+D GENES KO #

  KEGG Orthology (KO) - Acetivibrio thermocellus ATCC 27405

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cth00010] D Cthe_2938 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] D Cthe_0217 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Cthe_1261 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Cthe_0347 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Cthe_0349 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Cthe_0139 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Cthe_0137 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Cthe_0138 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Cthe_1435 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Cthe_0140 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Cthe_2087 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Cthe_1292 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Cthe_0143 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Cthe_1308 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Cthe_1253 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Cthe_2392 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2796 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2393 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2797 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2390 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2794 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2391 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_2795 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_3120 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Cthe_0866 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Cthe_0865 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Cthe_1053 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Cthe_0345 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Cthe_0423 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Cthe_0551 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Cthe_1265 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Cthe_2874 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:cth00020] D Cthe_3027 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Cthe_3157 pyruvate carboxyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D Cthe_3158 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Cthe_0285 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Cthe_0866 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Cthe_0865 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Cthe_0864 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain-containing protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Cthe_0867 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Cthe_3090 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Cthe_3091 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Cthe_2874 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Cthe_2392 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2796 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2393 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2797 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2390 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2794 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2391 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_2795 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_3120 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:cth00030] D Cthe_0217 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Cthe_0576 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Cthe_2704 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Cthe_2705 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Cthe_2444 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Cthe_2443 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Cthe_2597 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Cthe_1583 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Cthe_1943 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Cthe_0677 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Cthe_1265 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Cthe_2630 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Cthe_0349 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Cthe_1261 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Cthe_0347 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:cth00040] D Cthe_2949 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D Cthe_2179 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2] D Cthe_2950 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2] D Cthe_1352 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Cthe_2183 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Cthe_0576 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Cthe_0388 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Cthe_2445 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Cthe_0319 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:cth00051] D Cthe_0821 coagulation factor 5/8 type domain protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Cthe_2811 Dockerin type 1 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Cthe_0032 Dockerin type 1 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Cthe_0389 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Cthe_3116 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Cthe_1961 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Cthe_1079 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Cthe_3113 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Cthe_0319 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Cthe_1261 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Cthe_0347 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Cthe_0388 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Cthe_2445 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Cthe_0349 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Cthe_0139 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Cthe_2597 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:cth00052] D Cthe_0186 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Cthe_2220 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Cthe_2558 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Cthe_2183 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Cthe_1265 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Cthe_2938 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] D Cthe_1956 1-phosphofructokinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144] D Cthe_1261 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Cthe_0347 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:cth00053] D Cthe_1352 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Cthe_0229 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Cthe_1361 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:cth00500] D Cthe_2183 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Cthe_1256 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Cthe_0212 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Cthe_1428 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Cthe_0825 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0536 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_1472 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0412 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0624 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0040 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0413 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0797 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2872 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0543 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2807 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0405 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2147 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0433 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0578 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0625 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0274 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0043 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0745 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2193 Carbohydrate binding family 6 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2360 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_1471 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2812 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2760 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2761 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0275 glycosyltransferase 36 K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D Cthe_2989 glycosyltransferase 36 K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D Cthe_2562 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Cthe_3166 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Cthe_3167 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Cthe_0282 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Cthe_1284 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Cthe_2191 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Cthe_0357 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Cthe_0795 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D Cthe_1787 glycoside hydrolase 15-related protein K01178 SGA1; glucoamylase [EC:3.2.1.3] D Cthe_1265 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Cthe_2938 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] D Cthe_0217 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Cthe_0389 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cth00520] D Cthe_0270 glycoside hydrolase family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D Cthe_0322 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Cthe_2190 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Cthe_0389 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Cthe_1162 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Cthe_1163 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Cthe_2629 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Cthe_2328 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Cthe_2615 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Cthe_0441 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Cthe_0112 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Cthe_2601 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Cthe_2340 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Cthe_2222 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Cthe_2229 pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D Cthe_2640 UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184] D Cthe_2641 N-acetylneuraminate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101] D Cthe_2639 acylneuraminate cytidylyltransferase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82] D Cthe_2548 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Cthe_1271 Carbohydrate binding family 6 K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55] D Cthe_2196 glycoside hydrolase family 43 K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55] D Cthe_2938 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] D Cthe_1265 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Cthe_2183 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Cthe_1352 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Cthe_0186 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Cthe_2220 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Cthe_2558 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Cthe_0229 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Cthe_1361 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Cthe_0217 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Cthe_3116 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Cthe_1961 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Cthe_1079 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D Cthe_3113 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Cthe_2221 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Cthe_2644 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Cthe_2562 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Cthe_2561 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Cthe_2559 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D Cthe_3166 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Cthe_3167 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cth00620] D Cthe_0551 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Cthe_2392 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2796 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2393 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2797 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2390 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2794 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2391 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_2795 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_3120 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Cthe_0866 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Cthe_0865 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Cthe_0505 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Cthe_0423 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Cthe_1028 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Cthe_1029 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Cthe_1053 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Cthe_0345 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Cthe_1342 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Cthe_0344 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Cthe_0701 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Cthe_0509 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Cthe_3090 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Cthe_3091 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Cthe_2874 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Cthe_1308 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Cthe_1253 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Cthe_1391 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Cthe_2519 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cth00630] D Cthe_0551 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Cthe_3027 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Cthe_3158 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Cthe_1191 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Cthe_0261 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Cthe_0196 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0202 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0863 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_1539 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_1058 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Cthe_1592 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Cthe_3003 hydrogenase, Fe-only K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] C 00640 Propanoate metabolism [PATH:cth00640] D Cthe_0551 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Cthe_1028 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Cthe_1029 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Cthe_2392 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2796 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2393 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2797 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2390 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2794 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2391 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_2795 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_0505 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Cthe_1053 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Cthe_0345 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Cthe_0095 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:cth00650] D Cthe_0423 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Cthe_0509 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Cthe_0700 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Cthe_1290 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Cthe_0505 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Cthe_2392 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2796 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2393 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2797 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2390 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2794 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2391 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_2795 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_3120 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Cthe_0866 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Cthe_0865 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Cthe_2714 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Cthe_2516 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Cthe_2517 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:cth00660] D Cthe_2714 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Cthe_2516 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Cthe_2517 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Cthe_2211 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Cthe_2210 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Cthe_2209 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cth00562] D Cthe_3193 phospholipase C zinc-binding protein K01114 plc; phospholipase C [EC:3.1.4.3] D Cthe_0139 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cth00190] D Cthe_0428 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Cthe_0429 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Cthe_0430 hydrogenase, Fe-only K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Cthe_0560 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Cthe_2606 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Cthe_2608 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Cthe_2607 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Cthe_2605 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Cthe_2609 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Cthe_2602 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Cthe_2604 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Cthe_2603 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Cthe_2267 H+transporting two-sector ATPase alpha/beta subunit central region K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Cthe_2268 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Cthe_2265 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Cthe_2269 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Cthe_2264 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Cthe_2266 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Cthe_2261 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Cthe_2262 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Cthe_2263 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cth00680] D Cthe_3003 hydrogenase, Fe-only K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Cthe_2801 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Cthe_0199 iron-sulfur cluster-binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Cthe_1058 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Cthe_0143 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Cthe_0349 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Cthe_1261 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Cthe_0347 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Cthe_1028 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Cthe_1029 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Cthe_0551 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Cthe_2392 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2796 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2393 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2797 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2390 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2794 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2391 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_2795 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_1253 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Cthe_1435 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Cthe_0140 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Cthe_2087 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Cthe_1292 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Cthe_3035 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Cthe_0295 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Cthe_0707 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Cthe_2784 cobalamin B12-binding domain protein K16179 mtbC; dimethylamine corrinoid protein C 00910 Nitrogen metabolism [PATH:cth00910] D Cthe_1565 oxidoreductase/nitrogenase component 1 K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Cthe_1566 oxidoreductase/nitrogenase component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Cthe_1573 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Cthe_0036 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Cthe_0374 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Cthe_0196 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0202 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0863 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_1539 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0372 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:cth00920] D Cthe_2531 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Cthe_2532 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Cthe_2533 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Cthe_2534 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Cthe_1570 extracellular solute-binding protein family 3 K15553 ssuA; sulfonate transport system substrate-binding protein D Cthe_1571 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Cthe_1572 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Cthe_2537 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Cthe_2536 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Cthe_0989 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Cthe_2535 adenylylsulfate reductase, thioredoxin dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Cthe_2541 nitrite and sulphite reductase 4Fe-4S region K00385 asrC; anaerobic sulfite reductase subunit C D Cthe_2066 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Cthe_1560 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Cthe_1840 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Cthe_1845 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Cthe_2799 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cth00061] D Cthe_0933 acyl carrier protein K02078 acpP; acyl carrier protein D Cthe_0131 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D Cthe_2227 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D Cthe_0935 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Cthe_0130 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Cthe_0936 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Cthe_0132 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Cthe_0932 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Cthe_0934 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Cthe_2625 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Cthe_3169 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Cthe_1232 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_0133 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_3124 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cth00071] D Cthe_1232 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_0133 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_3124 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_0423 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cth00561] D Cthe_1592 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Cthe_2442 Carbohydrate kinase, FGGY-like protein K00864 glpK; glycerol kinase [EC:2.7.1.30] D Cthe_0937 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Cthe_1023 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Cthe_0713 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Cthe_1523 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Cthe_2338 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Cthe_2414 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Cthe_3177 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Cthe_0062 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Cthe_0174 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] C 00564 Glycerophospholipid metabolism [PATH:cth00564] D Cthe_1022 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Cthe_1023 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Cthe_0713 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Cthe_3193 phospholipase C zinc-binding protein K01114 plc; phospholipase C [EC:3.1.4.3] D Cthe_1000 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Cthe_0941 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Cthe_1396 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Cthe_1259 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism D Cthe_3193 phospholipase C zinc-binding protein K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cth00230] D Cthe_0674 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Cthe_0677 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Cthe_1265 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Cthe_2630 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Cthe_1249 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Cthe_1245 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Cthe_1247 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Cthe_0554 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Cthe_1981 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Cthe_2836 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Cthe_2846 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Cthe_3054 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Cthe_1248 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Cthe_1250 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Cthe_2885 