+D GENES KO #

  KEGG Orthology (KO) - Ruminiclostridium cellulolyticum

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cce00010] D Ccel_3221 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Ccel_0700 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Ccel_1445 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Ccel_2612 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Ccel_2223 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Ccel_2222 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Ccel_2373 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Ccel_2260 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Ccel_2275 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Ccel_2259 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Ccel_0175 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Ccel_2140 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Ccel_2254 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Ccel_2569 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Ccel_1164 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Ccel_0016 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Ccel_0554 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Ccel_0555 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Ccel_2485 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Ccel_0137 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Ccel_3198 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Ccel_1009 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Ccel_0494 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_1469 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_1431 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Ccel_1417 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Ccel_0212 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:cce00020] D Ccel_2571 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Ccel_2177 pyruvate carboxyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D Ccel_2176 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Ccel_2576 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Ccel_0554 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Ccel_0555 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Ccel_0556 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Ccel_0553 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Ccel_2422 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Ccel_2421 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Ccel_0932 Carbamoyl-phosphate synthase L chain ATP-binding K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Ccel_0212 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Ccel_1164 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Ccel_0016 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:cce00030] D Ccel_1445 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Ccel_1537 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Ccel_3415 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Ccel_0259 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Ccel_1640 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Ccel_1028 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Ccel_3225 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D Ccel_3205 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Ccel_1417 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Ccel_3092 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Ccel_3192 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Ccel_1672 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Ccel_3191 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Ccel_1671 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Ccel_2222 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Ccel_2373 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Ccel_2612 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Ccel_2223 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:cce00040] D Ccel_1246 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D Ccel_2243 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2] D Ccel_1676 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D Ccel_0214 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D Ccel_0140 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Ccel_1674 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Ccel_0139 Mannitol dehydrogenase domain protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D Ccel_1670 glycoside hydrolase family 2 TIM barrel K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D Ccel_3407 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Ccel_1009 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Ccel_3467 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Ccel_1537 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Ccel_1033 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D Ccel_1006 carbohydrate kinase FGGY K00854 xylB; xylulokinase [EC:2.7.1.17] D Ccel_3431 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D Ccel_3429 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Ccel_0320 YdaE K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15] D Ccel_2189 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Ccel_1029 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Ccel_1007 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Ccel_1030 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Ccel_1265 dihydrodipicolinate synthetase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28] D Ccel_1290 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:cce00051] D Ccel_0379 protein of unknown function DUF291 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Ccel_0752 glycoside hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Ccel_0429 PKD domain containing protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Ccel_1551 glycoside hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Ccel_0954 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Ccel_1179 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Ccel_1940 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Ccel_0348 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Ccel_3452 Nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Ccel_3441 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Ccel_3442 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Ccel_1290 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Ccel_3221 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Ccel_2612 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Ccel_2223 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Ccel_2189 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Ccel_1029 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Ccel_1007 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Ccel_1030 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Ccel_3429 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Ccel_2222 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Ccel_2373 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Ccel_2260 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Ccel_0259 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Ccel_1640 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:cce00052] D Ccel_1431 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Ccel_3238 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Ccel_2272 galactose-1-phosphate uridyl transferase domain protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Ccel_3237 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_0367 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_0971 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_2806 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_3407 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Ccel_1417 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Ccel_3221 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Ccel_0700 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Ccel_1013 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Ccel_1239 Carbohydrate binding family 6 K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Ccel_0154 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Ccel_2451 Glycoside hydrolase family 42 domain protein K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D Ccel_3426 glycoside hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22] D Ccel_1597 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Ccel_1237 Carbohydrate binding family 6 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Ccel_2612 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Ccel_2223 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Ccel_1008 D-tagatose-bisphosphate aldolase class II accessory protein AgaZ K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ C 00053 Ascorbate and aldarate metabolism [PATH:cce00053] D Ccel_1670 glycoside hydrolase family 2 TIM barrel K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D Ccel_1009 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Ccel_3467 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] C 00500 Starch and sucrose metabolism [PATH:cce00500] D Ccel_3407 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Ccel_0203 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_2454 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_1139 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_3410 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_0374 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Ccel_1099 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0428 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0840 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_2226 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0755 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_2621 glycoside hydrolase family 9 domain protein Ig domain protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0732 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0731 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0740 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0231 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_2337 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_2392 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_1648 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0734 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0735 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0737 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_1249 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0753 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_2109 glycosyltransferase 36 K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D Ccel_3400 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Ccel_3401 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Ccel_1888 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Ccel_1334 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Ccel_0053 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Ccel_2215 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Ccel_0335 glycoside hydrolase 15-related K01178 SGA1; glucoamylase [EC:3.2.1.3] D Ccel_3242 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D Ccel_1417 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Ccel_3221 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Ccel_0700 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Ccel_1445 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Ccel_0954 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cce00520] D Ccel_1550 glycoside hydrolase family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D Ccel_1439 glycosyltransferase 36 K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280] D Ccel_3412 glycosyltransferase 36 K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280] D Ccel_2354 glycosyltransferase 36 K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280] D Ccel_3221 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Ccel_0954 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Ccel_1205 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Ccel_1204 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Ccel_3093 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Ccel_3389 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Ccel_0280 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Ccel_2291 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Ccel_2929 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D Ccel_2807 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Ccel_1221 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Ccel_1255 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Ccel_1549 putative outer membrane protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Ccel_1036 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Ccel_1235 Carbohydrate binding family 6 K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55] D Ccel_1229 Carbohydrate binding family 6 K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55] D Ccel_1231 Carbohydrate binding family 6 K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55] D Ccel_3448 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D Ccel_1259 glycoside hydrolase family 39 K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Ccel_3438 glycoside hydrolase family 43 K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Ccel_1233 Carbohydrate binding family 6 K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Ccel_0700 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Ccel_1417 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Ccel_3407 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Ccel_3238 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Ccel_2272 galactose-1-phosphate uridyl transferase domain protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Ccel_3237 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_0367 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_0971 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_2806 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_1445 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Ccel_1179 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Ccel_1940 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Ccel_0348 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Ccel_3452 Nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Ccel_3441 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Ccel_3442 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Ccel_0969 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10] D Ccel_3400 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Ccel_3401 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cce00620] D Ccel_0494 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_1469 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_1164 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Ccel_0016 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Ccel_0554 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Ccel_0555 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Ccel_2582 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Ccel_2224 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Ccel_3198 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Ccel_1009 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Ccel_2136 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Ccel_2137 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Ccel_2569 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Ccel_0936 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Ccel_0933 biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Ccel_0934 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Ccel_0935 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Ccel_2485 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Ccel_0137 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Ccel_1035 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Ccel_1949 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Ccel_0138 malic protein NAD-binding K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Ccel_1736 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Ccel_0932 Carbamoyl-phosphate synthase L chain ATP-binding K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Ccel_2422 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Ccel_2421 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Ccel_0212 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Ccel_3433 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Ccel_3434 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Ccel_1624 pyruvate carboxyltransferase K10977 aksA; methanogen homocitrate synthase [EC:2.3.3.14 2.3.3.-] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cce00630] D Ccel_0494 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_1469 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_2571 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Ccel_2176 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Ccel_3425 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Ccel_2097 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Ccel_0561 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Ccel_1680 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Ccel_2611 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Ccel_2567 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D Ccel_3192 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Ccel_1672 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] C 00640 Propanoate metabolism [PATH:cce00640] D Ccel_0494 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_1469 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_2136 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Ccel_2137 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Ccel_2582 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Ccel_2224 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Ccel_0936 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Ccel_0933 biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Ccel_0934 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Ccel_0935 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Ccel_2485 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Ccel_0137 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Ccel_2556 MGS domain protein K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D Ccel_1391 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:cce00650] D Ccel_0986 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Ccel_2273 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Ccel_3198 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Ccel_1737 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Ccel_2567 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D Ccel_0981 Pyridoxal-dependent decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Ccel_2582 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Ccel_2224 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Ccel_1164 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Ccel_0016 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Ccel_0554 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Ccel_0555 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Ccel_3437 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Ccel_0303 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Ccel_3436 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:cce00660] D Ccel_3437 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Ccel_0303 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Ccel_3436 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Ccel_0126 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Ccel_1622 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Ccel_0127 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Ccel_1621 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Ccel_0128 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cce00562] D Ccel_2471 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Ccel_2260 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cce00190] D Ccel_2305 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Ccel_2304 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Ccel_2303 hydrogenase, Fe-only K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Ccel_1112 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Ccel_0270 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Ccel_0272 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Ccel_0271 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Ccel_0269 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Ccel_0273 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Ccel_0266 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Ccel_0268 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Ccel_0267 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Ccel_0248 DHHA2 domain protein K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D Ccel_0012 HAD-superfamily hydrolase, subfamily IA, variant 1 K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cce00680] D Ccel_0438 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Ccel_2918 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Ccel_1680 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Ccel_3425 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Ccel_2254 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Ccel_2222 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Ccel_2373 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Ccel_2612 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Ccel_2223 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Ccel_2136 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Ccel_2137 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Ccel_0494 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_1469 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_2259 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Ccel_0175 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Ccel_2140 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Ccel_1189 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Ccel_1624 pyruvate carboxyltransferase K10977 aksA; methanogen homocitrate synthase [EC:2.3.3.14 2.3.3.-] D Ccel_1039 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00910 Nitrogen metabolism [PATH:cce00910] D Ccel_1616 NifH/frxC-family protein K02588 nifH; nitrogenase iron protein NifH D Ccel_0749 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Ccel_1424 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Ccel_2430 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Ccel_0561 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Ccel_2545 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Ccel_0844 conserved hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:cce00920] D Ccel_0459 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Ccel_1634 molybdopterin oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D Ccel_3325 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Ccel_0413 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Ccel_3186 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Ccel_3331 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cce00061] D Ccel_0936 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Ccel_0933 biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Ccel_0934 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Ccel_0935 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Ccel_0685 acyl carrier protein K02078 acpP; acyl carrier protein D Ccel_1216 conserved hypothetical protein K02078 acpP; acyl carrier protein D Ccel_3253 hypothetical protein K02078 acpP; acyl carrier protein D Ccel_3256 phosphopantetheine-binding K02078 acpP; acyl carrier protein D Ccel_2375 conserved hypothetical protein K02078 acpP; acyl carrier protein D Ccel_2518 phosphopantetheine-binding K02078 acpP; acyl carrier protein D Ccel_0683 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_0975 Acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_2328 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_2380 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_0682 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Ccel_1215 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Ccel_2885 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Ccel_2887 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Ccel_0686 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0866 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0867 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0868 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0684 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_2089 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_0872 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_0911 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_3097 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Ccel_2273 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Ccel_0896 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_1369 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_2472 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_3252 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_1626 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cce00071] D Ccel_0896 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_1369 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_2472 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_3252 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_1626 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_3198 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cce00561] D Ccel_2611 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Ccel_1009 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Ccel_1639 Dak kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D Ccel_1638 dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D Ccel_2595 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Ccel_1031 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Ccel_0681 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Ccel_2130 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Ccel_1316 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Ccel_0577 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Ccel_0034 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Ccel_3207 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Ccel_0371 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Ccel_1807 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Ccel_3426 glycoside hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22] D Ccel_1597 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Ccel_1237 Carbohydrate binding family 6 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:cce00564] D Ccel_2129 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Ccel_2130 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Ccel_1316 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Ccel_0577 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Ccel_0448 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Ccel_0011 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Ccel_2613 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Ccel_0679 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Ccel_0582 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Ccel_1463 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D Ccel_2486 3-dehydroquinate synthase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D Ccel_1057 pyridine nucleotide-disulphide oxidoreductase domain protein K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] D Ccel_1058 HI0933 family protein K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:cce00600] D Ccel_1013 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Ccel_1239 Carbohydrate binding family 6 K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Ccel_0154 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Ccel_3426 glycoside hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22] D Ccel_1597 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Ccel_1237 Carbohydrate binding family 6 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cce00230] D Ccel_1753 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Ccel_3205 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Ccel_1417 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Ccel_3092 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Ccel_2184 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Ccel_2180 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Ccel_2182 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Ccel_0499 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Ccel_2183 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Ccel_2185 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Ccel_0385 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Ccel_0723 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Ccel_2181 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Ccel_0414 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Ccel_1952 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Ccel_2519 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Ccel_1174 metallophosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Ccel_1080 PfkB domain protein K22026 K22026; nucleoside kinase [EC:2.7.1.73 2.7.1.213 2.7.1.