+D GENES KO
#
KEGG Orthology (KO) - Synechococcus sp. JA-2-3B'a(2-13)
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cyb00010]
D CYB_0974 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CYB_2919 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CYB_2199 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CYB_1986 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CYB_2257 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D CYB_0357 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CYB_2157 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CYB_1429 gap-1; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CYB_1704 gap-2; glyceraldehyde-3-phosphate dehydrogenase, type I K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D CYB_1693 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CYB_2684 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CYB_2531 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CYB_2384 pyruvate kinase barrel domain protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYB_1545 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYB_1115 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CYB_0299 dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CYB_1765 dehydrogenase, E1 component, beta subunit, putative K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CYB_1116 2-oxo acid dehydrogenase, acyltransferase, putative K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CYB_0749 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYB_2165 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYB_0241 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CYB_2304 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:cyb00020]
D CYB_1908 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D CYB_1587 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CYB_1678 isopropylmalate/isohomocitrate dehydrogenase family protein K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D CYB_0749 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYB_2127 succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CYB_2507 succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CYB_1348 succinate/fumarate oxidoreductase, putative K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CYB_0526 aspartate ammonia-lyase, putative K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CYB_0299 dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CYB_1765 dehydrogenase, E1 component, beta subunit, putative K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CYB_1116 2-oxo acid dehydrogenase, acyltransferase, putative K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cyb00030]
D CYB_2919 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CYB_1985 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CYB_2885 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CYB_2481 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CYB_2047 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CYB_1119 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CYB_1112 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CYB_2038 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CYB_1145 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D CYB_2558 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CYB_1353 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CYB_2304 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYB_1652 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CYB_1899 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CYB_0357 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CYB_1986 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CYB_2257 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D CYB_2199 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cyb00040]
D CYB_1930 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CYB_2047 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CYB_0816 carbohydrate kinase, FGGY family K22935 XK1; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:cyb00051]
D CYB_2162 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CYB_2283 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CYB_0688 mannose-6-phosphate isomerase family protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CYB_1549 nucleotidyl transferase family protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CYB_2123 nucleotidyl transferase family protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CYB_1095 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CYB_1556 NAD dependent epimerase/dehydratase family protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CYB_2388 mannosyl-3-phosphoglycerate phosphatase family protein K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D CYB_2199 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CYB_1986 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CYB_2257 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D CYB_0357 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CYB_2157 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:cyb00052]
D CYB_2304 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYB_0974 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CYB_2199 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CYB_1375 glycosyl hydrolase, family 31 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D CYB_1930 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:cyb00500]
D CYB_1375 glycosyl hydrolase, family 31 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CYB_0668 glycosyl hydrolase domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CYB_1067 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CYB_0646 glgA-1; glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D CYB_1734 glgA-2; glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D CYB_1978 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CYB_0647 glycosyl hydrolase, family 57 K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CYB_2688 glgP; alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CYB_0632 alpha-glucan phosphorylase, putative K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CYB_0677 trehalose synthase/putative maltokinase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D CYB_1490 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CYB_2158 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D CYB_2529 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D CYB_2304 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYB_0974 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CYB_2919 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CYB_2162 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cyb00520]
