_0374 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLH_0859 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CLH_2252 hslO; chaperonin HslO K04083 hslO; molecular chaperone Hsp33
D CLH_0857 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CLH_3259 hypothetical protein K13993 HSP20; HSP20 family protein
D CLH_0373 groS; chaperonin GroS K04078 groES; chaperonin GroES
D CLH_0448 trypsin domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D CLH_3035 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLH_0165 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLH_0484 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLH_1598 putative hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CLH_1575 hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CLH_1573 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CLH_1368 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D CLH_0059 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CLH_0629 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CLH_0145 putative peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D CLH_3125 foldase protein PrsA K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CLH_2302 trx; thioredoxin K03671 TXN; thioredoxin
D CLH_2537 trx; thioredoxin K03671 TXN; thioredoxin
D CLH_2951 trx; thioredoxin K03671 TXN; thioredoxin
D CLH_3317 thioredoxin K03671 TXN; thioredoxin
D CLH_0208 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:cbt04131]
D CLH_0927 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CLH_2411 putative arsenite-transporting ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CLH_2814 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLH_2569 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_3086 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_0542 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_2739 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:cbt04121]
C 03051 Proteasome [BR:cbt03051]
D CLH_2739 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cbt03032]
D CLH_2487 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLH_0149 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLH_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLH_3374 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLH_3354 dnaC family protein K02315 dnaC; DNA replication protein DnaC
D CLH_0880 putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLH_3380 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLH_3114 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CLH_3088 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLH_1219 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLH_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLH_0849 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLH_0198 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLH_1583 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLH_2336 exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLH_3226 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLH_1203 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLH_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLH_0395 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLH_2099 DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CLH_0007 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLH_0006 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLH_0748 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLH_0747 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLH_1207 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLH_2387 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CLH_1538 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cbt03036]
D CLH_2487 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLH_1191 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLH_0149 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLH_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLH_1691 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CLH_1193 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D CLH_2095 ScpA/B protein K05896 scpA; segregation and condensation protein A
D CLH_2094 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CLH_1138 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CLH_3103 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLH_1235 putative stage III sporulation protein E K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CLH_2212 cell division protein FtsL homolog K03586 ftsL; cell division protein FtsL
D CLH_2206 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CLH_2207 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CLH_3102 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein
D CLH_1139 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLH_0275 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_2946 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_2947 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_2422 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_0552 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLH_0553 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLH_0554 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CLH_2198 putative septum site-determining protein divIVA K04074 divIVA; cell division initiation protein
D CLH_2201 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D CLH_0497 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLH_0548 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLH_0549 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CLH_0550 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CLH_0555 stage V sporulation protein E K05837 rodA; rod shape determining protein RodA
D CLH_2404 stage V sporulation protein E K05837 rodA; rod shape determining protein RodA
D CLH_2135 soj; SpoOJ regulator protein K03496 parA; chromosome partitioning protein
D CLH_3390 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CLH_1754 sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D CLH_1753 ParB protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLH_3389 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLH_3391 protein YyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLH_2134 ParB protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLH_0748 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLH_0747 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLH_3393 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLH_3392 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLH_2150 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CLH_1697 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D CLH_0148 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D CLH_2615 GTP-binding protein K03978 engB; GTP-binding protein
D CLH_3090 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cbt03400]
D CLH_1893 methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CLH_3126 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CLH_0116 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CLH_0367 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLH_2824 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLH_1542 mutT; MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CLH_1667 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CLH_0729 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CLH_1864 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CLH_0676 AP endonuclease, family 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLH_0750 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLH_0395 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLH_2397 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLH_3098 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLH_3099 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CLH_3094 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CLH_0394 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_3034 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_2605 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_2579 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLH_0230 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLH_0231 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLH_0266 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLH_1163 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLH_0144 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLH_1684 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CLH_2231 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLH_1633 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLH_1689 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CLH_2169 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CLH_2168 conserved domain protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLH_3088 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLH_1219 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLH_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLH_0849 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLH_0198 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLH_1583 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLH_2336 exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLH_3226 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLH_3380 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLH_3114 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CLH_2099 DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CLH_0508 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLH_1238 recA; protein RecA K03553 recA; recombination protein RecA
D CLH_0956 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CLH_0957 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLH_1165 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CLH_2740 sbcC; exonuclease SbcCD, C subunit K03546 sbcC; DNA repair protein SbcC/Rad50
D CLH_1292 RecF/RecN/SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D CLH_2741 sbcD; exonuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D CLH_0532 Ser/Thr protein phosphatase family protein K03547 sbcD; DNA repair protein SbcD/Mre11