-] D Ccel_3381 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Ccel_0607 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Ccel_0084 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Ccel_0394 IMP dehydrogenase/GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Ccel_1353 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Ccel_1405 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D Ccel_2202 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Ccel_1791 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Ccel_2401 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Ccel_0702 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Ccel_1804 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Ccel_1803 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Ccel_1951 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Ccel_3227 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D Ccel_1831 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D Ccel_2092 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Ccel_2419 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Ccel_0606 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Ccel_0779 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Ccel_3086 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] C 00240 Pyrimidine metabolism [PATH:cce00240] D Ccel_0616 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Ccel_2914 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Ccel_0615 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Ccel_2913 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Ccel_0612 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Ccel_0613 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Ccel_0618 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Ccel_0617 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Ccel_0614 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Ccel_0444 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Ccel_3086 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Ccel_2565 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Ccel_0291 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Ccel_1729 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Ccel_1435 AAA ATPase K00876 udk; uridine kinase [EC:2.7.1.48] D Ccel_2519 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Ccel_1174 metallophosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Ccel_1081 purine or other phosphorylase family 1 K00757 udp; uridine phosphorylase [EC:2.4.2.3] D Ccel_0260 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Ccel_0611 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Ccel_0606 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Ccel_1750 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Ccel_1080 PfkB domain protein K22026 K22026; nucleoside kinase [EC:2.7.1.73 2.7.1.213 2.7.1.-] D Ccel_0578 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Ccel_0909 Amidohydrolase 3 K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Ccel_0702 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Ccel_2401 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Ccel_1803 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Ccel_0261 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Ccel_2513 Thymidylate kinase-like protein K00943 tmk; dTMP kinase [EC:2.7.4.9] D Ccel_0156 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Ccel_0177 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Ccel_1309 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cce00250] D Ccel_1965 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Ccel_3479 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Ccel_2575 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Ccel_1721 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3] D Ccel_1345 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Ccel_1344 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Ccel_2419 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Ccel_0723 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Ccel_0612 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Ccel_0981 Pyridoxal-dependent decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Ccel_2545 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Ccel_2430 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Ccel_0561 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Ccel_0616 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Ccel_2914 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Ccel_0615 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Ccel_2913 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Ccel_1205 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Ccel_2184 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cce00260] D Ccel_0528 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Ccel_2591 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Ccel_1452 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Ccel_1450 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Ccel_0635 aromatic amino acid beta-eliminating lyase/threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Ccel_1680 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Ccel_3425 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Ccel_2611 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Ccel_2259 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Ccel_0175 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Ccel_2140 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Ccel_1189 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Ccel_1778 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Ccel_0011 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Ccel_1149 Methyltransferase type 11 K18896 gsmt; glycine/sarcosine N-methyltransferase [EC:2.1.1.156] D Ccel_3219 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Ccel_1084 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Ccel_3218 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Ccel_2450 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cce00270] D Ccel_3325 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Ccel_0413 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Ccel_3186 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Ccel_3185 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Ccel_2474 methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D Ccel_0087 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Ccel_2843 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Ccel_1092 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Ccel_1358 purine or other phosphorylase family 1 K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Ccel_1288 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D Ccel_0607 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Ccel_2167 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Ccel_1289 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Ccel_2487 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] D Ccel_2549 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2867 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2841 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2168 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Ccel_0528 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Ccel_2591 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Ccel_1452 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Ccel_3331 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Ccel_1962 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Ccel_3332 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Ccel_1877 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Ccel_1802 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Ccel_1557 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Ccel_1965 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Ccel_2485 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Ccel_0137 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Ccel_1189 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:cce00280] D Ccel_1877 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Ccel_1802 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cce00290] D Ccel_0126 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Ccel_1622 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Ccel_0127 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Ccel_1621 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Ccel_0128 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Ccel_3437 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Ccel_0303 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Ccel_3436 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Ccel_3435 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Ccel_0302 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Ccel_1264 dihydroxy-acid and 6-phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Ccel_1877 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Ccel_1802 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Ccel_3433 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Ccel_3434 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cce00300] D Ccel_1452 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Ccel_0528 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Ccel_2591 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Ccel_1611 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Ccel_0526 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Ccel_0519 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Ccel_0525 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Ccel_1612 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Ccel_2912 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Ccel_2511 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Ccel_2534 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Ccel_3255 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Ccel_2533 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D Ccel_1624 pyruvate carboxyltransferase K10977 aksA; methanogen homocitrate synthase [EC:2.3.3.14 2.3.3.-] D Ccel_0479 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Ccel_0480 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation C 00220 Arginine biosynthesis [PATH:cce00220] D Ccel_2915 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Ccel_1345 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Ccel_1344 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Ccel_3384 amidinotransferase K01478 arcA; arginine deiminase [EC:3.5.3.6] D Ccel_0561 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Ccel_2430 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Ccel_1965 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Ccel_2098 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Ccel_2911 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Ccel_2910 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Ccel_1612 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Ccel_2912 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:cce00330] D Ccel_0909 Amidohydrolase 3 K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Ccel_1119 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Ccel_0425 Orn/Lys/Arg decarboxylase major region K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Ccel_2434 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Ccel_1092 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Ccel_1129 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D Ccel_1778 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Ccel_2653 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Ccel_1755 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Ccel_2877 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Ccel_2594 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Ccel_1965 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:cce00340] D Ccel_0381 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Ccel_0380 histidyl-tRNA synthetase 2 K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Ccel_0389 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Ccel_0387 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Ccel_0386 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Ccel_0388 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Ccel_0384 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Ccel_0383 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Ccel_1042 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Ccel_1927 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Ccel_0382 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Ccel_1778 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:cce00350] D Ccel_1965 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Ccel_0383 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Ccel_1042 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Ccel_1039 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D Ccel_1778 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Ccel_3198 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:cce00360] D Ccel_1778 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Ccel_0669 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Ccel_1756 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Ccel_1218 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Ccel_1392 coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Ccel_1701 thioesterase superfamily protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D Ccel_0986 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Ccel_1965 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Ccel_0383 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Ccel_1042 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Ccel_0659 GCN5-related N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D Ccel_2653 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:cce00380] D Ccel_1778 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Ccel_2653 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cce00400] D Ccel_2071 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Ccel_2880 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Ccel_1618 phospho-2-dehydro-3-deoxyheptonate aldolase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5] D Ccel_1854 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Ccel_2373 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Ccel_1924 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Ccel_0372 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Ccel_2426 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Ccel_2428 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Ccel_2427 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Ccel_3213 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Ccel_3214 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Ccel_3215 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Ccel_3217 N-(5'phosphoribosyl)anthranilate isomerase (PRAI) K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Ccel_3216 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Ccel_3219 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Ccel_1084 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Ccel_3218 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Ccel_2450 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Ccel_1730 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D Ccel_1451 amino acid-binding ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D Ccel_2881 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Ccel_0078 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Ccel_1965 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Ccel_0383 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Ccel_1042 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cce00410] D Ccel_1785 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Ccel_1039 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D Ccel_0981 Pyridoxal-dependent decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Ccel_1786 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:cce00430] D Ccel_0981 Pyridoxal-dependent decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Ccel_2137 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Ccel_2136 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:cce00450] D Ccel_3185 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Ccel_2474 methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D Ccel_1876 cysteine desulfurase family protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Ccel_0360 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Ccel_1779 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Ccel_1098 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Ccel_0205 tRNA synthetase class I (M) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cce00460] D Ccel_0203 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_2454 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_1139 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_3410 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_0374 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Ccel_2575 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Ccel_1680 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cce00470] D Ccel_2926 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Ccel_0283 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Ccel_3402 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Ccel_1726 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Ccel_2511 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Ccel_2534 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Ccel_3255 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:cce00480] D Ccel_1557 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Ccel_2576 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:cce00515] D Ccel_2417 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:cce00514] D Ccel_2417 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:cce00511] D Ccel_1013 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Ccel_1239 Carbohydrate binding family 6 K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Ccel_0154 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Ccel_1020 conserved hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] D Ccel_1241 Carbohydrate binding family 6 K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:cce00542] D Ccel_0262 UDP-N-acetylglucosamine 2-epimerase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cce00541] D Ccel_3407 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Ccel_3237 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_0367 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_0971 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_2806 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Ccel_1091 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Ccel_0969 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10] D Ccel_1179 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Ccel_3452 Nucleotidyl transferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Ccel_3441 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Ccel_3442 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Ccel_3093 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Ccel_2929 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D Ccel_2807 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] C 00550 Peptidoglycan biosynthesis [PATH:cce00550] D Ccel_3389 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Ccel_0280 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Ccel_2291 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Ccel_3096 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Ccel_1726 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Ccel_0479 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Ccel_0283 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Ccel_0480 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Ccel_0447 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Ccel_1147 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Ccel_1555 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Ccel_3348 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Ccel_0481 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Ccel_0483 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Ccel_2876 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Ccel_2560 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Ccel_1486 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Ccel_0478 penicillin-binding protein transpeptidase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Ccel_2476 penicillin-binding protein transpeptidase K05364 pbpA; penicillin-binding protein A D Ccel_1749 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_1370 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_0487 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_0520 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_2069 domain of unknown function DUF1727 K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D Ccel_2070 CobB/CobQ domain protein glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:cce00552] D Ccel_1147 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Ccel_1555 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Ccel_3348 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Ccel_0262 UDP-N-acetylglucosamine 2-epimerase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Ccel_2921 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Ccel_0666 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Ccel_1717 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Ccel_0034 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Ccel_3207 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Ccel_0371 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Ccel_1807 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cce00543] D Ccel_0262 UDP-N-acetylglucosamine 2-epimerase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Ccel_1988 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D Ccel_3325 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cce00730] D Ccel_1991 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Ccel_1992 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Ccel_1932 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Ccel_1684 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Ccel_1683 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Ccel_3104 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Ccel_1900 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Ccel_1990 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Ccel_1989 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Ccel_1536 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Ccel_0930 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Ccel_1538 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Ccel_0779 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cce00740] D Ccel_2004 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Ccel_2006 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Ccel_2003 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Ccel_2005 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Ccel_0461 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Ccel_1990 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Ccel_1753 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:cce00750] D Ccel_1450 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Ccel_1858 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Ccel_1859 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:cce00760] D Ccel_3479 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Ccel_3480 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Ccel_3478 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Ccel_2987 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Ccel_3381 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Ccel_2519 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Ccel_1174 metallophosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Ccel_1363 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Ccel_3086 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Ccel_2937 NUDIX hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D Ccel_1200 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Ccel_1872 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Ccel_1898 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:cce00770] D Ccel_3437 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Ccel_0303 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Ccel_3436 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Ccel_3435 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Ccel_0302 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Ccel_1264 dihydroxy-acid and 6-phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Ccel_1787 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Ccel_1786 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Ccel_0705 pantothenate kinase K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33] D Ccel_0136 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Ccel_3187 DNA/pantothenate metabolism flavoprotein domain protein K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5] D Ccel_3188 flavoprotein K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36] D Ccel_3086 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Ccel_1880 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Ccel_2074 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Ccel_0030 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Ccel_0671 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Ccel_1877 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Ccel_1802 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Ccel_1785 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Ccel_1039 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00780 Biotin metabolism [PATH:cce00780] D Ccel_0686 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0866 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0867 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0868 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0684 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_2089 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_0872 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_0911 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_3097 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Ccel_3189 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] D Ccel_0134 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:cce00790] D Ccel_1328 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Ccel_0930 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Ccel_1331 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Ccel_1332 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Ccel_1330 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Ccel_1310 dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Ccel_1447 