+D GENES KO
#
KEGG Orthology (KO) - Carboxydothermus hydrogenoformans
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:chy00010]
D CHY_0270 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CHY_0239 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHY_1143 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHY_1349 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CHY_0787 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CHY_0128 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHY_1039 conserved hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D CHY_0282 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CHY_0280 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHY_0281 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CHY_0283 gpmI; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CHY_0284 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHY_1144 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CHY_0443 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CHY_0713 lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHY_0043 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1972 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_0577 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1311 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1971 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0044 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_1312 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0576 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0925 putative lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D CHY_0572 acetyl-coenzyme A synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0249 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0659 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0264 acetyl-CoA synthase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
C 00020 Citrate cycle (TCA cycle) [PATH:chy00020]
D CHY_1107 putative isocitrate dehydrogenase, NAD-dependent K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D CHY_0713 lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHY_0043 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1972 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_0577 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1311 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1971 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0044 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_1312 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0576 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_1970 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CHY_0575 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CHY_1313 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CHY_0045 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CHY_0046 putative keto/oxoacid ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CHY_1973 putative keto/oxoacid ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CHY_1310 putative keto/oxoacid ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CHY_0578 putative keto/oxoacid ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CHY_0913 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHY_0912 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHY_1373 fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHY_1370 frdB2; fumarate reductase, iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHY_0064 frdB1; fumarate reductase, iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHY_1372 putative membrane protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHY_0065 putative succinate/fumarate oxidoreductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHY_1371 putative membrane protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CHY_0061 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CHY_1375 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CHY_1374 fumarate hydratase, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CHY_0062 fumarate hydratase, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
C 00030 Pentose phosphate pathway [PATH:chy00030]
D CHY_0239 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHY_1476 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CHY_0165 putative transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHY_0166 putative transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHY_0129 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CHY_2558 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CHY_1552 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CHY_1963 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CHY_0193 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CHY_1747 aor4; aldehyde ferredoxin oxidoreductase, tungsten-containing K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D CHY_1329 aor2; aldehyde ferredoxin oxidoreductase, tungsten-containing K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D CHY_0789 aor1; aldehyde ferredoxin oxidoreductase, tungsten-containing K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D CHY_1712 aor3; aldehyde ferredoxin oxidoreductase, tungsten-containing K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D CHY_0128 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHY_1039 conserved hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D CHY_0787 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CHY_1143 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHY_1349 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:chy00040]
D CHY_1289 hydrolase, UxaA family K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D CHY_1255 hydrolase, UxaA family K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D CHY_1290 hydrolase, UxaA family K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D CHY_1256 hydrolase, UxaA family K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D CHY_2582 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CHY_1476 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CHY_1307 gutB; sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CHY_1320 dapA2; dihydrodipicolinate synthase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
D CHY_1439 fucA1; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D CHY_1555 fucA2; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:chy00051]
D CHY_1439 fucA1; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D CHY_1555 fucA2; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D CHY_1143 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHY_1349 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CHY_0787 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CHY_1307 gutB; sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CHY_0128 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHY_1039 conserved hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D CHY_0282 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CHY_2558 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:chy00052]
D CHY_1057 conserved domain protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHY_0545 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHY_2582 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CHY_0270 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CHY_1143 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHY_1349 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:chy00500]
D CHY_2582 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CHY_0671 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D CHY_0670 otsA; alpha, alpha-trehalose-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D CHY_0270 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CHY_0239 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:chy00520]
D CHY_2010 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHY_2012 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CHY_0192 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CHY_2066 murAB; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHY_2542 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHY_2067 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CHY_2554 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CHY_0270 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CHY_2582 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CHY_1057 conserved domain protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHY_0545 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHY_0239 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:chy00620]
D CHY_0572 acetyl-coenzyme A synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0249 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0659 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0043 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1972 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_0577 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1311 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1971 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0044 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_1312 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0576 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0713 lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHY_1279 mhpF; acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D CHY_0925 putative lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D CHY_1455 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CHY_1456 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CHY_1144 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CHY_1142 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHY_0918 accC1; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHY_1998 accC2; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHY_1141 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHY_0264 acetyl-CoA synthase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CHY_0672 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CHY_2221 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CHY_0066 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CHY_1369 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CHY_1999 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CHY_0061 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CHY_1375 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CHY_1374 fumarate hydratase, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CHY_0062 fumarate hydratase, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CHY_0443 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_0525 putative (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CHY_0521 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CHY_1104 nifV; homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:chy00630]
D CHY_0572 acetyl-coenzyme A synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0249 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0659 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_0916 glyoxalase family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CHY_0309 mutE; methylaspartate mutase, E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D CHY_0307 mamA; methylaspartate mutase, S subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D CHY_0484 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D CHY_0582 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D CHY_0432 putative glycolate oxidase, GlcD subunit K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CHY_1297 glcD; glycolate oxidase, GlcD subunit K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CHY_1298 glcE; glycolate oxidase, GlcE subunit K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CHY_0433 putative glycolate oxidase, iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D CHY_1299 glcF; glycolate oxidase, iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D CHY_0712 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_0704 glnA1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_2557 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHY_0491 gcvPA; glycine dehydrogenase (decarboxylating), subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CHY_0492 gcvPB; glycine dehydrogenase (decarboxylating), subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CHY_0489 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHY_0713 lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHY_0490 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CHY_1268 garK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CHY_0793 fdoG; formate dehydrogenase-O, major subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CHY_0794 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CHY_0795 fdoI; formate dehydrogenase, cytochrome b556 (fdo) subunit K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:chy00640]
D CHY_0572 acetyl-coenzyme A synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0249 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0659 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0264 acetyl-CoA synthase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CHY_1455 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CHY_1456 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CHY_0713 lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHY_1350 bcd2; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CHY_1142 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHY_0918 accC1; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHY_1998 accC2; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHY_1141 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHY_0916 glyoxalase family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CHY_0912 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHY_0913 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHY_0470 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:chy00650]
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1292 hbd1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHY_1603 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHY_1740 hbd3; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHY_1609 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CHY_1293 crt1; 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CHY_1601 crt2; 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CHY_1350 bcd2; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CHY_1279 mhpF; acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D CHY_0919 biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CHY_1373 fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHY_1370 frdB2; fumarate reductase, iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHY_0064 frdB1; fumarate reductase, iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHY_1372 putative membrane protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHY_0065 putative succinate/fumarate oxidoreductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHY_1371 putative membrane protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CHY_1351 cat2; 4-hydroxybutyrate coenzyme A transferase K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-]
D CHY_1314 abfD; gamma-aminobutyrate metabolism dehydratase/isomerase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D CHY_1730 4-hydroxyphenylacetate 3-hydroxylase family protein K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D CHY_0043 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1972 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_0577 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1311 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1971 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0044 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_1312 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0576 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_1742 acyltransferase family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D CHY_0517 ilvB1; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHY_0520 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHY_1594 ilvN2; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CHY_0518 ilvN1; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:chy00660]
D CHY_0517 ilvB1; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHY_0520 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHY_1594 ilvN2; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CHY_0518 ilvN1; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CHY_0912 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHY_0913 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHY_0484 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D CHY_0582 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D CHY_0309 mutE; methylaspartate mutase, E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D CHY_0307 mamA; methylaspartate mutase, S subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D CHY_0522 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CHY_1105 3-isopropylmalate dehydratase, large subunit family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CHY_0523 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CHY_1106 3-isopropylmalate dehydratase, small subunit family protein K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CHY_0524 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:chy00562]
D CHY_0741 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3]
D CHY_0282 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:chy00190]
D CHY_1425 proton-translocating NADH-quinone oxidoreductase, A subunit K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CHY_1424 proton-translocating NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CHY_1423 proton-translocating NADH-quinone oxidoreductase, C subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CHY_1422 proton-translocating NADH-quinone oxidoreductase, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CHY_0731 hydC; Fe-hydrogenase, gamma subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CHY_0732 hydB; Fe-hydrogenase, beta subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CHY_1421 proton-translocating NADH-quinone oxidoreductase, H subunit K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CHY_1420 proton-translocating NADH-quinone oxidoreductase, I subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CHY_1419 proton-translocating NADH-quinone oxidoreductase, J subunit K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CHY_1418 proton-translocating NADH-quinone oxidoreductase, K subunit K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CHY_1417 proton-translocating NADH-quinone oxidoreductase, L subunit K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CHY_1416 proton-translocating NADH-quinone oxidoreductase, M subunit K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CHY_1415 proton-translocating NADH-quinone oxidoreductase, N subunit K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CHY_1373 fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHY_1370 frdB2; fumarate reductase, iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHY_0064 frdB1; fumarate reductase, iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHY_1372 putative membrane protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHY_0065 putative succinate/fumarate oxidoreductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHY_1371 putative membrane protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CHY_2445 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CHY_2444 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CHY_2547 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CHY_2545 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CHY_2546 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CHY_2548 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CHY_2544 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CHY_2551 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CHY_2549 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CHY_2550 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CHY_1358 HAD-superfamily hydrolase, subfamily IA K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes [PATH:chy00720]
D CHY_0443 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CHY_0061 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CHY_1375 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CHY_1374 fumarate hydratase, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CHY_0062 fumarate hydratase, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CHY_1373 fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CHY_1370 frdB2; fumarate reductase, iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHY_0064 frdB1; fumarate reductase, iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CHY_1372 putative membrane protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHY_0065 putative succinate/fumarate oxidoreductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CHY_1371 putative membrane protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CHY_0913 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CHY_0912 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CHY_1314 abfD; gamma-aminobutyrate metabolism dehydratase/isomerase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D CHY_1730 4-hydroxyphenylacetate 3-hydroxylase family protein K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_0043 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1972 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_0577 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1311 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CHY_1971 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0044 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_1312 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_0576 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CHY_1970 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CHY_0575 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CHY_1313 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CHY_0045 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CHY_0046 putative keto/oxoacid ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CHY_1973 putative keto/oxoacid ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CHY_1310 putative keto/oxoacid ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CHY_0578 putative keto/oxoacid ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CHY_1142 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHY_0918 accC1; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHY_1998 accC2; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHY_1141 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHY_0916 glyoxalase family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CHY_0733 fdhA; NAD-dependent formate dehydrogenase, alpha subunit, selenocysteine-containing K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D CHY_2385 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CHY_1878 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CHY_0696 fchA1; methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CHY_1879 fchA2; methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CHY_1233 methylenetetrahydrofolate reductase family protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CHY_1227 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258]
D CHY_0736 cooSIV; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_0034 cooSV; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_0085 cooSII; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_1824 cooSI; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_0735 cooF2; iron-sulfur cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_1825 cooF3; iron-sulfur cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_1713 iron-sulfur cluster-binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_0086 cooF1; iron-sulfur cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_1222 acsB; CO dehydrogenase/acetyl-CoA synthase complex, beta subunit K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]
D CHY_1223 acsC; carbon monoxide dehydrogenase corrinoid/iron-sulfur protein, gamma subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D CHY_1226 acsD; CO dehydrogenase/acetyl-CoA synthase, iron-sulfur protein K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D CHY_1456 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CHY_1455 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CHY_0572 acetyl-coenzyme A synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0249 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0659 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:chy00680]