D CYB_2338 glycosyl hydrolase domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CYB_2162 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CYB_1089 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CYB_2635 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CYB_1018 glucokinase regulator-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D CYB_1990 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D CYB_0095 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CYB_1560 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CYB_2112 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CYB_1929 NAD-dependent epimerase/dehydratase family protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D CYB_2194 galE; UDP-glucose 4-epimerase K12448 UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5]
D CYB_0974 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CYB_2304 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYB_1930 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CYB_0060 putative UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D CYB_2919 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CYB_2283 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CYB_0688 mannose-6-phosphate isomerase family protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CYB_1549 nucleotidyl transferase family protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CYB_2123 nucleotidyl transferase family protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CYB_1095 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CYB_1556 NAD dependent epimerase/dehydratase family protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CYB_1067 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cyb00620]
D CYB_0299 dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CYB_1765 dehydrogenase, E1 component, beta subunit, putative K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CYB_1116 2-oxo acid dehydrogenase, acyltransferase, putative K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CYB_0749 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYB_0245 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CYB_0241 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CYB_1384 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CYB_2384 pyruvate kinase barrel domain protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYB_1545 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYB_2755 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CYB_0436 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CYB_1391 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CYB_2665 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CYB_0710 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CYB_2165 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYB_0151 glyoxalase II family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CYB_0613 malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CYB_0526 aspartate ammonia-lyase, putative K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CYB_1842 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CYB_1115 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CYB_1442 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CYB_1307 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CYB_0424 nifV; homocitrate synthase 1 K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cyb00630]
D CYB_1908 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D CYB_1587 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CYB_2846 glcD; glycolate oxidase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CYB_2695 FAD-binding protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D CYB_2175 glycolate oxidase, iron-sulfur subunit, putative K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D CYB_2579 cbbL; ribulose bisphosphate carboxylase, large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D CYB_2577 cbbS; ribulose bisphosphate carboxylase, small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D CYB_1253 gltS; ferredoxin-dependent glutamate synthase K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D CYB_2804 glnA-2; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYB_2810 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CYB_0137 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CYB_1141 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CYB_0749 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYB_0348 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CYB_1607 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CYB_1899 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CYB_2447 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:cyb00640]
D CYB_1384 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CYB_0749 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYB_0245 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CYB_2755 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CYB_0436 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CYB_1391 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CYB_2665 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CYB_2128 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CYB_1587 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CYB_2165 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:cyb00650]
D CYB_0241 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CYB_2127 succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CYB_2507 succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CYB_1348 succinate/fumarate oxidoreductase, putative K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CYB_1893 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CYB_0245 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CYB_2144 putative acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYB_0648 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYB_0971 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cyb00660]
D CYB_2144 putative acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYB_0648 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYB_0971 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CYB_0327 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CYB_2021 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CYB_1631 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cyb00562]