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Ccel_2004 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Ccel_1604 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Ccel_1603 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Ccel_1601 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Ccel_1606 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Ccel_1598 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:cce00670] D Ccel_1310 dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Ccel_0018 formate-tetrahydrofolate ligase FTHFS K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Ccel_0604 tetrahydrofolate dehydrogenase/cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Ccel_1680 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Ccel_2182 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Ccel_2181 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Ccel_1529 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Ccel_2474 methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D Ccel_1309 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Ccel_2164 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cce00860] D Ccel_2139 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Ccel_1274 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like protein K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Ccel_1280 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Ccel_1279 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Ccel_1277 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Ccel_1278 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D Ccel_1281 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D Ccel_1271 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Ccel_1275 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D Ccel_1272 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Ccel_1273 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Ccel_1276 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D Ccel_1270 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D Ccel_1282 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D Ccel_1285 Precorrin-8X methylmutase CbiC/CobH K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Ccel_1283 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Ccel_1333 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Ccel_1284 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Ccel_1286 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Ccel_0644 cobalbumin biosynthesis protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Ccel_0645 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Ccel_0646 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Ccel_1287 aminotransferase class I and II K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D Ccel_1670 glycoside hydrolase family 2 TIM barrel K01195 uidA; beta-glucuronidase [EC:3.2.1.31] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cce00130] D Ccel_1113 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Ccel_1994 conserved hypothetical protein K09834 VTE1; tocopherol cyclase [EC:5.5.1.24] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cce00900] D Ccel_1900 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Ccel_0449 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Ccel_0342 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Ccel_0022 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Ccel_0344 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Ccel_0451 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Ccel_1728 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Ccel_1902 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Ccel_0447 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Ccel_3415 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D Ccel_1091 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics [PATH:cce01055] D Ccel_2344 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D Ccel_1091 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:cce00946] D Ccel_0203 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_2454 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_1139 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_3410 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_0374 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:cce00311] D Ccel_0210 Acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41] D Ccel_0725 Beta-lactamase class A-like protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:cce00332] D Ccel_2877 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Ccel_2594 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cce00261] D Ccel_2344 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D Ccel_0528 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Ccel_2591 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Ccel_1611 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Ccel_0526 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Ccel_0519 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Ccel_0525 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cce00521] D Ccel_3221 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Ccel_0700 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Ccel_1417 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Ccel_2471 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Ccel_1091 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis [PATH:cce00524] D Ccel_3221 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Ccel_0700 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D Ccel_1091 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cce00401] D Ccel_2881 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Ccel_1965 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Ccel_0383 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Ccel_1042 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Ccel_3213 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Ccel_3214 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Ccel_0683 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_0975 Acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_2328 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_2380 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_0684 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_2089 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_0872 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_0911 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Ccel_0685 acyl carrier protein K02078 acpP; acyl carrier protein D Ccel_1216 conserved hypothetical protein K02078 acpP; acyl carrier protein D Ccel_3253 hypothetical protein K02078 acpP; acyl carrier protein D Ccel_3256 phosphopantetheine-binding K02078 acpP; acyl carrier protein D Ccel_2375 conserved hypothetical protein K02078 acpP; acyl carrier protein D Ccel_2518 phosphopantetheine-binding K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:cce00999] D Ccel_0087 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Ccel_2843 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Ccel_0203 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_2454 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_1139 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_3410 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Ccel_0374 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites D Ccel_2374 3-dehydroquinate synthase K17835 griH; 3-amino-4-hydroxybenzoic acid synthase [EC:4.1.99.20] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cce00362] D Ccel_1737 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Ccel_0986 3-hydroxyacyl-CoA dehydrogenase NAD-binding K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] C 00627 Aminobenzoate degradation D Ccel_2653 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:cce00625] D Ccel_3198 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Ccel_1616 NifH/frxC-family protein K02588 nifH; nitrogenase iron protein NifH C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:cce00633] D Ccel_1071 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Ccel_1070 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Ccel_0438 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Ccel_2918 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:cce00643] D Ccel_2653 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation D Ccel_1009 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:cce00626] D Ccel_3198 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cce03020] D Ccel_0312 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Ccel_0313 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Ccel_0787 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Ccel_1790 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D Ccel_0660 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cce03010] D Ccel_1728 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Ccel_0442 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Ccel_0764 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Ccel_0786 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Ccel_0775 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Ccel_0055 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Ccel_0316 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Ccel_0772 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Ccel_0795 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Ccel_0757 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Ccel_0785 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Ccel_0315 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Ccel_0784 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Ccel_0771 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Ccel_1708 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Ccel_0710 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Ccel_0767 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Ccel_0057 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Ccel_0075 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Ccel_0762 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Ccel_1979 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Ccel_2094 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Ccel_0309 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Ccel_0761 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Ccel_0758 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Ccel_0759 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Ccel_0770 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Ccel_0773 ribosomal protein L6 signature 1 K02933 RP-L6; large subunit ribosomal protein L6 D Ccel_0311 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Ccel_0081 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Ccel_0310 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Ccel_0308 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Ccel_0794 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Ccel_0768 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Ccel_0777 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Ccel_0765 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Ccel_0788 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Ccel_0774 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Ccel_0714 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Ccel_1313 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Ccel_1320 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Ccel_0763 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Ccel_0760 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Ccel_0769 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Ccel_1322 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Ccel_1883 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Ccel_0766 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Ccel_0776 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Ccel_3375 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Ccel_2134 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Ccel_0305 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Ccel_3491 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Ccel_1312 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Ccel_0783 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Ccel_0314 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A D Ccel_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0059 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0088 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0084 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0036 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0082 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0087 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0039 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0081 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0021 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0086 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cce00970] D Ccel_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Ccel_R0008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Ccel_R0013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Ccel_R0083 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Ccel_R0037 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Ccel_R0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Ccel_R0085 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Ccel_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Ccel_R0070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Ccel_R0011 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Ccel_R0056 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Ccel_R0016 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Ccel_R0062 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Ccel_R0068 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Ccel_R0065 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Ccel_R0035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Ccel_R0045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Ccel_R0053 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Ccel_R0063 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Ccel_R0072 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Ccel_R0077 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Ccel_R0054 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Ccel_R0030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Ccel_R0055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Ccel_R0066 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Ccel_R0033 tRNA-His K14226 tRNA-His; tRNA His D Ccel_R0019 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Ccel_R0025 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Ccel_R0075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Ccel_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Ccel_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Ccel_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Ccel_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Ccel_R0023 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Ccel_R0047 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Ccel_R0048 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Ccel_R0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Ccel_R0064 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Ccel_R0073 tRNA-Met K14230 tRNA-Met; tRNA Met D Ccel_R0017 tRNA-Met K14230 tRNA-Met; tRNA Met D Ccel_R0042 tRNA-Met K14230 tRNA-Met; tRNA Met D Ccel_R0074 tRNA-Met K14230 tRNA-Met; tRNA Met D Ccel_R0043 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Ccel_R0067 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Ccel_R0080 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Ccel_R0049 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Ccel_R0029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Ccel_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Ccel_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Ccel_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Ccel_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Ccel_R0078 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Ccel_R0061 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Ccel_R0046 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Ccel_R0076 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Ccel_R0022 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Ccel_R0044 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Ccel_R0060 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Ccel_R0069 tRNA-Val K14237 tRNA-Val; tRNA Val D Ccel_R0079 tRNA-Val K14237 tRNA-Val; tRNA Val D Ccel_R0071 tRNA-Val K14237 tRNA-Val; tRNA Val D Ccel_R0052 tRNA-Val K14237 tRNA-Val; tRNA Val D Ccel_2139 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Ccel_2436 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Ccel_2437 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Ccel_2435 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Ccel_2096 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Ccel_1946 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Ccel_2574 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Ccel_1789 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Ccel_1372 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Ccel_1373 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Ccel_3183 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Ccel_3324 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Ccel_1098 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Ccel_0205 tRNA synthetase class I (M) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Ccel_1529 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Ccel_1199 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Ccel_3454 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Ccel_1855 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Ccel_0396 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Ccel_0285 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Ccel_0345 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Ccel_1947 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Ccel_1442 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Ccel_1443 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Ccel_2081 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Ccel_1411 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cce03060] D Ccel_0778 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Ccel_0306 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Ccel_2253 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Ccel_0536 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Ccel_0537 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Ccel_0531 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Ccel_3488 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Ccel_2271 SecA DEAD domain protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Ccel_1457 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Ccel_0709 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Ccel_R0006 ffs; SRP RNA; RNA component of signal recognitionparti cle K01983 ffs; SRP RNA D Ccel_0697 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Ccel_2462 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Ccel_0715 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Ccel_0609 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cce04122] D Ccel_1932 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Ccel_1684 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Ccel_1930 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Ccel_1604 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Ccel_1603 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Ccel_1601 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Ccel_1683 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:cce03018] D Ccel_2254 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Ccel_1707 3' exoribonuclease K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Ccel_2247 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Ccel_2488 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Ccel_0304 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Ccel_3376 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Ccel_0605 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Ccel_1772 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Ccel_2612 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Ccel_1798 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Ccel_0392 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Ccel_1694 RNA chaperone Hfq K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:cce03030] D Ccel_1459 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Ccel_0452 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Ccel_0242 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Ccel_0159 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Ccel_1954 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Ccel_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Ccel_0082 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Ccel_0540 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Ccel_0056 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_3087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_1754 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Ccel_0717 ribonuclease HII/HIII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Ccel_2075 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Ccel_1976 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cce03410] D Ccel_3329 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Ccel_1887 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Ccel_1094 methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Ccel_2870 Uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D Ccel_2416 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Ccel_2415 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Ccel_3230 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Ccel_3322 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Ccel_1925 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Ccel_2075 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Ccel_1953 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Ccel_1976 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cce03420] D Ccel_3090 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Ccel_2119 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Ccel_3265 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Ccel_2342 ABC transporter related K03701 uvrA; excinuclease ABC subunit A D Ccel_1413 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Ccel_0807 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Ccel_0661 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_0373 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_1050 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_3423 superfamily I DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_2075 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Ccel_1976 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Ccel_0660 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:cce03430] D Ccel_1697 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Ccel_1470 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Ccel_1433 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Ccel_1696 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Ccel_0661 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_0373 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_1050 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_3423 superfamily I DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_1904 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Ccel_1903 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Ccel_1953 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Ccel_0056 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_3087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_1459 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Ccel_0452 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Ccel_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Ccel_0242 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Ccel_1954 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Ccel_0159 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Ccel_1976 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Ccel_0834 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Ccel_2787 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:cce03440] D Ccel_1953 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Ccel_0056 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_3087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Ccel_0581 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Ccel_0244 recombination protein RecR K06187 recR; recombination protein RecR D Ccel_0676 recA protein K03553 recA; recombination protein RecA D Ccel_2075 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Ccel_1347 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Ccel_1348 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Ccel_1346 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Ccel_1882 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Ccel_0089 exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Ccel_1459 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Ccel_0452 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Ccel_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Ccel_0242 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Ccel_1954 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Ccel_0159 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Ccel_1527 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:cce03450] D Ccel_0364 Ku protein K10979 ku; DNA end-binding protein Ku D Ccel_0366 DNA polymerase LigD, polymerase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Ccel_0365 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cce02010] D Ccel_1600 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Ccel_1599 NifC-like ABC-type porter K02018 modB; molybdate transport system permease protein D Ccel_0892 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Ccel_0891 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Ccel_0890 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Ccel_0889 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Ccel_3333 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Ccel_3334 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Ccel_2909 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Ccel_1133 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_0200 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_1136 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_2115 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_1025 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_0998 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_0996 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_3350 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_2997 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_0201 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Ccel_1134 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Ccel_2996 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Ccel_1026 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Ccel_1027 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Ccel_0202 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Ccel_1135 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Ccel_1000 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Ccel_2995 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Ccel_0145 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_0948 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_1252 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_0150 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_2458 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_1016 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_0143 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_0946 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_1014 