D CHY_0793 fdoG; formate dehydrogenase-O, major subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CHY_0794 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CHY_0795 fdoI; formate dehydrogenase, cytochrome b556 (fdo) subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CHY_0932 putative dehydrogenase, beta subunit K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6]
D CHY_0733 fdhA; NAD-dependent formate dehydrogenase, alpha subunit, selenocysteine-containing K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D CHY_1223 acsC; carbon monoxide dehydrogenase corrinoid/iron-sulfur protein, gamma subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D CHY_1226 acsD; CO dehydrogenase/acetyl-CoA synthase, iron-sulfur protein K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D CHY_0736 cooSIV; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_0034 cooSV; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_0085 cooSII; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_1824 cooSI; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_0735 cooF2; iron-sulfur cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_1825 cooF3; iron-sulfur cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_1713 iron-sulfur cluster-binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_0086 cooF1; iron-sulfur cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_2557 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHY_0284 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHY_0128 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CHY_1039 conserved hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D CHY_0787 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CHY_1143 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHY_1349 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CHY_2194 putative tungsten formylmethanofuran dehydrogenase, subunit E K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D CHY_1362 coenzyme F420 hydrogenase, beta subunit K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D CHY_1230 iron-sulfur cluster-binding protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D CHY_0929 putative succinate dehydrogenase, subunit C K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D CHY_0714 putative heterodisulfide reductase, B/C subunits K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D CHY_1229 putative succinate dehydrogenase, subunit C K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D CHY_0927 putative heterodisulfide reductase, C subunit K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D CHY_1228 putative heterodisulfide reductase, C subunit K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D CHY_1231 putative hydrogenase, methyl-violgen-reducing type, delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D CHY_0931 hydrogenase, methyl-violgen-reducing type, delta subunit, selenocysteine-containing K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D CHY_1455 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CHY_1456 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CHY_0572 acetyl-coenzyme A synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0249 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0659 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0283 gpmI; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CHY_2698 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHY_1042 2-phosphosulpholactate phosphatase family protein K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:chy00910]
D CHY_0601 napA; nitrate reductase K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2]
D CHY_0608 putative cytochrome c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D CHY_0243 nrfA; cytochrome c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D CHY_0242 putative cytochrome c-type protein NrfH K15876 nrfH; cytochrome c nitrite reductase small subunit
D CHY_1816 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CHY_0712 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_0704 glnA1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_1991 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:chy00920]
D CHY_2689 saT; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CHY_2693 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CHY_2686 putative sulfite reductase, iron-sulfur binding subunit K00385 asrC; anaerobic sulfite reductase subunit C
D CHY_2410 dsrA; dissimilatory sulfite reductase alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D CHY_2409 dsrB; dissimilatory sulfite reductase subunit B K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D CHY_2404 putative nitrate reductase K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D CHY_2403 putative reductase, iron-sulfur cluster-binding subunit K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D CHY_0602 molybdopterin oxidoreductase, iron-sulfur binding subunit K08358 ttrB; tetrathionate reductase subunit B
D CHY_2574 molybdopterin oxidoreductase, molybdopterin-binding subunit K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D CHY_2339 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHY_0808 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CHY_1903 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CHY_2082 ndrA; probable respiratory nitrate reductase alpha subunit K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D CHY_2081 molybdopterin oxidoreductase, iron-sulfur binding subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D CHY_2080 putative molybdopterin oxidoreductase, membrane subunit K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D CHY_1640 conserved hypothetical protein K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:chy00061]
D CHY_1142 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CHY_0918 accC1; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHY_1998 accC2; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CHY_1141 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CHY_1446 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CHY_1448 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CHY_1450 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHY_1445 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHY_1447 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHY_2589 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHY_1449 fabK; enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CHY_2411 fadD5; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1731 fadD3; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1735 fadD4; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_0437 fadD1; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_0845 fadD2; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1613 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:chy00071]
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1743 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1738 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1608 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1609 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CHY_1350 bcd2; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CHY_1732 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CHY_2411 fadD5; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1731 fadD3; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1735 fadD4; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_0437 fadD1; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_0845 fadD2; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1613 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_0925 putative lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:chy00561]
D CHY_1268 garK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CHY_1839 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CHY_1451 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CHY_1918 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CHY_1094 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CHY_1926 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CHY_0428 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CHY_1041 glycosyl transferase, group 1 family K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D CHY_1043 putative glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:chy00564]
D CHY_1917 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CHY_1838 glpA; anaerobic glycerol-3-phosphate dehydrogenase, A subunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CHY_1837 glpB; anaerobic glycerol-3-phosphate dehydrogenase, B subunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D CHY_1836 glpC; anaerobic glycerol-3-phosphate dehydrogenase, C subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D CHY_1918 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CHY_1094 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CHY_1926 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CHY_0428 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CHY_0741 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3]
D CHY_1780 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CHY_0922 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CHY_0921 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CHY_2583 putative glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D CHY_0277 hexapeptide transferase family protein K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
D CHY_0741 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:chy00592]
D CHY_1743 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1738 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1608 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
D CHY_0501 lipase/acylhydrolase, GDSL family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:chy00230]
D CHY_1406 mutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CHY_1963 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CHY_0193 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CHY_1075 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CHY_1079 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CHY_1077 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CHY_1074 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CHY_1072 purS; phosphoribosylformylglycinamidine synthase, purS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CHY_1073 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CHY_1076 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CHY_1069 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CHY_1071 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CHY_1070 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CHY_1078 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CHY_2027 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CHY_0957 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CHY_2048 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CHY_1067 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CHY_1176 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CHY_0215 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CHY_0315 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CHY_1068 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CHY_1488 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CHY_0676 nrdJ; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, intein-containing K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CHY_2051 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CHY_0453 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CHY_2223 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CHY_0211 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CHY_2670 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CHY_0689 ade1; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CHY_0699 ade2; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CHY_2488 5'-nucleotidase domain/Ser/Thr protein phosphatase domain protein K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D CHY_1170 Ser/Thr protein phosphatase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D CHY_1340 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CHY_2693 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CHY_2689 saT; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CHY_1338 hyuE; hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D CHY_0678 allB; allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
C 00240 Pyrimidine metabolism [PATH:chy00240]
D CHY_1499 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CHY_1500 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CHY_1502 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CHY_1501 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CHY_1497 pyrD; dihydroorotate dehydrogenase, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CHY_1498 pyrK; dihydroorotate dehydrogenase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CHY_1495 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CHY_1496 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CHY_1785 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CHY_0215 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CHY_0340 maf; maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CHY_0125 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CHY_1927 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CHY_0957 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CHY_2488 5'-nucleotidase domain/Ser/Thr protein phosphatase domain protein K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D CHY_1503 pyrR; pyrR bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CHY_1170 Ser/Thr protein phosphatase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D CHY_0076 kinase, PfkB family K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
D CHY_0077 indigoidine systhesis protein, homolog K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D CHY_1554 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D CHY_1553 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CHY_2051 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CHY_0676 nrdJ; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, intein-containing K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CHY_2556 putative comE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CHY_0050 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CHY_0300 dut; deoxyuridine 5`-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CHY_0585 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D CHY_2336 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:chy00250]
D CHY_1491 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHY_2373 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CHY_0104 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHY_0666 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CHY_2260 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CHY_2259 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CHY_2670 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CHY_1070 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CHY_1502 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CHY_1991 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CHY_0712 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_0704 glnA1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_1499 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CHY_1500 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CHY_1073 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CHY_2010 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHY_1075 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:chy00260]
D CHY_1155 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHY_1909 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHY_1154 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHY_1912 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CHY_1910 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CHY_1911 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CHY_0904 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CHY_2557 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHY_1268 garK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CHY_0283 gpmI; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CHY_2698 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHY_0491 gcvPA; glycine dehydrogenase (decarboxylating), subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CHY_0492 gcvPB; glycine dehydrogenase (decarboxylating), subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CHY_0489 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHY_0713 lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHY_0490 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CHY_0922 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CHY_0700 sdhB1; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CHY_0701 sdhA1; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CHY_2457 sdhA2; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CHY_2458 sdhB2; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CHY_2459 ilvA2; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CHY_0191 ilvA1; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CHY_0067 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D CHY_1581 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CHY_1582 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CHY_0751 putative tryptophan synthase, beta subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:chy00270]
D CHY_2339 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CHY_0808 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CHY_0138 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CHY_1811 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CHY_1240 speE1; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CHY_1621 speE2; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CHY_2048 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CHY_0698 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D CHY_1438 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D CHY_1441 mtaP; methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D CHY_1556 putative translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D CHY_1440 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CHY_1155 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHY_1909 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHY_1154 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHY_1912 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CHY_1903 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CHY_1904 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CHY_2684 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CHY_0515 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHY_1491 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHY_0700 sdhB1; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CHY_0701 sdhA1; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CHY_2457 sdhA2; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CHY_2458 sdhB2; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CHY_2698 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:chy00280]
D CHY_0515 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHY_0579 ldh; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D CHY_0713 lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHY_1350 bcd2; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CHY_1732 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CHY_1743 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1738 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1608 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_0916 glyoxalase family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1742 acyltransferase family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:chy00290]
D CHY_2459 ilvA2; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CHY_0191 ilvA1; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CHY_0522 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CHY_1105 3-isopropylmalate dehydratase, large subunit family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CHY_0523 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CHY_1106 3-isopropylmalate dehydratase, small subunit family protein K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CHY_0524 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CHY_0517 ilvB1; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHY_0520 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHY_1594 ilvN2; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CHY_0518 ilvN1; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CHY_0519 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CHY_0516 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CHY_0515 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHY_0579 ldh; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D CHY_0525 putative (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CHY_0521 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:chy00300]
D CHY_1912 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CHY_1155 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHY_1909 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHY_1154 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHY_1156 dapA1; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CHY_1151 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CHY_2262 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CHY_2216 peptidase, M20/M25/M40 family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CHY_1493 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CHY_1492 putative aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CHY_1951 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CHY_2074 murE; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CHY_2073 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:chy00310]
D CHY_0713 lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1436 aminotransferase, class III K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
C 00220 Arginine biosynthesis [PATH:chy00220]
D CHY_2261 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CHY_2260 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CHY_2259 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CHY_1073 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CHY_0712 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_0704 glnA1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_1491 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHY_2264 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CHY_2263 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CHY_2265 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CHY_2262 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:chy00330]
D CHY_0049 cad; lysine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CHY_1622 pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D CHY_1620 putative agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D CHY_1240 speE1; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CHY_1621 speE2; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CHY_1811 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CHY_1436 aminotransferase, class III K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D CHY_2041 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CHY_0380 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CHY_0383 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CHY_1491 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:chy00340]
D CHY_1084 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CHY_1083 putative ATP phosphoribosyltransferase, regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CHY_1091 hisIE; histidine biosynthesis bifunctional protein HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CHY_1089 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CHY_1088 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CHY_1090 hisF; imidazole glycerol phosphate synthase, HisF subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CHY_1087 hisB; imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D CHY_1086 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHY_1929 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHY_2084 hisJ; histidinol phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CHY_1234 histidinol phosphate phosphatase family protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CHY_1085 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CHY_0695 ftcD; glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:chy00350]