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Cthe_0741 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Cthe_1246 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Cthe_1345 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Cthe_1201 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Cthe_1575 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Cthe_0911 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Cthe_2254 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Cthe_0681 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Cthe_0716 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Cthe_0189 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Cthe_0375 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Cthe_2515 CMP/dCMP deaminase zinc-binding protein K01487 guaD; guanine deaminase [EC:3.5.4.3] D Cthe_1315 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Cthe_0053 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Cthe_0646 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Cthe_0897 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Cthe_2141 metal-dependent phosphohydrolase HD sub domain-containing protein K01129 dgt; dGTPase [EC:3.1.5.1] D Cthe_2359 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Cthe_1344 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Cthe_2578 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Cthe_2577 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Cthe_3093 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Cthe_1090 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Cthe_2924 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Cthe_2656 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Cthe_2537 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Cthe_2536 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Cthe_1816 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Cthe_1817 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Cthe_1818 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:cth00240] D Cthe_0949 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Cthe_1868 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Cthe_0950 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Cthe_1867 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Cthe_0953 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Cthe_0952 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Cthe_0947 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Cthe_0948 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Cthe_0951 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Cthe_1004 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Cthe_0716 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Cthe_2656 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Cthe_0087 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Cthe_1923 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Cthe_0712 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Cthe_0332 TGS domain-containing protein K00876 udk; uridine kinase [EC:2.7.1.48] D Cthe_2598 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Cthe_0954 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Cthe_1090 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Cthe_0678 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Cthe_1068 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Cthe_1582 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Cthe_0646 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Cthe_1477 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Cthe_0053 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Cthe_2359 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Cthe_2599 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Cthe_2107 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Cthe_2085 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Cthe_1227 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cth00250] D Cthe_0755 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Cthe_0580 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Cthe_2355 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Cthe_0069 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Cthe_0556 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Cthe_0179 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Cthe_0178 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Cthe_3093 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Cthe_0741 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Cthe_0953 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Cthe_0372 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Cthe_0374 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Cthe_0196 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0202 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0863 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_1539 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0949 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Cthe_1868 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Cthe_0950 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Cthe_1867 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Cthe_1162 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Cthe_1249 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cth00260] D Cthe_1375 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Cthe_0961 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Cthe_1376 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Cthe_0290 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Cthe_1381 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Cthe_1058 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Cthe_1592 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Cthe_1435 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Cthe_0140 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Cthe_2087 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Cthe_1292 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Cthe_3035 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Cthe_0295 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Cthe_0707 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Cthe_1959 Methyltransferase type 11 K18896 gsmt; glycine/sarcosine N-methyltransferase [EC:2.1.1.156] D Cthe_1411 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Cthe_1412 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Cthe_1211 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cth00270] D Cthe_2066 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Cthe_1560 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Cthe_1840 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Cthe_1559 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Cthe_2800 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Cthe_0645 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Cthe_2251 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Cthe_0715 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Cthe_0694 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Cthe_0622 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Cthe_0911 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Cthe_1199 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Cthe_0621 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Cthe_1728 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_1749 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_2320 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_1200 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Cthe_1375 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Cthe_0961 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Cthe_1376 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Cthe_0290 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Cthe_1845 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Cthe_2799 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Cthe_1569 Cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Cthe_1842 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Cthe_0856 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Cthe_0755 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Cthe_0580 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Cthe_1053 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Cthe_0345 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Cthe_3035 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Cthe_0295 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:cth00280] D Cthe_0856 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cth00290] D Cthe_2211 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Cthe_2210 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Cthe_2209 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Cthe_2714 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Cthe_2516 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Cthe_2517 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Cthe_2518 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Cthe_2713 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Cthe_0856 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Cthe_1391 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Cthe_2519 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cth00300] D Cthe_1376 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Cthe_0290 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Cthe_1375 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Cthe_0961 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Cthe_0962 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Cthe_0963 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Cthe_1170 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Cthe_1866 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Cthe_3100 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Cthe_3101 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Cthe_0683 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Cthe_0922 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D Cthe_2568 hypothetical protein K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] D Cthe_0978 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Cthe_0977 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:cth00220] D Cthe_1869 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Cthe_0179 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Cthe_0178 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Cthe_1816 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Cthe_1817 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Cthe_1818 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Cthe_0196 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0202 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0863 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_1539 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0374 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Cthe_0755 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Cthe_0580 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Cthe_0081 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Cthe_1864 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Cthe_1863 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Cthe_1866 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Cthe_2568 hypothetical protein K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00330 Arginine and proline metabolism [PATH:cth00330] D Cthe_1918 Orn/Lys/Arg decarboxylase major region K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Cthe_0695 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Cthe_0694 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Cthe_0715 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Cthe_0672 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Cthe_1766 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Cthe_0262 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Cthe_0755 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Cthe_0580 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:cth00340] D Cthe_2881 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Cthe_2880 histidyl-tRNA synthetase 2 K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Cthe_2889 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Cthe_2887 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Cthe_2886 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Cthe_2888 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Cthe_2884 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Cthe_2883 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Cthe_0610 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Cthe_0724 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Cthe_2882 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Cthe_3028 Pyridoxal-dependent decarboxylase K01590 hdc; histidine decarboxylase [EC:4.1.1.22] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:cth00350] D Cthe_0755 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Cthe_0580 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Cthe_2883 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Cthe_0610 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Cthe_0423 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:cth00360] D Cthe_2792 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Cthe_0615 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Cthe_0755 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Cthe_0580 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Cthe_2883 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Cthe_0610 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:cth00380] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cth00400] D Cthe_1795 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Cthe_0880 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Cthe_0786 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Cthe_0849 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Cthe_2437 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Cthe_0731 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Cthe_3086 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Cthe_1797 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Cthe_0732 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Cthe_0875 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Cthe_0874 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Cthe_0873 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Cthe_0871 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Cthe_0872 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Cthe_1411 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Cthe_1412 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Cthe_1211 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Cthe_0711 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D Cthe_1377 amino acid-binding ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D Cthe_1796 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Cthe_2260 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Cthe_0755 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Cthe_0580 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Cthe_2883 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Cthe_0610 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cth00410] D Cthe_0900 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Cthe_0901 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:cth00430] D Cthe_1029 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Cthe_1028 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:cth00450] D Cthe_2799 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Cthe_1559 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Cthe_2800 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Cthe_0645 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Cthe_1946 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Cthe_1945 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Cthe_2537 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Cthe_2536 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Cthe_2096 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cth00460] D Cthe_1256 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Cthe_0212 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Cthe_1428 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Cthe_0069 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Cthe_1058 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cth00470] D Cthe_2697 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Cthe_1938 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Cthe_2647 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Cthe_1937 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Cthe_1041 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Cthe_3100 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Cthe_0683 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:cth00480] D Cthe_3149 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Cthe_0285 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Cthe_0694 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:cth00515] D Cthe_3095 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:cth00514] D Cthe_3095 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:cth00542] D Cthe_2600 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cth00541] D Cthe_2183 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Cthe_0186 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Cthe_2220 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Cthe_2558 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Cthe_1352 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Cthe_0229 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Cthe_1361 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Cthe_1086 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Cthe_2560 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Cthe_1366 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Cthe_2562 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Cthe_2561 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Cthe_2559 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D Cthe_3116 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Cthe_2221 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Cthe_2644 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Cthe_2629 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Cthe_2601 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Cthe_2222 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Cthe_2229 pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D Cthe_2340 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:cth00550] D Cthe_2328 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Cthe_2615 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Cthe_0441 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Cthe_0112 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Cthe_2626 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Cthe_1041 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Cthe_0978 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Cthe_1938 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Cthe_2647 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Cthe_0977 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Cthe_1001 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Cthe_2305 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Cthe_0976 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Cthe_0974 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Cthe_1760 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Cthe_0091 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Cthe_1011 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Cthe_0979 penicillin-binding protein transpeptidase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Cthe_3047 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A D Cthe_3179 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_0272 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_0679 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_1171 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_1231 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_1899 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Cthe_0440 domain of unknown function DUF1727 K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D Cthe_0439 CobB/CobQ domain protein glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:cth00552] D Cthe_2305 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Cthe_2600 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Cthe_2701 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Cthe_3102 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Cthe_0727 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Cthe_0861 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Cthe_2414 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Cthe_3177 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Cthe_0062 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Cthe_0174 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D Cthe_1523 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Cthe_2338 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cth00543] D Cthe_2600 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Cthe_3114 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF D Cthe_2066 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cth00730] D Cthe_0602 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Cthe_0600 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D Cthe_1064 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cthe_0720 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cthe_1063 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Cthe_0654 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Cthe_0599 thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Cthe_0828 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Cthe_0598 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10] D Cthe_0601 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Cthe_1516 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Cthe_0575 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Cthe_0577 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Cthe_2924 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cth00740] D Cthe_0106 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Cthe_0104 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Cthe_0107 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Cthe_0105 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Cthe_0987 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Cthe_0674 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:cth00750] D Cthe_2635 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Cthe_0295 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Cthe_1381 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:cth00760] D Cthe_2355 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Cthe_2356 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Cthe_2354 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Cthe_1177 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Cthe_1201 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Cthe_1575 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Cthe_2778 cytidyltransferase-related domain protein K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D Cthe_1241 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Cthe_2656 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Cthe_0325 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Cthe_0067 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Cthe_0816 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:cth00770] D Cthe_2714 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Cthe_2516 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Cthe_2517 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Cthe_2518 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Cthe_2713 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Cthe_0902 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Cthe_0901 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Cthe_2588 transcriptional activator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Cthe_1313 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Cthe_2656 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Cthe_1276 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Cthe_0885 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Cthe_0737 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Cthe_0136 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Cthe_0856 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Cthe_0900 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:cth00780] D Cthe_0024 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Cthe_0932 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Cthe_0934 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Cthe_2625 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Cthe_3169 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Cthe_0023 Carboxylesterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Cthe_0022 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Cthe_0025 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Cthe_0021 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Cthe_1839 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] D Cthe_0020 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Cthe_2585 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:cth00790] D Cthe_2203 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Cthe_2582 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Cthe_2583 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Cthe_2581 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Cthe_1226 dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Cthe_1384 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Cthe_0106 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Cthe_3106 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Cthe_3107 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Cthe_3105 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] C 00670 One carbon pool by folate [PATH:cth00670] D Cthe_1226 dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Cthe_2399 