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_1253 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_0151 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_2456 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_0144 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_0947 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_1254 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_0152 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_2457 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_1015 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_2112 extracellular solute-binding protein family 1 K10240 cebE; cellobiose transport system substrate-binding protein D Ccel_2111 binding-protein-dependent transport systems inner membrane component K10241 cebF; cellobiose transport system permease protein D Ccel_2110 binding-protein-dependent transport systems inner membrane component K10242 cebG; cellobiose transport system permease protein D Ccel_1987 putative solute-binding component of ABC transporter K10546 chvE; putative multiple sugar transport system substrate-binding protein D Ccel_2687 putative solute-binding component of ABC transporter K10546 chvE; putative multiple sugar transport system substrate-binding protein D Ccel_2684 inner-membrane translocator K10547 gguB; putative multiple sugar transport system permease protein D Ccel_1985 inner-membrane translocator K10547 gguB; putative multiple sugar transport system permease protein D Ccel_2686 ABC transporter related K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Ccel_1986 ABC transporter related K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Ccel_1075 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Ccel_1406 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Ccel_1077 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Ccel_1408 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Ccel_1409 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Ccel_1078 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Ccel_1407 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Ccel_1076 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Ccel_1984 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Ccel_2689 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Ccel_1223 periplasmic binding protein/LacI transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein D Ccel_1226 inner-membrane translocator K23509 ytfT; galactofuranose transport system permease protein D Ccel_1225 inner-membrane translocator K23509 ytfT; galactofuranose transport system permease protein D Ccel_1224 ABC transporter related K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D Ccel_0054 periplasmic sugar-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D Ccel_1642 periplasmic binding protein/LacI transcriptional regulator K17213 K17213; inositol transport system substrate-binding protein D Ccel_1643 inner-membrane translocator K17214 K17214; inositol transport system permease protein D Ccel_1644 ABC transporter related K17215 K17215; inositol transport system ATP-binding protein D Ccel_2101 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Ccel_2103 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Ccel_2102 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Ccel_2104 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Ccel_2589 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D Ccel_2588 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Ccel_2587 ABC transporter related K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Ccel_0044 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Ccel_0048 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Ccel_0047 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Ccel_0046 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Ccel_0045 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Ccel_1156 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Ccel_3413 ABC-3 protein K09816 znuB; zinc transport system permease protein D Ccel_3414 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Ccel_1267 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein D Ccel_1182 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Ccel_1266 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Ccel_1183 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Ccel_1268 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Ccel_1184 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Ccel_1269 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Ccel_3231 BioY protein K03523 bioY; biotin transport system substrate-specific component D Ccel_0792 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Ccel_0789 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Ccel_0791 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Ccel_1160 hypothetical protein K19310 bcrB; bacitracin transport system permease protein D Ccel_1159 hypothetical protein K19310 bcrB; bacitracin transport system permease protein D Ccel_1161 ABC transporter related K19309 bcrA; bacitracin transport system ATP-binding protein D Ccel_2906 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Ccel_2907 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Ccel_2606 conserved hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein D Ccel_2605 ABC transporter related K16921 ytrB; acetoin utilization transport system ATP-binding protein D Ccel_1429 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_1430 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_1191 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_0583 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_1385 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_0584 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_1386 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_1192 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_2265 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Ccel_3229 ABC transporter related K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:cce02060] D Ccel_0806 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr D Ccel_2245 HPrNtr domain-containing protein K02784 ptsH; phosphocarrier protein HPr C 03070 Bacterial secretion system [PATH:cce03070] D Ccel_0536 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Ccel_0537 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Ccel_0306 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Ccel_2253 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Ccel_0778 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Ccel_0531 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Ccel_3488 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Ccel_2271 SecA DEAD domain protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Ccel_1457 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Ccel_0697 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Ccel_0709 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Ccel_2738 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D Ccel_3153 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:cce02020] D Ccel_2107 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Ccel_2106 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Ccel_0930 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Ccel_2101 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Ccel_2990 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1719 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1890 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1938 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_0100 flagellin domain protein K02406 fliC; flagellin D Ccel_0102 flagellin domain protein K02406 fliC; flagellin D Ccel_0101 flagellin domain protein K02406 fliC; flagellin D Ccel_2022 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Ccel_0264 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Ccel_0246 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD D Ccel_3393 PAS/PAC sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Ccel_3394 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Ccel_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Ccel_2658 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Ccel_2145 histidine kinase K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3] D Ccel_1894 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Ccel_2425 response regulator receiver protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Ccel_0138 malic protein NAD-binding K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Ccel_2798 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_0955 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_2127 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_3455 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_0099 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Ccel_1864 Sensor DegS domain protein K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Ccel_1863 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU D Ccel_2778 SAF domain protein K02279 cpaB; pilus assembly protein CpaB D Ccel_2776 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Ccel_0503 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Ccel_0114 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Ccel_0504 Flp pilus assembly protein TadB-like protein K12510 tadB; tight adherence protein B D Ccel_0505 hypothetical protein K12511 tadC; tight adherence protein C D Ccel_0561 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Ccel_2411 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Ccel_1070 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Ccel_1071 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Ccel_1727 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Ccel_2179 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0219 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0221 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0287 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0493 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0496 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2237 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2313 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2636 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2886 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2888 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_3226 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_3234 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_1383 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0049 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2314 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_0588 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_2099 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_2026 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_2315 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Ccel_2027 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Ccel_2037 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_2316 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_1794 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_2310 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Ccel_2028 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Ccel_1227 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0199 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1137 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1983 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_2114 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0148 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_2453 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1646 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_3248 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1250 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0945 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0994 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_2452 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_2113 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_0147 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_0198 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_0995 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_1228 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_3249 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_1138 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_1645 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_1982 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_1251 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_0149 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_0944 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_2929 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D Ccel_1246 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D Ccel_1099 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0428 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0840 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_2226 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0755 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_2621 glycoside hydrolase family 9 domain protein Ig domain protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0732 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0731 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0740 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0231 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_2337 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_2392 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_1648 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0734 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0735 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0737 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_1249 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Ccel_0753 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cce02024] D Ccel_1694 RNA chaperone Hfq K03666 hfq; host factor-I protein D Ccel_3213 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Ccel_3214 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Ccel_0981 Pyridoxal-dependent decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Ccel_2243 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2] D Ccel_1491 type 3a cellulose-binding domain protein K20276 bapA; large repetitive protein D Ccel_0896 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_1369 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_2472 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_3252 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_1626 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_0379 protein of unknown function DUF291 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Ccel_0752 glycoside hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Ccel_0429 PKD domain containing protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Ccel_1551 glycoside hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Ccel_2006 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Ccel_2798 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_0955 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_2127 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_3455 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_0044 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Ccel_0048 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Ccel_0047 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Ccel_0046 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Ccel_0045 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Ccel_2265 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Ccel_2264 hypothetical protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter D Ccel_0608 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Ccel_1768 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Ccel_1767 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Ccel_1766 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Ccel_1765 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Ccel_1764 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Ccel_3488 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Ccel_0306 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Ccel_2253 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Ccel_0778 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Ccel_0531 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Ccel_2271 SecA DEAD domain protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Ccel_1457 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Ccel_0697 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Ccel_0709 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Ccel_1863 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU D Ccel_1894 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Ccel_2425 response regulator receiver protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:cce02030] D Ccel_2179 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0219 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0221 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0287 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0493 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0496 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2237 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2313 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2636 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2886 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2888 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_3226 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_3234 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_1383 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0049 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_1984 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Ccel_2315 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Ccel_2027 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Ccel_2314 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_0588 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_2099 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_2026 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_2037 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_2316 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_1794 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_2025 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Ccel_2279 CheC domain protein K03409 cheX; chemotaxis protein CheX D Ccel_2310 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Ccel_2028 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Ccel_2024 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Ccel_1727 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Ccel_2050 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Ccel_2039 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Ccel_2038 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Ccel_0264 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Ccel_0263 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:cce02040] D Ccel_2052 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Ccel_2051 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Ccel_2050 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Ccel_2049 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Ccel_2048 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Ccel_2047 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Ccel_2045 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Ccel_2039 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Ccel_2038 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Ccel_2036 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Ccel_2035 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Ccel_2034 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Ccel_2033 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Ccel_2031 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Ccel_2032 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Ccel_2054 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Ccel_2053 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Ccel_2044 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Ccel_2042 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE D Ccel_3101 protein of unknown function DUF1078 domain protein K02391 flgF; flagellar basal-body rod protein FlgF D Ccel_3100 protein of unknown function DUF1078 domain protein K02392 flgG; flagellar basal-body rod protein FlgG D Ccel_3099 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Ccel_0094 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Ccel_0095 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Ccel_0096 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Ccel_0100 flagellin domain protein K02406 fliC; flagellin D Ccel_0102 flagellin domain protein K02406 fliC; flagellin D Ccel_0101 flagellin domain protein K02406 fliC; flagellin D Ccel_0105 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2 D Ccel_0106 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Ccel_0264 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Ccel_0263 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Ccel_0541 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Ccel_2022 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Ccel_2254 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cce01501] D Ccel_0044 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Ccel_0048 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Ccel_0047 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Ccel_0046 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Ccel_0045 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Ccel_1301 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Ccel_0725 Beta-lactamase class A-like protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Ccel_2876 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Ccel_2560 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Ccel_1486 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cce01502] D Ccel_2658 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Ccel_0283 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Ccel_2926 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Ccel_0480 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Ccel_0481 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Ccel_0483 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cce01503] D Ccel_0743 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_2890 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_3223 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_1350 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_2941 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_2990 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1719 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1890 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1938 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cce01000] C 01001 Protein kinases [BR:cce01001] D Ccel_1535 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Ccel_0111 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Ccel_0399 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Ccel_0401 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Ccel_2107 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Ccel_3393 PAS/PAC sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Ccel_1864 Sensor DegS domain protein K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Ccel_2145 histidine kinase K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3] D Ccel_2315 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Ccel_2027 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Ccel_1227 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0199 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1137 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1983 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_2114 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0148 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_2453 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1646 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_3248 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1250 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0945 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0994 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cce01009] D Ccel_2168 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Ccel_2612 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Ccel_0492 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Ccel_1534 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Ccel_1338 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cce01002] D Ccel_0609 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Ccel_2410 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Ccel_2779 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Ccel_0512 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Ccel_1978 spore protease K06012 gpr; spore protease [EC:3.4.24.78] D Ccel_1072 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Ccel_2063 sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D Ccel_2202 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Ccel_3356 peptidase C26 K07010 K07010; putative glutamine amidotransferase D Ccel_2265 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Ccel_2749 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Ccel_2188 Peptidoglycan-binding domain 1 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Ccel_0033 NLP/P60 protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13] D Ccel_2184 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Ccel_1205 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Ccel_2798 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_0955 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_2127 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_3455 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Ccel_1776 Abortive infection protein K07052 K07052; CAAX protease family protein D Ccel_0915 Abortive infection protein K07052 K07052; CAAX protease family protein D Ccel_0040 Abortive infection protein K07052 K07052; CAAX protease family protein D Ccel_3460 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Ccel_3421 peptidase M14 carboxypeptidase A K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11] D Ccel_2447 peptidase M16 domain protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D Ccel_0721 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Ccel_2277 peptidase T-like protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Ccel_0884 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D Ccel_3126 Peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D Ccel_0780 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Ccel_3362 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Ccel_0565 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Ccel_1923 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Ccel_3459 putative aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D Ccel_2586 isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D Ccel_0085 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Ccel_2547 peptidase M50 K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D Ccel_0450 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Ccel_0633 conserved hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D Ccel_2990 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1719 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1890 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1938 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_2643 peptidase S8 and S53 subtilisin kexin sedolisin K13277 epr; minor extracellular protease Epr [EC:3.4.21.-] D Ccel_3196 peptidase S8 and S53 subtilisin kexin sedolisin K17734 aprX; serine protease AprX [EC:3.4.21.