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Transcription Machinery - Clostridium novyi
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
E NT01CX_0936 DNA repair helicase, truncation, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E NT01CX_1144 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E NT01CX_1107 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E NT01CX_1108 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E NT01CX_2248 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E NT01CX_0037 RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
E NT01CX_0693 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E NT01CX_1306 RNA polymerase sigma-70 factor, ECF subfamily, putative K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E NT01CX_1174 RNA polymerase sigma-70 factor, ECF subfamily, putative K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E NT01CX_2267 DNA-dependent RNA polymerase sigma subunit K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E NT01CX_2262 RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E NT01CX_2261 Specialized DNA-dependent RNA polymerase sigma subunit K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E NT01CX_1806 RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E NT01CX_1098 RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor
E NT01CX_1402 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
E NT01CX_1923 RNA polymerase sigma factor for flagellar operon fliA K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E NT01CX_2138 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E NT01CX_1978 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
E NT01CX_1102 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
E NT01CX_0096 Positive regulator of sigma(E), RseC/MucC superfamily K03803 rseC; sigma-E factor negative regulatory protein RseC
D Transcription elongation factors
E NT01CX_1045 transcription elongation factor greA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E NT01CX_0553 transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024