D CHY_1491 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHY_1086 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHY_1929 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHY_0925 putative lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:chy00360]
D CHY_0120 paaK1; phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D CHY_0728 paaK2; phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D CHY_2254 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D CHY_1292 hbd1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHY_1603 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHY_1740 hbd3; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHY_1491 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHY_1086 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHY_1929 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHY_1322 hydratase/decarboxylase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CHY_1278 hydratase/decarboxylase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CHY_1280 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D CHY_1279 mhpF; acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:chy00380]
D CHY_0713 lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:chy00400]
D CHY_1588 aroF3; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CHY_0475 aroF1; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CHY_1930 aroF4; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CHY_1037 aroF2; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CHY_0629 aroKB; shikimate kinase/3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D CHY_1874 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CHY_0623 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CHY_1928 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CHY_0624 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CHY_1587 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CHY_1586 trpG; para-aminobenzoate/anthranilate synthase glutamine amidotransferase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CHY_1585 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CHY_1583 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CHY_1584 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CHY_1581 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CHY_1582 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CHY_0751 putative tryptophan synthase, beta subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CHY_1932 aroH2; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D CHY_0473 aroH1; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D CHY_1913 pheB; ACT domain protein pheB K06209 pheB; chorismate mutase [EC:5.4.99.5]
D CHY_0474 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CHY_1038 prephenate dehydratase domain protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CHY_1491 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHY_1086 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHY_1929 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:chy00410]
D CHY_2375 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CHY_2376 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CHY_1350 bcd2; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:chy00430]
D CHY_0666 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CHY_1456 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CHY_1455 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:chy00450]
D CHY_0906 trxB1; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CHY_2389 trxB2; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CHY_0560 thioredoxin/thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CHY_2689 saT; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CHY_2058 selD; selenide, water dikinase, selenocysteine-containing K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CHY_1803 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CHY_2621 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D CHY_2557 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:chy00470]
D CHY_0667 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CHY_1346 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHY_1073 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CHY_0306 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CHY_2071 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CHY_0067 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D CHY_1493 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CHY_1951 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:chy00480]
D CHY_2450 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CHY_2449 urea amidolyase-related protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D CHY_1240 speE1; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CHY_1621 speE2; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:chy00542]
D CHY_2588 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:chy00541]
D CHY_2582 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CHY_1057 conserved domain protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHY_0545 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CHY_0976 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHY_0979 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHY_0977 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CHY_0978 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CHY_0192 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CHY_2554 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:chy00550]
D CHY_2066 murAB; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHY_2542 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHY_2067 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CHY_2068 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CHY_2071 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CHY_2074 murE; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CHY_1346 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHY_2073 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CHY_0237 putative undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CHY_1781 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CHY_1158 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHY_1850 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHY_2072 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CHY_2069 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CHY_1563 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHY_0345 peptidoglycan biosynthesis transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CHY_2075 pbpB; penicillin-binding protein 2B K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CHY_2101 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CHY_1962 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CHY_1147 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CHY_0246 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CHY_0247 conserved hypothetical protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:chy00552]
D CHY_1158 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHY_1850 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHY_2588 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CHY_2585 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CHY_2587 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase family protein K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44]
D CHY_2591 putative transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CHY_1043 putative glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CHY_1041 glycosyl transferase, group 1 family K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:chy00543]
D CHY_2588 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CHY_2339 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:chy00730]
D CHY_0747 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CHY_1264 moeB; molybdopterin biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D CHY_2199 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHY_1263 thiH; thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CHY_1549 putative thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CHY_1985 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CHY_1262 thiG; thiamine biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CHY_0748 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CHY_0746 putative thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CHY_1265 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CHY_0749 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CHY_1477 GTP-binding protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CHY_0231 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CHY_1340 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:chy00740]
D CHY_1473 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CHY_1475 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CHY_1472 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CHY_1474 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CHY_1762 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CHY_0748 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CHY_1406 mutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CHY_0680 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:chy00750]
D CHY_1911 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CHY_2703 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D CHY_2702 glutamine amidotransferase, SNO family K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:chy00760]
D CHY_2373 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CHY_2374 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CHY_2372 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CHY_1276 putative nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CHY_0957 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CHY_2488 5'-nucleotidase domain/Ser/Thr protein phosphatase domain protein K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D CHY_0388 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CHY_1526 nadE; NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CHY_1165 competence/damage-inducible family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CHY_0257 transcriptional regulator, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CHY_1983 ppnK; ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CHY_0690 coxM; carbon monoxide dehydrogenase, medium subunit K20445 ndhF; nicotinate dehydrogenase FAD-subunit [EC:1.17.1.5]
C 00770 Pantothenate and CoA biosynthesis [PATH:chy00770]
D CHY_0517 ilvB1; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHY_0520 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CHY_1594 ilvN2; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CHY_0518 ilvN1; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CHY_0519 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CHY_0516 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CHY_2377 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CHY_2376 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CHY_2370 puatative transcriptional activator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CHY_1486 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CHY_1459 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CHY_1647 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CHY_0664 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CHY_0515 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CHY_2375 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:chy00780]
D CHY_1445 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHY_1447 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHY_2589 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHY_2448 radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D CHY_0889 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CHY_2371 birA; BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:chy00785]
D CHY_0495 biotin/lipoate A/B protein ligase family protein K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CHY_0493 radical SAM domain protein K09711 lipS1; lipoyl synthase
D CHY_0494 radical SAM domain protein K24689 lipS2; lipoyl synthase
D CHY_0713 lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHY_0491 gcvPA; glycine dehydrogenase (decarboxylating), subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CHY_0492 gcvPB; glycine dehydrogenase (decarboxylating), subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CHY_0489 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHY_0490 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:chy00790]
D CHY_0955 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CHY_2382 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CHY_2381 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CHY_2383 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CHY_0335 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CHY_1473 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CHY_1931 pabA; para-aminobenzoate/anthranilate synthase glutamine amidotransferase, component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D CHY_1046 pabB; para-aminobenzoate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D CHY_2669 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CHY_0951 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CHY_0954 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CHY_0952 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CHY_0802 moaA; molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CHY_0803 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CHY_0798 putative molybdopterin biosynthesis moeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CHY_0867 putative molybdopterin biosynthesis moeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CHY_0799 putative molybdopterin biosynthesis moeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CHY_0866 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:chy00670]
D CHY_2385 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CHY_1878 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CHY_0696 fchA1; methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CHY_1879 fchA2; methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CHY_2557 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CHY_1077 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CHY_1078 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CHY_0695 ftcD; glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D CHY_1483 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CHY_0489 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CHY_2336 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CHY_1233 methylenetetrahydrofolate reductase family protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CHY_0730 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:chy00860]
D CHY_1207 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CHY_1212 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CHY_1210 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CHY_1208 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CHY_0483 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CHY_0481 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D CHY_0482 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CHY_2407 uroporphyrinogen III synthase/methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CHY_0778 cobA; uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CHY_0754 siroheme synthase, N-terminal domain protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D CHY_1211 radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D CHY_0766 cbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CHY_0761 putative precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D CHY_0764 cobJ; precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D CHY_0762 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CHY_0763 cbiG; cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D CHY_0765 cobK; precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CHY_0758 cobalamin/cobalt ABC transporter, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CHY_0760 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D CHY_0759 Precorrin-6Y C5,15-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D CHY_0767 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CHY_0771 cobB1; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CHY_2399 cobB2; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CHY_0571 putative cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CHY_2619 cobO; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CHY_0769 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CHY_0770 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CHY_0768 cobP; cobalamin biosynthesis protein CobP K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CHY_0779 putative cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CHY_0480 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CHY_0772 putative kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:chy00130]
D CHY_1807 putative 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CHY_1808 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D CHY_0680 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CHY_1809 menG; 2-heptaprenyl-1,4-naphthoquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CHY_1805 conserved hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D CHY_1806 radical SAM domain protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D CHY_1804 radical SAM domain protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:chy00900]
D CHY_1985 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CHY_1778 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CHY_2342 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CHY_0188 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CHY_2341 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CHY_1776 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CHY_1925 hydroxymethylbutenyl pyrophosphate reductase/ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1742 acyltransferase family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D CHY_0680 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CHY_1988 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CHY_1206 hepT; heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D CHY_0237 putative undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CHY_1781 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:chy00907]
D CHY_1743 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1738 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1608 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CHY_0165 putative transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CHY_0166 putative transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:chy00523]
D CHY_0976 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHY_0979 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHY_0977 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CHY_0978 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:chy01055]
D CHY_1319 dehydrogenase, FMN-dependent family K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CHY_0269 dehydrogenase, FMN-dependent family K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CHY_0979 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:chy00332]
D CHY_0380 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CHY_0383 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:chy00261]
D CHY_1319 dehydrogenase, FMN-dependent family K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CHY_0269 dehydrogenase, FMN-dependent family K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CHY_2689 saT; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CHY_1155 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHY_1909 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CHY_1154 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CHY_1156 dapA1; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CHY_1151 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:chy00521]
D CHY_0270 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CHY_0976 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHY_0979 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CHY_0977 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CHY_0978 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CHY_0270 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:chy00525]
D CHY_0976 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CHY_0979 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:chy00401]
D CHY_0474 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CHY_1491 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHY_1086 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHY_1929 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CHY_1587 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CHY_1586 trpG; para-aminobenzoate/anthranilate synthase glutamine amidotransferase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CHY_1448 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CHY_1447 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CHY_1446 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:chy00999]
D CHY_0138 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CHY_0623 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:chy00362]
D CHY_1743 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1738 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1608 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1322 hydratase/decarboxylase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CHY_1278 hydratase/decarboxylase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CHY_1280 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D CHY_1279 mhpF; acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D CHY_0734 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CHY_0887 putative 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CHY_1609 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CHY_1737 acyl-CoA dehydrogenase, short-chain specific K16173 acd; glutaryl-CoA dehydrogenase (non-decarboxylating) [EC:1.3.99.32]
D CHY_0919 biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CHY_1292 hbd1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHY_1603 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHY_1740 hbd3; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D CHY_0680 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:chy00625]
D CHY_0925 putative lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:chy00622]
D CHY_0734 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CHY_0887 putative 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CHY_1322 hydratase/decarboxylase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CHY_1278 hydratase/decarboxylase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CHY_1280 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D CHY_1279 mhpF; acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation [PATH:chy00633]
D CHY_1545 [Ni/Fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CHY_1546 [Ni/Fe] hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CHY_0736 cooSIV; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_0034 cooSV; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_0085 cooSII; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_1824 cooSI; carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CHY_0735 cooF2; iron-sulfur cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_1825 cooF3; iron-sulfur cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_1713 iron-sulfur cluster-binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_0086 cooF1; iron-sulfur cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CHY_2410 dsrA; dissimilatory sulfite reductase alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D CHY_2409 dsrB; dissimilatory sulfite reductase subunit B K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
C 00642 Ethylbenzene degradation
D CHY_1743 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1738 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CHY_1608 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D CHY_1744 acyl-CoA dehydrogenase, short-chain specific K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:chy00621]