-] D Ccel_1749 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_1370 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_0487 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_0520 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_0810 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Ccel_2835 peptidase S14 ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Ccel_2568 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Ccel_0812 Sigma 54 interacting domain protein K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D Ccel_1693 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Ccel_3317 transcriptional regulator, XRE family K01356 lexA; repressor LexA [EC:3.4.21.88] D Ccel_2462 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Ccel_0715 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Ccel_2904 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Ccel_0290 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Ccel_0131 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D Ccel_1860 Rhomboid family protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D Ccel_1895 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D Ccel_2958 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease D Ccel_0176 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Ccel_1474 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:cce01003] D Ccel_2417 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D Ccel_0034 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Ccel_1888 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Ccel_1334 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Ccel_2876 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Ccel_2921 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Ccel_0262 UDP-N-acetylglucosamine 2-epimerase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Ccel_2577 putative carbohydrate binding K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] D Ccel_1988 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cce01005] D Ccel_1307 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Ccel_0262 UDP-N-acetylglucosamine 2-epimerase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cce01011] D Ccel_3389 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Ccel_0280 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Ccel_2291 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Ccel_3096 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Ccel_1726 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Ccel_0479 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Ccel_0283 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Ccel_2926 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Ccel_3402 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Ccel_0481 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Ccel_0483 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Ccel_1147 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Ccel_1555 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Ccel_3348 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Ccel_0675 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Ccel_2876 glycosyl transferase family 51 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Ccel_2560 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Ccel_1486 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Ccel_0478 penicillin-binding protein transpeptidase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Ccel_2476 penicillin-binding protein transpeptidase K05364 pbpA; penicillin-binding protein A D Ccel_1749 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_1370 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_0487 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_0520 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Ccel_3126 Peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D Ccel_2749 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Ccel_2188 Peptidoglycan-binding domain 1 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Ccel_0884 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D Ccel_2073 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Ccel_1472 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Ccel_0035 spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Ccel_0527 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Ccel_0281 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Ccel_0743 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_2890 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_3223 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_1350 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_2941 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cce01004] D Ccel_0683 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_0975 Acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_2328 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_2380 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Ccel_0682 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Ccel_1215 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Ccel_2885 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Ccel_2887 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Ccel_0686 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0866 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0867 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0868 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Ccel_0684 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_2089 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_0872 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_0911 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Ccel_3097 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Ccel_2273 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Ccel_2331 amino acid adenylation domain protein K13611 pksJ; bacillaene biosynthesis, polyketide synthase / nonribosomal peptide synthetase PksJ/BaeJ D Ccel_0494 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_1469 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Ccel_0896 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_1369 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_2472 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_3252 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_1626 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_1862 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Ccel_2516 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Ccel_0681 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Ccel_2130 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Ccel_1316 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:cce01008] D Ccel_0854 PfaD family protein K15329 pksE; trans-AT polyketide synthase, acyltransferase and oxidoreductase domains D Ccel_0852 Acyl transferase K15328 pksD; bacillaene synthase trans-acting acyltransferase D Ccel_2331 amino acid adenylation domain protein K13611 pksJ; bacillaene biosynthesis, polyketide synthase / nonribosomal peptide synthetase PksJ/BaeJ D Ccel_2344 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] C 01006 Prenyltransferases [BR:cce01006] D Ccel_1902 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Ccel_0447 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Ccel_1695 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Ccel_1113 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:cce01007] D Ccel_2139 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Ccel_2081 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Ccel_1411 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Ccel_3324 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Ccel_0285 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Ccel_1098 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Ccel_0205 tRNA synthetase class I (M) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Ccel_1855 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Ccel_1199 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Ccel_3454 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Ccel_0396 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Ccel_1946 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Ccel_2574 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Ccel_1947 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Ccel_1789 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Ccel_3183 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Ccel_0345 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Ccel_1372 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Ccel_1373 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Ccel_2096 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Ccel_1442 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Ccel_1443 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Ccel_1965 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Ccel_2208 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-] D Ccel_0383 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Ccel_1042 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Ccel_3185 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Ccel_1612 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Ccel_2912 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Ccel_1280 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Ccel_1877 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Ccel_1802 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cce00194] D Ccel_0273 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Ccel_0272 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Ccel_0271 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Ccel_0270 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Ccel_0269 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Ccel_0268 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Ccel_0267 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Ccel_0266 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cce03000] D Ccel_2549 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2867 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2841 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_1012 transcriptional regulator, AraC family K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D Ccel_1003 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D Ccel_2654 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator D Ccel_2678 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Ccel_3264 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Ccel_0841 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Ccel_0630 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Ccel_1005 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Ccel_2999 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Ccel_3000 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Ccel_1438 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Ccel_3470 regulatory protein GntR HTH K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D Ccel_1074 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Ccel_1263 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Ccel_2604 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator D Ccel_2161 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Ccel_1059 transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D Ccel_1963 transcriptional regulator, AsnC family K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon D Ccel_1995 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Ccel_3007 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Ccel_1678 transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Ccel_1360 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Ccel_1933 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Ccel_1065 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Ccel_0236 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Ccel_0216 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Ccel_2935 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Ccel_1103 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Ccel_0797 iron dependent repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Ccel_1301 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Ccel_0134 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Ccel_2535 transcriptional regulator, TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D Ccel_3095 purine operon repressor, PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor D Ccel_2908 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator D Ccel_2882 Rex DNA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Ccel_3417 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Ccel_2865 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Ccel_2925 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Ccel_0164 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Ccel_3312 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Ccel_3070 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Ccel_3130 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Ccel_3088 transcriptional regulator, AbrB family K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D Ccel_0008 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ccel_3483 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ccel_3163 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ccel_3306 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ccel_0340 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Ccel_3009 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Ccel_1897 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Ccel_3430 ROK family protein K02565 nagC; N-acetylglucosamine repressor D Ccel_1800 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Ccel_0324 transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D Ccel_1034 transcriptional regulator, DeoR family K05346 deoR; deoxyribonucleoside regulator D Ccel_1460 tryptophan RNA-binding attenuator protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D Ccel_0611 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Ccel_2059 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Ccel_0475 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cce03021] D Ccel_0660 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Ccel_0787 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Ccel_0312 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Ccel_0313 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Ccel_1790 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Ccel_0541 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Ccel_0228 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Ccel_2173 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Ccel_2077 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Ccel_0803 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Ccel_0400 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily K03090 sigB; RNA polymerase sigma-B factor D Ccel_2061 RNA polymerase, sigma 28 subunit, SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Ccel_2062 RNA polymerase, sigma 28 subunit, SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Ccel_2284 RNA polymerase, sigma 28 subunit, SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Ccel_1841 RNA polymerase, sigma-24 subunit, ECF subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Ccel_3319 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor D Ccel_1739 RNA polymerase, sigma 28 subunit, SigI K03093 sigI; RNA polymerase sigma-I factor D Ccel_2022 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Ccel_0454 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Ccel_1905 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Ccel_0204 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Ccel_0307 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Ccel_0849 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Ccel_3361 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Ccel_0398 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D Ccel_0399 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Ccel_0401 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Ccel_0395 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Ccel_3376 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cce03019] D Ccel_1319 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Ccel_0687 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Ccel_1772 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Ccel_0605 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Ccel_2247 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Ccel_2488 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Ccel_0304 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Ccel_0124 DEAD/DEAH box helicase domain protein K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D Ccel_2254 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Ccel_1707 3' exoribonuclease K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Ccel_3376 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Ccel_2612 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Ccel_1798 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Ccel_0392 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Ccel_1694 RNA chaperone Hfq K03666 hfq; host factor-I protein D Ccel_0099 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Ccel_2290 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:cce03011] D Ccel_1728 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Ccel_0442 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Ccel_0764 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Ccel_0786 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Ccel_0775 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Ccel_0055 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Ccel_0316 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Ccel_0772 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Ccel_0795 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Ccel_0757 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Ccel_0785 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Ccel_0315 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Ccel_0784 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Ccel_0771 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Ccel_1708 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Ccel_0710 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Ccel_0767 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Ccel_0057 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Ccel_0075 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Ccel_0762 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Ccel_1979 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Ccel_2094 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Ccel_0309 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Ccel_0761 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Ccel_0758 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Ccel_0759 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Ccel_0770 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Ccel_0773 ribosomal protein L6 signature 1 K02933 RP-L6; large subunit ribosomal protein L6 D Ccel_0081 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Ccel_0310 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Ccel_0308 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Ccel_0311 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Ccel_0794 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Ccel_0768 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Ccel_0777 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Ccel_0765 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Ccel_0788 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Ccel_0774 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Ccel_0714 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Ccel_1313 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Ccel_1320 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Ccel_0763 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Ccel_0760 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Ccel_0769 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Ccel_1322 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Ccel_1883 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Ccel_0766 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Ccel_0776 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Ccel_3375 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Ccel_2134 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Ccel_0305 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Ccel_3491 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Ccel_1312 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Ccel_0783 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Ccel_0314 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A D Ccel_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0039 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0081 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0021 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0086 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0059 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0088 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0084 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0036 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0082 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0087 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cce03009] D Ccel_0687 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Ccel_0579 GTP-binding protein Era K03595 era; GTPase D Ccel_1323 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Ccel_0454 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Ccel_1905 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Ccel_0204 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Ccel_0307 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Ccel_0849 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Ccel_2171 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Ccel_0171 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Ccel_1532 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Ccel_0188 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Ccel_0790 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Ccel_1881 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Ccel_1795 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Ccel_3484 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Ccel_0476 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Ccel_0163 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Ccel_1899 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Ccel_2615 Methyltransferase type 11 K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Ccel_3320 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Ccel_3387 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Ccel_2432 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Ccel_1533 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Ccel_2868 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Ccel_1743 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Ccel_0347 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Ccel_0610 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Ccel_0593 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Ccel_2431 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Ccel_0801 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Ccel_0712 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Ccel_0678 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Ccel_1796 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Ccel_1319 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Ccel_2239 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Ccel_3321 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D Ccel_2488 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Ccel_0304 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Ccel_0124 DEAD/DEAH box helicase domain protein K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D Ccel_1536 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Ccel_2131 small GTP-binding protein K03977 engA; GTPase D Ccel_0716 GTP1/OBG protein K14540 rbgA; ribosome biogenesis GTPase A D Ccel_0178 GTP-binding proten HflX K03665 hflX; GTPase D Ccel_0257 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Ccel_1951 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Ccel_0458 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Ccel_0453 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Ccel_0003 RNA-binding S4 domain protein K14761 rlbA; ribosome-associated protein D Ccel_1366 iojap-like protein K09710 ybeB; ribosome-associated protein D Ccel_0576 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Ccel_1324 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Ccel_0370 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Ccel_0590 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Ccel_2135 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cce03016] D Ccel_2295 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Ccel_2139 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Ccel_0345 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Ccel_1855 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Ccel_3454 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Ccel_1098 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Ccel_0205 tRNA synthetase class I (M) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Ccel_0285 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Ccel_0396 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Ccel_1946 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Ccel_2096 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Ccel_2574 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Ccel_1789 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Ccel_1372 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Ccel_1373 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Ccel_3183 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Ccel_3324 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Ccel_1199 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Ccel_1947 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Ccel_1442 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Ccel_1443 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Ccel_2081 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Ccel_1411 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Ccel_1950 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Ccel_2095 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Ccel_1148 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Ccel_0793 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Ccel_0460 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Ccel_1932 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Ccel_1684 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Ccel_0257 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Ccel_1695 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Ccel_3486 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Ccel_3485 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Ccel_3490 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Ccel_1352 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Ccel_1939 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Ccel_0622 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Ccel_3440 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Ccel_2942 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Ccel_1699 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Ccel_2241 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Ccel_2055 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Ccel_0713 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Ccel_0543 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D Ccel_2278 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Ccel_0162 Methyltransferase type 11 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D Ccel_1437 RNA methyltransferase, TrmH family, group 3 K03437 spoU; RNA methyltransferase, TrmH family D Ccel_1930 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Ccel_3405 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Ccel_0529 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Ccel_1327 4Fe-4S ferredoxin iron-sulfur binding domain protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Ccel_1349 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Ccel_0530 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Ccel_1683 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Ccel_0083 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Ccel_0800 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Ccel_0814 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Ccel_0799 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Ccel_0550 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Ccel_1771 protein of unknown function DUF795 K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D Ccel_2247 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Ccel_1707 3' exoribonuclease K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cce03012] D Ccel_0457 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Ccel_1311 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Ccel_2619 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Ccel_2666 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Ccel_2884 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Ccel_0443 translation elongation factor Ts K02357 tsf; elongation factor Ts D Ccel_0318 translation elongation factor Tu K02358 tuf; elongation factor Tu D Ccel_2879 translation elongation factor G K02355 fusA; elongation factor G D Ccel_0317 translation elongation factor G K02355 fusA; elongation factor G D Ccel_0255 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Ccel_0445 ribosome recycling factor K02838 frr; ribosome recycling factor D Ccel_3373 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Ccel_3091 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Ccel_0782 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Ccel_1922 translation elongation factor P K02356 efp; elongation factor P D Ccel_2206 hypothetical protein K02836 prfB; peptide chain release factor 2 D Ccel_1434 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:cce03110] D Ccel_0327 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Ccel_2116 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Ccel_0811 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Ccel_0492 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Ccel_1798 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Ccel_0392 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Ccel_1797 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Ccel_1465 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D Ccel_2900 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Ccel_1799 GrpE protein K03687 GRPE; molecular chaperone GrpE D Ccel_2938 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Ccel_0391 chaperonin Cpn10 K04078 groES; chaperonin GroES D Ccel_2990 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1719 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1890 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_1938 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Ccel_0085 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Ccel_0266 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Ccel_3365 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Ccel_3363 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Ccel_2643 peptidase S8 and S53 subtilisin kexin sedolisin K13277 epr; minor extracellular protease Epr [EC:3.4.21.