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Cthe_1093 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Cthe_1058 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Cthe_1247 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Cthe_1246 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Cthe_0568 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Cthe_2224 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Cthe_0645 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Cthe_1227 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Cthe_0099 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Cthe_1295 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cth00860] D Cthe_2525 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Cthe_2530 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Cthe_2529 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Cthe_2527 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Cthe_2785 methyltransferase MtaA/CmuA family K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Cthe_2528 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D Cthe_2526 precorrin-6X reductase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Cthe_0965 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Cthe_3150 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Cthe_3151 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Cthe_3152 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Cthe_1297 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Cthe_3153 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Cthe_3040 Protein of unknown function DUF2383 K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis D Cthe_3041 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cth00900] D Cthe_0828 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Cthe_0999 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Cthe_2941 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Cthe_2403 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Cthe_2946 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Cthe_0997 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Cthe_0714 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Cthe_0831 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Cthe_1001 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Cthe_2704 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Cthe_2705 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Cthe_2444 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Cthe_2443 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cth00523] D Cthe_1086 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Cthe_2560 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Cthe_1366 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D Cthe_1086 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:cth00946] D Cthe_1256 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Cthe_0212 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Cthe_1428 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:cth00311] D Cthe_3063 Cephalosporin-C deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41] D Cthe_1169 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:cth00332] D Cthe_1766 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Cthe_0262 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cth00261] D Cthe_2537 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Cthe_2536 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Cthe_1375 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Cthe_0961 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Cthe_0962 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Cthe_0963 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Cthe_1170 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cth00521] D Cthe_2938 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] D Cthe_1265 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Cthe_1086 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Cthe_2560 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Cthe_1366 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Cthe_2938 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D Cthe_1086 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cth00401] D Cthe_1796 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Cthe_0755 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Cthe_0580 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Cthe_2883 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Cthe_0610 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Cthe_0875 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Cthe_0874 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Cthe_0935 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Cthe_0934 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Cthe_3169 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Cthe_0933 acyl carrier protein K02078 acpP; acyl carrier protein D Cthe_0131 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D Cthe_2227 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:cth00999] D Cthe_2251 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Cthe_1256 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Cthe_0212 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Cthe_1428 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cth00362] D Cthe_0652 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Cthe_0509 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Cthe_0700 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Cthe_1290 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:cth00625] D Cthe_0423 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Cthe_2238 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Cthe_1566 oxidoreductase/nitrogenase component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Cthe_1573 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Cthe_1565 oxidoreductase/nitrogenase component 1 K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D Cthe_0652 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:cth00633] D Cthe_2801 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Cthe_0199 iron-sulfur cluster-binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Cthe_2392 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2796 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Cthe_2393 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2797 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Cthe_2390 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2794 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Cthe_2391 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Cthe_2795 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation D Cthe_1816 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Cthe_1817 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Cthe_1818 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D Cthe_0652 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:cth00626] D Cthe_0423 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cth03020] D Cthe_2724 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Cthe_2725 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Cthe_2932 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Cthe_1314 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D Cthe_0289 helicase c2 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cth03010] D Cthe_0714 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Cthe_1006 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Cthe_2909 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Cthe_2931 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Cthe_2920 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Cthe_2187 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Cthe_2728 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Cthe_2917 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Cthe_1782 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Cthe_2902 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Cthe_2930 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Cthe_2727 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Cthe_2929 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Cthe_2916 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Cthe_0417 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Cthe_0769 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Cthe_2912 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Cthe_2185 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Cthe_2907 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Cthe_1039 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Cthe_1348 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Cthe_2721 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Cthe_2906 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Cthe_2903 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Cthe_2904 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Cthe_2915 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Cthe_2918 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Cthe_2723 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Cthe_2257 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Cthe_2722 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Cthe_2720 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Cthe_1783 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Cthe_2913 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Cthe_2922 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Cthe_2910 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Cthe_2933 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Cthe_2919 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Cthe_0765 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Cthe_1223 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Cthe_0160 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Cthe_2908 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Cthe_2905 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Cthe_2914 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Cthe_1298 Ribosomal protein L25-like protein K02897 RP-L25; large subunit ribosomal protein L25 D Cthe_0162 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Cthe_1279 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Cthe_2911 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Cthe_2921 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Cthe_2172 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Cthe_1026 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Cthe_2370 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Cthe_1224 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Cthe_2928 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Cthe_2726 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A D Cthe_2926 hypothetical protein K02875 RP-L14e; large subunit ribosomal protein L14e D Cthe_R0054 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0066 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0058 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0039 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Cthe_R0059 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Cthe_R0056 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Cthe_R0068 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Cthe_R0038 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Cthe_R0069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Cthe_R0060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Cthe_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cth00970] D Cthe_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Cthe_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Cthe_R0067 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Cthe_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Cthe_R0052 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Cthe_R0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Cthe_R0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Cthe_R0017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Cthe_R0070 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Cthe_R0029 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Cthe_R0063 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Cthe_R0026 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Cthe_R0007 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Cthe_R0024 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Cthe_R0050 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Cthe_R0062 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Cthe_R0012 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Cthe_R0001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Cthe_R0027 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Cthe_R0002 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Cthe_R0003 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Cthe_R0032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Cthe_R0006 tRNA-His K14226 tRNA-His; tRNA His D Cthe_R0055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Cthe_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Cthe_R0010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Cthe_R0005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Cthe_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Cthe_R0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Cthe_R0008 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Cthe_R0061 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Cthe_R0009 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Cthe_R0049 tRNA-Met K14230 tRNA-Met; tRNA Met D Cthe_R0016 tRNA-Met K14230 tRNA-Met; tRNA Met D Cthe_R0019 tRNA-Met K14230 tRNA-Met; tRNA Met D Cthe_R0048 tRNA-Met K14230 tRNA-Met; tRNA Met D Cthe_R0020 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Cthe_R0028 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Cthe_R0036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Cthe_R0025 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Cthe_R0013 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Cthe_R0046 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Cthe_R0043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Cthe_R0042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Cthe_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Cthe_R0031 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Cthe_R0034 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Cthe_R0064 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Cthe_R0023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Cthe_R0014 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Cthe_R0021 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Cthe_R0065 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Cthe_R0071 tRNA-Val K14237 tRNA-Val; tRNA Val D Cthe_R0035 tRNA-Val K14237 tRNA-Val; tRNA Val D Cthe_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val D Cthe_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val D Cthe_0648 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Cthe_1032 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Cthe_1541 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Cthe_1031 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Cthe_1540 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Cthe_1033 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Cthe_1542 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Cthe_0917 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Cthe_3200 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Cthe_1331 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Cthe_1543 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Cthe_0070 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Cthe_1312 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Cthe_1228 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Cthe_2381 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Cthe_2065 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Cthe_2096 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Cthe_0568 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Cthe_2224 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Cthe_0324 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Cthe_1237 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Cthe_0787 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Cthe_2815 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Cthe_1935 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Cthe_2947 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Cthe_1332 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Cthe_0214 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Cthe_0215 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Cthe_0723 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Cthe_0686 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cth03060] D Cthe_2923 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Cthe_2718 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Cthe_0144 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Cthe_0904 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Cthe_0903 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Cthe_0957 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Cthe_2367 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Cthe_1385 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Cthe_0770 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Cthe_R0033 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Cthe_0926 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Cthe_0764 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Cthe_1330 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Cthe_2079 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Cthe_0350 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Cthe_0909 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cth04122] D Cthe_1064 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cthe_0720 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cthe_0722 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Cthe_2539 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Cthe_1063 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Cthe_2538 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Cthe_0597 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Cthe_0600 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D Cthe_2540 Mov34/MPN/PAD-1 family protein K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6] C 03050 Proteasome C 03018 RNA degradation [PATH:cth03018] D Cthe_0143 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Cthe_0418 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Cthe_0146 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Cthe_2174 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Cthe_1091 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Cthe_1302 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D Cthe_1261 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Cthe_1322 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Cthe_2892 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Cthe_0774 RNA chaperone Hfq K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:cth03030] D Cthe_1264 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Cthe_0996 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Cthe_2144 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Cthe_2105 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Cthe_1040 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Cthe_2372 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Cthe_2256 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Cthe_0896 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Cthe_1156 DNA primase catalytic core domain-containing protein K02316 dnaG; DNA primase [EC:2.7.7.101] D Cthe_1350 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_2186 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_0673 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Cthe_0761 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Cthe_0886 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Cthe_1035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cth03410] D Cthe_2068 DNA-(apurinic or apyrimidinic site) lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Cthe_1283 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Cthe_3109 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Cthe_3108 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Cthe_0458 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Cthe_0886 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Cthe_1346 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Cthe_0208 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Cthe_1035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cth03420] D Cthe_2632 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Cthe_0311 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Cthe_0309 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Cthe_2737 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Cthe_0206 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Cthe_2876 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Cthe_0968 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Cthe_0886 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Cthe_1035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Cthe_0289 helicase c2 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:cth03430] D Cthe_0777 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Cthe_1014 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Cthe_0776 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Cthe_0206 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Cthe_2876 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Cthe_0968 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Cthe_0833 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Cthe_0832 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Cthe_1346 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Cthe_0208 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Cthe_1350 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_2186 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_1264 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Cthe_0996 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Cthe_2372 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Cthe_2144 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Cthe_1040 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Cthe_2105 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Cthe_1035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Cthe_2470 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Cthe_1513 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:cth03440] D Cthe_1346 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Cthe_0208 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Cthe_1350 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_2186 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_2374 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Cthe_1066 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Cthe_2142 recombination protein RecR K06187 recR; recombination protein RecR D Cthe_1050 recA protein K03553 recA; recombination protein RecA D Cthe_0886 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Cthe_0181 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Cthe_0182 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Cthe_0180 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Cthe_1278 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Cthe_2890 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Cthe_2249 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Cthe_3190 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Cthe_1264 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Cthe_0996 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Cthe_2372 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Cthe_2144 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Cthe_1040 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Cthe_2105 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Cthe_0566 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cth02010] D Cthe_2531 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Cthe_2532 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Cthe_2533 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Cthe_2534 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Cthe_1570 extracellular solute-binding protein family 3 K15553 ssuA; sulfonate transport system substrate-binding protein D Cthe_1571 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Cthe_1572 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Cthe_1588 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Cthe_1586 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Cthe_1587 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Cthe_0747 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Cthe_0748 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Cthe_0749 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Cthe_0750 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Cthe_1862 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Cthe_1576 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Cthe_1580 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Cthe_1581 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Cthe_1579 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein D Cthe_0393 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Cthe_2446 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D Cthe_0392 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Cthe_2448 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Cthe_0391 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Cthe_2447 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Cthe_0395 RbsD or FucU transport K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D Cthe_1605 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein D Cthe_1604 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Cthe_1603 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Cthe_1602 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Cthe_2278 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D Cthe_2279 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Cthe_2280 