D CLH_0210 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CLH_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLH_1179 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLH_0874 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CLH_3224 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CLH_2162 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CLH_0025 addA; ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CLH_0024 addB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CLH_0007 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLH_0006 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLH_1207 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLH_0149 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLH_2071 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLH_2841 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLH_1693 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLH_2296 regulatory protein RecX K03565 recX; regulatory protein
D CLH_1903 putative exonuclease K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CLH_0284 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLH_0285 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CLH_1226 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cbt03029]
D CLH_1224 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CLH_2249 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLH_1210 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CLH_0222 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLH_0235 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLH_3148 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CLH_0234 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CLH_2026 ATP-dependent RNA helicase, superfamily II K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D CLH_0873 era; GTP-binding protein Era K03595 era; GTPase
D CLH_2913 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLH_1895 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLH_2897 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLH_0970 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLH_0180 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLH_2328 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLH_0398 glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLH_0399 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLH_0397 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLH_3380 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLH_3114 single-strand binding protein family K03111 ssb; single-strand DNA-binding protein
D CLH_0858 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLH_0857 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CLH_0374 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLH_0373 groS; chaperonin GroS K04078 groES; chaperonin GroES
D CLH_0859 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CLH_1120 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_2635 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_1927 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_3396 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLH_1506 conserved hypothetical protein K21356 MFN1; mitofusin 1 [EC:3.6.5.-]
D CLH_2739 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cbt02000]
D CLH_0688 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_0311 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_2705 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_0310 ABC-type multidrug/protein/lipid transport system, ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_0689 lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_2704 lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLH_2304 lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CLH_3070 ABC transporter, ATP-binding/permease protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D CLH_3071 multidrug resistance protein 1 K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D CLH_1590 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D CLH_1673 ABC transporter ATP-binding protein uup K15738 uup; ABC transport system ATP-binding/permease protein
D CLH_2797 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLH_1318 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLH_2798 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CLH_1319 putative membrane protein K02018 modB; molybdate transport system permease protein
D CLH_1320 spermidine/putrescine import ATP-binding protein PotA K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLH_2799 putrescine transport ATP-binding protein PotG K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLH_1877 periplasmic-iron-binding protein BitA K02012 afuA; iron(III) transport system substrate-binding protein
D CLH_1067 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CLH_0372 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CLH_0928 potD; spermidine/putrescine-binding periplasmic protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLH_0929 spermidine/putrescine transport system permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D CLH_0930 potB; spermidine/putrescine ABC transporter, permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D CLH_0931 spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLH_2668 glycine betaine/carnitine/choline transport system permease protein opucb K05845 opuC; osmoprotectant transport system substrate-binding protein
D CLH_2669 glycine betaine/L-proline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLH_1344 glycine betaine/carnitine/choline transport ATP-binding protein opuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLH_2382 periplasmic binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLH_2307 ABC transporter, substrate-binding lipoprotein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLH_2384 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLH_2306 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLH_2383 aliphatic sulfonates import ATP-binding protein SsuB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLH_2305 aliphatic sulfonates import ATP-binding protein SsuB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLH_0910 multiple sugar-binding transport ATP-binding protein MsmK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLH_2416 maltose-binding protein K25086 musE; maltose transport system substrate-binding protein
D CLH_2417 ABC transporter, permease protein K25087 musF; maltose transport system permease protein
D CLH_2418 sugar ABC transporter, permease protein K25088 musG; maltose transport system permease protein
D CLH_0119 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CLH_0120 ABC-type sugar transport system, permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D CLH_0121 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D CLH_2291 D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D CLH_1443 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CLH_1442 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D CLH_1441 ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLH_2726 lipoprotein, bmp family K07335 bmpA; basic membrane protein A and related proteins
D CLH_3251 putative membrane protein K07335 bmpA; basic membrane protein A and related proteins
D CLH_2724 sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D CLH_3249 sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D CLH_3248 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D CLH_2723 sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D CLH_3250 ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D CLH_2725 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CLH_1543 sugar ABC transporter K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLH_2935 putative glycerol-3-phosphate ABC transporter K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLH_0451 putative arabinose-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLH_2934 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D CLH_1544 sugar ABC transporter permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D CLH_1545 sugar ABC transporter K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CLH_2933 sugar ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CLH_1148 periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLH_1149 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CLH_1150 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CLH_1151 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLH_3033 amino acid ABC transporter K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CLH_3032 amino acid ABC transporter, amino acid-binding/permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D CLH_3031 glutamine transport ATP-binding protein GlnQ K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CLH_1094 ABC transporter, substrate-binding lipoprotein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CLH_1095 ABC transporter integral membrane protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CLH_1096 phosphonates import ATP-binding protein PhnC 2 K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CLH_1031 amino acid ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CLH_1032 L-cystine transport system permease protein TcyB K02029 ABC.PA.P; polar amino acid transport system permease protein