D CHY_0734 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CHY_0887 putative 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CHY_1322 hydratase/decarboxylase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CHY_1278 hydratase/decarboxylase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CHY_1280 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D CHY_1279 mhpF; acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:chy00626]
D CHY_0925 putative lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:chy03020]
D CHY_2318 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CHY_2317 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CHY_2281 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CHY_1487 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:chy03010]
D CHY_1925 hydroxymethylbutenyl pyrophosphate reductase/ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CHY_1787 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CHY_2303 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CHY_2282 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CHY_2292 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CHY_0035 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CHY_2314 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CHY_2295 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CHY_2273 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CHY_2310 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CHY_2283 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CHY_2315 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CHY_2284 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CHY_2296 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CHY_1760 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CHY_1433 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CHY_2300 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CHY_0037 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CHY_2305 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CHY_0406 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CHY_0421 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CHY_2322 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CHY_2306 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CHY_2309 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CHY_2308 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CHY_2297 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CHY_2294 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CHY_2320 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CHY_0039 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CHY_2321 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CHY_2323 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CHY_2274 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CHY_2299 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CHY_2290 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CHY_2302 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CHY_2280 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CHY_2293 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CHY_1428 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CHY_1576 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CHY_0367 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CHY_2304 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CHY_2307 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CHY_2298 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CHY_0195 rplY; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CHY_0368 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CHY_1469 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CHY_2301 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CHY_2291 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CHY_2565 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CHY_1453 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CHY_2326 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CHY_0001 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CHY_1577 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CHY_2285 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CHY_2316 ribosomal protein L7ae family protein K07590 RP-L7A; large subunit ribosomal protein L7A
D CHY_Ch16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch16SC rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch16SD rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHY_Ch23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHY_Ch23SD rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHY_Ch23SC rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHY_Ch5SB rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHY_Ch5SD rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHY_Ch5SC rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHY_Ch5SA rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:chy00970]
D CHY_tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CHY_tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CHY_tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CHY_tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHY_tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHY_tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHY_tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHY_tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CHY_tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CHY_tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CHY_tRNA-Cys-1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CHY_tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CHY_tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CHY_tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CHY_tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CHY_tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHY_tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHY_tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHY_tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHY_tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHY_tRNA-His-1 tRNA-His K14226 tRNA-His; tRNA His
D CHY_tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CHY_tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHY_tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHY_tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHY_tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHY_tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHY_tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CHY_tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CHY_tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHY_tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHY_tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHY_tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CHY_tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CHY_tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CHY_tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CHY_tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHY_tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHY_tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHY_tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHY_tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHY_tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHY_tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHY_tRNA-Trp-1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CHY_tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CHY_tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D CHY_tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D CHY_tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D CHY_tRNA-SeC-1 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CHY_2340 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CHY_1102 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CHY_1103 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CHY_1101 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CHY_0538 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CHY_2204 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHY_0439 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CHY_0440 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CHY_1579 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CHY_2697 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CHY_1803 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CHY_2338 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CHY_2621 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CHY_1483 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CHY_0334 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CHY_0393 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHY_0534 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CHY_2365 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CHY_0124 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHY_1775 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CHY_2205 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CHY_1571 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CHY_1570 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CHY_1561 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHY_1947 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:chy03060]
D CHY_2289 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CHY_2325 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CHY_0285 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CHY_1512 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CHY_1511 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CHY_1514 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CHY_0004 sporulation associated-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHY_0162 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHY_1434 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CHY_1442 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CHY_2570 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CHY_0865 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CHY_0870 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CHY_0863 sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CHY_1360 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CHY_1506 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:chy04122]
D CHY_2199 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHY_2577 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CHY_2197 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CHY_1080 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CHY_1081 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CHY_0802 moaA; molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CHY_1746 thiS2; thiamine biosynthesis protein ThiS K03636 moaD; sulfur-carrier protein
D CHY_1711 conserved hypothetical protein K03636 moaD; sulfur-carrier protein
D CHY_0792 moaE; molybdopterin converting factor, subunit 2 K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CHY_0803 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CHY_1261 thiS1; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D CHY_2688 thiS3; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D CHY_0791 moaD; molybdopterin converting factor, subunit 1 K03154 thiS; sulfur carrier protein
D CHY_1264 moeB; molybdopterin biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:chy03018]
D CHY_0284 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHY_1758 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CHY_0289 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CHY_0229 ATP-dependent RNA helicase, DEAD box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHY_0130 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CHY_1168 HDIG/KH domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CHY_1157 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CHY_1143 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHY_0415 dnaK; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D CHY_0807 chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHY_1393 hfq; hfq protein K03666 hfq; host factor-I protein
D CHY_2440 polyA polymerase/tRNA nucleotidyltransferase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:chy03030]
D CHY_2036 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHY_1137 dnaE2; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHY_0959 dnaE1; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHY_1772 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CHY_2675 putative DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHY_0051 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHY_0405 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHY_2709 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHY_0041 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CHY_0454 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CHY_2640 DNA primase, internal deletion K02316 dnaG; DNA primase [EC:2.7.7.101]
D CHY_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHY_0852 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CHY_1426 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CHY_1650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHY_1100 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:chy03410]
D CHY_1121 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CHY_1567 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CHY_1649 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CHY_0179 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CHY_1757 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CHY_1650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHY_2224 recJ; single-stranded DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHY_1100 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:chy03420]
D CHY_0200 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CHY_0259 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CHY_0258 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CHY_0267 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CHY_1099 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHY_1650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHY_1100 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:chy03430]
D CHY_1397 hexA; DNA mismatch repair protein HexA K03555 mutS; DNA mismatch repair protein MutS
D CHY_1564 mutS2; DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D CHY_1396 hexB; DNA mismatch repair protein HexB K03572 mutL; DNA mismatch repair protein MutL
D CHY_1099 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHY_1990 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CHY_1989 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CHY_2224 recJ; single-stranded DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHY_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHY_1137 dnaE2; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHY_0959 dnaE1; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHY_1772 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CHY_2709 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHY_2675 putative DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHY_0405 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHY_0051 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHY_2036 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHY_1100 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CHY_2213 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:chy03440]
D CHY_2224 recJ; single-stranded DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHY_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHY_2707 recF; DNA recombination/replication protein RecF K03629 recF; DNA replication and repair protein RecF
D CHY_0438 putative DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CHY_2673 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CHY_1166 recA; recA protein K03553 recA; recombination protein RecA
D CHY_1650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHY_1523 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CHY_1522 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CHY_1524 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CHY_1468 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CHY_1815 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CHY_1137 dnaE2; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHY_0959 dnaE1; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHY_1772 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CHY_2709 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHY_2675 putative DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHY_0405 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHY_0051 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHY_2036 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHY_1485 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:chy03450]
D CHY_0027 KU domain protein K10979 ku; DNA end-binding protein Ku
D CHY_0025 conserved hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CHY_1797 conserved hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:chy02010]
D CHY_0375 anion ABC transporter, anion-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D CHY_0376 anion ABC transporter, permease protein K05773 tupB; tungstate transport system permease protein
D CHY_0377 anion ABC transporter, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CHY_1536 basic membrane protein family protein K07335 bmpA; basic membrane protein A and related proteins
D CHY_1534 putative sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D CHY_1533 putative sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D CHY_1535 putative sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CHY_0785 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CHY_0784 phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D CHY_0783 phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D CHY_2116 pstB; phosphate ABC transporter, ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CHY_0504 glutamine ABC transporter, glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D CHY_0505 glutamine ABC transporter, permease protein K10037 glnP; glutamine transport system permease protein
D CHY_0506 glnQ; glutamine ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CHY_2238 high affinity branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CHY_2231 livH; high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CHY_2230 livM; high affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CHY_2229 livG; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CHY_2228 livF; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CHY_2420 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CHY_2421 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D CHY_2422 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CHY_2363 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CHY_2362 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CHY_2361 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CHY_2360 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CHY_0652 ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CHY_0654 ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CHY_0756 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D CHY_1632 conserved hypothetical protein K02009 cbiN; cobalt/nickel transport protein
D CHY_1633 putative cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CHY_0755 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CHY_1631 cobalt ABC transporter, permease protein K02008 cbiQ; cobalt/nickel transport system permease protein
D CHY_0757 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D CHY_0758 cobalamin/cobalt ABC transporter, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CHY_1630 cobalt ABC transporter, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CHY_1642 bioY family protein K03523 bioY; biotin transport system substrate-specific component
D CHY_2277 cobalt ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D CHY_2279 cobalt ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CHY_2278 cobalt ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CHY_1382 putative heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D CHY_1383 putative heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D CHY_1384 sodium ABC transporter, ATP-binding protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D CHY_0168 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CHY_0167 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CHY_2442 cydC; transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D CHY_2443 cydD; transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:chy03070]
D CHY_1512 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CHY_1511 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CHY_2325 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CHY_0285 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CHY_2289 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CHY_1514 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CHY_0004 sporulation associated-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHY_0162 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHY_1442 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CHY_1434 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CHY_2570 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CHY_0865 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CHY_0870 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CHY_0863 sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:chy02020]
D CHY_2046 sensory box histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHY_2047 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CHY_0785 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CHY_0057 putative serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D CHY_0981 hag; flagellin K02406 fliC; flagellin
D CHY_1013 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CHY_0963 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D CHY_1413 DNA-binding response regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D CHY_2710 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CHY_1124 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D CHY_1978 spo0A; stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CHY_1367 C4-dicarboxylate response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D CHY_1125 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D CHY_1369 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CHY_0605 sensor histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D CHY_0975 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CHY_0072 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CHY_0712 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_0704 glnA1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_0279 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CHY_1546 [Ni/Fe] hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CHY_1545 [Ni/Fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CHY_1544 [Ni/Fe] hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D CHY_1016 cheR1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CHY_1028 cheR2; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CHY_1296 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CHY_1029 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CHY_1023 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CHY_0966 cheW1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CHY_1030 cheW2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CHY_0967 cheA1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CHY_1033 cheA2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CHY_1018 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1032 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1026 cheY1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1031 cheB2; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHY_0968 cheB1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHY_1366 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D CHY_1365 TRAP dicarboxylate transporter, DctQ subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D CHY_1364 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D CHY_0602 molybdopterin oxidoreductase, iron-sulfur binding subunit K08358 ttrB; tetrathionate reductase subunit B
D CHY_2445 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CHY_2444 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CHY_2554 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CHY_0969 flgM; negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:chy02024]