ABC transporter related protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Cthe_1555 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Cthe_1556 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Cthe_1557 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein D Cthe_1823 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein D Cthe_1822 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein D Cthe_1821 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein D Cthe_1820 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D Cthe_1819 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D Cthe_2961 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Cthe_2965 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Cthe_2964 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Cthe_2963 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Cthe_2962 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Cthe_0547 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Cthe_0549 ABC-3 protein K09816 znuB; zinc transport system permease protein D Cthe_0548 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Cthe_1803 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Cthe_1802 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Cthe_1801 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Cthe_0061 BioY protein K03523 bioY; biotin transport system substrate-specific component D Cthe_2937 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Cthe_2934 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Cthe_2936 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Cthe_2943 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Cthe_2942 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Cthe_1525 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein D Cthe_1526 ABC transporter related protein K11631 bceA; bacitracin transport system ATP-binding protein D Cthe_1859 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Cthe_1860 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Cthe_1501 ABC transporter transmembrane region K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_0396 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_3147 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_3148 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_1500 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_0397 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_0534 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Cthe_2270 ABC transporter related protein K18231 msr; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:cth02060] D Cthe_2736 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Cthe_0117 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Cthe_2735 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Cthe_0149 HPrNtr domain-containing protein K02784 ptsH; phosphocarrier protein HPr C 03070 Bacterial secretion system [PATH:cth03070] D Cthe_0904 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Cthe_0903 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Cthe_2718 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Cthe_0144 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Cthe_2923 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Cthe_0957 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Cthe_2367 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Cthe_1385 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Cthe_0926 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Cthe_0770 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:cth02020] D Cthe_1393 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Cthe_1599 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Cthe_1394 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Cthe_1600 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Cthe_1605 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein D Cthe_1409 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Cthe_1286 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Cthe_0260 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Cthe_1446 TIR protein K04771 degP; serine protease Do [EC:3.4.21.107] D Cthe_2236 flagellin domain protein K02406 fliC; flagellin D Cthe_2237 flagellin domain protein K02406 fliC; flagellin D Cthe_2425 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Cthe_2332 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Cthe_2333 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Cthe_2371 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Cthe_1526 ABC transporter related protein K11631 bceA; bacitracin transport system ATP-binding protein D Cthe_1525 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein D Cthe_1527 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Cthe_1528 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Cthe_0800 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Cthe_1899 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Cthe_0812 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Cthe_3087 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Cthe_0344 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Cthe_2942 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Cthe_2943 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Cthe_1310 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Cthe_2358 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Cthe_3383 putative autoinducer prepeptide K07800 agrD; AgrD protein D Cthe_1311 signal transduction histidine kinase regulating citrate/malate metabolism K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Cthe_2239 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Cthe_1268 DegS sensor signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Cthe_1339 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Cthe_0629 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Cthe_1338 Type II secretion system F domain-containing protein K12510 tadB; tight adherence protein B D Cthe_1337 Type II secretion system F domain-containing protein K12511 tadC; tight adherence protein C D Cthe_0196 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0202 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0863 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_1539 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_1103 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Cthe_1104 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Cthe_0288 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_0717 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_0808 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_2282 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_2820 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_2819 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_3156 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_2663 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_0039 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_0298 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_1498 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_3030 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Cthe_3036 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_0878 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0809 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_2285 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_2817 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0491 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_3029 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0080 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0038 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0810 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_0490 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_2284 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_2818 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_0805 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0479 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0811 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_1318 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0167 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_1380 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0489 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_0807 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_2821 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_2281 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_1585 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Cthe_1824 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Cthe_1584 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Cthe_3164 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Cthe_2601 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Cthe_2949 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D Cthe_0825 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0536 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_1472 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0412 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0624 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0040 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0413 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0797 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2872 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0543 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2807 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0405 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2147 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0433 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0578 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0625 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0274 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0043 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_0745 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2193 Carbohydrate binding family 6 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2360 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_1471 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2812 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2760 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2761 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Cthe_2246 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cth02024] D Cthe_0774 RNA chaperone Hfq K03666 hfq; host factor-I protein D Cthe_0875 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Cthe_0874 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Cthe_1905 glycosyl transferase family 28 K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D Cthe_1906 glycosyl transferase family 28 K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D Cthe_2179 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2] D Cthe_2950 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2] D Cthe_3077 cellulosome anchoring protein cohesin region K20276 bapA; large repetitive protein D Cthe_1232 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_0133 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_3124 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_0821 coagulation factor 5/8 type domain protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Cthe_2811 Dockerin type 1 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Cthe_0032 Dockerin type 1 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Cthe_0104 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Cthe_3383 putative autoinducer prepeptide K07800 agrD; AgrD protein D Cthe_1310 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Cthe_2358 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Cthe_1311 signal transduction histidine kinase regulating citrate/malate metabolism K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Cthe_0800 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Cthe_2961 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Cthe_2965 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Cthe_2964 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Cthe_2963 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Cthe_2962 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Cthe_0534 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Cthe_0910 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Cthe_2367 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Cthe_2718 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Cthe_0144 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Cthe_2923 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Cthe_0957 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Cthe_1385 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Cthe_0926 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Cthe_0770 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Cthe_0812 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Cthe_3087 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Cthe_3193 phospholipase C zinc-binding protein K01114 plc; phospholipase C [EC:3.1.4.3] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:cth02030] D Cthe_2819 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_3156 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_2663 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_0039 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_0298 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_1498 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_3030 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Cthe_3036 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_0393 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Cthe_2446 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D Cthe_0810 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_0490 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_2284 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_2818 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_0878 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0809 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_2285 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_2817 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0491 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_3029 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0080 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0038 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0805 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0479 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0811 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_1318 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0167 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_1380 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0492 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Cthe_2308 CheC domain protein K03409 cheX; chemotaxis protein CheX D Cthe_2406 hypothetical protein K03409 cheX; chemotaxis protein CheX D Cthe_0126 CheC domain protein K03409 cheX; chemotaxis protein CheX D Cthe_1176 CheC domain protein K03409 cheX; chemotaxis protein CheX D Cthe_0489 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_0807 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_2821 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_2281 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_0493 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Cthe_0288 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_0717 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_0808 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_2282 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_2820 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_0466 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Cthe_0477 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Cthe_0478 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Cthe_2425 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Cthe_2426 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:cth02040] D Cthe_0464 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Cthe_0465 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Cthe_0466 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Cthe_0467 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Cthe_0468 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Cthe_0469 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Cthe_0471 Flagellar hook-length control protein-like, C-terminal domain-containing protein K02414 fliK; flagellar hook-length control protein FliK D Cthe_0477 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Cthe_0478 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Cthe_0480 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Cthe_0481 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Cthe_0482 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Cthe_0483 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Cthe_0485 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Cthe_0484 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Cthe_0462 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Cthe_0463 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Cthe_0472 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Cthe_0474 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Cthe_2620 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Cthe_2621 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG D Cthe_2622 Flagellar protein FlgJ-like protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Cthe_2243 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Cthe_2244 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Cthe_2242 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Cthe_2236 flagellin domain protein K02406 fliC; flagellin D Cthe_2237 flagellin domain protein K02406 fliC; flagellin D Cthe_2218 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D Cthe_2217 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Cthe_2425 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Cthe_2426 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Cthe_2246 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Cthe_0895 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Cthe_0143 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D Cthe_0645 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cth01501] D Cthe_0322 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Cthe_2961 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Cthe_2965 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Cthe_2964 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Cthe_2963 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Cthe_2962 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Cthe_0377 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_3127 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_3146 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_1810 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_1811 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Cthe_0376 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Cthe_3145 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Cthe_1169 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Cthe_1760 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Cthe_0091 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Cthe_1011 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cth01502] D Cthe_1938 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Cthe_2647 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Cthe_2697 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Cthe_0977 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Cthe_0976 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Cthe_0974 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Cthe_1899 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cth01503] D Cthe_1804 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_0185 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_1702 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_1016 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_1037 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_1286 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Cthe_0260 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Cthe_1446 TIR protein K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cth01000] C 01001 Protein kinases [BR:cth01001] D Cthe_0574 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Cthe_1136 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Cthe_0634 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Cthe_0334 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Cthe_2899 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Cthe_2901 ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Cthe_3187 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Cthe_2653 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Cthe_1363 capsular exopolysaccharide family K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D Cthe_1393 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Cthe_1599 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Cthe_1409 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Cthe_2332 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Cthe_1527 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Cthe_0800 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Cthe_1268 DegS sensor signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Cthe_1311 signal transduction histidine kinase regulating citrate/malate metabolism K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Cthe_2944 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Cthe_2945 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Cthe_0810 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_0490 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_2284 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_2818 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_1585 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Cthe_1826 response regulator receiver sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cth01009] D Cthe_1200 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Cthe_1261 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Cthe_0550 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG D Cthe_0573 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Cthe_0544 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Cthe_0635 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cth01002] D Cthe_0909 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Cthe_1335 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Cthe_0852 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Cthe_0545 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Cthe_1038 spore protease K06012 gpr; spore protease [EC:3.4.24.78] D Cthe_0446 sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D Cthe_0375 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Cthe_2162 peptidase C26 K07010 K07010; putative glutamine amidotransferase D Cthe_0534 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Cthe_3005 Peptidoglycan-binding lysin domain-containing protein K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-] D Cthe_2413 NLP/P60 protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13] D Cthe_1249 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Cthe_1162 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Cthe_0556 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Cthe_2996 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124] D Cthe_1310 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Cthe_2358 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Cthe_3006 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Cthe_1934 Abortive infection protein K07052 K07052; CAAX protease family protein D Cthe_2176 Abortive infection protein K07052 K07052; CAAX protease family protein D Cthe_2417 Abortive infection protein K07052 K07052; CAAX protease family protein D Cthe_1677 Abortive infection protein K07052 K07052; CAAX protease family protein D Cthe_2452 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Cthe_2387 peptidase M14 carboxypeptidase A K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11] D Cthe_1899 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Cthe_0756 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Cthe_3149 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Cthe_2925 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Cthe_0541 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Cthe_0848 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Cthe_2207 isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D Cthe_2253 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Cthe_2276 AAA ATPase central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Cthe_0098 peptidase M50 K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D Cthe_0998 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Cthe_0377 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_3127 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_3146 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_1810 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_1286 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Cthe_0260 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Cthe_1446 TIR protein K04771 degP; serine protease Do [EC:3.4.21.107] D Cthe_3137 peptidase S8 and S53, subtilisin, kexin, sedolisin K01342 aprE; subtilisin [EC:3.4.21.62] D Cthe_3179 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_0272 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_0679 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_1171 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_1231 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_2740 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Cthe_1629 peptidase S14 ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Cthe_0082 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Cthe_2742 Sigma 54 interacting domain protein K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D Cthe_0773 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Cthe_2208 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Cthe_0764 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Cthe_1330 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Cthe_2079 