D CLH_1033 ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CLH_2258 oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_2263 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_0401 putative extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLH_2262 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D CLH_2261 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CLH_2260 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D CLH_2259 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D CLH_1825 heme-binding protein A K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLH_1826 dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLH_1827 glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLH_1828 oligopeptide transport ATP-binding protein AppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLH_1829 oligopeptide transport ATP-binding protein AppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLH_1953 iron compound ABC transporter, iron compound-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D CLH_1952 fhuB; ferrichrome transport system permease protein FhuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D CLH_1951 fhuG; ferrichrome transport system permease protein FhuG K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D CLH_1950 ferric enterobactin transport ATP-binding protein FepC K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D CLH_3264 ferric siderophore ABC transporter,substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D CLH_3266 ABC transporter, iron chelate uptake transporter (FeCT) family, permease protein K25283 yclO; iron-siderophore transport system permease protein
D CLH_3267 iron chelate uptake ABC transporter, FeCT family, permease protein K25284 yclN; iron-siderophore transport system permease protein
D CLH_3265 ferrichrome transport ATP-binding protein FhuC K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CLH_0601 putative iron chelate uptake ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLH_1393 putative iron chelate uptake ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLH_0576 putative iron compound ABC transporter, periplasmic iron compound-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLH_0602 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CLH_1394 Fe uptake system integral membrane protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CLH_0577 HmuU protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CLH_0603 putative iron ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLH_1395 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLH_0578 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLH_0534 periplasmic solute binding protein family K09815 znuA; zinc transport system substrate-binding protein
D CLH_0738 putative metal ion ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CLH_0739 putative metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLH_0615 cobalt/cobalamin transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D CLH_0612 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLH_1577 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLH_0614 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLH_1576 cobalamin K02007 cbiM; cobalt/nickel transport system permease protein
D CLH_0613 cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLH_1578 cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLH_2563 BioY protein K03523 bioY; biotin transport system substrate-specific component
D CLH_0684 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CLH_2768 integral membrane protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D CLH_2842 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D CLH_0270 cobalt transport permease, CbiQ family K16785 ecfT; energy-coupling factor transport system permease protein
D CLH_0268 cobalt import ATP-binding protein CbiO 3 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLH_0269 cobalt import ATP-binding protein CbiO 2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLH_0526 putative ABC transporter substrate-binding lipoprotein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D CLH_2999 O-antigen export system ATP-binding protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D CLH_2998 O-antigen export system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CLH_2010 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLH_2009 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
D CLH_2011 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLH_1055 ABC transporter, permease component K11632 bceB; bacitracin transport system permease protein
D CLH_1056 bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein
D CLH_2845 ABC-type antimicrobial peptide transport system, permease component K19084 braE; bacitracin transport system permease protein
D CLH_2846 bacitracin export ATP-binding protein BceA K19083 braD; bacitracin transport system ATP-binding protein
D CLH_1526 putative membrane protein K16919 ytrC_D; acetoin utilization transport system permease protein
D CLH_1525 ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D CLH_3102 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein
D CLH_3103 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLH_1614 putative permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLH_2084 putative ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLH_2085 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLH_3220 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLH_1788 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLH_1328 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLH_0643 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLH_1789 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLH_1613 bacitracin transport ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLH_3221 putative bacitracin transport ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLH_1800 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLH_1616 putative ABC transporter-associated permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CLH_2559 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLH_3314 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLH_1057 putative ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLH_2560 macrolide export ATP-binding/permease protein MacB 2 K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLH_3315 bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLH_1615 lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLH_1058 bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLH_1277 mate efflux family protein K26939 norM; MATE family, multidrug efflux pump
D CLH_2287 mate efflux family protein K26939 norM; MATE family, multidrug efflux pump
D CLH_1517 mate efflux family protein K26939 norM; MATE family, multidrug efflux pump
D CLH_1902 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLH_1520 putative integral membrane protein K26937 dinF; MATE family, multidrug efflux pump
D CLH_2048 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLH_2359 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLH_1898 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLH_1502 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CLH_1028 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CLH_1404 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLH_0081 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLH_0325 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLH_1427 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLH_1870 transporter, major facilitator family K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D CLH_0669 inner membrane transport protein YdiN K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D CLH_1552 transporter, major facilitator family K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D CLH_1068 hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D CLH_0336 glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D CLH_1340 transporter, major facilitator family K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D CLH_1341 transporter, major facilitator family K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D CLH_1624 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D CLH_0286 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLH_1241 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D CLH_3173 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLH_3174 PTS system, glucose-like IIB component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLH_0682 nagE; pts system, N-acetylglucosamine-specific iibc component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLH_0316 pts system, iibc component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLH_1955 PTS system, glucose-like IIB component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLH_3237 pts system, sucrose-specific iibc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLH_2694 phosphotransferase system, EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLH_1429 PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLH_1686 treP; pts system, trehalose-specific iibc component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLH_2044 heat-responsive suppressor HrsA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CLH_1417 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLH_1416 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLH_1420 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
D CLH_0386 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLH_0384 glucitol/sorbitol-specific phosphotransferase enzyme iib component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLH_0385 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLH_0383 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CLH_1314 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CLH_1315 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D CLH_1316 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D CLH_2878 PTS system fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D CLH_2883 PTS system, mannose/fructose/sorbose family, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D CLH_2882 PTS system sorbose-specific iic component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D CLH_2881 PTS system mannose/fructose/sorbose family IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D CLH_3327 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLH_3019 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLH_3326 PTS sysytem, mannitol-specific enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLH_3017 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLH_3325 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D CLH_3018 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D CLH_0095 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D CLH_1934 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D CLH_0092 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D CLH_2419 Ion channel family K10716 kch; voltage-gated potassium channel
