+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Cryptosporidium hominis

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs D Chro.80497 fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D Chro.20013 hypothetical protein K14564 NOP56; nucleolar protein 56 D Chro.30248 snoRNA binding domain K14565 NOP58; nucleolar protein 58 D Chro.60440 ribosomal protein L7A K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D Chro.30435 hypothetical protein K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D Chro.50206 small nucleolar RNP proteins; Gar1p K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D Chro.30105 nucleolar protein, possibly involved in ribosomal RNA pseudouridinylation, in association with snRNAs K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 B 90S particles C U3 small nucleolar RNA-associated proteins D Chro.70129 S4 domain K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D Chro.40308 U3 snoRNP protein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D Chro.70400 At5g66540/K1F13_21 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D Chro.10352 hypothetical protein K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D Chro.20305 WD repeat protein K14558 PWP2; periodic tryptophan protein 2 D Chro.80501 hypothetical protein K14766 NOP14; nucleolar protein 14 D Chro.80362 hypothetical protein K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D Chro.80109 hypothetical protein K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D Chro.70456 YER082C K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D Chro.10072 hypothetical protein K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D Chro.80172 WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D Chro.10229 hypothetical protein K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D Chro.30266 Flj12787-prov protein K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D Chro.50399 transducin / WD-40 repeat protein family K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D Chro.50418 hypothetical protein K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D Chro.10343 hypothetical protein K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D Chro.10322 WD-repeat membrane protein K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D Chro.80130 hypothetical protein K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D Chro.80559 protein; tRNA synthetase class II K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D Chro.70261 hypothetical protein K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D Chro.70038 hypothetical protein K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D Chro.70389 At2g42650/F14N22.8 K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D Chro.30442 DEAD/DEAH box ATP-dependent RNA helicase K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D Chro.40362 DEAD box protein K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D Chro.10035 ATP-dependent RNA helicase K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D Chro.60373 dead box RNA helicase K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D Chro.80471 RNA helicase K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D Chro.50438 ATP-dependent RNA helicase K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D Chro.70440 eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3) K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D Chro.40168 hypothetical protein K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D Chro.70128 hypothetical protein K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D Chro.30487 ENSANGP00000013430 K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D Chro.60083 protein kinase domain K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D Chro.30219 protein kinase Ck2-beta K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D Chro.40319 ribosome biogenesis protein nep1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D Chro.80492 hypothetical protein K14786 KRI1; protein KRI1 D Chro.30334 hypothetical protein K06961 KRR1; ribosomal RNA assembly protein D Chro.60541 RNA-binding domain protein K14787 MRD1; multiple RNA-binding domain-containing protein 1 D Chro.80234 hypothetical protein K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D Chro.30466 cutinase negative acting protein K11294 NCL; nucleolin D Chro.50074 hypothetical protein K14790 NOP9; nucleolar protein 9 D Chro.40309 hypothetical protein K14791 PWP1; periodic tryptophan protein 1 D Chro.80423 RNA 3'-Terminal Phosphate Cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D Chro.80242 rrp5 protein K14792 RRP5; rRNA biogenesis protein RRP5 D Chro.80391 hypothetical protein K14794 RRP12; ribosomal RNA-processing protein 12 D Chro.30026 hypothetical protein K14795 RRP36; ribosomal RNA-processing protein 36 D Chro.80522 hypothetical protein K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D Chro.50179 extragenic suppressor of the bimD6 mutation-related K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D Chro.10303 S-adenosylmethionine-dependent methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D Chro.10192 hypothetical protein K14797 ENP1; essential nuclear protein 1 D Chro.70395 hypothetical protein K14798 LTV1; protein LTV1 D Chro.70180 CG2972 gene product K11883 NOB1; RNA-binding protein NOB1 D Chro.80193 YOR3513c K11884 PNO1; RNA-binding protein PNO1 D Chro.70035 GTP-binding nuclear protein ran/tc4 K07936 RAN; GTP-binding nuclear protein Ran D Chro.30373 protein ad-004 K18532 AK6; adenylate kinase [EC:2.7.4.3] D Chro.50260 ENSANGP00000018078 K14799 TSR1; pre-rRNA-processing protein TSR1 D Chro.80186 hypothetical protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D Chro.20362 programmed cell death 2 K14801 TSR4; pre-rRNA-processing protein TSR4 D Chro.40298 MGC13096 K14801 TSR4; pre-rRNA-processing protein TSR4 D Chro.30346 exportin 1 (chromosome region maintenance protein 1) (caffeine resistance protein 2) K14290 XPO1; exportin-1 D Chro.70341 importin-beta2 K14293 KPNB1; importin subunit beta-1 D Chro.80396 karyopherin (importin) beta 2 K18752 TNPO1; transportin-1 D Chro.70365 karyopherin beta K20222 IPO5; importin-5 C Other pre-40S particles D Chro.30311 ATPase; ATPase, class 1, member a; ATPase 8A2, p type; ATPase 8A2, class I K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D Chro.50303 serine-threonine phosophatase 2C K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D Chro.10119 RNase L inhibitor-like protein K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D Chro.20112 RNA-dependent helicase K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D Chro.30442 DEAD/DEAH box ATP-dependent RNA helicase