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Cthe_0350 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Cthe_1857 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Cthe_1930 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Cthe_1421 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-] D Cthe_2205 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D Cthe_1048 Rhomboid family protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D Cthe_0813 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D Cthe_1010 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Cthe_2086 Peptidase U32, collagenase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Cthe_0666 HflC protein K04087 hflC; modulator of FtsH protease HflC D Cthe_0665 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:cth01003] D Cthe_3095 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D Cthe_1523 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Cthe_2338 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Cthe_2414 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Cthe_3177 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Cthe_0282 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Cthe_1284 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Cthe_1760 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Cthe_1905 glycosyl transferase family 28 K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D Cthe_1906 glycosyl transferase family 28 K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D Cthe_3114 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF D Cthe_2701 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Cthe_2600 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Cthe_1221 glycosyltransferase 36 K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cth01005] D Cthe_3094 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Cthe_3097 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Cthe_2600 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cth01011] D Cthe_2328 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Cthe_2615 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Cthe_0441 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Cthe_0112 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Cthe_2626 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Cthe_1041 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Cthe_0978 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Cthe_1938 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Cthe_2647 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Cthe_2697 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Cthe_1937 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Cthe_0976 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Cthe_0974 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Cthe_2305 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Cthe_1051 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Cthe_2636 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Cthe_1760 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Cthe_0091 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Cthe_1011 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Cthe_0979 penicillin-binding protein transpeptidase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Cthe_3047 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A D Cthe_3179 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_0272 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_0679 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_1171 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_1231 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Cthe_3006 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Cthe_1899 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Cthe_3005 Peptidoglycan-binding lysin domain-containing protein K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-] D Cthe_0884 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Cthe_1008 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Cthe_1953 spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Cthe_2415 spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Cthe_2616 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Cthe_0960 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Cthe_1804 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_0185 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_1702 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_1016 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_1037 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cth01004] D Cthe_0935 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Cthe_0130 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Cthe_0936 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Cthe_0132 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Cthe_0932 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Cthe_0934 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Cthe_2625 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Cthe_3169 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Cthe_0551 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Cthe_1232 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_0133 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_3124 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_0234 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Cthe_0937 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Cthe_1023 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Cthe_0713 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cth01006] D Cthe_0831 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Cthe_1001 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Cthe_0775 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Cthe_3041 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:cth01007] D Cthe_2815 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Cthe_0917 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Cthe_0648 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Cthe_0723 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Cthe_0686 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Cthe_2065 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Cthe_1935 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Cthe_2096 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Cthe_0787 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Cthe_0324 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Cthe_1237 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Cthe_1331 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Cthe_1543 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Cthe_0070 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Cthe_1332 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Cthe_1312 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Cthe_2381 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Cthe_2947 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Cthe_1228 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Cthe_3200 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Cthe_0214 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Cthe_0215 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Cthe_0755 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Cthe_0580 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Cthe_3101 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Cthe_0363 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-] D Cthe_2883 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Cthe_0610 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Cthe_0022 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Cthe_2800 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Cthe_1866 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Cthe_0025 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Cthe_2530 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Cthe_0856 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Cthe_0295 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Cthe_2221 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Cthe_2644 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cth00194] D Cthe_2609 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Cthe_2608 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Cthe_2607 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Cthe_2606 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Cthe_2605 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Cthe_2604 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Cthe_2603 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Cthe_2602 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cth03000] D Cthe_1728 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_1749 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_2320 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_2759 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Cthe_2634 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Cthe_2618 sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D Cthe_2505 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Cthe_2808 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Cthe_0210 transcriptional regulator, LacI family K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D Cthe_2871 TipAS antibiotic-recognition domain-containing protein K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D Cthe_0546 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Cthe_2978 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Cthe_2775 transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Cthe_0034 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Cthe_0719 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Cthe_1843 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Cthe_1844 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Cthe_1558 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Cthe_2524 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Cthe_1112 regulatory protein ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Cthe_0245 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Cthe_1895 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Cthe_1921 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Cthe_0620 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Cthe_1402 iron (metal) dependent repressor, DtxR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Cthe_1811 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Cthe_0376 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Cthe_3145 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Cthe_2585 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Cthe_2778 cytidyltransferase-related domain protein K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D Cthe_1462 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Cthe_2395 helix-turn-helix domain protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator D Cthe_2627 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D Cthe_1861 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator D Cthe_1798 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Cthe_0422 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Cthe_1655 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Cthe_2461 helix-turn-helix domain protein K07729 K07729; putative transcriptional regulator D Cthe_2698 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Cthe_2100 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Cthe_2655 stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D Cthe_2378 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Cthe_2362 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Cthe_2940 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Cthe_0815 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Cthe_1324 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Cthe_1792 transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D Cthe_0072 phage shock protein C, PspC K03973 pspC; phage shock protein C D Cthe_1057 phage shock protein C, PspC K03973 pspC; phage shock protein C D Cthe_1263 tryptophan RNA-binding attenuator protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D Cthe_0954 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Cthe_0450 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Cthe_0982 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cth03021] D Cthe_0289 helicase c2 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Cthe_2932 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Cthe_2724 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Cthe_2725 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Cthe_1314 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Cthe_0895 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Cthe_0890 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Cthe_2731 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Cthe_2544 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Cthe_1470 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Cthe_2992 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Cthe_1809 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Cthe_1438 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Cthe_2900 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03090 sigB; RNA polymerase sigma-B factor D Cthe_1012 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Cthe_0447 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Cthe_0448 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Cthe_0120 RNA polymerase, sigma 28 subunit, SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Cthe_2059 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor D Cthe_2521 RNA polymerase, sigma 28 subunit, SigI K03093 sigI; RNA polymerase sigma-I factor D Cthe_0058 RNA polymerase sigma-I factor K03093 sigI; RNA polymerase sigma-I factor D Cthe_2975 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03093 sigI; RNA polymerase sigma-I factor D Cthe_2120 RNA polymerase sigma-I factor K03093 sigI; RNA polymerase sigma-I factor D Cthe_0268 RNA polymerase sigma-I factor K03093 sigI; RNA polymerase sigma-I factor D Cthe_0315 RNA polymerase sigma-I factor K03093 sigI; RNA polymerase sigma-I factor D Cthe_1272 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03093 sigI; RNA polymerase sigma-I factor D Cthe_0403 RNA polymerase, sigma 28 subunit, SigI K03093 sigI; RNA polymerase sigma-I factor D Cthe_0994 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Cthe_0834 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Cthe_2719 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Cthe_1362 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Cthe_0334 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Cthe_2166 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Cthe_0583 response regulator receiver protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Cthe_0083 protein serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Cthe_2898 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D Cthe_2899 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Cthe_2901 ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Cthe_3187 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Cthe_2897 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA D Cthe_3026 transcription elongation factor GreA/GreB domain-containing protein K03624 greA; transcription elongation factor GreA D Cthe_2174 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cth03019] D Cthe_0158 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Cthe_0931 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Cthe_1302 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D Cthe_1091 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Cthe_0146 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Cthe_0143 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Cthe_0418 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Cthe_2174 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Cthe_1261 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Cthe_1322 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Cthe_2892 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Cthe_0774 RNA chaperone Hfq K03666 hfq; host factor-I protein D Cthe_2239 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Cthe_0113 hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:cth03011] D Cthe_2926 hypothetical protein K02875 RP-L14e; large subunit ribosomal protein L14e D Cthe_0714 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Cthe_1006 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Cthe_2909 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Cthe_2931 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Cthe_2920 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Cthe_2187 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Cthe_2728 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Cthe_2917 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Cthe_1782 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Cthe_2902 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Cthe_2930 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Cthe_2727 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Cthe_2929 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Cthe_2916 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Cthe_0417 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Cthe_0769 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Cthe_2912 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Cthe_2185 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Cthe_2907 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Cthe_1039 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Cthe_1348 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Cthe_2721 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Cthe_2906 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Cthe_2903 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Cthe_2904 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Cthe_2915 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Cthe_2918 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Cthe_2257 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Cthe_2722 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Cthe_2720 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Cthe_2723 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Cthe_1783 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Cthe_2913 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Cthe_2922 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Cthe_2910 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Cthe_2933 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Cthe_2919 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Cthe_0765 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Cthe_1223 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Cthe_0160 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Cthe_2908 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Cthe_2905 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Cthe_2914 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Cthe_0162 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Cthe_1279 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Cthe_2911 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Cthe_2921 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Cthe_2172 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Cthe_1026 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Cthe_2370 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Cthe_1224 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Cthe_2928 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Cthe_1298 Ribosomal protein L25-like protein K02897 RP-L25; large subunit ribosomal protein L25 D Cthe_2726 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A D Cthe_R0038 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Cthe_R0069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Cthe_R0060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Cthe_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Cthe_R0054 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0066 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0058 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0039 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Cthe_R0059 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Cthe_R0056 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Cthe_R0068 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cth03009] D Cthe_0931 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Cthe_1067 GTP-binding protein Era K03595 era; GTPase D Cthe_0163 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Cthe_0994 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Cthe_0834 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Cthe_2719 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Cthe_1362 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Cthe_3161 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Cthe_2092 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Cthe_0571 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Cthe_2935 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Cthe_1277 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Cthe_1319 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Cthe_2363 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Cthe_0981 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Cthe_2101 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Cthe_3180 hypothetical protein K18845 rmt; 16S rRNA (guanine(1405)-N(7))-methyltransferase [EC:2.1.1.179] D Cthe_0827 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Cthe_2060 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Cthe_2326 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Cthe_1519 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Cthe_0277 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Cthe_0572 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Cthe_1751 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Cthe_0693 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Cthe_1962 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Cthe_0278 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Cthe_0908 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Cthe_0803 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Cthe_1774 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Cthe_0767 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Cthe_0942 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Cthe_1320 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Cthe_0158 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Cthe_0153 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Cthe_2061 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D Cthe_1516 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Cthe_0575 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Cthe_1024 ribosome-associated GTPase EngA K03977 engA; GTPase D Cthe_0763 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A D Cthe_2081 GTP-binding proten HflX K03665 hflX; GTPase D Cthe_2595 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Cthe_1344 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Cthe_0990 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Cthe_0995 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Cthe_2373 S4 domain protein YaaA K14761 rlbA; ribosome-associated protein D Cthe_1238 iojap-like protein K09710 ybeB; ribosome-associated protein D Cthe_1069 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Cthe_0164 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Cthe_2875 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D Cthe_0877 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Cthe_1027 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cth03016] D Cthe_1389 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Cthe_0684 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Cthe_0250 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Cthe_2947 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Cthe_0787 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Cthe_1237 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Cthe_2096 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Cthe_0917 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Cthe_1935 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Cthe_1331 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Cthe_1543 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Cthe_3200 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Cthe_0070 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Cthe_1312 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Cthe_1228 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Cthe_2381 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Cthe_2065 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Cthe_0324 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Cthe_1332 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Cthe_0214 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Cthe_0215 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Cthe_0723 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Cthe_0686 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Cthe_1343 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Cthe_1369 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Cthe_0102 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Cthe_2939 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Cthe_0988 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Cthe_1064 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cthe_0720 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cthe_2595 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Cthe_0775 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Cthe_2365 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Cthe_2364 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Cthe_2369 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Cthe_R0015 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Cthe_0188 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Cthe_0503 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Cthe_3059 