D CYB_1862 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CYB_2170 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CYB_2157 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cyb00190]
D CYB_0870 NADH-ubiquinone/plastoquinone oxidoreductase, subunit 1 family K05572 ndhA; NAD(P)H-quinone oxidoreductase subunit 1 [EC:7.1.1.2]
D CYB_1471 NADH-ubiquinone/plastoquinone oxidoreductase, B subunit K05573 ndhB; NAD(P)H-quinone oxidoreductase subunit 2 [EC:7.1.1.2]
D CYB_2332 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K05574 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 [EC:7.1.1.2]
D CYB_2004 NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D CYB_1811 NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D CYB_2876 NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D CYB_0298 NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D CYB_1278 NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4L family K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D CYB_1812 NAD(P)H dehydrogenase, subunit NdhF3 family K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2]
D CYB_2875 NAD(P)H dehydrogenase, subunit NdhF3 family K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2]
D CYB_0115 NADH-ubiquinone/plastoquinone oxidoreductase, F subunit K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2]
D CYB_1279 NADH-ubiquinone/plastoquinone oxidoreductase, subunit 6 K05578 ndhG; NAD(P)H-quinone oxidoreductase subunit 6 [EC:7.1.1.2]
D CYB_0872 NADH-ubiquinone/plastoquinone oxidoreductase, H subunit K05579 ndhH; NAD(P)H-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CYB_0869 NADH-ubiquinone/plastoquinone oxidoreductase, I subunit K05580 ndhI; NAD(P)H-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CYB_2334 NADH-ubiquinone/plastoquinone oxidoreductase, J subunit K05581 ndhJ; NAD(P)H-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CYB_2333 NADH-ubiquinone/plastoquinone oxidoreductase, K subunit K05582 ndhK; NAD(P)H-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CYB_2375 hypothetical protein K05583 ndhL; NAD(P)H-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CYB_0644 conserved hypothetical protein K05584 ndhM; NAD(P)H-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CYB_2627 conserved hypothetical protein K05585 ndhN; NAD(P)H-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CYB_2711 pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CYB_2127 succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CYB_2507 succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CYB_1348 succinate/fumarate oxidoreductase, putative K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CYB_0660 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CYB_2700 ctaE; cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CYB_2698 ctaD; cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CYB_2697 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CYB_0661 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CYB_1208 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CYB_1209 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CYB_2673 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CYB_2502 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CYB_2672 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CYB_2674 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CYB_2222 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CYB_2679 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CYB_2675 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CYB_2676 ATP synthase F0, B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CYB_2677 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CYB_2243 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CYB_2082 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis [PATH:cyb00195]
D CYB_0371 psbA-2; photosystem II protein D1 K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D CYB_0216 psbA-1; photosystem II protein D1 K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D CYB_0433 psbA-3; photosystem II protein D1 K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D CYB_0281 psbB; photosystem II P680 chlorophyll A apoprotein K02704 psbB; photosystem II CP47 chlorophyll apoprotein
D CYB_2266 photosystem II protein, PsbB/PsbC family K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D CYB_0853 psbC; photosystem II 44 kDa subunit reaction center protein K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D CYB_2268 photosystem II protein, PsbB/PsbC family K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D CYB_0854 psbD-1; photosystem II protein D2 K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D CYB_1736 psbD-2; photosystem II protein D2 K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D CYB_1495 psbE; cytochrome b559, alpha subunit K02707 psbE; photosystem II cytochrome b559 subunit alpha
D CYB_1496 psbF; cytochrome b559, beta subunit K02708 psbF; photosystem II cytochrome b559 subunit beta
D CYB_1373 psbH; photosystem II reaction center protein PsbH K02709 psbH; photosystem II PsbH protein
D CYB_2458 psbI; photosystem II reaction center protein PsbI K02710 psbI; photosystem II PsbI protein
D CYB_1498 psbJ; photosystem II reaction center protein PsbJ K02711 psbJ; photosystem II PsbJ protein
D CYB_0104 psbK; photosystem II reaction center protein PsbK K02712 psbK; photosystem II PsbK protein
D CYB_1497 psbL; photosystem II reaction center protein PsbL K02713 psbL; photosystem II PsbL protein
D CYB_1551 psbO; photosystem II manganese-stabilizing protein K02716 psbO; photosystem II oxygen-evolving enhancer protein 1
D CYB_0129 psbP; photosystem II oxygen evolving complex protein PsbP K02717 psbP; photosystem II oxygen-evolving enhancer protein 2
D CYB_0282 psbT; photosystem II reaction center protein PsbT K02718 psbT; photosystem II PsbT protein
D CYB_0136 psbU; photosystem II 12 kDa extrinsic protein PsbU K02719 psbU; photosystem II PsbU protein
D CYB_2539 cytochrome, putative K02720 psbV; photosystem II cytochrome c550
D CYB_2537 cytochrome c550 K02720 psbV; photosystem II cytochrome c550
D CYB_0812 psbX; photosystem II reaction center protein PsbX K02722 psbX; photosystem II PsbX protein
D CYB_0673 psbY; photosystem II protein PsbY K02723 psbY; photosystem II PsbY protein
D CYB_2057 YCF9, conserved hypothetical protein K02724 psbZ; photosystem II PsbZ protein
D CYB_0963 putative photosystem II protein K08902 psb27; photosystem II Psb27 protein
D CYB_1606 psbW; photosystem II reaction center protein PsbW K08903 psb28; photosystem II 13kDa protein