K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D Chro.60561 DEAD/DEAH box helicase K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D Chro.80030 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D Chro.60555 DEAD/DEAH box RNA helicase K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D Chro.40207 CG8611-PB K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D Chro.30274 hypothetical protein K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D Chro.30193 hypothetical protein K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D Chro.30384 ENSANGP00000021948 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D Chro.80294 ATP-dependent RNA helicase; ATP-dependent RNA helicase K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D Chro.40462 GTPase K14538 NUG1; nuclear GTP-binding protein D Chro.20234 1i973-prov protein K14537 NUG2; nuclear GTP-binding protein D Chro.40193 hypothetical protein K06943 NOG1; nucleolar GTP-binding protein D Chro.20436 GTP-binding protein K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D Chro.60456 elongation factor-like protein K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D Chro.80265 pacman protein K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D Chro.80264 CG10354-PA K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D RNase MRP E Chro.30109 POP4 (processing of precursor, S. cerevisiae) K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E Chro.30196 ribonuclease P (30kD) K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] C Kinases D Chro.60157 hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D Chro.40357 eukaryotic translation initiation factor 6-like protein K03264 EIF6; translation initiation factor 6 D Chro.20010 heat shock protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D Chro.70189 hypothetical protein K14815 MRT4; mRNA turnover protein 4 D Chro.30166 Upf1p-interacting protein; Nmd3p K07562 NMD3; 60S ribosomal export protein NMD3 D Chro.70035 GTP-binding nuclear protein ran/tc4 K07936 RAN; GTP-binding nuclear protein Ran D Chro.80183 hypothetical protein K14816 REI1; pre-60S factor REI1 D Chro.80384 hypothetical protein K14574 SDO1; ribosome maturation protein SDO1 D Chro.30346 exportin 1 (chromosome region maintenance protein 1) (caffeine resistance protein 2) K14290 XPO1; exportin-1 D Chro.70341 importin-beta2 K14293 KPNB1; importin subunit beta-1 D Chro.80396 karyopherin (importin) beta 2 K18752 TNPO1; transportin-1 D Chro.70365 karyopherin beta K20222 IPO5; importin-5 D Chro.30177 dual specificity protein phosphatase K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D Chro.40289 involved in processing ITS2; Ynl182cp K14829 IPI3; pre-rRNA-processing protein IPI3 D Chro.50195 GLP_382_1054_2538 K16912 LAS1; ribosomal biogenesis protein LAS1 C Ribosome quality control proteins D Chro.20309 hypothetical protein K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D Chro.50204 hypothetical protein K24971 NEMF; nuclear export mediator factor NEMF D Chro.10043 cell division cycle protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase D Chro.70227 hypothetical protein K14015 NPLOC4; nuclear protein localization protein 4 D Chro.40141 hypothetical protein K14016 UFD1; ubiquitin fusion degradation protein 1 C Other pre-60S particles D Chro.40174 ENSANGP00000021112 K14820 BRX1; ribosome biogenesis protein BRX1 D Chro.70169 hypothetical protein K14822 CGR1; rRNA-processing protein CGR1 D Chro.60398 hypothetical protein K14823 EBP2; rRNA-processing protein EBP2 D Chro.20393 eukaryotic ribosome biogenesis; Erb1p K14824 ERB1; ribosome biogenesis protein ERB1 D Chro.70034 immunophilin/FKBP-type peptidyl-prolyl cis-trans isomerase K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D Chro.60219 hypothetical protein K14831 MAK16; protein MAK16 D Chro.80478 CCAAT-box-binding transcription factor K14832 MAK21; ribosome biogenesis protein MAK21 D Chro.40084 hypothetical protein K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D Chro.40376 hypothetical protein K14834 NOC3; nucleolar complex protein 3 D Chro.60375 nucleolar protein-like K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D Chro.50265 2810480G15Rik protein K14573 NOP4; nucleolar protein 4 D Chro.30395 hypothetical protein K14837 NOP12; nucleolar protein 12 D Chro.70191 mki67 (FHA domain) interacting nucleolar phosphoprotein (human) - like K14838 NOP15; nucleolar protein 15 D Chro.30461 RIKEN cDNA 5730427N09 gene K14842 NSA2; ribosome biogenesis protein NSA2 D Chro.60121 BRCA1 domain protein K14843 PES1; pescadillo D Chro.50114 hypothetical protein K14844 PUF6; pumilio homology domain family member 6 D Chro.40309 hypothetical protein K14791 PWP1; periodic tryptophan protein 1 D Chro.50178 AAA ATPase K14571 RIX7; ribosome biogenesis ATPase D Chro.20022 hypothetical protein K14846 RPF1; ribosome production factor 1 D Chro.80539 hypothetical protein K14847 RPF2; ribosome production factor 2 D Chro.40382 hypothetical protein K14848 RRB1; ribosome assembly protein RRB1 D Chro.40224 NNP-1/Nop52, novel nuclear protein 1 K14849 RRP1; ribosomal RNA-processing protein 1 D Chro.40433 hypothetical protein K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D Chro.80391 hypothetical protein K14794 RRP12; ribosomal RNA-processing protein 12 D Chro.40143 hypothetical protein K14852 RRS1; regulator of ribosome biosynthesis D Chro.20040 notchless K14855 RSA4; ribosome assembly protein 4 D Chro.20363 severe depolymerization of actin; Sda1p K14856 SDA1; protein SDA1 D Chro.80392 RNA-binding protein K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D Chro.60390 microtubule-associated protein ytm1 K14863 WDR12; ribosome biogenesis protein D Chro.30322 hypothetical protein K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 B Other ribosome biogenesis factors C Chro.60223 hypothetical protein K15262 BCP1; protein BCP1 C Chro.20168 hypothetical protein K15263 LYER; cell growth-regulating nucleolar protein C Chro.70458 hypothetical protein K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C Chro.30278 nuclear DNA-binding protein G2p -related K26736 PA2G4; ERBB-3 binding protein # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D Chro.20013 hypothetical protein K14564 NOP56; nucleolar protein 56 D Chro.80055 60S ribosomal protein L7A K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D Chro.30435 hypothetical protein K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors B ribosomal protein modification factors B rRNA processing factors B rRNA helicases B GTPases B Other maturation factors C Chro.10272 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C Chro.60204 GTP-binding protein K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024