phosphotransferase KptA/Tpt1 K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D Cthe_2815 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Cthe_0648 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Cthe_2502 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Cthe_2685 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Cthe_0783 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Cthe_0150 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Cthe_1549 Methyltransferase type 12 K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Cthe_0461 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Cthe_0766 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Cthe_0893 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D Cthe_0127 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Cthe_2102 Methyltransferase type 11 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D Cthe_1222 RNA methyltransferase, TrmH family, group 3 K03437 spoU; RNA methyltransferase, TrmH family D Cthe_0722 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Cthe_2181 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Cthe_0959 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Cthe_3105 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Cthe_3106 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Cthe_3107 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Cthe_0166 4Fe-4S ferredoxin iron-sulfur binding domain protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Cthe_0183 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Cthe_0958 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Cthe_3185 tRNA-guanine transglycosylase, various specificities K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D Cthe_1063 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Cthe_2255 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Cthe_1775 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Cthe_2743 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Cthe_1776 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Cthe_3110 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Cthe_1301 protein of unknown function DUF795 K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D Cthe_0146 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Cthe_0418 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cth03012] D Cthe_0991 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Cthe_1225 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Cthe_1799 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Cthe_1005 translation elongation factor Ts K02357 tsf; elongation factor Ts D Cthe_2730 translation elongation factor Tu K02358 tuf; elongation factor Tu D Cthe_1794 translation elongation factor G K02355 fusA; elongation factor G D Cthe_2729 translation elongation factor G K02355 fusA; elongation factor G D Cthe_2593 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Cthe_1003 ribosome recycling factor K02838 frr; ribosome recycling factor D Cthe_2428 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Cthe_2631 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Cthe_2927 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Cthe_0847 translation elongation factor P K02356 efp; elongation factor P D Cthe_0365 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D Cthe_0328 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:cth03110] D Cthe_1217 ATP-dependent Clp protease, ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Cthe_1789 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Cthe_0312 ATPase AAA-2 domain protein K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE D Cthe_2741 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Cthe_0550 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG D Cthe_1322 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Cthe_2892 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Cthe_1321 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Cthe_1665 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Cthe_1852 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Cthe_1323 GrpE protein K03687 GRPE; molecular chaperone GrpE D Cthe_0037 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Cthe_3125 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Cthe_2891 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Cthe_1286 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Cthe_0260 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Cthe_1446 TIR protein K04771 degP; serine protease Do [EC:3.4.21.107] D Cthe_2253 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Cthe_2276 AAA ATPase central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Cthe_2602 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Cthe_3018 hydrogenase expression/synthesis HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Cthe_3017 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Cthe_3137 peptidase S8 and S53, subtilisin, kexin, sedolisin K01342 aprE; subtilisin [EC:3.4.21.62] D Cthe_0068 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Cthe_2633 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D Cthe_0360 thioredoxin K03671 TXN; thioredoxin D Cthe_0235 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3 C 04131 Membrane trafficking [BR:cth04131] D Cthe_0716 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Cthe_0137 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Cthe_1435 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Cthe_0550 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:cth04121] C 03051 Proteasome [BR:cth03051] D Cthe_0550 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:cth03032] D Cthe_0673 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Cthe_1728 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_1749 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_2320 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_2657 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Cthe_2371 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Cthe_2256 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Cthe_2418 AAA ATPase K02315 dnaC; DNA replication protein DnaC D Cthe_2467 AAA ATPase K02315 dnaC; DNA replication protein DnaC D Cthe_0896 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Cthe_1156 DNA primase catalytic core domain-containing protein K02316 dnaG; DNA primase [EC:2.7.7.101] D Cthe_1350 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_2186 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_1264 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Cthe_0996 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Cthe_2372 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Cthe_1040 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Cthe_2105 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Cthe_2144 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Cthe_0761 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Cthe_0886 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Cthe_1035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Cthe_2470 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Cthe_1513 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Cthe_2361 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Cthe_0306 DNA topoisomerase (ATP-hydrolyzing) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Cthe_2376 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Cthe_0305 DNA gyrase subunit B domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Cthe_0460 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cth03036] D Cthe_1728 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_1749 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_2320 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_0931 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Cthe_2657 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Cthe_2371 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Cthe_0774 RNA chaperone Hfq K03666 hfq; host factor-I protein D Cthe_0927 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Cthe_0687 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Cthe_0688 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Cthe_0444 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Cthe_2661 Septum formation initiator K13052 divIC; cell division protein DivIC D Cthe_1860 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Cthe_1095 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Cthe_0638 FHA domain containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Cthe_3039 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Cthe_1968 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Cthe_0980 cell division protein FtsL K03586 ftsL; cell division protein FtsL D Cthe_0442 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Cthe_0975 stage V sporulation protein E K03588 ftsW; cell division protein FtsW D Cthe_1859 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Cthe_0445 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Cthe_2088 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Cthe_1804 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_0185 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_1702 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_1016 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_1037 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_0092 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Cthe_0093 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Cthe_0094 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Cthe_0788 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein D Cthe_0791 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF D Cthe_0088 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Cthe_2619 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Cthe_0089 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Cthe_0090 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Cthe_0983 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Cthe_2377 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Cthe_2378 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Cthe_2362 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Cthe_2364 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Cthe_2363 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Cthe_0461 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Cthe_0676 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Cthe_0728 integrase family protein K04763 xerD; integrase/recombinase XerD D Cthe_1127 integrase family protein K04763 xerD; integrase/recombinase XerD D Cthe_0596 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein D Cthe_0116 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:cth03400] D Cthe_1554 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Cthe_2068 DNA-(apurinic or apyrimidinic site) lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Cthe_1283 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Cthe_0289 helicase c2 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Cthe_1486 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Cthe_3126 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Cthe_2085 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Cthe_3109 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Cthe_3108 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Cthe_0458 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Cthe_1346 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Cthe_0208 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Cthe_1035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Cthe_0886 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Cthe_0311 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Cthe_0309 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Cthe_2737 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Cthe_0206 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Cthe_2876 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Cthe_0968 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Cthe_2724 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Cthe_2725 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Cthe_2932 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Cthe_1314 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Cthe_2632 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Cthe_0777 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Cthe_1014 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Cthe_0776 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Cthe_0833 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Cthe_0832 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Cthe_1264 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Cthe_0996 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Cthe_2372 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Cthe_1040 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Cthe_2105 AAA ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Cthe_2144 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Cthe_1350 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_2186 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_2470 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Cthe_1513 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Cthe_2315 DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D Cthe_1747 DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D Cthe_2249 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Cthe_3190 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Cthe_1050 recA protein K03553 recA; recombination protein RecA D Cthe_0181 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Cthe_0182 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Cthe_0180 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Cthe_0566 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Cthe_0944 Rad50 zinc hook domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Cthe_2411 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11 D Cthe_0945 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11 D Cthe_1786 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Cthe_2374 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Cthe_1278 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Cthe_2890 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Cthe_1066 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Cthe_2142 recombination protein RecR K06187 recR; recombination protein RecR D Cthe_0814 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Cthe_2039 recombination helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Cthe_2040 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Cthe_3218 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Cthe_2297 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Cthe_2361 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Cthe_0306 DNA topoisomerase (ATP-hydrolyzing) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Cthe_2376 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Cthe_0305 DNA gyrase subunit B domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Cthe_0460 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Cthe_2657 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Cthe_2083 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Cthe_0773 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Cthe_2208 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Cthe_1049 regulatory protein RecX K03565 recX; regulatory protein D Cthe_0053 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Cthe_0989 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:cth03029] D Cthe_0991 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Cthe_1225 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Cthe_1005 translation elongation factor Ts K02357 tsf; elongation factor Ts D Cthe_2730 translation elongation factor Tu K02358 tuf; elongation factor Tu D Cthe_1794 translation elongation factor G K02355 fusA; elongation factor G D Cthe_2729 translation elongation factor G K02355 fusA; elongation factor G D Cthe_1067 GTP-binding protein Era K03595 era; GTPase D Cthe_0723 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Cthe_1237 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Cthe_1331 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Cthe_1543 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Cthe_1312 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Cthe_1935 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Cthe_1032 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Cthe_1541 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Cthe_1031 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Cthe_1540 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Cthe_1033 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Cthe_1542 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Cthe_1174 protein of unknown function DUF155 K23499 RMND1; required for meiotic nuclear division protein 1 D Cthe_1350 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_2186 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Cthe_1322 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Cthe_1323 GrpE protein K03687 GRPE; molecular chaperone GrpE D Cthe_2892 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Cthe_2891 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Cthe_1321 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Cthe_1064 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cthe_0720 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cthe_2367 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Cthe_0550 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cth02000] D Cthe_1501 ABC transporter transmembrane region K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_0396 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_3147 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_3148 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_1500 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_0397 ABC transporter transmembrane region K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Cthe_2998 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Cthe_1685 ABC transporter transmembrane region K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Cthe_0534 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D Cthe_2270 ABC transporter related protein K18231 msr; macrolide transport system ATP-binding/permease protein D Cthe_2531 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Cthe_2532 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Cthe_2533 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Cthe_2534 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Cthe_1570 extracellular solute-binding protein family 3 K15553 ssuA; sulfonate transport system substrate-binding protein D Cthe_1571 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Cthe_1572 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Cthe_1588 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Cthe_1586 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Cthe_1587 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Cthe_0747 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Cthe_0748 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Cthe_0749 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Cthe_0750 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Cthe_2802 extracellular solute-binding protein family 3 K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Cthe_2575 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Cthe_2803 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Cthe_2791 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Cthe_2116 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Cthe_2574 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Cthe_2573 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Cthe_2790 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Cthe_2118 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Cthe_2804 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Cthe_1862 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Cthe_0393 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Cthe_2446 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D Cthe_0392 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Cthe_2448 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Cthe_0391 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Cthe_2447 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Cthe_1576 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Cthe_1580 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Cthe_1581 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Cthe_1579 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein D Cthe_1957 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Cthe_1020 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Cthe_2128 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Cthe_1046 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Cthe_1019 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Cthe_2126 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Cthe_1018 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Cthe_2125 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Cthe_1605 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein D Cthe_1604 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Cthe_1603 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Cthe_1602 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Cthe_2278 extracellular solute-binding protein family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D Cthe_2279 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Cthe_2280 ABC transporter related protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Cthe_1555 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D Cthe_1556 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Cthe_1557 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein D Cthe_1823 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein D Cthe_1822 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein D Cthe_1821 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein D Cthe_1820 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D Cthe_1819 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D Cthe_1458 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Cthe_2982 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Cthe_1457 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Cthe_1456 ABC transporter related protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Cthe_2961 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Cthe_2965 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Cthe_2964 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Cthe_2963 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Cthe_2962 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Cthe_0910 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Cthe_1754 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Cthe_1753 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Cthe_1752 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Cthe_0547 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Cthe_0549 ABC-3 protein K09816 znuB; zinc transport system permease protein D Cthe_0548 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Cthe_1802 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Cthe_1803 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Cthe_1801 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Cthe_0061 BioY protein K03523 bioY; biotin transport system substrate-specific component D Cthe_2937 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Cthe_2934 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Cthe_2936 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Cthe_2943 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Cthe_2942 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Cthe_2707 ABC-2 type transporter K25151 gldF; gliding motility-associated transport system permease protein D Cthe_2706 ABC transporter related protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D Cthe_2708 ABC-type uncharacterized transport system K25153 gldG; gliding motility-associatede transport system auxiliary component D Cthe_1525 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein D Cthe_1526 ABC transporter related protein K11631 bceA; bacitracin transport system ATP-binding protein D Cthe_1859 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Cthe_1860 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Cthe_1188 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein D Cthe_1187 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein D Cthe_1189 ABC transporter related protein K25156 evrA; viologen exporter family transport system ATP-binding protein D Cthe_1535 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Cthe_3067 membrane spanning protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Cthe_1667 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Cthe_1536 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Cthe_2970 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Cthe_1668 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Cthe_2290 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Cthe_3066 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Cthe_1415 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Cthe_0819 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Cthe_0540 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Cthe_2111 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Cthe_1562 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Cthe_3172 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Cthe_1763 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Cthe_0539 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Cthe_2110 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Cthe_3170 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Cthe_1563 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Cthe_0384 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Cthe_0193 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 D Cthe_2306 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Cthe_0743 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Cthe_0299 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Cthe_1448 