-] D Ccel_1402 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Ccel_3079 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Ccel_0751 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D Ccel_3089 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D Ccel_2211 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:cce04131] D Ccel_1382 band 7 protein K07192 FLOT; flotillin D Ccel_3221 hexokinase K00844 HK; hexokinase [EC:2.7.1.1] D Ccel_2275 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Ccel_2569 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Ccel_0492 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:cce04121] C 03051 Proteasome [BR:cce03051] D Ccel_0492 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:cce03032] D Ccel_1754 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Ccel_2549 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2867 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2841 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_3085 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Ccel_2424 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Ccel_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Ccel_0082 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Ccel_0041 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC D Ccel_0540 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Ccel_0056 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_3087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_1459 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Ccel_0452 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Ccel_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Ccel_1954 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Ccel_0159 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Ccel_0242 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Ccel_0717 ribonuclease HII/HIII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Ccel_2075 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Ccel_1976 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Ccel_0834 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Ccel_2787 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Ccel_3482 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Ccel_1399 DNA gyrase/topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Ccel_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Ccel_1398 DNA gyrase subunit B domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Ccel_2056 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Ccel_0922 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cce03036] D Ccel_2549 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2867 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2841 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_0687 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Ccel_1382 band 7 protein K07192 FLOT; flotillin D Ccel_3085 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Ccel_2424 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Ccel_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Ccel_1694 RNA chaperone Hfq K03666 hfq; host factor-I protein D Ccel_0696 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Ccel_1747 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Ccel_1746 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Ccel_2065 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Ccel_2907 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Ccel_0601 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Ccel_0477 cell division protein FtsL K03586 ftsL; cell division protein FtsL D Ccel_2067 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Ccel_0482 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Ccel_2906 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Ccel_2064 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Ccel_0174 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Ccel_0743 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_2890 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_3223 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_1350 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_2941 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_2559 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Ccel_2558 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Ccel_2557 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Ccel_0600 DivIVA family protein K04074 divIVA; cell division initiation protein D Ccel_3443 DivIVA family protein K04074 divIVA; cell division initiation protein D Ccel_0597 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF D Ccel_2563 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Ccel_3102 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Ccel_2562 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Ccel_2561 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Ccel_0474 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Ccel_0007 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Ccel_3164 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Ccel_0008 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ccel_3483 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ccel_3163 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ccel_3306 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ccel_3485 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Ccel_3484 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Ccel_2055 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Ccel_1751 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Ccel_2981 integrase family protein K04763 xerD; integrase/recombinase XerD D Ccel_1654 integrase family protein K04763 xerD; integrase/recombinase XerD D Ccel_0067 integrase family protein K04763 xerD; integrase/recombinase XerD D Ccel_2696 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Ccel_0898 GTP-binding protein HSR1-related K03978 engB; GTP-binding protein D Ccel_2287 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:cce03400] D Ccel_1140 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Ccel_3329 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Ccel_1887 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Ccel_0660 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Ccel_0230 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Ccel_0177 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Ccel_2870 Uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D Ccel_2416 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Ccel_2415 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Ccel_3230 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Ccel_1094 methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Ccel_3322 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Ccel_1925 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Ccel_1953 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Ccel_1976 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Ccel_2075 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Ccel_2119 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Ccel_3265 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Ccel_2342 ABC transporter related K03701 uvrA; excinuclease ABC subunit A D Ccel_1413 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Ccel_0807 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Ccel_0661 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_0373 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_1050 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_3423 superfamily I DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Ccel_0312 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Ccel_0313 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Ccel_0787 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Ccel_1790 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Ccel_3090 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Ccel_1697 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Ccel_1470 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Ccel_1433 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Ccel_1696 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Ccel_1904 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Ccel_1903 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Ccel_1459 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Ccel_0452 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Ccel_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Ccel_1954 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Ccel_0159 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Ccel_0242 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Ccel_0056 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_3087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_0834 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Ccel_2787 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Ccel_0089 exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Ccel_0676 recA protein K03553 recA; recombination protein RecA D Ccel_1347 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Ccel_1348 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Ccel_1346 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Ccel_1527 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Ccel_0052 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Ccel_2709 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Ccel_0065 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Ccel_0051 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D Ccel_0031 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11 D Ccel_0336 AAA ATPase K04485 radA; DNA repair protein RadA/Sms D Ccel_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Ccel_1882 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Ccel_0581 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Ccel_0244 recombination protein RecR K06187 recR; recombination protein RecR D Ccel_1896 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Ccel_1774 recombination helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Ccel_1775 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Ccel_1482 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Ccel_3119 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Ccel_0364 Ku protein K10979 ku; DNA end-binding protein Ku D Ccel_0366 DNA polymerase LigD, polymerase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Ccel_0365 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Ccel_3482 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Ccel_1399 DNA gyrase/topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Ccel_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Ccel_1398 DNA gyrase subunit B domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Ccel_2056 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Ccel_3085 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Ccel_2424 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Ccel_2007 UMUC domain protein DNA-repair protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Ccel_1314 UMUC domain protein DNA-repair protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Ccel_1693 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Ccel_3317 transcriptional regulator, XRE family K01356 lexA; repressor LexA [EC:3.4.21.88] D Ccel_0677 regulatory protein RecX K03565 recX; regulatory protein D Ccel_0964 DEAD/DEAH box helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Ccel_2401 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Ccel_0459 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:cce03029] D Ccel_0457 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Ccel_1311 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Ccel_2619 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Ccel_2666 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Ccel_0443 translation elongation factor Ts K02357 tsf; elongation factor Ts D Ccel_0318 translation elongation factor Tu K02358 tuf; elongation factor Tu D Ccel_2879 translation elongation factor G K02355 fusA; elongation factor G D Ccel_0317 translation elongation factor G K02355 fusA; elongation factor G D Ccel_0579 GTP-binding protein Era K03595 era; GTPase D Ccel_2081 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Ccel_3454 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Ccel_1946 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Ccel_1789 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Ccel_0285 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Ccel_2436 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Ccel_2437 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Ccel_2435 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Ccel_0056 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_3087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Ccel_1798 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Ccel_1799 GrpE protein K03687 GRPE; molecular chaperone GrpE D Ccel_0392 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Ccel_0391 chaperonin Cpn10 K04078 groES; chaperonin GroES D Ccel_1797 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Ccel_1465 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D Ccel_1932 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Ccel_1684 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Ccel_3488 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Ccel_0492 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cce02000] D Ccel_1429 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_1430 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_1191 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_0583 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_1385 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_0584 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_1386 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_1192 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Ccel_1769 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Ccel_3351 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Ccel_1770 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Ccel_1248 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Ccel_0343 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Ccel_2265 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Ccel_3229 ABC transporter related K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D Ccel_0123 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein D Ccel_1600 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Ccel_1599 NifC-like ABC-type porter K02018 modB; molybdate transport system permease protein D Ccel_0892 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Ccel_0891 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Ccel_0890 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Ccel_0889 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Ccel_3333 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Ccel_3334 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Ccel_0878 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Ccel_0437 extracellular solute-binding protein family 3 K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Ccel_0436 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Ccel_0879 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Ccel_0880 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Ccel_0435 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Ccel_2909 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Ccel_1133 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_0200 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_1136 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_2115 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_1025 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_0998 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_0996 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_3350 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_2997 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Ccel_0201 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Ccel_1134 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Ccel_2996 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Ccel_1026 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Ccel_1027 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Ccel_0202 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Ccel_1135 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Ccel_1000 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Ccel_2995 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Ccel_2112 extracellular solute-binding protein family 1 K10240 cebE; cellobiose transport system substrate-binding protein D Ccel_2111 binding-protein-dependent transport systems inner membrane component K10241 cebF; cellobiose transport system permease protein D Ccel_2110 binding-protein-dependent transport systems inner membrane component K10242 cebG; cellobiose transport system permease protein D Ccel_0145 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_0948 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_1252 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_0150 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_2458 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_1016 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Ccel_0143 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_0946 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_1014 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_1253 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_0151 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_2456 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Ccel_0144 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_0947 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_1254 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_0152 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_2457 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_1015 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Ccel_0054 periplasmic sugar-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D Ccel_3246 extracellular solute-binding protein family 1 K25067 fcsSBP; fucose transport system substrate-binding protein D Ccel_3245 binding-protein-dependent transport systems inner membrane component K25068 K25068; fucose transport system permease protein D Ccel_3244 binding-protein-dependent transport systems inner membrane component K25069 K25069; fucose transport system permease protein D Ccel_1987 putative solute-binding component of ABC transporter K10546 chvE; putative multiple sugar transport system substrate-binding protein D Ccel_2687 putative solute-binding component of ABC transporter K10546 chvE; putative multiple sugar transport system substrate-binding protein D Ccel_2684 inner-membrane translocator K10547 gguB; putative multiple sugar transport system permease protein D Ccel_1985 inner-membrane translocator K10547 gguB; putative multiple sugar transport system permease protein D Ccel_2686 ABC transporter related K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Ccel_1986 ABC transporter related K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Ccel_1984 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Ccel_2689 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Ccel_1223 periplasmic binding protein/LacI transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein D Ccel_1226 inner-membrane translocator K23509 ytfT; galactofuranose transport system permease protein D Ccel_1225 inner-membrane translocator K23509 ytfT; galactofuranose transport system permease protein D Ccel_1224 ABC transporter related K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D Ccel_1642 periplasmic binding protein/LacI transcriptional regulator K17213 K17213; inositol transport system substrate-binding protein D Ccel_1643 inner-membrane translocator K17214 K17214; inositol transport system permease protein D Ccel_1644 ABC transporter related K17215 K17215; inositol transport system ATP-binding protein D Ccel_1075 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Ccel_1406 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Ccel_1077 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Ccel_1408 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Ccel_1409 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Ccel_1078 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Ccel_1407 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Ccel_1076 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Ccel_0999 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Ccel_2101 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Ccel_2103 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Ccel_2102 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Ccel_2104 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Ccel_2589 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D Ccel_2588 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Ccel_2587 ABC transporter related K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Ccel_0885 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Ccel_1635 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Ccel_0886 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Ccel_1632 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Ccel_1631 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Ccel_0887 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Ccel_0044 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Ccel_0048 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Ccel_0047 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Ccel_0046 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Ccel_0045 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Ccel_0608 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Ccel_1768 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Ccel_1767 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Ccel_1766 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Ccel_1765 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Ccel_1764 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Ccel_2663 periplasmic binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D Ccel_2661 transport system permease protein K25283 yclO; iron-siderophore transport system permease protein D Ccel_2662 transport system permease protein K25284 yclN; iron-siderophore transport system permease protein D Ccel_2660 ABC transporter related K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D Ccel_3204 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Ccel_3203 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Ccel_3202 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Ccel_1156 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Ccel_3413 ABC-3 protein K09816 znuB; zinc transport system permease protein D Ccel_3414 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Ccel_1267 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein D Ccel_1183 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Ccel_1268 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Ccel_1182 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Ccel_1266 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Ccel_1184 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Ccel_1269 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Ccel_3231 BioY protein K03523 bioY; biotin transport system substrate-specific component D Ccel_0792 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Ccel_0789 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Ccel_0791 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Ccel_0296 ABC-2 type transporter K25151 gldF; gliding motility-associated transport system permease protein D Ccel_0295 ABC transporter related K25152 gldA; gliding motility-associated transport system ATP-binding protein D Ccel_0297 conserved hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component D Ccel_1160 hypothetical protein K19310 bcrB; bacitracin transport system permease protein D Ccel_1159 hypothetical protein K19310 bcrB; bacitracin transport system permease protein D Ccel_1161 ABC transporter related K19309 bcrA; bacitracin transport system ATP-binding protein D Ccel_2158 putative ABC-2 type transport system permease protein K25147 berB; beta-exotoxin I transport system permease protein D Ccel_2157 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein D Ccel_2159 ABC transporter related K25148 berA; beta-exotoxin I transport system ATP-binding protein D Ccel_2606 conserved hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein D Ccel_2605 ABC transporter related K16921 ytrB; acetoin utilization transport system ATP-binding protein D Ccel_2906 