D CYB_0022 psaA; photosystem I core protein PsaA K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12]
D CYB_0021 psaB; photosystem I core protein PsaB K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12]
D CYB_0549 psaC; photosystem I iron-sulfur center, subunit VII K02691 psaC; photosystem I iron-sulfur center [EC:1.97.1.12]
D CYB_2253 psaD; photosystem I reaction center subunit II K02692 psaD; photosystem I subunit II
D CYB_1245 psaE; photosystem I reaction center subunit IV K02693 psaE; photosystem I subunit IV
D CYB_2824 psaF; photosystem I reaction center subunit III K02694 psaF; photosystem I subunit III
D CYB_1500 psaI; photosystem I reaction center subunit VIII K02696 psaI; photosystem I subunit VIII
D CYB_2825 psaJ; photosystem I reaction center subunit IX K02697 psaJ; photosystem I subunit IX
D CYB_0103 psaK; photosystem I reaction center protein PsaK K02698 psaK; photosystem I subunit X
D CYB_1499 psaL-1; photosystem I reaction center subunit XI K02699 psaL; photosystem I subunit XI
D CYB_2826 psaL-2; photosystem I reaction center subunit XI K02699 psaL; photosystem I subunit XI
D CYB_2809 psaM; photosystem I reaction center subunit XII K02700 psaM; photosystem I subunit XII
D CYB_1621 petA; apocytochrome F K02634 petA; apocytochrome f
D CYB_1629 petB; cytochrome b6 K02635 petB; cytochrome b6
D CYB_1622 petC; cytochrome b6-f complex, iron-sulfur subunit K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D CYB_2623 iron-sulfur cluster-binding protein, Rieske family K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D CYB_1630 petD; cytochrome b6-f complex, subunit IV K02637 petD; cytochrome b6-f complex subunit 4
D CYB_2426 petG; cytochrome b6-f complex, subunit V K02640 petG; cytochrome b6-f complex subunit 5
D CYB_0855 petM; cytochrome b6-f complex, subunit VII K02643 petM; cytochrome b6-f complex subunit 7
D CYB_1803 petE; plastocyanin K02638 petE; plastocyanin
D CYB_2282 ferredoxin, 2Fe-2S K02639 petF; ferredoxin
D CYB_1598 ferredoxin, 2Fe-2S K02639 petF; ferredoxin
D CYB_0405 ferredoxin, 2Fe-2S K02639 petF; ferredoxin
D CYB_2831 ferredoxin, 2Fe-2S K02639 petF; ferredoxin
D CYB_2882 petH; ferredoxin--NADP reductase K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2]
D CYB_1519 petJ; cytochrome c6 K08906 petJ; cytochrome c6
D CYB_2222 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CYB_2502 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CYB_2672 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CYB_2673 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CYB_2674 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CYB_2675 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CYB_2676 ATP synthase F0, B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CYB_2677 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CYB_2679 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
C 00196 Photosynthesis - antenna proteins [PATH:cyb00196]
D CYB_1438 apcA; allophycocyanin, alpha subunit K02092 apcA; allophycocyanin alpha subunit
D CYB_1439 apcB-1; allophycocyanin, beta subunit K02093 apcB; allophycocyanin beta subunit
D CYB_1440 apcC; phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core K02094 apcC; phycobilisome core linker protein
D CYB_0186 apcD; allophycocyanin alpha, B subunit K02095 apcD; allophycocyanin-B
D CYB_0431 putative phycobilisome 120 kDa linker polypeptide, core K02096 apcE; phycobilisome core-membrane linker protein
D CYB_2211 apcB-2; allophycocyanin, beta subunit K02097 apcF; phycobilisome core component
D CYB_2738 cpcA-2; phycocyanin, alpha subunit K02284 cpcA; phycocyanin alpha chain
D CYB_0940 cpcA-1; phycocyanin, alpha subunit K02284 cpcA; phycocyanin alpha chain
D CYB_2740 cpcB-2; phycocyanin, beta subunit K02285 cpcB; phycocyanin beta chain
D CYB_0939 cpcB-1; phycocyanin, beta subunit K02285 cpcB; phycocyanin beta chain
D CYB_2737 cpcC; phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod K02286 cpcC; phycocyanin-associated rod linker protein
D CYB_0941 cpcD; phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod K02287 cpcD; phycocyanin-associated, rod
D CYB_0170 CpcD/allophycocyanin linker domain protein K02287 cpcD; phycocyanin-associated, rod
D CYB_2736 cpcE-2; phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit K02288 cpcE; phycocyanobilin lyase subunit alpha [EC:4.4.1.32]
D CYB_0942 cpcE-1; phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit K02288 cpcE; phycocyanobilin lyase subunit alpha [EC:4.4.1.32]
D CYB_0943 cpcF; phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit K02289 cpcF; phycocyanobilin lyase subunit beta [EC:4.4.1.32]
D CYB_0944 cpcG1; phycobilisome rod-core linker polypeptide cpcG1 K02290 cpcG; phycobilisome rod-core linker protein
D CYB_0568 putative phycobilisome linker polypeptide K05378 cpeC; phycoerythrin-associated linker protein
D CYB_2841 CpeS-like protein K05382 cpeS; phycoerythrin-associated linker protein
C 00710 Carbon fixation in photosynthetic organisms [PATH:cyb00710]
D CYB_2579 cbbL; ribulose bisphosphate carboxylase, large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D CYB_2577 cbbS; ribulose bisphosphate carboxylase, small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D CYB_1693 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CYB_1429 gap-1; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CYB_1704 gap-2; glyceraldehyde-3-phosphate dehydrogenase, type I K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D CYB_0357 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CYB_1986 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CYB_2257 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D CYB_1119 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CYB_2038 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CYB_2883 prk; phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D CYB_0441 phosphoribulokinase/uridine kinase family protein K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D CYB_2157 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CYB_2047 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CYB_1842 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cyb00680]