D CHY_1393 hfq; hfq protein K03666 hfq; host factor-I protein
D CHY_1587 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CHY_1586 trpG; para-aminobenzoate/anthranilate synthase glutamine amidotransferase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CHY_2238 high affinity branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CHY_2231 livH; high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CHY_2230 livM; high affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CHY_2229 livG; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CHY_2228 livF; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CHY_2411 fadD5; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1731 fadD3; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1735 fadD4; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_0437 fadD1; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_0845 fadD2; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1613 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1475 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CHY_2472 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CHY_2363 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CHY_2362 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CHY_2361 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CHY_2360 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CHY_1128 oligopeptide/dipeptide ABC transporter, peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CHY_1129 oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CHY_1130 oligopeptide/dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CHY_1126 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CHY_1127 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CHY_0004 sporulation associated-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHY_2325 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CHY_0285 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CHY_2289 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CHY_1514 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CHY_0162 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHY_1442 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CHY_1434 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CHY_1978 spo0A; stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CHY_0741 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:chy02030]
D CHY_1296 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CHY_1029 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CHY_1023 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CHY_0967 cheA1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CHY_1033 cheA2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CHY_0966 cheW1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CHY_1030 cheW2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CHY_1018 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1032 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1026 cheY1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1017 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D CHY_1031 cheB2; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHY_0968 cheB1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHY_1015 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CHY_1016 cheR1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CHY_1028 cheR2; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CHY_0994 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CHY_1019 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CHY_1020 flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CHY_1003 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CHY_0963 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D CHY_0964 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:chy02040]
D CHY_0992 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CHY_0993 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CHY_0994 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CHY_0995 flagellar protein K02411 fliH; flagellar assembly protein FliH
D CHY_0996 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CHY_0997 flagellar protein K02413 fliJ; flagellar protein FliJ
D CHY_1019 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CHY_1020 flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CHY_1003 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CHY_1004 putative flagellar protein K02418 fliO; flagellar protein FliO/FliZ
D CHY_1005 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CHY_1006 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CHY_1007 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CHY_1009 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CHY_1008 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CHY_0990 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CHY_0991 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CHY_0999 flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CHY_1001 flgG; flagellar basal-body rod protein FlgG K02390 flgE; flagellar hook protein FlgE
D CHY_1014 flagellar hook-basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CHY_0971 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D CHY_0972 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CHY_0981 hag; flagellin K02406 fliC; flagellin
D CHY_0985 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D CHY_0986 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CHY_0963 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D CHY_0964 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CHY_0969 flgM; negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CHY_0455 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CHY_0279 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CHY_1013 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CHY_0284 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CHY_0570 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:chy01501]
D CHY_2363 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CHY_2362 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CHY_2361 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CHY_2360 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CHY_1563 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHY_0345 peptidoglycan biosynthesis transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:chy01502]
D CHY_1346 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHY_0667 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CHY_2073 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CHY_2072 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CHY_2069 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:chy01503]
D CHY_2271 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHY_2569 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHY_2485 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHY_0057 putative serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:chy01000]
C 01001 Protein kinases [BR:chy01001]
D CHY_1343 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CHY_1478 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CHY_2046 sensory box histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHY_0605 sensor histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D CHY_1124 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D CHY_0657 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CHY_2219 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CHY_1856 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CHY_0967 cheA1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CHY_1033 cheA2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:chy01009]
D CHY_1440 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CHY_1143 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHY_1479 putative serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:chy01002]
D CHY_1506 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CHY_0634 pilD; type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CHY_1462 gpr; spore protease K06012 gpr; spore protease [EC:3.4.24.78]
D CHY_1543 hybD; hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D CHY_2057 putative sporulation specific protein SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D CHY_1068 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CHY_0717 putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D CHY_0674 putative cell-wall associated endopeptidase K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D CHY_1075 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CHY_2010 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CHY_0104 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CHY_1108 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CHY_1724 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CHY_1172 renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CHY_2216 peptidase, M20/M25/M40 family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CHY_0861 peptidase, M23/M37 family K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D CHY_2288 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CHY_1272 putative proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D CHY_1328 putative proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D CHY_1873 pepP; aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CHY_1818 putative aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CHY_0214 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CHY_0108 peptidase, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D CHY_0361 putative membrane-associated zinc metalloprotease K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D CHY_1777 putative membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CHY_0057 putative serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D CHY_2101 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CHY_1962 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CHY_1147 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CHY_0325 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CHY_0040 putative ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CHY_2651 conserved hypothetical protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CHY_0330 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CHY_0329 putative ATP-dependent protease La K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D CHY_1378 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CHY_1697 putative prophage LambdaCh01, repressor protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D CHY_1360 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CHY_0170 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CHY_0820 rhomboid family protein K07059 K07059; rhomboid family protein
D CHY_1979 putative stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D CHY_1791 hslV; ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D CHY_0548 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CHY_1565 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CHY_0656 putative pmbA protein K03592 pmbA; PmbA protein
D CHY_0642 tldD; tldD protein K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:chy01003]
D CHY_1041 glycosyl transferase, group 1 family K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D CHY_1043 putative glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CHY_1563 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHY_2585 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CHY_2588 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CHY_0670 otsA; alpha, alpha-trehalose-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:chy01005]
D CHY_2588 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:chy01011]
D CHY_2066 murAB; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHY_2542 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CHY_2067 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CHY_2068 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CHY_2071 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CHY_2074 murE; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CHY_1346 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CHY_0667 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CHY_0306 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CHY_2072 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CHY_2069 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CHY_1158 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHY_1850 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CHY_0409 mviN1; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CHY_0546 mviN2; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CHY_1563 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CHY_0345 peptidoglycan biosynthesis transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CHY_2075 pbpB; penicillin-binding protein 2B K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CHY_2101 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CHY_1962 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CHY_1147 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CHY_0674 putative cell-wall associated endopeptidase K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D CHY_0861 peptidase, M23/M37 family K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D CHY_1646 transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CHY_0547 conserved hypothetical protein TIGR00247 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CHY_1756 putative spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CHY_1517 putative stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CHY_2541 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CHY_0206 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CHY_2271 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHY_2569 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHY_2485 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:chy01004]
D CHY_1448 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CHY_1450 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CHY_1445 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CHY_1447 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CHY_2589 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CHY_1449 fabK; enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CHY_0501 lipase/acylhydrolase, GDSL family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CHY_0572 acetyl-coenzyme A synthetase family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0249 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0659 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CHY_0264 acetyl-CoA synthase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CHY_2411 fadD5; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1731 fadD3; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1735 fadD4; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_0437 fadD1; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_0845 fadD2; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1613 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1451 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CHY_1918 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CHY_1094 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CHY_1926 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:chy01008]
D CHY_1319 dehydrogenase, FMN-dependent family K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CHY_0269 dehydrogenase, FMN-dependent family K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:chy01006]
D CHY_1988 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CHY_1206 hepT; heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D CHY_0237 putative undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CHY_1781 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CHY_1394 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CHY_1807 putative 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:chy01007]
D CHY_2340 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CHY_1561 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHY_1947 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CHY_2338 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CHY_0124 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHY_2621 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CHY_0534 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CHY_0334 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CHY_0393 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHY_2365 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CHY_2204 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHY_2205 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CHY_0439 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CHY_0440 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CHY_2697 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CHY_1775 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CHY_1579 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CHY_0538 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CHY_1571 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CHY_1570 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CHY_1491 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CHY_1492 putative aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CHY_0115 putative aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D CHY_1086 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHY_1929 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CHY_2262 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CHY_1436 aminotransferase, class III K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D CHY_1212 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CHY_0515 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:chy00194]
D CHY_2544 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CHY_2545 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CHY_2546 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CHY_2547 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CHY_2548 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CHY_2549 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CHY_2550 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CHY_2551 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CHY_2553 putative membrane protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:chy03000]
D CHY_0078 conserved hypothetical protein K13653 K13653; AraC family transcriptional regulator
D CHY_1527 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CHY_2398 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CHY_2575 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CHY_2534 stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CHY_0441 CBS domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D CHY_0434 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CHY_1605 transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D CHY_1706 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D CHY_2099 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CHY_0651 transcription regulator, Fur family K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D CHY_1135 transcriptional regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CHY_1273 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D CHY_1835 cooA-1; carbon monoxide oxidation system transcription regulator CooA-1 K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator
D CHY_2200 rrf2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D CHY_1092 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CHY_0859 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CHY_2371 birA; BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CHY_1865 putative transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D CHY_1333 putative sigma-54-dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CHY_0788 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CHY_0619 molybdenum transport domain protein K02019 modE; molybdate transport system regulatory protein
D CHY_0378 molybdate transport repressor ModE domain protein K02019 modE; molybdate transport system regulatory protein
D CHY_0339 conserved hypothetical protein K01926 rex; redox-sensing transcriptional repressor
D CHY_1789 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D CHY_0141 putative GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D CHY_1696 prophage LambdaCh01, transcriptional regulator, PBSX family K07729 K07729; putative transcriptional regulator
D CHY_0715 helix-turn-helix protein, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CHY_0938 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CHY_2622 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CHY_0202 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D CHY_0010 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CHY_2344 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CHY_1843 glpP; glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D CHY_1981 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CHY_0412 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CHY_2351 ctsR; transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D CHY_2091 sigma-54 dependent transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D CHY_1139 mtrB; transcription attenuation protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D CHY_1503 pyrR; pyrR bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CHY_2052 conserved hypothetical protein TIGR00244 K07738 nrdR; transcriptional repressor NrdR
D CHY_2079 mraZ; mraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:chy03021]
D CHY_2281 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CHY_2318 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CHY_2317 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CHY_1487 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CHY_0455 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CHY_1709 sigZ; RNA polymerase sigma-Z factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHY_1845 putative RNA polymerase sigma-W factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHY_1868 putative RNA polymerase sigma-M factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CHY_1959 sigF; RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CHY_0617 sigK; RNA polymerase sigma-K factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CHY_2055 sigG; RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CHY_2056 sigE; RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CHY_2333 sigH; RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor
D CHY_1519 RNA polymerase sigma factor K03093 sigI; RNA polymerase sigma-I factor
D CHY_0279 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CHY_1013 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CHY_1769 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CHY_1994 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CHY_2324 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CHY_2366 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CHY_0130 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:chy03019]
D CHY_0364 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D CHY_1444 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CHY_1157 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CHY_1168 HDIG/KH domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CHY_0289 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CHY_0229 ATP-dependent RNA helicase, DEAD box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHY_0284 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHY_1758 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CHY_0130 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CHY_1143 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CHY_0415 dnaK; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D CHY_0807 chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHY_1393 hfq; hfq protein K03666 hfq; host factor-I protein
D CHY_2440 polyA polymerase/tRNA nucleotidyltransferase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CHY_0975 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CHY_0272 ATP-binding protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:chy03011]
