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Transcription Machinery - Cryptosporidium hominis
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E Chro.30301 DNA-directed RNA polymerase II largest chain K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E Chro.70415 DNA-directed RNA polymerase II second largest chain K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E Chro.10306 conjugation stage-specific protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
D Pol II specific subunits
E Chro.30221 DNA-directed RNA polymerase 2 subunit K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
D Pol I, II, III common subunits
E Chro.20109 DNA-directed RNA polymerase 2 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E Chro.70529 DNA-directed RNA polymerase IIa K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E Chro.10257 RNA polymerase subunit 8c K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
E Chro.80107 transcription initiation factor TFIIB K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E Chro.80238 TATA-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E Chro.40082 bromodomain K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
E Chro.10291 transcription initiation factor TFIID subunit K03130 TAF5; transcription initiation factor TFIID subunit 5
D TFIIE
D TFIIF
D TFIIH
E Chro.60062 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E Chro.30353 hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E Chro.60580 transcription factor K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E Chro.20223 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E Chro.80227 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E Chro.70101 DNA repair protein-related K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E Chro.70056 cyclin-dependent kinase-related kinase K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E Chro.10372 transcription/repair factor TFIIH subunit Tfb3 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E Chro.10373 hypothetical protein K06634 CCNH; cyclin H
C Mediator complex
D Head
D Middle
E Chro.10315 OSJNBa0084K01.4 K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E Chro.30376 hypothetical protein K15153 MED31; mediator of RNA polymerase II transcription subunit 31
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
E Chro.30361 histone acetyltransferase K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E Chro.60211 phosphatidylinositol kinase-like protein K08874 TRRAP; transformation/transcription domain-associated protein
E Chro.40107 ADA2-like protein K11314 TADA2A; transcriptional adapter 2-alpha
E Chro.10291 transcription initiation factor TFIID subunit K03130 TAF5; transcription initiation factor TFIID subunit 5
E Chro.10413 chromodomain-helicase-DNA-binding protein, CHD-1-related K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E Chro.80498 hypothetical protein K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E Chro.80487 CG13900 gene product K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
E Chro.20395 SNF2 domain/helicase domain-containing protein K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
E Chro.20189 erythrocyte membrane protein PFEMP3 K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E Chro.30113 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin d3; Rsc6p K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E Chro.80259 BRG1/brm-associated factor 53A K11340 ACTL6A; actin-like protein 6A
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
E Chro.80505 transcription elongation factor TFIIS.h K03145 TFIIS; transcription elongation factor S-II
E Chro.60534 spt5-like transcription initiation protein K15172 SUPT5H; transcription elongation factor SPT5
E Chro.60604 hypothetical protein K11292 SUPT6H; transcription elongation factor SPT6
D Transcription termination factor
E Chro.80059 cleavage and polyadenylation specifity factor protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E Chro.60210 zf-CCCH zinc finger protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E Chro.50279 hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E Chro.70303 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E Chro.80265 pacman protein K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E Chro.80264 CG10354-PA K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D PAF1 complex
E Chro.40226 hypothetical protein K15175 CDC73; parafibromin
E Chro.70390 hypothetical protein K15177 LEO1; RNA polymerase-associated protein LEO1
E Chro.50073 hypothetical protein K15178 RTF1; RNA polymerase-associated protein RTF1
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
E Chro.80553 hypothetical protein K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
E Chro.70469 NLI interacting factor K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
E Chro.50270 hypothetical protein K17498 SPN1; transcription factor SPN1
E Chro.30385 synthetic antigen K20826 RPAP1; RNA polymerase II-associated protein 1
E Chro.60489 ATP binding protein K24104 GPN; GPN-loop GTPase
E Chro.70020 hypothetical protein K24104 GPN; GPN-loop GTPase
E Chro.50190 XPA binding protein 1 K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E Chro.60382 DNA-directed RNA polymerase II/III subunit K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E Chro.80027 DNA-directed RNA polymerase, beta subunit K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
E Chro.80042 DNA-directed RNA polymerase I K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E Chro.40364 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E Chro.60525 DNA-directed RNA polymerases iii 39 Kd polypeptide K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E Chro.10225 hypothetical protein K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
E Chro.70066 hypothetical protein K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
D Pol I, II, III common subunits
E Chro.20109 DNA-directed RNA polymerase 2 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E Chro.70529 DNA-directed RNA polymerase IIa K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E Chro.10257 RNA polymerase subunit 8c K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
C Basal transcription factors
D TFIIIA
E Chro.20127 hypothetical protein K09191 GTF3A; general transcription factor IIIA
D TFIIIB
E Chro.80238 TATA-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E Chro.50018 transcription factor IIIb subunit K15196 BRF1; transcription factor IIIB 90 kDa subunit
E Chro.40147 hypothetical protein K15198 BDP1; transcription factor TFIIIB component B''
D TFIIIC
E Chro.50256 hypothetical protein K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E Chro.20083 hypothetical protein K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
D TFIIIC, fungi type
E Chro.20083 hypothetical protein K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E Chro.50256 hypothetical protein K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
E Chro.70130 hypothetical protein K15210 SNAPC3; snRNA-activating protein complex subunit 3
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E Chro.50317 RNA polymerase A/beta'/A'' subunit K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
E Chro.10312 DNA-directed RNA polymerase I polypeptide 2 (RNA polymerase I subunit 2) K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
E Chro.80042 DNA-directed RNA polymerase I K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E Chro.40364 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
E Chro.10186 hypothetical protein K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43
D Pol I, II, III common subunits
E Chro.20109 DNA-directed RNA polymerase 2 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E Chro.70529 DNA-directed RNA polymerase IIa K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E Chro.10257 RNA polymerase subunit 8c K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
C Basal transcription factors
D SL1/TIF-1B
E Chro.80238 TATA-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C Other transcription-related factors
D UBF
D Transcription initiation factors
E Chro.60326 hypothetical protein K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
D Transcription elongation factors
E Chro.60534 spt5-like transcription initiation protein K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
E Chro.60441 hypothetical protein K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
E Chro.80107 transcription initiation factor TFIIB K03124 TFIIB; transcription initiation factor TFIIB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024