D CLH_2793 formate/nitrite family of transporter K02598 nirC; nitrite transporter
D CLH_0328 formate/nitrite transporter family protein K02598 nirC; nitrite transporter
D CLH_1572 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D CLH_2239 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D CLH_3383 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D CLH_3304 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLH_0818 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLH_3303 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D CLH_0819 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D CLH_0191 magnesium and cobalt transporter K03284 corA; magnesium transporter
D CLH_3215 CBS/transporter domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLH_3233 putative membrane CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLH_1048 conserved hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CLH_2066 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CLH_2385 LrgA family protein K06518 cidA; holin-like protein
D CLH_1851 propanediol utilization protein PduA K27260 pduA; bacterial microcompartment shell protein
D CLH_2916 spore germination protein K06296 gerKB; spore germination protein KB
D CLH_2711 zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D CLH_3349 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLH_1468 hypothetical Membrane Spanning Protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLH_1467 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLH_2080 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CLH_1309 lctP; L-lactate permease K03303 lutP; lactate permease
D CLH_1011 K+-dependent Na+/Ca+ exchanger protein K07301 yrbG; cation:H+ antiporter
D CLH_1471 sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter
D CLH_2896 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D CLH_0327 cell volume regulation protein A K11105 cvrA; potassium/hydrogen antiporter
D CLH_1993 transporter, monovalent cation:proton antiporter-2 (CPA2) family K26730 napA; Na+:H+ antiporter
D CLH_2246 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D CLH_1657 V-type sodium ATP synthase subunit J K03498 trkH; trk/ktr system potassium uptake protein
D CLH_2245 potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D CLH_2700 pyrP; uracil permease K02824 uraA; uracil permease
D CLH_0600 xanthine permease K16169 pbuX; xanthine permease
D CLH_0594 xanthine permease K24206 uacT; uric acid transporter
D CLH_2378 inner membrane protein YicO K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLH_1637 putative xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLH_1641 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLH_1609 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLH_1263 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLH_1392 inner membrane protein YicO K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLH_1159 inner membrane protein YicO K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLH_1035 voltage gated chloride channel family K03281 clcA; chloride channel protein, CIC family
D CLH_1266 voltage-gated chloride channel K03281 clcA; chloride channel protein, CIC family
D CLH_0287 chrA; chromate transport protein K07240 chrA; chromate transporter
D CLH_0288 putative chromate transport protein K07240 chrA; chromate transporter
D CLH_3269 sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D CLH_0274 Na/Pi-cotransporter family protein/PhoU family protein K03324 yjbB; phosphate:Na+ symporter
D CLH_0995 Na/Pi-cotransporter family protein/PhoU family protein K03324 yjbB; phosphate:Na+ symporter
D CLH_2411 putative arsenite-transporting ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CLH_2599 spoVB; stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CLH_2600 polysaccharide biosynthesis family protein K06409 spoVB; stage V sporulation protein B
D CLH_0147 putative stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CLH_2226 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CLH_2216 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D CLH_2217 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D CLH_0522 riboflavin transporter K23675 fmnP; riboflavin transporter
D CLH_2717 conserved hypothetical protein K23675 fmnP; riboflavin transporter
D CLH_1336 thiamine transporter protein K16789 thiT; thiamine transporter
D CLH_0107 probable proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D CLH_2580 putative membrane protein K16788 niaX; niacin transporter
D CLH_2207 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CLH_2243 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D CLH_2804 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D CLH_2536 cytochrome C biogenesis protein transmembrane region family K06196 ccdA; cytochrome c-type biogenesis protein
D CLH_3212 tyrosine-protein kinase etk K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLH_3213 capsular polysaccharide biosynthsis protein K19420 epsA; protein tyrosine kinase modulator
D CLH_2325 feoA; ferrous ion transport protein A K04758 feoA; ferrous iron transport protein A
D CLH_2779 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CLH_2780 conserved domain protein K04758 feoA; ferrous iron transport protein A
D CLH_1793 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CLH_2326 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLH_2778 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLH_1794 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLH_2388 TspO/MBR family protein K05770 TSPO; translocator protein
D CLH_1676 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CLH_1678 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:cbt02044]
D CLH_3056 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLH_3053 prepilin peptidase-dependent K02650 pilA; type IV pilus assembly protein PilA
D CLH_3055 type IV pilus assembly protein TapB K02652 pilB; type IV pilus assembly protein PilB
D CLH_3054 bacterial type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D CLH_3052 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D CLH_3051 fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D CLH_3050 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D CLH_1137 twitching mobility protein K02669 pilT; twitching motility protein PilT
D CLH_2200 yggt family protein K02221 yggT; YggT family protein
D CLH_0572 ComE operon protein 1 K02237 comEA; competence protein ComEA
D CLH_0480 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLH_2097 metallo beta-lactamase family protein K02238 comEC; competence protein ComEC
D CLH_0848 putative competence protein K02238 comEC; competence protein ComEC
D CLH_2321 metallo-beta-lactamase family protein K02238 comEC; competence protein ComEC
D CLH_2238 metallo-beta-lactamase family protein K02238 comEC; competence protein ComEC
D CLH_3013 putative surface protein C K02238 comEC; competence protein ComEC
D CLH_2142 metallo beta-lactamase family protein K02238 comEC; competence protein ComEC
D CLH_1532 conserved hypothetical protein K02241 comFB; competence protein ComFB
D CLH_0510 competence protein F K02242 comFC; competence protein ComFC
D CLH_0825 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLH_2911 flagella-associated protein K04061 flhB2; flagellar biosynthesis protein
D CLH_0807 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLH_0809 flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D CLH_0810 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLH_0771 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLH_0821 putative flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D CLH_0822 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLH_0823 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLH_0824 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLH_0512 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLH_0962 protein export protein SecD K12257 secDF; SecD/SecF fusion protein
D CLH_0224 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLH_2805 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLH_0257 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLH_1196 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLH_1194 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLH_0960 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLH_3396 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:cbt02042]
D CLH_1110 botA; bontoxilysin A K06011 boNT; botulinum neurotoxin [EC:3.4.24.69]
D CLH_1111 ntnH; botulinum neurotoxin type E, nontoxic-nonhemagglutinin component, NTNH K16623 ntnH; botulinum neurotoxin type non-toxic component
D CLH_2538 tetanolysin O K11031 slo; thiol-activated cytolysin
D CLH_3215 CBS/transporter domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLH_3233 putative membrane CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLH_0040 hemolysin-3 K11068 hlyIII; hemolysin III
D CLH_1400 colG; collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
C 02022 Two-component system [BR:cbt02022]
D CLH_1147 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLH_2391 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLH_1146 alkaline phosphatase synthesis transcriptional regulatory proteinphoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLH_1064 phoP; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLH_2761 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLH_1422 two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLH_0369 alkaline phosphatase synthesis transcriptional regulatory proteinphoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLH_0918 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CLH_0919 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CLH_2298 transcriptional regulatory protein ResD K07775 resD; two-component system, OmpR family, response regulator ResD