D CHY_1925 hydroxymethylbutenyl pyrophosphate reductase/ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CHY_1787 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CHY_2303 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CHY_2282 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CHY_2292 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CHY_0035 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CHY_2314 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CHY_2295 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CHY_2273 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CHY_2310 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CHY_2283 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CHY_2315 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CHY_2284 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CHY_2296 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CHY_1760 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CHY_1433 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CHY_2300 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CHY_0037 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CHY_2305 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CHY_0406 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CHY_0421 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CHY_2322 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CHY_2306 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CHY_2309 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CHY_2308 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CHY_2297 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CHY_2294 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CHY_0039 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CHY_2321 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CHY_2323 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CHY_2320 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CHY_2274 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CHY_2299 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CHY_2290 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CHY_2302 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CHY_2280 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CHY_2293 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CHY_1428 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CHY_1576 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CHY_0367 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CHY_2304 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CHY_2307 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CHY_2298 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CHY_0368 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CHY_1469 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CHY_2301 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CHY_2291 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CHY_2565 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CHY_1453 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CHY_2326 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CHY_0001 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CHY_1577 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CHY_2285 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CHY_0195 rplY; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CHY_2316 ribosomal protein L7ae family protein K07590 RP-L7A; large subunit ribosomal protein L7A
D CHY_Ch5SB rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHY_Ch5SD rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHY_Ch5SC rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHY_Ch5SA rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHY_Ch16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch16SC rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch16SD rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHY_Ch23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHY_Ch23SD rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHY_Ch23SC rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:chy03009]
D CHY_1444 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CHY_0430 era; GTP-binding protein Era K03595 era; GTPase
D CHY_0370 obg; spo0B-associated GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D CHY_1769 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CHY_1994 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CHY_2324 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CHY_1531 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CHY_2616 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CHY_1481 sun; sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CHY_0418 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CHY_0008 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CHY_2078 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CHY_0055 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CHY_1395 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D CHY_1984 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CHY_2335 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CHY_0058 conserved hypothetical protein TIGR00246 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CHY_1437 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CHY_1480 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CHY_1112 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CHY_1938 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CHY_1505 ribosomal large subunit pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CHY_1119 ribosomal large subunit pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CHY_0724 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CHY_1431 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CHY_1164 MiaB-like tRNA modifying enzyme YliG, TIGR01125 K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CHY_0417 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CHY_0364 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D CHY_0542 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CHY_2337 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D CHY_0229 ATP-dependent RNA helicase, DEAD box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CHY_1477 GTP-binding protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CHY_1919 GTP-binding protein K03977 engA; GTPase
D CHY_1427 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
D CHY_0112 GTP-binding protein K03665 hflX; GTPase
D CHY_2561 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CHY_2223 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CHY_1765 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CHY_1770 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CHY_2708 S4 domain protein K14761 rlbA; ribosome-associated protein
D CHY_0391 iojap protein, homolog K09710 ybeB; ribosome-associated protein
D CHY_0427 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D CHY_0156 yfiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D CHY_0031 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D CHY_1454 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:chy03016]
D CHY_1949 polyA polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CHY_1775 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CHY_0534 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CHY_0393 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHY_2621 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CHY_0124 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHY_2365 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CHY_2204 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHY_0538 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CHY_1579 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CHY_2697 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CHY_2338 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CHY_0334 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CHY_2205 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CHY_1571 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CHY_1570 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CHY_1561 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHY_1947 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CHY_2222 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CHY_0420 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CHY_2276 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CHY_1763 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CHY_1627 tRNA pseudouridine synthase D family protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D CHY_2199 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHY_2561 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CHY_1394 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CHY_0006 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CHY_0007 gidA1; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CHY_2058 selD; selenide, water dikinase, selenocysteine-containing K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CHY_0002 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CHY_0314 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CHY_0451 putative 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D CHY_0439 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CHY_0440 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CHY_2340 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CHY_2682 cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CHY_1398 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CHY_0419 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CHY_1793 gidA2; glucose inhibited division protein A K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D CHY_1430 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CHY_0459 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D CHY_1122 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CHY_0054 conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CHY_1573 RNA methyltransferase, TrmH family protein K03437 spoU; RNA methyltransferase, TrmH family
D CHY_2197 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CHY_1080 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CHY_1081 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CHY_2577 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CHY_1516 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CHY_0952 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CHY_0951 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CHY_0954 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CHY_1819 conserved hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CHY_1521 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D CHY_1162 conserved hypothetical protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D CHY_1515 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CHY_0213 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CHY_0723 glycoprotease, homolog K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CHY_0725 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CHY_0722 conserved hypothetical protein TIGR00150 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CHY_2203 thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CHY_0289 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CHY_1758 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:chy03012]
D CHY_1766 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CHY_1578 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CHY_1786 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CHY_2312 tuf1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CHY_2327 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CHY_0961 fusA1; translation elongation factor G K02355 fusA; elongation factor G
D CHY_2313 fusA2; translation elongation factor G K02355 fusA; elongation factor G
D CHY_1802 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D CHY_2563 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CHY_1784 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CHY_2562 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CHY_0196 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CHY_2286 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CHY_1872 efp; translation elongation factor P K02356 efp; elongation factor P
D CHY_0163 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:chy03110]
D CHY_2348 negative regulator of genetic competence clpC/mecB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CHY_0326 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CHY_1790 hslU; heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D CHY_0415 dnaK; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D CHY_0807 chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHY_0413 thermosome, alpha subunit K22447 cct; archaeal chaperonin
D CHY_0416 chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D CHY_1470 heat shock protein HSP33 K04083 hslO; molecular chaperone Hsp33
D CHY_0414 grpE; grpE protein K03687 GRPE; molecular chaperone GrpE
D CHY_0821 hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D CHY_2419 hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D CHY_2416 hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D CHY_0806 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D CHY_0057 putative serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D CHY_0214 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CHY_2551 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CHY_1826 hypA2; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CHY_1542 hypA1; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CHY_1541 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CHY_0201 putative peptidyl-prolyl cis-trans isomerase, PpiC-type K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CHY_2202 trx2; thioredoxin K03671 TXN; thioredoxin
D CHY_2390 putative thioredoxin K03671 TXN; thioredoxin
D CHY_0553 trx1; thioredoxin K03671 TXN; thioredoxin
D CHY_0567 glutaredoxin K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:chy04131]
D CHY_0215 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CHY_0280 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHY_1144 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:chy03032]
D CHY_0852 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CHY_0205 huP; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CHY_2710 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CHY_0041 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CHY_1236 putative primosomal protein DnaI K02315 dnaC; DNA replication protein DnaC
D CHY_0454 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CHY_2640 DNA primase, internal deletion K02316 dnaG; DNA primase [EC:2.7.7.101]
D CHY_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHY_1137 dnaE2; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHY_0959 dnaE1; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHY_1772 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CHY_2709 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHY_0405 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHY_0051 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHY_2036 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHY_2675 putative DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHY_1426 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CHY_1650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHY_1100 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CHY_2213 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CHY_2704 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CHY_2705 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CHY_1794 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:chy03036]
D CHY_1444 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CHY_0205 huP; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CHY_2710 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CHY_1393 hfq; hfq protein K03666 hfq; host factor-I protein
D CHY_1443 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D CHY_1946 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CHY_1945 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CHY_2061 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CHY_0210 conserved hypothetical protein K05589 ftsB; cell division protein FtsB
D CHY_0167 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CHY_1159 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CHY_2065 cell division protein FtsQ, homolog K03589 ftsQ; cell division protein FtsQ
D CHY_2070 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CHY_0168 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CHY_2060 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CHY_2271 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHY_2569 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHY_2485 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CHY_0347 septum formation inhibitor MinC, C-terminal protein K03610 minC; septum site-determining protein MinC
D CHY_1405 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CHY_0348 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CHY_0349 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CHY_2038 cell division protein K04074 divIVA; cell division initiation protein
D CHY_2042 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D CHY_0342 mreB; cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CHY_2533 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CHY_0343 mreC; cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CHY_0344 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CHY_0358 peptidoglycan biosynthesis protein, FtsW/RodA/SpoVE family K05837 rodA; rod shape determining protein RodA
D CHY_0009 soj; sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D CHY_0010 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CHY_0007 gidA1; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CHY_0008 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CHY_1793 gidA2; glucose inhibited division protein A K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D CHY_1792 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D CHY_1964 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CHY_0843 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D CHY_2664 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D CHY_0204 tetrapyrrole methylase family protein/MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D CHY_0275 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:chy03400]
D CHY_0809 ogt; methylated-DNA-protein-cysteine methyltransferase, selenocysteine-containing K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CHY_1567 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CHY_1121 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CHY_1339 mutT; mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CHY_0300 dut; deoxyuridine 5`-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CHY_0179 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CHY_1649 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CHY_1757 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CHY_2224 recJ; single-stranded DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CHY_1100 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CHY_1650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CHY_0259 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CHY_0258 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CHY_0267 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CHY_1099 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CHY_2318 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CHY_2317 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CHY_2281 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CHY_1487 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CHY_0200 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CHY_1397 hexA; DNA mismatch repair protein HexA K03555 mutS; DNA mismatch repair protein MutS
D CHY_1564 mutS2; DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D CHY_1396 hexB; DNA mismatch repair protein HexB K03572 mutL; DNA mismatch repair protein MutL
D CHY_1990 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CHY_1989 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CHY_1137 dnaE2; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHY_0959 dnaE1; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CHY_1772 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CHY_2709 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CHY_0405 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CHY_0051 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CHY_2036 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CHY_2675 putative DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CHY_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHY_2213 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CHY_1815 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CHY_1166 recA; recA protein K03553 recA; recombination protein RecA
D CHY_1523 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CHY_1522 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CHY_1524 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CHY_1485 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CHY_0946 conserved hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D CHY_0945 Ser/Thr protein phosphatase family protein K03547 sbcD; DNA repair protein SbcD/Mre11
D CHY_2347 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CHY_2707 recF; DNA recombination/replication protein RecF K03629 recF; DNA replication and repair protein RecF
D CHY_1468 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CHY_0438 putative DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CHY_2673 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CHY_1980 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CHY_1684 recU; prophage LambdaCh01, recombination protein U K03700 recU; recombination protein U
D CHY_2186 rexA; exonuclease RexA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CHY_2187 rexB; exonuclease RexB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CHY_2152 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D CHY_0027 KU domain protein K10979 ku; DNA end-binding protein Ku
D CHY_0025 conserved hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CHY_1797 conserved hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CHY_2704 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CHY_2705 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CHY_1794 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CHY_0205 huP; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CHY_1651 dinB; DNA polymerase IV - AMBIGUITY K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CHY_1378 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CHY_1697 putative prophage LambdaCh01, repressor protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D CHY_1167 recX; regulatory protein RecX K03565 recX; regulatory protein
D CHY_1568 DNA polymerase, X family K02347 polX; DNA polymerase (family X)
D CHY_0676 nrdJ; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, intein-containing K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:chy03029]
D CHY_1766 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CHY_1578 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CHY_1786 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CHY_2312 tuf1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CHY_2327 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CHY_0961 fusA1; translation elongation factor G K02355 fusA; elongation factor G
D CHY_2313 fusA2; translation elongation factor G K02355 fusA; elongation factor G
D CHY_0600 metallo-beta-lactamase family protein K16639 LACTB2; endoribonuclease LACTB2 [EC:3.1.27.-]
D CHY_0430 era; GTP-binding protein Era K03595 era; GTPase
D CHY_1561 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CHY_0393 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CHY_2204 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CHY_0124 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CHY_1102 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CHY_1103 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CHY_1101 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CHY_0036 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CHY_0415 dnaK; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D CHY_0414 grpE; grpE protein K03687 GRPE; molecular chaperone GrpE
D CHY_0807 chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHY_0806 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D CHY_0416 chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D CHY_2199 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CHY_0004 sporulation associated-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:chy02000]