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Ccel_2907 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Ccel_2348 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein D Ccel_2520 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein D Ccel_2349 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein D Ccel_2521 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein D Ccel_2522 ABC transporter related K25156 evrA; viologen exporter family transport system ATP-binding protein D Ccel_2350 ABC transporter related K25156 evrA; viologen exporter family transport system ATP-binding protein D Ccel_0196 putative ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Ccel_1178 ABC-type Na+ efflux pump permease component-like protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Ccel_0967 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Ccel_3261 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Ccel_0224 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Ccel_2322 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Ccel_1177 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Ccel_1918 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Ccel_2608 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Ccel_0223 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Ccel_0195 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Ccel_0966 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Ccel_3262 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Ccel_2323 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Ccel_1180 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Ccel_0558 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Ccel_2355 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Ccel_0469 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Ccel_1152 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Ccel_0856 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Ccel_0857 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Ccel_2356 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Ccel_0557 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Ccel_2703 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Ccel_0466 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Ccel_1151 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Ccel_0855 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Ccel_0897 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Ccel_0441 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Ccel_1981 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Ccel_3385 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Ccel_2394 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D Ccel_1022 major facilitator superfamily MFS_1 K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein D Ccel_1118 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Ccel_1420 conserved hypothetical protein K08222 yqgE; MFS transporter, YQGE family, putative transporter D Ccel_0806 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr D Ccel_2245 HPrNtr domain-containing protein K02784 ptsH; phosphocarrier protein HPr D Ccel_1425 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D Ccel_3355 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D Ccel_0264 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Ccel_0263 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Ccel_2001 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Ccel_1873 CrcB protein K06199 crcB; fluoride exporter D Ccel_0252 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Ccel_3247 sugar-binding domain protein K21449 ata; trimeric autotransporter adhesin D Ccel_0728 cellulosome anchoring protein cohesin region K21449 ata; trimeric autotransporter adhesin D Ccel_1414 LrgA family protein K06518 cidA; holin-like protein D Ccel_3011 spore germination protein K06296 gerKB; spore germination protein KB D Ccel_1970 spore germination protein K06296 gerKB; spore germination protein KB D Ccel_0652 spore germination protein K06296 gerKB; spore germination protein KB D Ccel_1427 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Ccel_0256 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Ccel_2446 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D Ccel_0514 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Ccel_0424 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Ccel_1757 L-lactate permease, putative K03303 lutP; lactate permease D Ccel_2086 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter D Ccel_2444 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter D Ccel_3109 TrkA-C domain protein K07228 khtT; K+:H+ antiporter subunit KhtT D Ccel_3108 sodium/hydrogen exchanger K26732 khtU; K+:H+ antiporter subunit KhtU D Ccel_2080 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Ccel_2082 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Ccel_2083 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Ccel_0485 uracil-xanthine permease K02824 uraA; uracil permease D Ccel_0209 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Ccel_0796 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein D Ccel_2741 arsenical-resistance protein K03325 ACR3; arsenite transporter D Ccel_2480 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B D Ccel_2939 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B D Ccel_0675 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Ccel_2186 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins D Ccel_2597 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Ccel_2596 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Ccel_3408 conserved hypothetical protein K23675 fmnP; riboflavin transporter D Ccel_2120 proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter D Ccel_0482 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Ccel_1412 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein D Ccel_2294 Inorganic H pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Ccel_1736 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Ccel_1738 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D Ccel_1737 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Ccel_1660 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Ccel_1634 molybdopterin oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D Ccel_2264 hypothetical protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter D Ccel_1997 small GTP-binding protein K04759 feoB; ferrous iron transport protein B D Ccel_0293 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:cce02044] D Ccel_2410 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Ccel_2779 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Ccel_2411 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Ccel_2414 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Ccel_2412 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Ccel_2409 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Ccel_2406 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO D Ccel_2413 twitching motility protein K02669 pilT; twitching motility protein PilT D Ccel_0512 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Ccel_2778 SAF domain protein K02279 cpaB; pilus assembly protein CpaB D Ccel_2776 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Ccel_0503 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Ccel_0114 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Ccel_0504 Flp pilus assembly protein TadB-like protein K12510 tadB; tight adherence protein B D Ccel_0505 hypothetical protein K12511 tadC; tight adherence protein C D Ccel_0598 protein of unknown function YGGT K02221 yggT; YggT family protein D Ccel_2774 conserved hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D Ccel_1371 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Ccel_0261 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Ccel_1955 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Ccel_0664 conserved hypothetical protein K02241 comFB; competence protein ComFB D Ccel_2031 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Ccel_2032 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Ccel_0719 flagellar biosynthesis protein K04061 flhB2; flagellar biosynthesis protein D Ccel_2051 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Ccel_2049 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Ccel_2048 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Ccel_2038 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Ccel_2036 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Ccel_2035 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Ccel_2034 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Ccel_2033 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Ccel_2738 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D Ccel_3153 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D Ccel_2271 SecA DEAD domain protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Ccel_1457 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Ccel_0536 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Ccel_0306 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Ccel_0537 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Ccel_2253 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Ccel_0778 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Ccel_0709 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Ccel_0697 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Ccel_0531 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Ccel_3488 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:cce02042] D Ccel_1572 hypothetical protein K10954 zot; zona occludens toxin D Ccel_1583 hypothetical protein K10954 zot; zona occludens toxin D Ccel_1594 hypothetical protein K10954 zot; zona occludens toxin D Ccel_0252 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:cce02022] D Ccel_2107 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Ccel_2106 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Ccel_0246 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD D Ccel_3393 PAS/PAC sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Ccel_3394 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Ccel_2658 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Ccel_1892 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Ccel_1864 Sensor DegS domain protein K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Ccel_1863 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU D Ccel_2145 histidine kinase K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3] D Ccel_1894 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Ccel_2425 response regulator receiver protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Ccel_2315 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Ccel_2027 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Ccel_2037 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_2316 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_1794 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_2310 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Ccel_2028 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Ccel_1227 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0199 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1137 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1983 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_2114 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0148 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_2453 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1646 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_3248 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_1250 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0945 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_0994 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Ccel_2452 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_2113 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_0147 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_0198 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_0995 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_1228 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_3249 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_1138 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_1645 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_1982 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_1251 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_0149 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Ccel_0944 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN C 02035 Bacterial motility proteins [BR:cce02035] D Ccel_2315 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Ccel_2027 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Ccel_2314 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_0588 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_2099 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_2026 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Ccel_2279 CheC domain protein K03409 cheX; chemotaxis protein CheX D Ccel_2025 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Ccel_2024 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Ccel_1727 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Ccel_2310 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Ccel_2028 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Ccel_2037 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_2316 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_1794 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Ccel_2179 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0219 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0221 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0287 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0493 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0496 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2237 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2313 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2636 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2886 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2888 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_3226 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_3234 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_1383 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_0049 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Ccel_2049 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Ccel_2048 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Ccel_2047 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Ccel_2036 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Ccel_2035 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Ccel_2034 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Ccel_2033 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Ccel_2031 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Ccel_2032 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Ccel_2050 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Ccel_2039 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Ccel_2038 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Ccel_2051 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Ccel_2052 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Ccel_2045 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Ccel_2054 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Ccel_2053 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Ccel_2044 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Ccel_3101 protein of unknown function DUF1078 domain protein K02391 flgF; flagellar basal-body rod protein FlgF D Ccel_3100 protein of unknown function DUF1078 domain protein K02392 flgG; flagellar basal-body rod protein FlgG D Ccel_3099 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Ccel_2042 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE D Ccel_0094 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Ccel_0095 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Ccel_0096 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Ccel_0103 conserved hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D Ccel_0100 flagellin domain protein K02406 fliC; flagellin D Ccel_0102 flagellin domain protein K02406 fliC; flagellin D Ccel_0101 flagellin domain protein K02406 fliC; flagellin D Ccel_0105 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2 D Ccel_0106 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Ccel_2022 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Ccel_0264 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Ccel_0263 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Ccel_0098 protein of unknown function DUF180 K13626 fliW; flagellar assembly factor FliW D Ccel_0104 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Ccel_2041 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD D Ccel_2030 GTP-binding signal recognition particle SRP54 G-domain protein K02404 flhF; flagellar biosynthesis protein FlhF D Ccel_2029 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Ccel_2774 conserved hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D Ccel_2413 twitching motility protein K02669 pilT; twitching motility protein PilT D Ccel_2411 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Ccel_2414 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Ccel_2412 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Ccel_2410 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Ccel_2779 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Ccel_2406 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO D Ccel_2409 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Ccel_0512 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Ccel_2778 SAF domain protein K02279 cpaB; pilus assembly protein CpaB D Ccel_2776 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Ccel_0503 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Ccel_0114 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cce04812] D Ccel_2563 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Ccel_3102 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Ccel_2064 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Ccel_2065 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Ccel_2559 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Ccel_2558 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Ccel_2557 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Ccel_0007 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Ccel_3164 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Ccel_0008 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ccel_3483 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ccel_3163 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Ccel_3306 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cce04147] D Ccel_0492 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Ccel_2254 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Ccel_2275 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Ccel_2260 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Ccel_2569 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Ccel_0721 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Ccel_1382 band 7 protein K07192 FLOT; flotillin D Ccel_0392 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Ccel_1798 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Ccel_1445 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Ccel_0394 IMP dehydrogenase/GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Ccel_0318 translation elongation factor Tu K02358 tuf; elongation factor Tu D Ccel_2095 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Ccel_2485 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Ccel_0137 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Ccel_1069 cytochrome b5 K17278 PGRMC1_2; membrane-associated progesterone receptor component D Ccel_0896 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_1369 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_2472 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_3252 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_1626 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Ccel_2168 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Ccel_0779 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Ccel_0414 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Ccel_1952 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Ccel_1344 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Ccel_1345 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Ccel_3238 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Ccel_0053 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Ccel_2595 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Ccel_1031 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Ccel_0561 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Ccel_1279 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Ccel_0930 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Ccel_1189 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Ccel_2181 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Ccel_1009 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] C 02048 Prokaryotic defense system [BR:cce02048] D Ccel_1482 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Ccel_3119 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Ccel_3118 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Ccel_1483 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Ccel_1476 metal dependent phosphohydrolase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Ccel_1481 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Ccel_1480 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2 D Ccel_1477 CRISPR-associated protein Cas5 family K19119 cas5d; CRISPR-associated protein Cas5d D Ccel_3120 CRISPR-associated protein, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D Ccel_2726 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Ccel_2722 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Ccel_2724 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Ccel_2725 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Ccel_0834 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Ccel_2787 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Ccel_2549 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2867 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2841 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Ccel_2845 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D Ccel_0568 hypothetical protein K07448 mrr; restriction system protein D Ccel_2924 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Ccel_2945 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Ccel_2925 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Ccel_1497 conserved hypothetical protein K21494 yxxD; antitoxin YxxD D Ccel_2064 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Ccel_2563 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Ccel_3102 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Ccel_2139 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Ccel_1932 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Ccel_1684 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cce01504] D Ccel_1539 GCN5-related N-acetyltransferase K18815 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82] D Ccel_2808 DNA polymerase beta domain protein region K19279 ant9; aminoglycoside 9-adenylyltransferase [EC:2.7.7.-] D Ccel_1053 small GTP-binding protein K18220 tetM; ribosomal protection tetracycline resistance protein D Ccel_3229 ABC transporter related K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D Ccel_1118 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Ccel_1049 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] D Ccel_1301 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Ccel_0725 Beta-lactamase class A-like protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Ccel_2658 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Ccel_1022 major facilitator superfamily MFS_1 K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cce00537] D Ccel_0930 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Ccel_0721 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cce03100] D Ccel_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Ccel_R0008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Ccel_R0013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Ccel_R0083 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Ccel_R0037 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Ccel_R0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Ccel_R0085 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Ccel_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Ccel_R0070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Ccel_R0011 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Ccel_R0056 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Ccel_R0016 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Ccel_R0062 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Ccel_R0068 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Ccel_R0065 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Ccel_R0035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Ccel_R0045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Ccel_R0053 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Ccel_R0063 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Ccel_R0072 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Ccel_R0077 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Ccel_R0054 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Ccel_R0030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Ccel_R0055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Ccel_R0066 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Ccel_R0033 tRNA-His K14226 tRNA-His; tRNA His D Ccel_R0019 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Ccel_R0025 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Ccel_R0075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Ccel_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Ccel_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Ccel_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Ccel_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Ccel_R0023 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Ccel_R0047 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Ccel_R0048 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Ccel_R0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Ccel_R0064 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Ccel_R0073 tRNA-Met K14230 tRNA-Met; tRNA Met D Ccel_R0017 tRNA-Met K14230 tRNA-Met; tRNA Met D Ccel_R0042 tRNA-Met K14230 tRNA-Met; tRNA Met D Ccel_R0074 tRNA-Met K14230 tRNA-Met; tRNA Met D Ccel_R0043 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Ccel_R0067 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Ccel_R0080 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Ccel_R0049 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Ccel_R0029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Ccel_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Ccel_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Ccel_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Ccel_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Ccel_R0078 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Ccel_R0061 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Ccel_R0046 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Ccel_R0076 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Ccel_R0022 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Ccel_R0044 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Ccel_R0060 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Ccel_R0069 tRNA-Val K14237 tRNA-Val; tRNA Val D Ccel_R0079 tRNA-Val K14237 tRNA-Val; tRNA Val D Ccel_R0071 tRNA-Val K14237 tRNA-Val; tRNA Val D Ccel_R0052 tRNA-Val K14237 tRNA-Val; tRNA Val D Ccel_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0059 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0088 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0084 