D CLH_2847 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLH_2848 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CLH_0072 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLH_0071 DNA-binding response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D CLH_2299 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLH_2822 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLH_2007 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLH_2008 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLH_0142 two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CLH_2160 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLH_0710 two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLH_1659 two-component sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLH_0090 sigma54 dependent transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D CLH_0766 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLH_0768 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLH_0764 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLH_1474 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLH_1943 DNA-bindng response regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D CLH_1660 transcriptional regulatory protein K07720 yesN; two-component system, response regulator YesN
D CLH_0983 ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:cbt02035]
D CLH_0766 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLH_0762 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLH_0769 chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLH_2697 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D CLH_0767 cheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D CLH_0763 chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CLH_0765 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLH_0764 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLH_0768 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLH_1474 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLH_2415 membrane associated methyl-accepting chemotaxis protein with hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0045 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0628 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0697 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2746 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1607 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1655 membrane-associated methyl-accepting chemotaxis protein with hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0953 putative membrane-associated methyl-accepting chemotaxis protein fused to hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1004 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1876 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1795 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_1997 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2362 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2898 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2954 membrane assosiated methyl-accepting chemotaxis protein with hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2955 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2971 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_3030 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2786 methyl-accepting chemotaxis sensory protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2919 putative membrane-associated methyl-accepting chemotaxis protein fused to hamp domain K03406 mcp; methyl-accepting chemotaxis protein
D CLH_2567 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLH_0809 flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D CLH_0810 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLH_0811 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CLH_0821 putative flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D CLH_0822 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLH_0823 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLH_0824 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLH_0825 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLH_0808 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLH_0770 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLH_0771 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLH_0807 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLH_0820 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CLH_0806 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CLH_0812 putative flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D CLH_0804 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CLH_0805 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CLH_0813 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CLH_0832 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D CLH_0833 flagellar hook-basal body complex protein FlhP K02392 flgG; flagellar basal-body rod protein FlgG
D CLH_0815 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CLH_0816 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CLH_0774 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CLH_0775 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CLH_0657 FliB family protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D CLH_0378 FliB domain protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D CLH_1963 FliB family protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D CLH_0800 conserved hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D CLH_1786 FliB family protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D CLH_3179 flagellin K02406 fliC; flagellin
D CLH_0784 flagellin K02406 fliC; flagellin
D CLH_0786 flagellin K02406 fliC; flagellin
D CLH_0803 flagellin K02406 fliC; flagellin
D CLH_0781 flagellar cap protein FliD K02407 fliD; flagellar hook-associated protein 2
D CLH_0780 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CLH_0829 RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA
D CLH_3304 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLH_0818 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLH_3303 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D CLH_0819 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D CLH_0776 fliW; flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D CLH_0772 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CLH_0778 flaG family protein K06603 flaG; flagellar protein FlaG
D CLH_0817 conserved domain protein K02385 flbD; flagellar protein FlbD
D CLH_0826 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D CLH_0827 flhG; flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D CLH_1137 twitching mobility protein K02669 pilT; twitching motility protein PilT
D CLH_3053 prepilin peptidase-dependent K02650 pilA; type IV pilus assembly protein PilA
D CLH_3055 type IV pilus assembly protein TapB K02652 pilB; type IV pilus assembly protein PilB
D CLH_3054 bacterial type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D CLH_3056 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLH_3050 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D CLH_3051 fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D CLH_3052 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cbt04812]
D CLH_0497 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLH_0548 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLH_1139 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLH_1138 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CLH_0552 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLH_0553 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLH_0554 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CLH_2135 soj; SpoOJ regulator protein K03496 parA; chromosome partitioning protein
D CLH_3390 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CLH_1754 sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D CLH_1753 ParB protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLH_3389 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLH_3391 protein YyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLH_2134 ParB protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cbt04147]
D CLH_2739 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CLH_2806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLH_2814 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLH_2813 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLH_2569 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_3086 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_0542 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLH_1020 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLH_0374 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLH_0858 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLH_0389 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLH_0376 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLH_0222 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLH_0235 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLH_0865 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLH_2335 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLH_3305 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLH_0482 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLH_0258 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLH_0964 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLH_2866 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLH_2865 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLH_0593 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLH_3167 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CLH_0977 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CLH_0057 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_0982 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLH_2647 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CLH_3217 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLH_1043 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLH_3138 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLH_0364 etfA; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CLH_1308 electron transfer flavoprotein alpha-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CLH_2812 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cbt02048]