D CHY_2442 cydC; transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D CHY_2443 cydD; transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D CHY_0375 anion ABC transporter, anion-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D CHY_0376 anion ABC transporter, permease protein K05773 tupB; tungstate transport system permease protein
D CHY_0377 anion ABC transporter, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CHY_1536 basic membrane protein family protein K07335 bmpA; basic membrane protein A and related proteins
D CHY_1534 putative sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D CHY_1533 putative sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D CHY_1535 putative sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CHY_0118 ABC transporter, permease protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D CHY_0117 ABC transporter, ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D CHY_0785 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CHY_0784 phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D CHY_0783 phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D CHY_2116 pstB; phosphate ABC transporter, ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CHY_0504 glutamine ABC transporter, glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D CHY_0505 glutamine ABC transporter, permease protein K10037 glnP; glutamine transport system permease protein
D CHY_0506 glnQ; glutamine ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CHY_2238 high affinity branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CHY_2231 livH; high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CHY_2230 livM; high affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CHY_2229 livG; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CHY_2228 livF; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CHY_2420 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CHY_2421 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D CHY_2422 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CHY_2363 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CHY_2362 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CHY_2361 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CHY_2360 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CHY_1128 oligopeptide/dipeptide ABC transporter, peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CHY_1129 oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CHY_1130 oligopeptide/dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CHY_1126 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CHY_1127 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CHY_2193 iron compound ABC transporter, iron-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CHY_2192 iron compound ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CHY_2191 iron compound ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CHY_1752 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CHY_0397 iron compound ABC transporter, iron-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D CHY_0398 iron compound ABC transporter, permease protein K25027 btuC; cobalamin transport system permease protein
D CHY_0399 iron compound ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CHY_0652 ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CHY_0654 ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CHY_0756 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D CHY_1632 conserved hypothetical protein K02009 cbiN; cobalt/nickel transport protein
D CHY_1631 cobalt ABC transporter, permease protein K02008 cbiQ; cobalt/nickel transport system permease protein
D CHY_0757 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D CHY_1633 putative cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CHY_0755 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CHY_0758 cobalamin/cobalt ABC transporter, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CHY_1630 cobalt ABC transporter, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CHY_1642 bioY family protein K03523 bioY; biotin transport system substrate-specific component
D CHY_2277 cobalt ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D CHY_2279 cobalt ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CHY_2278 cobalt ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CHY_0871 ABC transporter, permease protein K25181 ybhS; drug efflux transport system permease protein
D CHY_0872 ABC transporter, ATP binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D CHY_0873 putative lipoprotein K25183 ybhG; membrane fusion protein YbhG
D CHY_1382 putative heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D CHY_1383 putative heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D CHY_1384 sodium ABC transporter, ATP-binding protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D CHY_0168 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CHY_0167 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CHY_0901 daunorubicin resistance ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CHY_2189 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CHY_2423 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CHY_2424 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHY_0448 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHY_2190 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHY_0900 daunorubicin resistance ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHY_0510 putative anion ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CHY_2184 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CHY_2239 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CHY_0090 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CHY_2096 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CHY_2093 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CHY_2095 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CHY_2185 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CHY_0089 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CHY_2240 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CHY_1592 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D CHY_2032 putative transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D CHY_0815 putative fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D CHY_2417 putative fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D CHY_1840 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D CHY_0073 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D CHY_0374 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D CHY_0033 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D CHY_0384 mgtE domain protein K06213 mgtE; magnesium transporter
D CHY_0963 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D CHY_0964 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CHY_2594 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D CHY_2103 crcB; crcB protein K06199 crcB; fluoride exporter
D CHY_2104 putative crcB protein K06199 crcB; fluoride exporter
D CHY_0565 putative mercuric transport protein, selenocysteine-containing K08363 merT; mercuric ion transport protein
D CHY_1404 spore germination protein K06296 gerKB; spore germination protein KB
D CHY_1950 putative spore germination protein K06311 yndE; spore germination protein
D CHY_2208 ZIP zinc transporter family protein K07238 TC.ZIP; zinc transporter, ZIP family
D CHY_2472 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CHY_1257 2-keto-3-deoxygluconate transporter K02526 kdgT; 2-keto-3-deoxygluconate permease
D CHY_0431 L-lactate/glycolate permease K03303 lutP; lactate permease
D CHY_2431 putative Na+/Ca+ exchanger protein K07301 yrbG; cation:H+ antiporter
D CHY_2275 sodium/calcium antiporter K07301 yrbG; cation:H+ antiporter
D CHY_2033 sodium:solute transporter K14393 actP; cation/acetate symporter
D CHY_1625 Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D CHY_1575 ktrB; potassium uptake protein KtrB K03498 trkH; trk/ktr system potassium uptake protein
D CHY_1574 ktrA; potassium uptake protein KtrA K03499 trkA; trk/ktr system potassium uptake protein
D CHY_1335 permease, cytosine/purines, uracil, thiamine, allantoin family K10974 codB; cytosine permease
D CHY_2016 uracil permease K02824 uraA; uracil permease
D CHY_0697 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CHY_1271 putative benzoate transporter K05782 benE; benzoate membrane transport protein
D CHY_0620 putative chromate transporter K07240 chrA; chromate transporter
D CHY_1628 putative manganese transpoter K03322 mntH; manganese transport protein
D CHY_1366 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D CHY_1365 TRAP dicarboxylate transporter, DctQ subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D CHY_1364 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D CHY_1093 arsenical-resistance protein K03325 ACR3; arsenite transporter
D CHY_0855 sodium/bile acid symporter family protein K03325 ACR3; arsenite transporter
D CHY_0960 spoVB; stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CHY_0409 mviN1; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CHY_0546 mviN2; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CHY_2215 putative transporter K24180 mleP; malate permease and related proteins
D CHY_0133 putative branched-chain amino acid transport protein AzlC K26605 azlC; branched chain amino acid efflux pump
D CHY_0132 putative branched-chain amino acid transport protein AzlD K26606 azlD; branched chain amino acid efflux pump
D CHY_0230 probable proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D CHY_2070 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CHY_2560 putative membrane protein K23242 mntP; manganese efflux pump family protein
D CHY_2414 iron permease, FTR1 family K07243 FTR; high-affinity iron transporter
D CHY_0286 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D CHY_1999 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CHY_0917 pccB; propionyl-CoA carboxylase, B subunit K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D CHY_0919 biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CHY_1095 thioredoxin domain selenoprotein/cytochrome C biogenesis family protein K06196 ccdA; cytochrome c-type biogenesis protein
D CHY_2082 ndrA; probable respiratory nitrate reductase alpha subunit K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D CHY_2081 molybdopterin oxidoreductase, iron-sulfur binding subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D CHY_2080 putative molybdopterin oxidoreductase, membrane subunit K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D CHY_2574 molybdopterin oxidoreductase, molybdopterin-binding subunit K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D CHY_0602 molybdopterin oxidoreductase, iron-sulfur binding subunit K08358 ttrB; tetrathionate reductase subunit B
D CHY_2108 FeoA family protein K04758 feoA; ferrous iron transport protein A
D CHY_1387 putative cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D CHY_1773 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:chy02044]
D CHY_2519 general secretion pathway domain protein K02450 gspA; general secretion pathway protein A
D CHY_0634 pilD; type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CHY_0630 pilB; type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D CHY_0632 pilC; type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D CHY_0639 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D CHY_0640 pilN; type IV pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D CHY_0641 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D CHY_0631 pilT; type IV pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D CHY_2150 general secretion pathway domain protein K12283 mshM; MSHA biogenesis protein MshM
D CHY_2040 conserved hypothetical protein K02221 yggT; YggT family protein
D CHY_0402 comEA; competence protein K02237 comEA; competence protein ComEA
D CHY_2556 putative comE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CHY_0403 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D CHY_1145 putative ComF operon protein K02241 comFB; competence protein ComFB
D CHY_1009 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CHY_1008 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CHY_0993 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CHY_0995 flagellar protein K02411 fliH; flagellar assembly protein FliH
D CHY_0996 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CHY_1020 flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CHY_1003 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CHY_1004 putative flagellar protein K02418 fliO; flagellar protein FliO/FliZ
D CHY_1005 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CHY_1006 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CHY_1007 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CHY_0162 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CHY_1512 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CHY_2325 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CHY_1511 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CHY_0285 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CHY_2289 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CHY_1434 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CHY_1442 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CHY_1514 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CHY_0004 sporulation associated-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CHY_2570 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CHY_0865 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CHY_0870 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CHY_0863 sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:chy02042]
D CHY_0741 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:chy02022]
D CHY_2046 sensory box histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CHY_2047 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CHY_1413 DNA-binding response regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D CHY_2567 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CHY_0605 sensor histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D CHY_1124 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D CHY_1978 spo0A; stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CHY_1367 C4-dicarboxylate response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D CHY_1125 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D CHY_0657 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CHY_2219 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CHY_2218 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CHY_0658 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CHY_1856 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CHY_0967 cheA1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CHY_1033 cheA2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CHY_1018 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1032 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1026 cheY1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1031 cheB2; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHY_0968 cheB1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHY_0703 response regulator/ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR
D CHY_0709 response regulator protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:chy02035]
D CHY_0967 cheA1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CHY_1033 cheA2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CHY_0966 cheW1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CHY_1030 cheW2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CHY_1017 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D CHY_1015 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CHY_1016 cheR1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CHY_1028 cheR2; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CHY_1031 cheB2; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHY_0968 cheB1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CHY_1018 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1032 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1026 cheY1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CHY_1296 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CHY_1029 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CHY_1023 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CHY_0134 signal tranducer domain protein K06595 hemAT; heam-based aerotactic trancducer
D CHY_0995 flagellar protein K02411 fliH; flagellar assembly protein FliH
D CHY_0996 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CHY_0997 flagellar protein K02413 fliJ; flagellar protein FliJ
D CHY_1004 putative flagellar protein K02418 fliO; flagellar protein FliO/FliZ
D CHY_1005 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CHY_1006 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CHY_1007 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CHY_1009 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CHY_1008 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CHY_0994 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CHY_1019 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CHY_1020 flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CHY_1003 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CHY_0993 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CHY_0992 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CHY_0990 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CHY_0991 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CHY_0999 flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CHY_1014 flagellar hook-basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CHY_1001 flgG; flagellar basal-body rod protein FlgG K02390 flgE; flagellar hook protein FlgE
D CHY_0971 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D CHY_0972 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CHY_0981 hag; flagellin K02406 fliC; flagellin
D CHY_0985 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D CHY_0986 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CHY_1013 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CHY_0963 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D CHY_0964 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CHY_0974 conserved hypothetical protein K13626 fliW; flagellar assembly factor FliW
D CHY_0969 flgM; negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CHY_0984 flaG protein K06603 flaG; flagellar protein FlaG
D CHY_1010 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D CHY_1011 putative flagellar biosynthesis protein K04562 flhG; flagellar biosynthesis protein FlhG
D CHY_0631 pilT; type IV pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D CHY_0630 pilB; type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D CHY_0632 pilC; type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D CHY_0634 pilD; type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CHY_0641 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D CHY_0640 pilN; type IV pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D CHY_0639 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:chy04812]
D CHY_2268 3,4-dihydroxyphenylacetate 2,3-dioxygenase, homolog/AMMECR1 domain protein K06990 MEMO1; MEMO1 family protein
D CHY_0342 mreB; cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CHY_2533 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CHY_2060 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CHY_2061 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CHY_0347 septum formation inhibitor MinC, C-terminal protein K03610 minC; septum site-determining protein MinC
D CHY_1405 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CHY_0348 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CHY_0349 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CHY_0009 soj; sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D CHY_0010 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:chy04147]
D CHY_0284 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CHY_0280 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CHY_0281 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CHY_1144 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CHY_1172 renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CHY_0807 chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CHY_0415 dnaK; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D CHY_0239 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CHY_1176 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CHY_2312 tuf1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CHY_2327 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CHY_0420 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CHY_2411 fadD5; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1731 fadD3; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1735 fadD4; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_0437 fadD1; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_0845 fadD2; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1613 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CHY_1355 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1288 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1604 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CHY_1440 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CHY_1340 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CHY_2027 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CHY_2259 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CHY_2260 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CHY_1839 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CHY_0712 glnA2; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_0704 glnA1; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CHY_1210 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CHY_2698 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CHY_1078 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CHY_0713 lpdA; alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CHY_1599 etfA3; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CHY_1326 etfA1; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CHY_1353 etfA2; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CHY_2477 fixB; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CHY_0282 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:chy02048]
D CHY_2152 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D CHY_2151 cas2; CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D CHY_2154 cas3; CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D CHY_2153 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D CHY_2139 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D CHY_2158 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D CHY_2157 csh1; CRISPR-associated protein, Csh1 family K19114 csh1; CRISPR-associated protein Csh1
D CHY_2156 csh2; CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2
D CHY_2155 cas5h; CRISPR-associated protein Cas5, Hmari subtype K19116 cas5h; CRISPR-associated protein Cas5h
D CHY_2144 csm1; CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D CHY_2143 csm2; CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2
D CHY_2142 csm3; CRISPR-associated RAMP protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D CHY_2141 csm4; CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D CHY_2140 csm5; CRISPR-associated RAMP protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D CHY_0832 hsdR; type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CHY_0831 putative type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CHY_0830 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CHY_2211 type II restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D CHY_2213 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CHY_1727 conserved domain protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D CHY_1700 putative prophage LambdaCh01, restriction endonuclease K07448 mrr; restriction system protein
D CHY_0716 regulatory protein, PemK family K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CHY_0715 helix-turn-helix protein, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CHY_0266 conserved hypothetical protein K07341 doc; death on curing protein
D CHY_2060 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CHY_0342 mreB; cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CHY_2533 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CHY_2199 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:chy04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:chy04090]