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Cthe_1202 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Cthe_2382 major facilitator superfamily MFS_1 K23677 SPNS; MFS transporter, Spinster family, sphingosine-1-phosphate transporter D Cthe_2736 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Cthe_0117 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Cthe_2735 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Cthe_0149 HPrNtr domain-containing protein K02784 ptsH; phosphocarrier protein HPr D Cthe_1499 ammonium transporter K03320 amt; ammonium transporter, Amt family D Cthe_3075 Protein of unknown function DUF3520 K07114 yfbK; Ca-activated chloride channel homolog D Cthe_3131 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog D Cthe_2511 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D Cthe_1939 magnesium transporter K06213 mgtE; magnesium transporter D Cthe_2425 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Cthe_2426 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Cthe_2215 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Cthe_2870 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Cthe_0668 spore germination protein K06296 gerKB; spore germination protein KB D Cthe_0670 spore germination protein K06296 gerKB; spore germination protein KB D Cthe_2063 spore germination protein K06311 yndE; spore germination protein D Cthe_2594 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Cthe_3117 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Cthe_1494 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Cthe_3173 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter D Cthe_2757 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter D Cthe_1658 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Cthe_3184 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Cthe_1659 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Cthe_3183 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Cthe_1251 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Cthe_2180 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D Cthe_2810 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter D Cthe_0064 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter D Cthe_1111 arsenical-resistance protein K03325 ACR3; arsenite transporter D Cthe_2688 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B D Cthe_3064 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B D Cthe_1051 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Cthe_2636 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Cthe_1252 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins D Cthe_1426 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Cthe_1427 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Cthe_1514 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein D Cthe_0975 stage V sporulation protein E K03588 ftsW; cell division protein FtsW D Cthe_1420 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein D Cthe_1425 Inorganic diphosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Cthe_0509 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Cthe_0701 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Cthe_0699 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D Cthe_0700 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Cthe_1290 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Cthe_1948 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Cthe_2653 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Cthe_2652 lipopolysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator D Cthe_1363 capsular exopolysaccharide family K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D Cthe_2777 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D Cthe_1403 FeoA family protein K04758 feoA; ferrous iron transport protein A D Cthe_0619 FeoA family protein K04758 feoA; ferrous iron transport protein A D Cthe_0618 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Cthe_1404 Ferrous iron transport protein B domain-containing protein K04759 feoB; ferrous iron transport protein B D Cthe_1919 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:cth02044] D Cthe_1335 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Cthe_0852 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Cthe_1103 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Cthe_1104 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Cthe_1107 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Cthe_0853 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Cthe_1105 Type II secretion system F domain-containing protein K02653 pilC; type IV pilus assembly protein PilC D Cthe_2686 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Cthe_0656 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Cthe_1102 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Cthe_0257 twitching motility protein K02669 pilT; twitching motility protein PilT D Cthe_1106 twitching motility protein K02669 pilT; twitching motility protein PilT D Cthe_0545 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Cthe_1339 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Cthe_0629 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Cthe_1338 Type II secretion system F domain-containing protein K12510 tadB; tight adherence protein B D Cthe_1337 Type II secretion system F domain-containing protein K12511 tadC; tight adherence protein C D Cthe_0790 protein of unknown function YGGT K02221 yggT; YggT family protein D Cthe_1230 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Cthe_2599 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Cthe_0606 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Cthe_2752 beta-lactamase domain protein K02238 comEC; competence protein ComEC D Cthe_0851 Late competence development protein ComFB K02241 comFB; competence protein ComFB D Cthe_0485 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Cthe_0484 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Cthe_0759 type III secretion exporter K04061 flhB2; flagellar biosynthesis protein D Cthe_0465 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Cthe_0467 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Cthe_0468 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Cthe_0478 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Cthe_0480 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Cthe_0481 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Cthe_0482 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Cthe_0483 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Cthe_1385 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Cthe_0904 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Cthe_2718 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Cthe_0903 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Cthe_0144 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Cthe_2923 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Cthe_0770 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Cthe_0926 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Cthe_0957 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Cthe_2367 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:cth02042] D Cthe_2870 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Cthe_3193 phospholipase C zinc-binding protein K01114 plc; phospholipase C [EC:3.1.4.3] C 02022 Two-component system [BR:cth02022] D Cthe_1393 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Cthe_1599 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Cthe_1394 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Cthe_1600 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Cthe_1409 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3] D Cthe_2332 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Cthe_2333 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR D Cthe_1527 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Cthe_1528 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Cthe_0800 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Cthe_1408 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Cthe_1288 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Cthe_1268 DegS sensor signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Cthe_0812 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Cthe_3087 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Cthe_1311 signal transduction histidine kinase regulating citrate/malate metabolism K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Cthe_2944 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Cthe_2945 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Cthe_0810 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_0490 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_2284 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_2818 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_0805 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0479 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0811 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_1318 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0167 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_1380 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0489 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_0807 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_2821 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_2281 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_1585 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Cthe_1824 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Cthe_1584 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Cthe_3164 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Cthe_0203 ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR D Cthe_1826 response regulator receiver sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:cth02035] D Cthe_0810 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_0490 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_2284 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_2818 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Cthe_0878 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0809 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_2285 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_2817 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0491 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_3029 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0080 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_0038 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Cthe_2308 CheC domain protein K03409 cheX; chemotaxis protein CheX D Cthe_2406 hypothetical protein K03409 cheX; chemotaxis protein CheX D Cthe_0126 CheC domain protein K03409 cheX; chemotaxis protein CheX D Cthe_1176 CheC domain protein K03409 cheX; chemotaxis protein CheX D Cthe_0492 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Cthe_0493 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Cthe_0288 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_0717 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_0808 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_2282 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_2820 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Cthe_0489 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_0807 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_2821 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_2281 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Cthe_0805 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0479 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0811 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_1318 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_0167 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_1380 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Cthe_2819 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_3156 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_2663 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_0039 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_0298 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_1498 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_3030 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Cthe_3036 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Cthe_0467 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Cthe_0468 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Cthe_0469 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Cthe_0480 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Cthe_0481 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Cthe_0482 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Cthe_0483 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Cthe_0485 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Cthe_0484 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Cthe_0466 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Cthe_0477 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Cthe_0478 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Cthe_0465 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Cthe_0464 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Cthe_0471 Flagellar hook-length control protein-like, C-terminal domain-containing protein K02414 fliK; flagellar hook-length control protein FliK D Cthe_0462 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Cthe_0463 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Cthe_0472 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Cthe_2620 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Cthe_2621 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG D Cthe_2622 Flagellar protein FlgJ-like protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Cthe_0474 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Cthe_2243 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Cthe_2244 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Cthe_2242 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Cthe_2236 flagellin domain protein K02406 fliC; flagellin D Cthe_2237 flagellin domain protein K02406 fliC; flagellin D Cthe_2218 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D Cthe_2217 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Cthe_2425 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Cthe_2426 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Cthe_2240 protein of unknown function DUF180 K13626 fliW; flagellar assembly factor FliW D Cthe_2246 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Cthe_2219 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Cthe_0475 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD D Cthe_0486 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D Cthe_0487 cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Cthe_0257 twitching motility protein K02669 pilT; twitching motility protein PilT D Cthe_1106 twitching motility protein K02669 pilT; twitching motility protein PilT D Cthe_1103 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Cthe_1104 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Cthe_1107 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Cthe_0853 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Cthe_1105 Type II secretion system F domain-containing protein K02653 pilC; type IV pilus assembly protein PilC D Cthe_1335 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Cthe_0852 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Cthe_1102 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Cthe_2686 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Cthe_0656 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Cthe_0545 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Cthe_1339 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Cthe_0629 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins [BR:cth03037] D Cthe_0193 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 C 04812 Cytoskeleton proteins [BR:cth04812] D Cthe_1168 AMMECR1 domain protein K06990 MEMO1; MEMO1 family protein D Cthe_0088 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Cthe_2619 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Cthe_1159 StbA family protein K18640 parM; plasmid segregation protein ParM D Cthe_0445 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Cthe_0444 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Cthe_0092 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Cthe_0093 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Cthe_0094 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Cthe_2377 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Cthe_2378 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Cthe_2362 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cth04147] D Cthe_0550 Heat shock protein Hsp90-like protein K04079 HSP90A; molecular chaperone HtpG D Cthe_0143 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Cthe_0137 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Cthe_0138 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Cthe_0756 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Cthe_2892 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Cthe_1322 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Cthe_0217 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Cthe_0681 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Cthe_2730 translation elongation factor Tu K02358 tuf; elongation factor Tu D Cthe_1369 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Cthe_1053 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Cthe_0345 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Cthe_1232 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_0133 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_3124 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Cthe_1200 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Cthe_2924 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Cthe_1345 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Cthe_0178 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Cthe_0179 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Cthe_2191 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Cthe_2442 Carbohydrate kinase, FGGY-like protein K00864 glpK; glycerol kinase [EC:2.7.1.30] D Cthe_0196 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0202 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_0863 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_1539 Glutamine synthetase type III-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Cthe_2529 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Cthe_3035 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Cthe_1246 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Cthe_0139 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Cthe_1435 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cth02048] D Cthe_3218 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Cthe_2297 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Cthe_3219 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Cthe_2296 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Cthe_2299 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Cthe_3204 CRISPR-associated HD domain protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Cthe_2301 CRISPR-associated regulatory protein, DevR family K19075 cst2; CRISPR-associated protein Cst2 D Cthe_2298 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Cthe_3220 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Cthe_2300 CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t D Cthe_2303 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Cthe_3201 CRISPR-associated protein, Csh1 family K19114 csh1; CRISPR-associated protein Csh1 D Cthe_3202 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2 D Cthe_3203 CRISPR-associated protein Cas5, Hmari subtype K19116 cas5h; CRISPR-associated protein Cas5h D Cthe_3211 protein of unknown function DUF324 K19134 csx10; CRISPR-associated protein Csx10 D Cthe_2053 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10 D Cthe_2054 protein of unknown function DUF324 K09002 csm3; CRISPR-associated protein Csm3 D Cthe_1144 restriction modification system DNA specificity domain-containing protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Cthe_1145 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Cthe_1512 Type II site-specific deoxyribonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D Cthe_2470 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Cthe_1513 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Cthe_1728 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_1749 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_2320 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Cthe_0518 Type III site-specific deoxyribonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] D Cthe_0519 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Cthe_1641 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D Cthe_1731 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D Cthe_2699 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Cthe_2501 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Cthe_2698 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Cthe_1462 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Cthe_0072 phage shock protein C, PspC K03973 pspC; phage shock protein C D Cthe_1057 phage shock protein C, PspC K03973 pspC; phage shock protein C D Cthe_0445 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Cthe_0088 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Cthe_2619 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Cthe_1064 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Cthe_0720 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:cth04090] C 01504 Antimicrobial resistance genes [BR:cth01504] D Cthe_3180 hypothetical protein K18845 rmt; 16S rRNA (guanine(1405)-N(7))-methyltransferase [EC:2.1.1.179] D Cthe_0033 small GTP-binding protein K18220 tetM; ribosomal protection tetracycline resistance protein D Cthe_2270 ABC transporter related protein K18231 msr; macrolide transport system ATP-binding/permease protein D Cthe_1678 transferase hexapeptide repeat containing protein K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D Cthe_0377 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_3127 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_3146 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_1810 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Cthe_1811 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Cthe_0376 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Cthe_3145 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Cthe_1169 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Cthe_1899 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cth00537] D Cthe_0756 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cth03100] D Cthe_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Cthe_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Cthe_R0067 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Cthe_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Cthe_R0052 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Cthe_R0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Cthe_R0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Cthe_R0017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Cthe_R0070 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Cthe_R0029 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Cthe_R0063 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Cthe_R0026 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Cthe_R0007 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Cthe_R0024 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Cthe_R0050 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Cthe_R0062 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Cthe_R0012 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Cthe_R0001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Cthe_R0027 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Cthe_R0002 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Cthe_R0003 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Cthe_R0032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Cthe_R0006 tRNA-His K14226 tRNA-His; tRNA His D Cthe_R0055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Cthe_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Cthe_R0010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Cthe_R0005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Cthe_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Cthe_R0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Cthe_R0008 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Cthe_R0061 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Cthe_R0009 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Cthe_R0049 tRNA-Met K14230 tRNA-Met; tRNA Met D Cthe_R0016 tRNA-Met K14230 tRNA-Met; tRNA Met D Cthe_R0019 tRNA-Met K14230 tRNA-Met; tRNA Met D Cthe_R0048 tRNA-Met K14230 tRNA-Met; tRNA Met D Cthe_R0020 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Cthe_R0028 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Cthe_R0036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Cthe_R0025 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Cthe_R0013 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Cthe_R0046 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Cthe_R0043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Cthe_R0042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Cthe_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Cthe_R0031 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Cthe_R0034 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Cthe_R0064 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Cthe_R0023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Cthe_R0014 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Cthe_R0021 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Cthe_R0065 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Cthe_R0071 tRNA-Val K14237 tRNA-Val; tRNA Val D Cthe_R0035 tRNA-Val K14237 tRNA-Val; tRNA Val D Cthe_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val D Cthe_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val D Cthe_R0054 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0066 