D CLH_2099 DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CLH_2487 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLH_2121 Gp54 protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D CLH_2517 putative restriction endonuclase K07448 mrr; restriction system protein
D CLH_3108 endoribonuclease EndoA K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CLH_1139 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLH_0497 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLH_0548 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLH_0748 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLH_0747 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLH_1120 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_2635 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_1927 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLH_1923 dndB; DNA sulfur modification protein DndB K19169 dndB; DNA sulfur modification protein DndB
D CLH_1924 dndC; putative sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC
D CLH_1925 dndD; DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD
D CLH_1926 conserved hypothetical protein K19172 dndE; DNA sulfur modification protein DndE
D CLH_1932 conserved hypothetical protein K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF
D CLH_1931 conserved hypothetical protein K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG
D CLH_1930 conserved hypothetical protein K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:cbt04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cbt01504]
D CLH_0924 spermine/spermidine acetyltransferase K18815 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D CLH_1861 GTP-binding elongation factor, TetM/TetO family K18220 tetM; ribosomal protection tetracycline resistance protein
D CLH_1590 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D CLH_2469 chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CLH_1976 peptidase, M56 family protein K02172 blaR1; bla regulator protein blaR1
D CLH_1977 blaI; penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLH_2558 conserved hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CLH_2299 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLH_2822 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLH_0648 putative D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D CLH_0649 protein DltB K03739 dltB; membrane protein involved in D-alanine export
D CLH_0650 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D CLH_0646 putative protein dltD K03740 dltD; D-alanine transfer protein
D CLH_2442 transcriptional regulatory protein NfxB K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cbt00537]
D CLH_1020 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cbt03100]
D CLH_0013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLH_0184 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLH_3156 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLH_0409 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_0412 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_1556 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_1553 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_0426 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_3254 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLH_0172 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLH_0173 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLH_0174 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLH_0434 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLH_3355 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLH_3359 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLH_3363 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLH_0190 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLH_1834 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLH_0414 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLH_0421 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLH_2689 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLH_3357 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLH_3361 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLH_3365 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLH_0407 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0418 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0411 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0417 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0424 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0425 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLH_0413 tRNA-His K14226 tRNA-His; tRNA His
D CLH_0420 tRNA-His K14226 tRNA-His; tRNA His
D CLH_0185 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLH_0431 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLH_0155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_0158 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_0161 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_0416 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_0423 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_2524 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLH_3306 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_0419 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_0415 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_1557 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_0422 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_3301 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_1554 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLH_0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_3157 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_0157 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_0160 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_0156 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_0159 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_1017 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLH_0189 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLH_3129 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLH_0406 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLH_0410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLH_0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLH_0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLH_0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLH_0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLH_3230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLH_0221 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLH_0502 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLH_3358 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLH_3362 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLH_0505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLH_0527 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLH_0529 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLH_0500 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLH_0506 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLH_0503 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLH_0501 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLH_3356 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLH_3364 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLH_3360 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLH_0504 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLH_0008 rrsI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3282 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3292 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3288 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3310 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3296 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3172 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_0183 rrsJ; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3278 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_0430 rrsK; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3161 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLH_3170 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3290 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3286 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3308 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3280 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3276 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_0010 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3294 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3159 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_0187 rrlJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_0433 rrlK; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLH_3158 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3169 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3307 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_0011 rrfI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3130 rrfM; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_0188 rrfJ; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3285 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3293 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3289 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3302 rrfN; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3275 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3279 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLH_3455 srpB; Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D CLH_3420 Bacterial RNase P class A K01978 rnpB; M1 RNA
D CLH_0651 ssrA; ssrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CLH_1949 morphine 6-dehydrogenase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D CLH_3081 putative xanthine dehydrogenase, iron-sulfur binding subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CLH_0948 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D CLH_2006 FMN-dependent NADH-azoreductase family protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CLH_2510 cotJC protein K07217 ydbD; manganese catalase [EC:1.11.1.6]