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:chy00537]
D CHY_1172 renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:chy03100]
D CHY_tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CHY_tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CHY_tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CHY_tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHY_tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHY_tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHY_tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CHY_tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CHY_tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CHY_tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CHY_tRNA-Cys-1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CHY_tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CHY_tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CHY_tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CHY_tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CHY_tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHY_tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHY_tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHY_tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHY_tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CHY_tRNA-His-1 tRNA-His K14226 tRNA-His; tRNA His
D CHY_tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CHY_tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHY_tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHY_tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHY_tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHY_tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CHY_tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CHY_tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CHY_tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHY_tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHY_tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D CHY_tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CHY_tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CHY_tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CHY_tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CHY_tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHY_tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHY_tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHY_tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CHY_tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHY_tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHY_tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CHY_tRNA-Trp-1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CHY_tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CHY_tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D CHY_tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D CHY_tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D CHY_tRNA-SeC-1 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CHY_Ch16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch16SC rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch16SD rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CHY_Ch23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHY_Ch23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHY_Ch23SD rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHY_Ch23SC rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CHY_Ch5SB rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHY_Ch5SD rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHY_Ch5SC rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHY_Ch5SA rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CHY_ChtmRNA1 sRNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CHY_1259 pdxA; pyridoxal phosphate biosynthetic protein PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D CHY_1708 bdhA; NADH-dependent butanol dehydrogenase A K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D CHY_2367 conserved hypothetical protein K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]
D CHY_0691 2Fe-2S iron-sulfur cluster binding domain K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CHY_0121 iorA; indolepyruvate ferredoxin oxidoreductase, IorA subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D CHY_0122 iorB; indolepyruvate ferredoxin oxidoreductase, IorB subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D CHY_2476 fixC; fixC protein K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D CHY_0786 cotJC1; cotJC protein K07217 ydbD; manganese catalase [EC:1.11.1.6]
D CHY_1830 cooL; carbon monoxide-induced hydrogenase, CooL subunit K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D CHY_0102 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CHY_1992 putative oxidoreductase, NAD-binding K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CHY_2392 grdA; glycine reductase, selenoprotein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CHY_2391 grdE; glycine reductase proprotein GrdE K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D CHY_2393 grdB; glycine reductase, selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D CHY_2395 grdD; glycine reductase complex, protein D K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CHY_2394 grdC; glycine reductase complex, protein C K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CHY_2050 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CHY_2267 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CHY_0877 putative pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CHY_0097 radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CHY_0099 putative methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D CHY_0172 acuA; acetoin utilization protein AcuA K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D CHY_0255 putative phosphinothricin N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D CHY_1134 glycosyl transferase, group 1 family K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CHY_0365 conserved hypothetical protein K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128]
D CHY_1282 conserved hypothetical protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CHY_0015 conserved hypothetical protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CHY_0564 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CHY_1258 conserved hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D CHY_1528 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CHY_0442 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D CHY_2346 putative DNA-binding protein K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D CHY_2015 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CHY_1960 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D CHY_2349 ATP:guanido phosphotransferase domain protein K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D CHY_0594 conserved hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D CHY_2386 thioesterase family protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D CHY_0212 putative stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D CHY_2481 putative phosphoesterase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CHY_2227 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CHY_0622 hydrolase, HAD subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D CHY_0426 HDIG domain protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D CHY_2620 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CHY_1644 nucH1; thermonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CHY_1699 nucH2; prophage LambdaCh01, thermonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CHY_1698 prophage LambdaCh01, nuclease domain protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CHY_1484 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CHY_1849 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CHY_1133 conserved hypothetical protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D CHY_2460 endoribonuclease L-PSP family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CHY_2559 low molecular weight protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D CHY_0665 conserved hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CHY_1281 conserved hypothetical protein TIGR00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CHY_0016 conserved hypothetical protein TIGR00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CHY_1283 conserved hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D CHY_0014 conserved hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D CHY_2479 putative L-lysine 2,3-aminomutase K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9]
D CHY_0311 putative CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CHY_0488 putative CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CHY_0848 hgdC; (R)-2-hydroxyglutaryl-CoA dehydratase activator K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CHY_0860 cation-transporting ATPase, E1-E2 family, selenocysteine-containing K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D CHY_2087 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D CHY_0173 acuB; acetoin utilization protein AcuB K04767 acuB; acetoin utilization protein AcuB
D CHY_0174 acuC; acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
D CHY_0435 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D CHY_0147 iron-sulfur cluster-binding protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D CHY_1902 conserved hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D CHY_0568 rubrerythrin K19824 fprB; rubrerythrin
D CHY_0800 fdhD; formate dehydrogenase, accessory protein FdhD K02379 fdhD; FdhD protein
D CHY_1120 ferredoxin K05337 fer; ferredoxin
D CHY_1829 cooX; carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit K12143 hyfH; hydrogenase-4 component H
D CHY_2198 putative FeS assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D CHY_0850 norV; anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D CHY_1827 cooH; carbon monoxide-induced hydrogenase, large subunit K14090 echE; ech hydrogenase subunit E
D CHY_1600 etfB3; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D CHY_1325 etfB1; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D CHY_2478 fixA; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D CHY_1352 etfB2; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D CHY_2475 fixX; iron-sulfur cluster-binding protein FixX K03855 fixX; ferredoxin like protein
D CHY_2402 dsrC; dissimilatory sulfite reductase subunit C K23077 dsrC; dissimilatory sulfite reductase related protein
D CHY_1958 conserved hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D CHY_2418 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D CHY_1529 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CHY_0686 eutJ; ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ
D CHY_2043 conserved hypothetical protein TIGR00044 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CHY_1704 conserved hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D CHY_1160 putative spore cortex-lytic enzyme K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D CHY_1218 ABC1 family protein K03688 ubiB; ubiquinone biosynthesis protein
D CHY_1237 ABC1 family protein K03688 ubiB; ubiquinone biosynthesis protein
D CHY_0868 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CHY_0155 cspC1; cold shock protein CspC K03704 cspA; cold shock protein
D CHY_0157 cspC2; cold shock protein CspC K03704 cspA; cold shock protein
D CHY_1489 conserved hypothetical protein K09777 remA; extracellular matrix regulatory protein A
D CHY_2706 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D CHY_2049 metallo-beta-lactamase family protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D CHY_2350 uvrB/uvrC motif domain protein K19411 mcsA; protein arginine kinase activator
D CHY_0324 tig; trigger factor K03545 tig; trigger factor
D CHY_0796 fdhE domain protein K02380 fdhE; FdhE protein
D CHY_0290 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CHY_1539 hypC; hydrogenase assembly chaperone hypC K04653 hypC; hydrogenase expression/formation protein HypC
D CHY_1538 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D CHY_1537 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CHY_1540 hypF; hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D CHY_0862 osmC family protein K07397 yhfA; putative redox protein
D CHY_0694 conserved hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
D CHY_2018 conserved domain protein K07402 xdhC; xanthine dehydrogenase accessory factor
D CHY_0856 nodulation efficiency family protein K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D CHY_0292 site-specific recombinase, resolvase family K07450 K07450; putative resolvase
D CHY_0341 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D CHY_2447 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC
D CHY_1414 conserved hypothetical protein K07460 yraN; putative endonuclease
D CHY_1795 putative DNA proccessing protein DprA K04096 smf; DNA processing protein
D CHY_1681 prophage LambdaCh01, terminase, small subunit K07474 xtmA; phage terminase small subunit
D CHY_1680 prophage LambdaCh01, terminase, large subunit, PBSX family K06909 xtmB; phage terminase large subunit
D CHY_2201 ATPase, AAA family K07478 ycaJ; putative ATPase
D CHY_2167 putative transposase, truncation K07485 K07485; transposase
D CHY_1291 ISChy1, transposase K07486 K07486; transposase
D CHY_1750 ISChy1, transposase K07486 K07486; transposase
D CHY_0774 ISChy1, transposase K07486 K07486; transposase
D CHY_1109 ISChy1, transposase K07486 K07486; transposase
D CHY_0598 ISChy9, transposase orfA K07491 rayT; REP-associated tyrosine transposase
D CHY_0203 conserved domain protein K07491 rayT; REP-associated tyrosine transposase
D CHY_0811 ISChy8, transposase K07496 K07496; putative transposase
D CHY_2642 ISChy3, transposase K07497 K07497; putative transposase
D CHY_1251 ISChy3, transposase K07497 K07497; putative transposase
D CHY_2518 ISChy6, transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CHY_2674 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
D CHY_2603 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CHY_2456 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D CHY_0596 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CHY_0119 osmoregulated proline transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CHY_0068 sodium transporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CHY_0075 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CHY_0060 anion transporter family protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D CHY_1834 cooC3; CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC K07321 cooC; CO dehydrogenase maturation factor
D CHY_1220 cooC1; CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC K07321 cooC; CO dehydrogenase maturation factor
D CHY_1225 cooC2; CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC K07321 cooC; CO dehydrogenase maturation factor
D CHY_2672 sigma-K processing regulatory protein BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D CHY_0005 jag; jag protein K06346 jag; spoIIIJ-associated protein
D CHY_2451 conserved hypothetical protein TIGR00370 K06351 kipI; inhibitor of KinA
D CHY_1941 spore maturation protein A K06373 spmA; spore maturation protein A
D CHY_1940 spore maturation protein B K06374 spmB; spore maturation protein B
D CHY_1961 anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D CHY_1965 putative stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D CHY_1923 putative stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D CHY_0408 putative sporulation protein K06385 spoIIP; stage II sporulation protein P
D CHY_2054 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D CHY_2007 putative sporulation protein K06390 spoIIIAA; stage III sporulation protein AA
D CHY_2006 putative sporulation protein K06391 spoIIIAB; stage III sporulation protein AB
D CHY_2005 putative sporulation protein K06392 spoIIIAC; stage III sporulation protein AC
D CHY_2004 putative sporulation protein K06393 spoIIIAD; stage III sporulation protein AD
D CHY_2003 putative sporulation protein K06394 spoIIIAE; stage III sporulation protein AE
D CHY_2002 hypothetical protein K06395 spoIIIAF; stage III sporulation protein AF
D CHY_2001 putative sporulation protein K06396 spoIIIAG; stage III sporulation protein AG
D CHY_1916 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D CHY_1957 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D CHY_1956 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D CHY_1955 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D CHY_1152 spoVFA; dipicolinate synthase, A subunit K06410 spoVFA; dipicolinate synthase subunit A
D CHY_1153 spoVFB; dipicolinate synthase, B subunit K06411 spoVFB; dipicolinate synthase subunit B
D CHY_1391 spoVK; stage V sporulation protein K K06413 spoVK; stage V sporulation protein K
D CHY_1202 spoVR; stage V sporulation protein R K06415 spoVR; stage V sporulation protein R
D CHY_1171 spoVS; stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D CHY_1464 small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D CHY_0958 small acid-soluble spore protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D CHY_2611 YabG peptidase,U57 family K06436 yabG; spore coat assemly protein
D CHY_0424 putative sporulation protein K06438 yqfD; similar to stage IV sporulation protein
D CHY_0336 gerKA; spore germination protein GerKA K06295 gerKA; spore germination protein KA
D CHY_0337 spore germination protein K06297 gerKC; spore germination protein KC
D CHY_1161 conserved hypothetical protein K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D CHY_2217 cstA; carbon starvation protein A K06200 cstA; carbon starvation protein
D CHY_1510 ACT domain protein K07166 K07166; ACT domain-containing protein
D CHY_0425 phoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CHY_1200 prkA; prkA protein K07180 prkA; serine protein kinase
D CHY_2035 CBS/cyclic nucleotide-binding domain protein K07182 K07182; CBS domain-containing protein
D CHY_0885 conserved domain protein K08482 kaiC; circadian clock protein KaiC
D CHY_1197 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D CHY_1863 putative multidrug resistance protein K01993 ABC-2.TX; HlyD family secretion protein
D CHY_2241 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CHY_0088 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CHY_1388 putative cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D CHY_0563 putative cytochrome c biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D CHY_1361 cytochrome C domain protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D CHY_2045 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D CHY_0799 putative molybdopterin biosynthesis moeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CHY_2250 putative membrane protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CHY_0056 putative osmotically inducible protein K04065 osmY; hyperosmotically inducible periplasmic protein
D CHY_0271 PHP domain protein K04477 ycdX; putative hydrolase
D CHY_0894 phospholipase family protein K07001 K07001; NTE family protein
D CHY_2088 patatin family protein K07001 K07001; NTE family protein
D CHY_0018 phosphoribosyl transferase domain protein K07100 K07100; putative phosphoribosyl transferase
D CHY_2469 lemA family protein K03744 lemA; LemA protein
D CHY_1820 dedA; dedA protein K03975 dedA; membrane-associated protein
D CHY_0511 phage infection protein K01421 yhgE; putative membrane protein
D CHY_0407 putative membrane protein K08972 K08972; putative membrane protein
D CHY_2428 conserved hypothetical protein K08982 K08982; putative membrane protein
D CHY_2429 conserved hypothetical protein K08982 K08982; putative membrane protein
D CHY_2427 conserved hypothetical protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D CHY_2627 radical SAM domain protein K06871 K06871; uncharacterized protein
D CHY_0556 radical SAM domain protein K06871 K06871; uncharacterized protein
D CHY_2468 conserved hypothetical protein K06872 K06872; uncharacterized protein
D CHY_1723 conserved hypothetical protein K06888 K06888; uncharacterized protein
D CHY_0100 ATP-binding protein K06921 K06921; uncharacterized protein
D CHY_0586 CoA-binding protein K06929 K06929; uncharacterized protein
D CHY_2384 HDIG domain protein K06950 K06950; uncharacterized protein
D CHY_1432 conserved hypothetical protein K06960 K06960; uncharacterized protein
D CHY_2334 conserved hypothetical protein K06962 K06962; uncharacterized protein
D CHY_1187 conserved domain protein K07006 K07006; uncharacterized protein
D CHY_0079 amidohydrolase family protein K07045 K07045; uncharacterized protein
D CHY_1267 hydrolase, TatD family K07051 K07051; uncharacterized protein
D CHY_2539 PIN domain protein K07063 K07063; uncharacterized protein
D CHY_1741 conserved hypothetical protein K07068 K07068; uncharacterized protein
D CHY_2536 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D CHY_2482 nucleotidyltransferase domain protein K07075 K07075; uncharacterized protein
D CHY_1118 oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein
D CHY_1097 permease family protein K07089 K07089; uncharacterized protein
D CHY_2470 putative membrane protein K07090 K07090; uncharacterized protein
D CHY_2692 putative membrane protein K07090 K07090; uncharacterized protein
D CHY_2188 putative phosphoesterase K07095 K07095; uncharacterized protein
D CHY_1471 putative phosphoesterase K07095 K07095; uncharacterized protein
D CHY_0316 putative phosphoesterase K07095 K07095; uncharacterized protein
D CHY_0029 putative membrane protein K07112 K07112; uncharacterized protein
D CHY_0626 putative membrane protein K07112 K07112; uncharacterized protein
D CHY_2576 putative membrane protein K07112 K07112; uncharacterized protein
D CHY_2578 putative membrane protein K07112 K07112; uncharacterized protein
D CHY_2671 conserved hypothetical protein K07137 K07137; uncharacterized protein
D CHY_2013 conserved hypothetical protein K07137 K07137; uncharacterized protein
D CHY_1238 iron-sulfur cluster-binding protein K07138 K07138; uncharacterized protein
D CHY_0903 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D CHY_2225 putative membrane protein K07150 K07150; uncharacterized protein
D CHY_1178 conserved hypothetical protein K07161 K07161; uncharacterized protein
D CHY_1132 CoxE-like protein K07161 K07161; uncharacterized protein
D CHY_0461 conserved hypothetical protein K07164 K07164; uncharacterized protein
D CHY_0003 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein
D CHY_1504 conserved hypothetical protein K08999 K08999; uncharacterized protein
D CHY_1266 conserved hypothetical protein K09004 K09004; uncharacterized protein
D CHY_0422 GatB/Yqey family protein K09117 K09117; uncharacterized protein
D CHY_1725 hypothetical protein K09124 K09124; uncharacterized protein
D CHY_1065 conserved hypothetical protein K09126 K09126; uncharacterized protein
D CHY_2102 conserved hypothetical protein K09137 K09137; uncharacterized protein
D CHY_0953 conserved hypothetical protein K09139 K09139; uncharacterized protein
D CHY_0498 sensory box protein K09155 K09155; uncharacterized protein
D CHY_1509 conserved hypothetical protein K09157 K09157; uncharacterized protein
D CHY_1513 HDIG domain protein, AMBIGUITY K09163 K09163; uncharacterized protein
D CHY_1336 conserved hypothetical protein K09703 K09703; uncharacterized protein
D CHY_1332 conserved hypothetical protein K09703 K09703; uncharacterized protein
D CHY_1643 conserved hypothetical protein K09706 K09706; uncharacterized protein
D CHY_1482 conserved hypothetical protein K09729 K09729; uncharacterized protein
D CHY_1021 conserved hypothetical protein K09749 K09749; uncharacterized protein
D CHY_2676 conserved hypothetical protein K09764 K09764; uncharacterized protein
D CHY_1022 conserved hypothetical protein K09766 K09766; uncharacterized protein
D CHY_2615 conserved hypothetical protein K09776 K09776; uncharacterized protein
D CHY_1201 conserved hypothetical protein K09786 K09786; uncharacterized protein
D CHY_1435 DNA-binding protein K09787 K09787; uncharacterized protein
D CHY_1392 putative N-acetylmuramoyl-L-alanine amidase K09798 K09798; uncharacterized protein
D CHY_2180 conserved domain protein K09974 K09974; uncharacterized protein
D CHY_1645 hypothetical protein K09986 K09986; uncharacterized protein
D CHY_0597 conserved hypothetical protein K07220 K07220; uncharacterized protein
D CHY_1768 conserved hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 11, 2024