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0058 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Cthe_R0039 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Cthe_R0059 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Cthe_R0056 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Cthe_R0068 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Cthe_R0038 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Cthe_R0069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Cthe_R0060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Cthe_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Cthe_R0033 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Cthe_R0015 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Cthe_R0053 ssrA; tmRNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Cthe_0928 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D Cthe_0101 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-] D Cthe_0613 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Cthe_0614 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Cthe_1964 alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D Cthe_1465 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Cthe_1965 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Cthe_0340 ferredoxin K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3] D Cthe_0338 NADH-quinone oxidoreductase, E subunit K18330 hndA; NADP-reducing hydrogenase subunit HndA [EC:1.12.1.3] D Cthe_0341 NADH dehydrogenase (quinone) K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3] D Cthe_0342 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D Cthe_0016 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2] D Cthe_0373 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Cthe_1110 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Cthe_0008 hypothetical protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Cthe_0506 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Cthe_1167 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Cthe_1578 (Formate-C-acetyltransferase)-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Cthe_0647 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Cthe_3084 rRNA (guanine-N(2)-)-methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D Cthe_1218 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Cthe_1181 transglutaminase domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D Cthe_3112 glycosidase related protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320] D Cthe_2692 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Cthe_2702 polysaccharide pyruvyl transferase CsaB K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Cthe_0368 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D Cthe_0984 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Cthe_0561 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Cthe_0030 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182] D Cthe_1785 DNA integrity scanning, DisA, linker region K07067 disA; diadenylate cyclase [EC:2.7.7.85] D Cthe_1166 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Cthe_0119 putative anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D Cthe_0110 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Cthe_1790 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D Cthe_2058 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Cthe_2252 thioesterase family protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D Cthe_1260 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Cthe_2681 protein serine/threonine phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D Cthe_2654 Protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D Cthe_1367 Protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D Cthe_2747 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Cthe_0855 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-] D Cthe_2258 putative PAS/PAC sensor protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D Cthe_1070 7TM receptor with intracellular metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Cthe_2095 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Cthe_1838 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Cthe_1963 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Cthe_2119 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Cthe_2590 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Cthe_0912 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Cthe_0211 glycoside hydrolase family 16 K01216 bglS; licheninase [EC:3.2.1.73] D Cthe_1400 glycosyl hydrolase 53 domain protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D Cthe_0015 alpha-L-arabinofuranosidase B K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99] D Cthe_3012 Carbohydrate binding family 6 K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136] D Cthe_1398 Dockerin type 1 K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155] D Cthe_2089 glycoside hydrolase family 48 K20829 celS; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.176] D Cthe_2498 N-acetylmuramoyl-L-alanine amidase family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_0605 NLP/P60 protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_1611 N-acetylmuramoyl-L-alanine amidase family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_2782 N-acetylmuramoyl-L-alanine amidase family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Cthe_0567 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Cthe_1903 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Cthe_2972 glycoside hydrolase family 11 K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Cthe_1074 delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D Cthe_2798 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Cthe_1054 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Cthe_0253 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Cthe_1183 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Cthe_2127 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Cthe_2596 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D Cthe_1958 UV-endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D Cthe_2696 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Cthe_0246 Carbohydrate binding family 6 K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23] D Cthe_2097 Protein of unknown function DUF2600 K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130] D Cthe_1841 PP-loop domain protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Cthe_0369 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Cthe_3104 CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D Cthe_2204 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D Cthe_2431 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Cthe_2430 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Cthe_2435 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Cthe_2666 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Cthe_1917 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Cthe_0244 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D Cthe_2973 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D Cthe_2432 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Cthe_2433 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Cthe_2434 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Cthe_0721 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D Cthe_1568 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB D Cthe_3024 NADH/Ubiquinone/plastoquinone (complex I) K14086 echA; ech hydrogenase subunit A D Cthe_3023 respiratory-chain NADH dehydrogenase subunit 1 K14087 echB; ech hydrogenase subunit B D Cthe_3022 NADH ubiquinone oxidoreductase 20 kDa subunit K14088 echC; ech hydrogenase subunit C D Cthe_3021 NADH dehydrogenase (ubiquinone) 30 kDa subunit K14089 echD; ech hydrogenase subunit D D Cthe_3020 NADH-ubiquinone oxidoreductase chain 49kDa K14090 echE; ech hydrogenase subunit E D Cthe_3019 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K14091 echF; ech hydrogenase subunit F C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Cthe_0792 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Cthe_2350 cell wall hydrolase SleB K01449 cwlJ; cell wall hydrolase D Cthe_0243 copper amine oxidase-like domain-containing protein K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D Cthe_2664 ABC-1 domain-containing protein K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism D Cthe_1473 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Cthe_1853 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Cthe_2462 prophage antirepressor K07741 antB; anti-repressor protein D Cthe_1955 Tex-like protein-like protein K06959 tex; protein Tex D Cthe_1316 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A D Cthe_2375 hypothetical protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation D Cthe_2662 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein D Cthe_0611 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Cthe_1216 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Cthe_1791 UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator D Cthe_2739 trigger factor K03545 tig; trigger factor D Cthe_1815 UreE urease accessory domain-containing protein K03187 ureE; urease accessory protein D Cthe_1814 Urease accessory protein UreF K03188 ureF; urease accessory protein D Cthe_1813 urease accessory protein UreG K03189 ureG; urease accessory protein D Cthe_1812 Urease accessory protein UreD K03190 ureD; urease accessory protein D Cthe_2748 SsrA-binding protein K03664 smpB; SsrA-binding protein D Cthe_3015 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Cthe_3014 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Cthe_3013 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Cthe_1060 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE D Cthe_3016 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Cthe_0455 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Cthe_0085 Negative regulator of genetic competence K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D Cthe_1854 methylated-DNA/protein-cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D Cthe_3048 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Cthe_0757 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Cthe_1883 SMC domain protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D Cthe_0758 Uncharacterized protein family UPF0102 K07460 yraN; putative endonuclease D Cthe_0459 DNA protecting protein DprA K04096 smf; DNA processing protein D Cthe_2473 Terminase small subunit K07474 xtmA; phage terminase small subunit D Cthe_2474 phage terminase, large subunit, PBSX family K06909 xtmB; phage terminase large subunit D Cthe_0617 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Cthe_1734 phage/plasmid primase, P4 family K06919 K06919; putative DNA primase/helicase D Cthe_1986 phage/plasmid primase, P4 family K06919 K06919; putative DNA primase/helicase D Cthe_2847 phage/plasmid primase, P4 family K06919 K06919; putative DNA primase/helicase D Cthe_2865 phage/plasmid primase, P4 family K06919 K06919; putative DNA primase/helicase D Cthe_0588 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0496 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0510 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0128 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0159 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0141 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0692 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0698 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0192 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_2114 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_2153 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_1999 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_2173 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_2188 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_1496 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_1392 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_1469 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_2715 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_2716 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_3181 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_3182 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_3208 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0348 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0879 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_1206 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_1242 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0304 Integrase catalytic region K07482 K07482; transposase, IS30 family D Cthe_0516 IS66 Orf2 family protein K07484 K07484; transposase D Cthe_0515 transposase IS66 K07484 K07484; transposase D Cthe_1550 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Cthe_1884 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Cthe_2484 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Cthe_2770 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Cthe_2031 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Cthe_1432 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Cthe_0587 transposase mutator type K07493 K07493; putative transposase D Cthe_0594 transposase mutator type K07493 K07493; putative transposase D Cthe_0148 transposase mutator type K07493 K07493; putative transposase D Cthe_1889 transposase mutator type K07493 K07493; putative transposase D Cthe_1874 transposase mutator type K07493 K07493; putative transposase D Cthe_1901 transposase mutator type K07493 K07493; putative transposase D Cthe_1991 transposase mutator type K07493 K07493; putative transposase D Cthe_2017 transposase mutator type K07493 K07493; putative transposase D Cthe_2201 transposase mutator type K07493 K07493; putative transposase D Cthe_1533 transposase mutator type K07493 K07493; putative transposase D Cthe_2816 transposase mutator type K07493 K07493; putative transposase D Cthe_2829 transposase mutator type K07493 K07493; putative transposase D Cthe_2832 transposase mutator type K07493 K07493; putative transposase D Cthe_2671 transposase mutator type K07493 K07493; putative transposase D Cthe_2672 transposase mutator type K07493 K07493; putative transposase D Cthe_2858 transposase mutator type K07493 K07493; putative transposase D Cthe_2958 transposase mutator type K07493 K07493; putative transposase D Cthe_3051 transposase mutator type K07493 K07493; putative transposase D Cthe_3207 transposase mutator type K07493 K07493; putative transposase D Cthe_3216 transposase mutator type K07493 K07493; putative transposase D Cthe_0356 transposase mutator type K07493 K07493; putative transposase D Cthe_0371 transposase mutator type K07493 K07493; putative transposase D Cthe_0970 transposase mutator type K07493 K07493; putative transposase D Cthe_0801 transposase mutator type K07493 K07493; putative transposase D Cthe_1193 transposase mutator type K07493 K07493; putative transposase D Cthe_0292 transposase mutator type K07493 K07493; putative transposase D Cthe_1886 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_0585 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_2772 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_2135 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_2012 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_2000 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_1992 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_1975 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_1880 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_1691 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_1686 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_1682 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_1675 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_1673 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_1656 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_0919 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_1661 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Cthe_0590 transposase IS3/IS911 family protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Cthe_2143 Uncharacterized protein family UPF0133 K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Cthe_3000 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Cthe_0612 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family C 99978 Cell growth D Cthe_2769 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D Cthe_2389 pro-sigmaK processing inhibitor BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery D Cthe_0280 Coat F domain protein K06329 cotF; spore coat protein F D Cthe_0044 Spore coat protein CotH K06330 cotH; spore coat protein H D Cthe_1084 spore coat protein, CotS family K06331 cotI; spore coat protein I D Cthe_0415 spore coat protein CotJB K06333 cotJB; spore coat protein JB D Cthe_0414 manganese containing catalase K06334 cotJC; spore coat protein JC D Cthe_1083 spore coat protein, CotS family K06337 cotS; spore coat-associated protein S D Cthe_1085 glycosyl transferase group 1 K06338 cotSA; spore coat protein SA D Cthe_2366 single-stranded nucleic acid binding R3H domain-containing protein K06346 jag; spoIIIJ-associated protein D Cthe_2099 nucleoside recognition domain protein K06373 spmA; spore maturation protein A D Cthe_2098 nucleoside recognition domain protein K06374 spmB; spore maturation protein B D Cthe_0118 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Cthe_2163 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Cthe_0675 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M D Cthe_1328 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D Cthe_1920 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R D Cthe_0845 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA D Cthe_0844 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB D Cthe_0843 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D Cthe_0842 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD D Cthe_0841 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE D Cthe_0840 stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF D Cthe_0839 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG D Cthe_0838 hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH D Cthe_1021 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D Cthe_1609 Resolvase domain-containing protein K06400 spoIVCA; site-specific DNA recombinase D Cthe_1671 Resolvase domain-containing protein K06400 spoIVCA; site-specific DNA recombinase D Cthe_0001 Resolvase domain-containing protein K06400 spoIVCA; site-specific DNA recombinase D Cthe_1701 Resolvase domain-containing protein K06400 spoIVCA; site-specific DNA recombinase D Cthe_1700 Resolvase domain-containing protein K06400 spoIVCA; site-specific DNA recombinase D Cthe_2325 Resolvase domain-containing protein K06400 spoIVCA; site-specific DNA recombinase D Cthe_1294 Recombinase K06400 spoIVCA; site-specific DNA recombinase D Cthe_0122 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D Cthe_0123 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D Cthe_0124 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D Cthe_0125 stage V sporulation protein ae K06407 spoVAE; stage V sporulation protein AE D Cthe_0420 dipicolinate synthase subunit A K06410 spoVFA; dipicolinate synthase subunit A D Cthe_0421 dipicolinic acid synthetase, B subunit K06411 spoVFB; dipicolinate synthase subunit B D Cthe_2628 SpoVG family protein K06412 spoVG; stage V sporulation protein G D Cthe_1203 SpoVR family protein K06415 spoVR; stage V sporulation protein R D Cthe_1089 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D Cthe_0929 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D Cthe_2230 acylneuraminate cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF D Cthe_3176 small acid-soluble spore protein alpha/beta type K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP) D Cthe_0216 small acid-soluble spore protein alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D Cthe_2349 hypothetical protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP) D Cthe_1179 small acid-soluble spore protein, H-type K06425 sspH; small acid-soluble spore protein H (minor) D Cthe_2400 sporulation peptidase YabG K06436 yabG; spore coat assemly protein D Cthe_2507 peptidase U57 YabG K06436 yabG; spore coat assemly protein D Cthe_1072 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein D Cthe_0667 GerA spore germination protein K06295 gerKA; spore germination protein KA D Cthe_0669 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Cthe_2064 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Cthe_0187 Lipoprotein LpqB, GerMN domain-containing protein K06298 gerM; germination protein M D Cthe_1942 Lipoprotein LpqB, GerMN domain-containing protein K06298 gerM; germination protein M D Cthe_2062 GerA spore germination protein K06310 yndD; spore germination protein D Cthe_2416 germination protein YpeB K06313 ypeB; spore germination protein C 99993 Cell motility C 99995 Signaling proteins D Cthe_1007 GTP-binding protein TypA K06207 typA; GTP-binding protein D Cthe_0409 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D Cthe_1071 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Cthe_1304 PhoH family protein K07175 phoH2; PhoH-like ATPase D Cthe_1205 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase C 99992 Structural proteins D Cthe_1762 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D Cthe_1601 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Cthe_2307 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Cthe_3118 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Cthe_1487 hypothetical protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D Cthe_0111 PHP domain protein K04477 ycdX; putative hydrolase D Cthe_1382 Patatin K07001 K07001; NTE family protein D Cthe_0532 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Cthe_2184 ribonuclease BN K07058 K07058; membrane protein D Cthe_0331 hypothetical protein K04750 phnB; PhnB protein D Cthe_1481 X-X-X-Leu-X-X-Gly heptad repeat-containing protein K01421 yhgE; putative membrane protein D Cthe_2510 protein of unknown function DUF368 K08974 K08974; putative membrane protein C 99997 Function unknown D Cthe_0003 Ankyrin K06867 K06867; uncharacterized protein D Cthe_0906 Radical SAM domain protein K06871 K06871; uncharacterized protein D Cthe_0399 protein of unknown function DUF477 K06872 K06872; uncharacterized protein D Cthe_2420 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein D Cthe_0291 hypothetical protein K06888 K06888; uncharacterized protein D Cthe_2214 hypothetical protein K06889 K06889; uncharacterized protein D Cthe_0284 protein of unknown function DUF815 K06923 K06923; uncharacterized protein D Cthe_2077 CoA-binding domain protein K06929 K06929; uncharacterized protein D Cthe_1506 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Cthe_0768 nucleic acid binding protein K06960 K06960; uncharacterized protein D Cthe_0570 peptidase membrane zinc metallopeptidase K06973 K06973; uncharacterized protein D Cthe_1480 hypothetical protein K07003 K07003; uncharacterized protein D Cthe_0219 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein D Cthe_2586 amidohydrolase 2 K07045 K07045; uncharacterized protein D Cthe_1291 amidohydrolase 2 K07045 K07045; uncharacterized protein D Cthe_2036 amidohydrolase 2 K07045 K07045; uncharacterized protein D Cthe_1620 PilT protein domain protein K07063 K07063; uncharacterized protein D Cthe_0028 hypothetical protein K07074 K07074; uncharacterized protein D Cthe_0236 aldo/keto reductase K07079 K07079; uncharacterized protein D Cthe_1109 permease K07089 K07089; uncharacterized protein D Cthe_1214 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Cthe_1215 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Cthe_2580 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Cthe_2169 metallophosphoesterase K07098 K07098; uncharacterized protein D Cthe_1896 metallophosphoesterase K07098 K07098; uncharacterized protein D Cthe_0218 metallophosphoesterase K07098 K07098; uncharacterized protein D Cthe_2738 metallophosphoesterase K07099 K07099; uncharacterized protein D Cthe_1164 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K07137 K07137; uncharacterized protein D Cthe_1546 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 K07138; uncharacterized protein D Cthe_0370 conserved hypothetical protein K07139 K07139; uncharacterized protein D Cthe_2368 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Cthe_1347 GatB/YqeY domain protein K09117 K09117; uncharacterized protein D Cthe_2746 protein of unknown function DUF402 K09145 K09145; uncharacterized protein D Cthe_1509 protein of unknown function DUF438 K09155 K09155; uncharacterized protein D Cthe_0410 protein of unknown function DUF711 K09157 K09157; uncharacterized protein D Cthe_0905 metal dependent phosphohydrolase K09163 K09163; uncharacterized protein D Cthe_1503 hypothetical protein K09700 K09700; uncharacterized protein D Cthe_0569 protein of unknown function DUF116 K09729 K09729; uncharacterized protein D Cthe_0498 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Cthe_3178 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Cthe_2410 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Cthe_0584 protein of unknown function DUF503 K09764 K09764; uncharacterized protein D Cthe_1061 Protein of unknown function DUF2225 K09766 K09766; uncharacterized protein D Cthe_2106 protein of unknown function DUF327 K09770 K09770; uncharacterized protein D Cthe_0830 acid phosphatase/vanadium-dependent haloperoxidase related protein K09775 K09775; uncharacterized protein D Cthe_1944 protein of unknown function DUF458 K09776 K09776; uncharacterized protein D Cthe_2074 protein of unknown function DUF378 K09779 K09779; uncharacterized protein D Cthe_1204 sporulation protein YhbH K09786 K09786; uncharacterized protein D Cthe_0771 helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein D Cthe_2676 GumN family protein K09973 K09973; uncharacterized protein D Cthe_0242 hypothetical protein K01163 K01163; uncharacterized protein D Cthe_0161 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein D Cthe_3001 putative phosphate transport regulator K07220 K07220; uncharacterized protein D Cthe_0993 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 15, 2024