D CLH_3064 putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CLH_2671 putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CLH_1604 periplasmic [Fe] hydrogenase 1 K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D CLH_1644 iron hydrogenase 1 K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D CLH_0034 hydrogenase-1 K00532 E1.12.7.2; ferredoxin hydrogenase [EC:1.12.7.2]
D CLH_0626 conserved electron-transfer protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CLH_2957 conserved electron-transfer protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CLH_2801 gltD; glutamate synthase, small subunit K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CLH_2040 arsenate reductase family protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CLH_0115 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CLH_2338 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLH_1662 glycyl-radical enzyme activating family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLH_0064 radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLH_1377 glycyl-radical enzyme activating family protein K20037 cutD; choline trimethylamine-lyase activating enzyme [EC:1.97.1.-]
D CLH_2195 methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D CLH_1819 transferase, hexapeptide repeat family K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CLH_1975 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CLH_1985 acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D CLH_1546 unknwon conserved protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D CLH_2224 glycosyl transferase, group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CLH_0103 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CLH_1937 ATP:cob(I)alamin adenosyltransferase K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-]
D CLH_1178 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CLH_3298 protein YqfL K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D CLH_0211 DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D CLH_0293 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CLH_1334 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CLH_0842 spoIIAB; anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D CLH_2574 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D CLH_0204 putative ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D CLH_2019 thioesterase family protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D CLH_0162 spoIIE; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D CLH_3211 exopolysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CLH_2571 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CLH_2047 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CLH_3377 DHH family protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D CLH_0870 membrane protein containing HD superfamily hydrolase domain K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D CLH_0097 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CLH_0099 primase homolog K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D CLH_1701 putative phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CLH_2354 D-alanyl-D-alanine carboxypeptidase family K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D CLH_3043 probable N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_2101 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLH_2491 polypeptide deformylase family protein K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLH_1166 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLH_1437 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLH_2353 peptidoglycan N-acetylglucosamine deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLH_0726 polysaccharide deacetylase domain protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLH_0435 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLH_1464 GlcNAc-PI de-N-acetylase family K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D CLH_2221 pdaA; delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D CLH_0589 hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D CLH_0638 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CLH_0591 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CLH_2281 uvdE; UV damage endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D CLH_1872 4-hydroxyphenylacetate decarboxylase, catalytic subunit K18427 hpdB; 4-hydroxyphenylacetate decarboxylase large subunit [EC:4.1.1.83]
D CLH_1871 4-hydroxyphenylacetate decarboxylase, regulatory subunit K18428 hpdC; 4-hydroxyphenylacetate decarboxylase small subunit [EC:4.1.1.83]
D CLH_1683 splB; spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D CLH_2556 myosin-cross-reactive antigen family protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D CLH_3111 YjeF family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CLH_0586 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D CLH_1376 formate C-acetyltransferase K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4]
D CLH_0609 hgdC; 2-hydroxyglutaryl-CoA dehydratase component A K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLH_0462 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D CLH_1425 ATPase, P-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLH_0835 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLH_0345 cation-transporting ATPase, P-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLH_0847 ATPase family protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLH_0359 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D CLH_1346 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D CLH_3256 P-type ATPase - metal cation transport K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
D CLH_1345 ATPase, P-type K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D CLH_2039 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D CLH_1939 glycerol dehydratase reactivation factor large subunit K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D CLH_1938 glycerol dehydratase reactivation factor, small subunit K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D CLH_0106 conserved domain protein K05337 fer; ferredoxin
D CLH_1121 nifU; FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D CLH_0671 flavodoxin K03839 fldA; flavodoxin I
D CLH_0363 electron transfer flavoprotein, beta subunit/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D CLH_1053 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D CLH_2636 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D CLH_2817 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D CLH_0110 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D CLH_2720 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CLH_0450 ethanolamine transporter K04023 eutH; ethanolamine transporter
D CLH_1849 ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ
D CLH_1381 ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ
D CLH_1379 GTP-binding protein K04029 eutP; ethanolamine utilization protein EutP
D CLH_1386 transcriptional regulator K04030 eutQ; ethanolamine utilization protein EutQ
D CLH_1378 ethanolamine utilization protein EutS homolog K04031 eutS; ethanolamine utilization protein EutS
D CLH_1540 glyoxalase I K08234 yaeR; glyoxylase I family protein
D CLH_2202 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CLH_0291 spore-cortex-lytic enzyme, sleb K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D CLH_0086 ABC1 family protein kinase K03688 ubiB; ubiquinone biosynthesis protein
D CLH_3152 aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
D CLH_1384 respiratory-chain NADH dehydrogenase domain, 51 kda subunit K27271 pduS; cobalamin reductase
D CLH_1845 ethanolamine utilization Fe-S center protein eut K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CLH_0382 glucitol operon activator protein K02466 gutM; glucitol operon activator protein
D CLH_2506 antirepressor, phage associated K07741 antB; anti-repressor protein
D CLH_0518 protein tex K06959 tex; protein Tex
D CLH_1161 protein YlzA K09777 remA; extracellular matrix regulatory protein A
D CLH_0005 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D CLH_0154 putative RNA-binding protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D CLH_0203 McsA K19411 mcsA; protein arginine kinase activator
D CLH_2619 tig; trigger factor K03545 tig; trigger factor
D CLH_2802 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CLH_1600 hypC; hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D CLH_1602 hydrogenase isoenzymes formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D CLH_1601 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CLH_1599 hypF; [NiFe] hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D CLH_1205 Mg chelatase family protein K07391 comM; magnesium chelatase family protein
D CLH_0605 selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 xdhC; xanthine dehydrogenase accessory factor
D CLH_0611 putative xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D CLH_0713 ribonuclease HI K06993 K06993; ribonuclease H-related protein
D CLH_0547 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D CLH_1204 conserved hypothetical protein K07460 yraN; putative endonuclease
D CLH_0313 GIY-YIG domain protein K07461 K07461; putative endonuclease
D CLH_1206 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D CLH_2120 conserved hypothetical protein K07474 xtmA; phage terminase small subunit
D CLH_1108 ATPase, AAA family K07478 ycaJ; putative ATPase
D CLH_1118 ATPase, AAA family K07478 ycaJ; putative ATPase
D CLH_0130 putative primase K06919 K06919; putative DNA primase/helicase
D CLH_2433 transposase, family K07496 K07496; putative transposase
D CLH_0133 phage integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D CLH_0539 phage shock protein A K03969 pspA; phage shock protein A