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0036 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Ccel_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0082 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0087 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Ccel_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0039 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0081 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0021 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0086 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Ccel_R0006 ffs; SRP RNA; RNA component of signal recognitionparti cle K01983 ffs; SRP RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Ccel_2603 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D Ccel_3449 Transketolase domain protein K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D Ccel_3224 Alcohol dehydrogenase GroES domain protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-] D Ccel_0952 Alcohol dehydrogenase GroES domain protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-] D Ccel_0667 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Ccel_1389 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Ccel_0668 pyruvate ferredoxin/flavodoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Ccel_1390 pyruvate ferredoxin/flavodoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Ccel_1128 Saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D Ccel_0642 NAD(P)H dehydrogenase (quinone) K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D Ccel_2234 ferredoxin K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3] D Ccel_2236 NADH-quinone oxidoreductase, E subunit K18330 hndA; NADP-reducing hydrogenase subunit HndA [EC:1.12.1.3] D Ccel_2233 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3] D Ccel_2232 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D Ccel_2467 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D Ccel_2756 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Ccel_3474 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D Ccel_0043 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2] D Ccel_2546 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Ccel_1068 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Ccel_0703 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D Ccel_2581 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Ccel_0110 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Ccel_1691 NADH/Ubiquinone/plastoquinone (complex I) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D Ccel_1689 hydrogenase, membrane subunit 2-like protein K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D Ccel_1688 NADH/Ubiquinone/plastoquinone (complex I) K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D Ccel_2429 putative RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D Ccel_1088 GCN5-related N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D Ccel_0026 GCN5-related N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D Ccel_3003 glycosidase PH1107-related K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281] D Ccel_3001 glycosidase PH1107-related K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320] D Ccel_2205 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D Ccel_0473 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Ccel_0961 Radical SAM domain protein K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-] D Ccel_1523 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Ccel_1117 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Ccel_3062 DNA-directed DNA polymerase K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7] D Ccel_2856 DNA-directed DNA polymerase K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7] D Ccel_2751 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Ccel_2318 diguanylate cyclase K18967 dge1; diguanylate cyclase [EC:2.7.7.65] D Ccel_0337 protein of unknown function DUF147 K07067 disA; diadenylate cyclase [EC:2.7.7.85] D Ccel_1201 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Ccel_2388 pyruvate phosphate dikinase PEP/pyruvate-binding K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D Ccel_2285 anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D Ccel_2293 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Ccel_0326 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D Ccel_1262 protein of unknown function DUF303 acetylesterase putative K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D Ccel_0191 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Ccel_1260 putative esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-] D Ccel_0086 conserved hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D Ccel_1462 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Ccel_1211 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Ccel_2986 stage II sporulation protein E, protein serine/threonine phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D Ccel_0818 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Ccel_0662 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-] D Ccel_0080 phosphoesterase RecJ domain protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D Ccel_0575 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Ccel_0168 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Ccel_0931 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Ccel_0750 glycoside hydrolase family 11 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Ccel_1230 Carbohydrate binding family 6 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Ccel_2319 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Ccel_2320 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Ccel_1866 glycoside hydrolase family 11 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Ccel_0153 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Ccel_2123 glycosyl hydrolase 53 domain protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D Ccel_1242 Carbohydrate binding family 6 K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136] D Ccel_0649 cellulosome protein dockerin type I K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136] D Ccel_0141 Glycosyl hydrolase 67 middle domain protein K01235 aguA; alpha-glucuronidase [EC:3.2.1.139] D Ccel_1207 cellulosome protein dockerin type I K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155] D Ccel_1258 glycoside hydrolase family 8 K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156] D Ccel_1298 glycoside hydrolase family 8 K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156] D Ccel_2455 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D Ccel_1004 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D Ccel_1111 glycoside hydrolase family 18 K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-] D Ccel_2818 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Ccel_0038 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Ccel_1528 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Ccel_2251 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Ccel_0286 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Ccel_0567 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Ccel_0146 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Ccel_0571 polysaccharide deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D Ccel_2593 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Ccel_2538 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Ccel_1709 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Ccel_0258 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D Ccel_0352 UV-endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D Ccel_0624 Radical SAM domain protein K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D Ccel_2927 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Ccel_0739 cellulosome protein dockerin type I K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23] D Ccel_0417 cellulosome protein dockerin type I K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23] D Ccel_0167 hypothetical protein K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130] D Ccel_0923 ExsB family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Ccel_2204 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Ccel_3002 N-acylglucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11] D Ccel_1010 RbsD or FucU transport K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D Ccel_0941 Xylose isomerase domain protein TIM barrel K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31] D Ccel_0132 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D Ccel_2465 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Ccel_1038 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Ccel_0294 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Ccel_0234 cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D Ccel_3473 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D Ccel_0546 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 fer; ferredoxin D Ccel_1931 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D Ccel_0321 beta-lactamase domain protein K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D Ccel_1610 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB D Ccel_3371 NADH/Ubiquinone/plastoquinone (complex I) K14086 echA; ech hydrogenase subunit A D Ccel_3370 respiratory-chain NADH dehydrogenase subunit 1 K14087 echB; ech hydrogenase subunit B D Ccel_3369 NADH ubiquinone oxidoreductase 20 kDa subunit K14088 echC; ech hydrogenase subunit C D Ccel_3368 NADH dehydrogenase (ubiquinone) 30 kDa subunit K14089 echD; ech hydrogenase subunit D D Ccel_3367 NADH-ubiquinone oxidoreductase chain 49kDa K14090 echE; ech hydrogenase subunit E D Ccel_3366 4Fe-4S ferredoxin iron-sulfur binding domain protein K14091 echF; ech hydrogenase subunit F D Ccel_0631 4Fe-4S ferredoxin iron-sulfur binding domain protein K02574 napH; ferredoxin-type protein NapH C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Ccel_0596 alanine racemase domain protein K06997 yggS; PLP dependent protein D Ccel_0415 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Ccel_1357 cell wall hydrolase, SleB K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D Ccel_1605 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Ccel_2901 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Ccel_2852 AntA/AntB antirepressor domain protein K07741 antB; anti-repressor protein D Ccel_0354 RNA binding S1 domain protein K06959 tex; protein Tex D Ccel_1792 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A D Ccel_0005 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation D Ccel_3080 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein D Ccel_1759 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Ccel_0325 UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator D Ccel_0809 trigger factor K03545 tig; trigger factor D Ccel_0819 SsrA-binding protein K03664 smpB; SsrA-binding protein D Ccel_0463 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Ccel_0464 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Ccel_0465 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Ccel_1681 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE D Ccel_0462 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Ccel_2058 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Ccel_2566 Negative regulator of genetic competence K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D Ccel_2564 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Ccel_0720 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Ccel_1867 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D Ccel_2057 DNA protecting protein DprA K04096 smf; DNA processing protein D Ccel_3051 Terminase small subunit K07474 xtmA; phage terminase small subunit D Ccel_3298 Terminase small subunit K07474 xtmA; phage terminase small subunit D Ccel_3297 putative phage terminase, large subunit K06909 xtmB; phage terminase large subunit D Ccel_3050 putative phage terminase, large subunit K06909 xtmB; phage terminase large subunit D Ccel_1936 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Ccel_3057 virulence-associated E family protein K06919 K06919; putative DNA primase/helicase D Ccel_2850 virulence-associated E family protein K06919 K06919; putative DNA primase/helicase D Ccel_3304 Primase 2 K07505 repA; regulatory protein RepA D Ccel_1485 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_1560 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_2950 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_2694 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_2200 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_2010 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_1828 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_1824 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_0207 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_2372 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_2155 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_1574 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_1585 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_1596 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_1377 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_1162 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_1208 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_0904 transposase IS3/IS911 family protein K07483 K07483; transposase D Ccel_1835 IS66 Orf2 family protein K07484 K07484; transposase D Ccel_2969 IS66 Orf2 family protein K07484 K07484; transposase D Ccel_2706 IS66 Orf2 family protein K07484 K07484; transposase D Ccel_2626 IS66 Orf2 family protein K07484 K07484; transposase D Ccel_2970 transposase IS66 K07484 K07484; transposase D Ccel_2627 transposase IS66 K07484 K07484; transposase D Ccel_2707 transposase IS66 K07484 K07484; transposase D Ccel_1836 transposase IS66 K07484 K07484; transposase D Ccel_1132 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Ccel_2160 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Ccel_2701 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Ccel_2674 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Ccel_1544 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Ccel_1810 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Ccel_1293 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Ccel_1019 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Ccel_0754 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Ccel_0650 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Ccel_0061 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Ccel_0748 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Ccel_2998 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Ccel_2231 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Ccel_2133 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Ccel_2108 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Ccel_1820 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Ccel_1668 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Ccel_3266 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Ccel_1667 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Ccel_0418 transposase mutator type K07493 K07493; putative transposase D Ccel_2675 transposase mutator type K07493 K07493; putative transposase D Ccel_1542 transposase mutator type K07493 K07493; putative transposase D Ccel_2298 transposase IS605 OrfB K07496 K07496; putative transposase D Ccel_0405 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Ccel_2178 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Ccel_2702 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Ccel_2620 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Ccel_2361 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Ccel_0824 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Ccel_0208 Integrase catalytic region K07497 K07497; putative transposase D Ccel_2371 Integrase catalytic region K07497 K07497; putative transposase D Ccel_2154 Integrase catalytic region K07497 K07497; putative transposase D Ccel_2699 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Ccel_2949 Integrase catalytic region K07497 K07497; putative transposase D Ccel_2199 Integrase catalytic region K07497 K07497; putative transposase D Ccel_1559 Integrase catalytic region K07497 K07497; putative transposase D Ccel_1666 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Ccel_1484 Integrase catalytic region K07497 K07497; putative transposase D Ccel_1573 Integrase catalytic region K07497 K07497; putative transposase D Ccel_1584 Integrase catalytic region K07497 K07497; putative transposase D Ccel_1595 Integrase catalytic region K07497 K07497; putative transposase D Ccel_1300 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Ccel_1378 Integrase catalytic region K07497 K07497; putative transposase D Ccel_1829 Integrase catalytic region K07497 K07497; putative transposase D Ccel_2011 Integrase catalytic region K07497 K07497; putative transposase D Ccel_1823 Integrase catalytic region K07497 K07497; putative transposase D Ccel_1163 Integrase catalytic region K07497 K07497; putative transposase D Ccel_1209 Integrase catalytic region K07497 K07497; putative transposase D Ccel_0843 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Ccel_0905 Integrase catalytic region K07497 K07497; putative transposase D Ccel_0839 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Ccel_1849 integrase family protein K14059 int; integrase C 99979 Viral proteins C 99998 Others D Ccel_0025 phage shock protein A, PspA K03969 pspA; phage shock protein A D Ccel_0243 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Ccel_1675 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Ccel_2117 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Ccel_2570 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Ccel_2498 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family C 99978 Cell growth D Ccel_0015 sigmaK-factor processing regulatory BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery D Ccel_0431 putative spore-coat protein K06333 cotJB; spore coat protein JB D Ccel_3487 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein D Ccel_0165 nucleoside recognition domain protein K06373 spmA; spore maturation protein A D Ccel_0166 nucleoside recognition domain protein K06374 spmB; spore maturation protein B D Ccel_2286 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Ccel_1752 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M D Ccel_1944 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D Ccel_0292 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R D Ccel_1916 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA D Ccel_1915 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB D Ccel_1914 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D Ccel_1913 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD D Ccel_1912 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE D Ccel_1911 conserved hypothetical protein K06395 spoIIIAF; stage III sporulation protein AF D Ccel_1910 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG D Ccel_1909 conserved hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH D Ccel_2122 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_2143 Recombinase K06400 spoIVCA; site-specific DNA recombinase D Ccel_0440 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_0427 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_0430 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_2440 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_3078 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_3111 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_2814 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_2816 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_2729 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_2730 Recombinase K06400 spoIVCA; site-specific DNA recombinase D Ccel_2731 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_0845 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Ccel_2282 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D Ccel_2281 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D Ccel_2280 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D Ccel_1705 dipicolinate synthase subunit A K06410 spoVFA; dipicolinate synthase subunit A D Ccel_1704 dipicolinic acid synthetase, B subunit K06411 spoVFB; dipicolinate synthase subunit B D Ccel_3094 SpoVG family protein K06412 spoVG; stage V sporulation protein G D Ccel_2781 SpoVG family protein K06412 spoVG; stage V sporulation protein G D Ccel_0491 SpoVR family protein K06415 spoVR; stage V sporulation protein R D Ccel_0689 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D Ccel_3343 small acid-soluble spore protein alpha/beta type K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP) D Ccel_1561 small acid-soluble spore protein alpha/beta type K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP) D Ccel_3477 small, acid-soluble spore protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP) D Ccel_2500 small, acid-soluble spore protein tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein) D Ccel_0237 peptidase U57 YabG K06436 yabG; spore coat assemly protein D Ccel_0573 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein D Ccel_0654 GerA spore germination protein K06295 gerKA; spore germination protein KA D Ccel_1971 GerA spore germination protein K06295 gerKA; spore germination protein KA D Ccel_0521 GerA spore germination protein K06295 gerKA; spore germination protein KA D Ccel_3014 GerA spore germination protein K06295 gerKA; spore germination protein KA D Ccel_3013 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Ccel_0523 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Ccel_1969 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Ccel_1351 conserved hypothetical protein K06298 gerM; germination protein M D Ccel_0362 cytochrome b5 K06298 gerM; germination protein M D Ccel_0036 germination protein YpeB K06313 ypeB; spore germination protein C 99993 Cell motility C 99995 Signaling proteins D Ccel_1471 GTP-binding protein TypA K06207 typA; GTP-binding protein D Ccel_1723 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D Ccel_0574 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Ccel_0489 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase C 99992 Structural proteins D Ccel_0468 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D Ccel_2105 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Ccel_1647 Integral membrane protein TerC K05794 terC; tellurite resistance protein TerC D Ccel_2297 Integral membrane protein TerC K05794 terC; tellurite resistance protein TerC D Ccel_0173 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Ccel_2484 hemerythrin-like metal-binding protein K07216 hr; hemerythrin B B 09194 Poorly characterized C 99996 General function prediction only D Ccel_2292 PHP domain protein K04477 ycdX; putative hydrolase D Ccel_1449 Patatin K07001 K07001; NTE family protein D Ccel_1966 3-demethylubiquinone-9 3-methyltransferase K04750 phnB; PhnB protein D Ccel_1169 SNARE associated Golgi protein K03975 dedA; membrane-associated protein D Ccel_1960 YhgE/Pip C-terminal domain protein K01421 yhgE; putative membrane protein D Ccel_2873 membrane protein of unknown function K08972 K08972; putative membrane protein D Ccel_0351 putative integral membrane protein K08984 yjdF; putative membrane protein D Ccel_3004 Protein of unknown function DUF1980 K08986 ycgQ; putative membrane protein C 99997 Function unknown D Ccel_1493 Ankyrin K06867 K06867; uncharacterized protein D Ccel_0534 Radical SAM domain protein K06871 K06871; uncharacterized protein D Ccel_2600 Radical SAM domain protein K06871 K06871; uncharacterized protein D Ccel_2370 Radical SAM domain protein K06871 K06871; uncharacterized protein D Ccel_0328 Radical SAM domain protein K06871 K06871; uncharacterized protein D Ccel_0215 protein of unknown function DUF255 K06888 K06888; uncharacterized protein D Ccel_3228 conserved hypothetical protein K06889 K06889; uncharacterized protein D Ccel_0109 conserved hypothetical protein K06889 K06889; uncharacterized protein D Ccel_1511 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W D Ccel_1508 phage protein D K06905 D; Bacteriophage probable baseplate hub protein D Ccel_1501 tail sheath protein K06907 FI; Bacteriophage tail sheath protein D Ccel_3420 protein of unknown function DUF815 K06923 K06923; uncharacterized protein D Ccel_1777 CoA-binding domain protein K06929 K06929; uncharacterized protein D Ccel_0627 protein of unknown function DUF134 K06933 K06933; uncharacterized protein D Ccel_2091 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Ccel_1329 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Ccel_0711 nucleic acid binding protein K06960 K06960; uncharacterized protein D Ccel_1082 photosystem I assembly BtpA K06971 K06971; uncharacterized protein D Ccel_1531 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein D Ccel_0547 amidohydrolase 2 K07045 K07045; uncharacterized protein D Ccel_2494 nitroreductase K07078 K07078; uncharacterized protein D Ccel_2503 aldo/keto reductase K07079 K07079; uncharacterized protein D Ccel_0695 aldo/keto reductase K07079 K07079; uncharacterized protein D Ccel_3250 aldo/keto reductase K07079 K07079; uncharacterized protein D Ccel_2306 aldo/keto reductase K07079 K07079; uncharacterized protein D Ccel_0907 permease K07089 K07089; uncharacterized protein D Ccel_3005 permease K07089 K07089; uncharacterized protein D Ccel_1066 permease K07089 K07089; uncharacterized protein D Ccel_2539 conserved hypothetical protein K07090 K07090; uncharacterized protein D Ccel_2540 permease K07090 K07090; uncharacterized protein D Ccel_1649 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Ccel_1354 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Ccel_2542 metallophosphoesterase K07098 K07098; uncharacterized protein D Ccel_1418 metallophosphoesterase K07098 K07098; uncharacterized protein D Ccel_0808 metallophosphoesterase K07099 K07099; uncharacterized protein D Ccel_1403 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D Ccel_1203 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D Ccel_0906 conserved hypothetical protein K07138 K07138; uncharacterized protein D Ccel_2203 conserved hypothetical protein K07139 K07139; uncharacterized protein D Ccel_3489 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Ccel_2093 GatB/Yqey domain protein K09117 K09117; uncharacterized protein D Ccel_0698 protein of unknown function UPF0182 K09118 K09118; uncharacterized protein D Ccel_0817 protein of unknown function DUF402 K09145 K09145; uncharacterized protein D Ccel_3352 Hemerythrin HHE cation binding domain protein K09155 K09155; uncharacterized protein D Ccel_1722 protein of unknown function DUF711 K09157 K09157; uncharacterized protein D Ccel_1530 protein of unknown function DUF116 K09729 K09729; uncharacterized protein D Ccel_2021 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Ccel_0028 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Ccel_2992 protein of unknown function DUF503 K09764 K09764; uncharacterized protein D Ccel_1682 conserved hypothetical protein K09766 K09766; uncharacterized protein D Ccel_2994 protein of unknown function DUF188 K09768 K09768; uncharacterized protein D Ccel_0158 protein of unknown function DUF327 K09770 K09770; uncharacterized protein D Ccel_3342 protein of unknown function DUF378 K09779 K09779; uncharacterized protein D Ccel_0490 sporulation protein YhbH K09786 K09786; uncharacterized protein D Ccel_0708 putative helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein D Ccel_1236 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein D Ccel_0997 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein D Ccel_3411 GumN family protein K09973 K09973; uncharacterized protein D Ccel_0621 protein of unknown function DUF1287 K09974 K09974; uncharacterized protein D Ccel_2276 conserved hypothetical protein K01163 K01163; uncharacterized protein D Ccel_1321 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein D Ccel_2118 protein of unknown function DUF47 K07220 K07220; uncharacterized protein D Ccel_0455 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 6, 2024