D CLH_3225 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CLH_2058 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLH_0320 putative multidrug efflux pump, membrane protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D CLH_3332 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CLH_1258 Na+/myo-inositol cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CLH_2654 sodium transporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CLH_2687 sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CLH_2732 sodium/proline symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CLH_0037 sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CLH_0925 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLH_0935 amino acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLH_2922 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CLH_1013 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CLH_0699 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CLH_1494 nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D CLH_3222 bofA; sigma-K factor processing regulatory protein BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D CLH_0795 conserved hypothetical protein K06320 cgeB; spore maturation protein CgeB
D CLH_2788 cotJB; CotJB protein K06333 cotJB; spore coat protein JB
D CLH_2789 cotJC; CotJC protein K06334 cotJC; spore coat protein JC
D CLH_3395 protein jag K06346 jag; spoIIIJ-associated protein
D CLH_0083 spmA; spore maturation protein A K06373 spmA; spore maturation protein A
D CLH_0084 spmB; spore maturation protein B K06374 spmB; spore maturation protein B
D CLH_0841 spoIIAA; anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D CLH_2151 spoIIM; stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D CLH_0852 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D CLH_0464 spoIIR; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D CLH_2180 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D CLH_2179 spoIIIAB; stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D CLH_2178 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D CLH_2177 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D CLH_2176 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D CLH_2175 spoIIIAF; stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D CLH_2174 spoIIIAG; stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D CLH_2173 putative stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH
D CLH_1156 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D CLH_2476 site-specific DNA recombinase K06400 spoIVCA; site-specific DNA recombinase
D CLH_1763 putative resolvase K06400 spoIVCA; site-specific DNA recombinase
D CLH_0844 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D CLH_0845 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D CLH_0846 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D CLH_2311 stage V sporulation protein AF K06408 spoVAF; stage V sporulation protein AF
D CLH_0139 spoVG; stage V sporulation protein G K06412 spoVG; stage V sporulation protein G
D CLH_2837 stage V sporulation protein R K06415 spoVR; stage V sporulation protein R
D CLH_1240 spoVS; stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D CLH_0792 cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D CLH_0719 conserved domain protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D CLH_0531 small, acid-soluble spore protein beta K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D CLH_0458 sporulation peptidase YabG K06436 yabG; spore coat assemly protein
D CLH_0869 yqfD; sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D CLH_2914 spore germination protein K06297 gerKC; spore germination protein KC
C 99993 Cell motility
D CLH_2449 TfoX C-domain superfamily K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D CLH_1131 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CLH_1880 ACT domain protein K07166 K07166; ACT domain-containing protein
D CLH_2839 serine protein kinase K07180 prkA; serine protein kinase
C 99992 Structural proteins
D CLH_2820 muramidase K07273 acm; lysozyme
D CLH_0905 glycosyl hydrolase, family 25 K07273 acm; lysozyme
D CLH_2072 lysozyme M1 K07273 acm; lysozyme
D CLH_2086 putative secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein
D CLH_2561 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CLH_1854 propanediol utilization protein PduB K27263 pduB; bacterial microcompartment shell protein
D CLH_1852 propanediol utilization protein PduA K27266 pduJ; bacterial microcompartment shell protein
D CLH_1853 putative propanediol utilization protein K27267 pduK; bacterial microcompartment shell protein
D CLH_1385 microcompartments protein K27272 pduT; bacterial microcompartment shell protein
D CLH_1844 ethanolamine utilization protein EutM K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D CLH_1152 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D CLH_3141 nitrogen-fixing NifU domain protein K02192 bfd; bacterioferritin-associated ferredoxin
D CLH_2219 integral membrane protein TerC K05794 terC; tellurite resistance protein TerC
D CLH_0683 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D CLH_1391 iron-binding protein, hemerythrin K07216 hr; hemerythrin
D CLH_1282 hemerythrin binding domain protein K07216 hr; hemerythrin
D CLH_2796 DNA binding domain, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein
D CLH_1992 conserved membrane protein YvaZ K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CLH_0048 acetyltransferase K02348 elaA; ElaA protein
D CLH_0923 putative hydrolase K04477 ycdX; putative hydrolase
D CLH_3297 phospholipase, patatin family K07001 K07001; NTE family protein
D CLH_2854 conserved protein YqhO K07001 K07001; NTE family protein
D CLH_0791 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D CLH_1536 conserved hypothetical protein K07038 K07038; inner membrane protein
D CLH_3115 YihY family protein K07058 K07058; membrane protein
D CLH_2358 membrane protein, DedA family K03975 dedA; membrane-associated protein
D CLH_1500 putative phage infection protein K01421 yhgE; putative membrane protein
D CLH_2392 phage infection protein K01421 yhgE; putative membrane protein
D CLH_2393 phage infection protein K01421 yhgE; putative membrane protein
D CLH_2718 putative membrane protein K08974 K08974; putative membrane protein
D CLH_0050 bacterial membrane flanked domain protein K08981 K08981; putative membrane protein
D CLH_1807 phnA; alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D CLH_2737 heme biosynthesis K06871 K06871; uncharacterized protein
D CLH_1533 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D CLH_1714 conserved hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein
D CLH_1719 conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein
D CLH_1858 sodium:dicarboxylate symporter family protein K06956 K06956; uncharacterized protein
D CLH_1198 conserved domain protein K06960 K06960; uncharacterized protein
D CLH_0219 tetracycline resistance protein K06962 K06962; uncharacterized protein
D CLH_3243 conserved hypothetical protein K06971 K06971; uncharacterized protein
D CLH_1168 conserved protein YugP K06973 K06973; uncharacterized protein
D CLH_2764 pts system, fructose-specific iibc component K07035 K07035; uncharacterized protein
D CLH_1070 putative membrane protein K07035 K07035; uncharacterized protein
D CLH_1821 conserved domain protein K07069 K07069; uncharacterized protein
D CLH_1281 putative permease K07089 K07089; uncharacterized protein
D CLH_3273 transporter K07090 K07090; uncharacterized protein
D CLH_0405 phosphodiesterase, family K07095 K07095; uncharacterized protein
D CLH_1969 phosphoesterase K07098 K07098; uncharacterized protein
D CLH_1272 Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein
D CLH_2910 Ser/Thr protein phosphatase family protein K07099 K07099; uncharacterized protein
D CLH_0015 transcriptional regulator, biotin repressor family K07105 K07105; uncharacterized protein
D CLH_0051 short chain dehydrogenase K07124 K07124; uncharacterized protein
D CLH_1654 Sel1 repeat family K07126 K07126; uncharacterized protein
D CLH_0295 oxidoreductase, FAD-binding K07137 K07137; uncharacterized protein
D CLH_0067 radical SAM protein, family K07139 K07139; uncharacterized protein
D CLH_2426 integral membrane protein K07149 K07149; uncharacterized protein
D CLH_0706 putative membrane protein K07149 K07149; uncharacterized protein
D CLH_0972 putative membrane protein K07150 K07150; uncharacterized protein
D CLH_0867 GatB/Yqey domain protein K09117 K09117; uncharacterized protein
D CLH_1879 conserved hypothetical protein K09157 K09157; uncharacterized protein
D CLH_0049 bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein
D CLH_0761 conserved hypothetical protein K09749 K09749; uncharacterized protein
D CLH_2031 conserved hypothetical protein K09749 K09749; uncharacterized protein
D CLH_1489 conserved hypothetical protein K09764 K09764; uncharacterized protein
D CLH_2907 conserved hypothetical protein K09766 K09766; uncharacterized protein
D CLH_0390 Emg2 protein K09768 K09768; uncharacterized protein
D CLH_2308 conserved hypothetical protein K09770 K09770; uncharacterized protein
D CLH_2318 conserved domain protein K09779 K09779; uncharacterized protein
D CLH_1242 putative membrane protein K09779 K09779; uncharacterized protein
D CLH_2838 yhbH; sporulation protein YhbH K09786 K09786; uncharacterized protein
D CLH_1195 helix-turn-helix protein, YlxM/p13 family K09787 K09787; uncharacterized protein
D CLH_3068 conserved hypothetical protein K09790 K09790; uncharacterized protein
D CLH_2312 S1 RNA binding domain protein K00243 K00243; uncharacterized protein
D CLH_2088 conserved hypothetical protein K09861 K09861; uncharacterized protein
D CLH_2451 protein YieJ K09925 K09925; uncharacterized protein
D CLH_1419 outer surface protein K09963 K09963; uncharacterized protein
D CLH_0563 conserved hypothetical protein K07584 ysxB; uncharacterized protein
D CLH_3333 protein of unknown function K07220 K07220; uncharacterized protein
D CLH_1222 conserved hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 17, 2024