D CYB_2810 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CYB_2531 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CYB_1842 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CYB_0357 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CYB_1986 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CYB_2257 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D CYB_2199 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CYB_1384 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CYB_1115 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CYB_2684 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CYB_1383 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CYB_0287 comB; 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:cyb00910]
D CYB_0035 nrtA; nitrate ABC transporter, periplasmic nitrate-binding protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CYB_0036 ntrB-1; nitrate ABC transporter, permease protein NrtB K15577 nrtB; nitrate/nitrite transport system permease protein
D CYB_0037 ntrC-1; nitrate ABC transporter, ATP-binding protein NtrC K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D CYB_0038 ntrD; nitrate ABC transporter, ATP-binding protein NtrD K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D CYB_0040 narB; nitrate reductase K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2]
D CYB_0034 nirA; ferredoxin-nitrite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D CYB_0422 nifD; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CYB_0423 nifK; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CYB_0421 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CYB_2804 glnA-2; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYB_1253 gltS; ferredoxin-dependent glutamate synthase K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
C 00920 Sulfur metabolism [PATH:cyb00920]
D CYB_0239 sbp; sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CYB_0237 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CYB_0236 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CYB_0238 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CYB_2096 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CYB_1070 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CYB_1417 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CYB_0444 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CYB_0438 cysH; phosophoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CYB_0180 sir; sulfite reductase, ferredoxin dependent K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D CYB_2710 rhdA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CYB_2852 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CYB_1982 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CYB_2913 putative homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cyb00061]
D CYB_2755 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CYB_0436 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CYB_1391 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CYB_2665 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CYB_1665 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CYB_2339 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CYB_2340 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CYB_1666 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CYB_2090 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CYB_2786 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CYB_1160 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CYB_2181 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cyb00071]
D CYB_2181 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYB_0241 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cyb00561]
D CYB_1607 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CYB_2341 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CYB_0321 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CYB_1706 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CYB_1901 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CYB_1788 glycosyl transferase, group 2 family protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D CYB_1779 oxidoreductase, short chain dehydrogenase/reductase family K20024 mgdE; monoglucosyldiacylglycerol epimerase [EC:5.1.3.34]
D CYB_0060 putative UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:cyb00564]
D CYB_0350 NAD-dependent glycerol-3-phosphate dehydrogenase family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CYB_0321 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CYB_1706 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CYB_1901 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CYB_2183 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CYB_0300 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CYB_0492 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cyb00230]
D CYB_0536 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CYB_2304 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYB_1652 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CYB_2131 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CYB_0043 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CYB_0901 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CYB_2807 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CYB_0285 purS; phosphoribosylformylglycinamidine synthase, PurS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CYB_0284 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CYB_1656 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CYB_1214 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CYB_1031 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CYB_1784 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CYB_1918 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CYB_2851 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CYB_2813 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CYB_0274 5'-nucleotidase domain/Ser/Thr protein phosphatase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CYB_1427 surE-2; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CYB_0884 surE-1; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CYB_0345 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CYB_1616 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CYB_0270 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CYB_0830 rdgB; non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CYB_1271 oxidoreductase, molybdopterin-binding subunit K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D CYB_2747 hydrolase, NUDIX family K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D CYB_1168 guaA; GMP synthase, glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CYB_0056 guanylate kinase, putative K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CYB_0734 nrdJ; ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent, intein containing K00524 nrdJ; ribonucleotide reductase, class II [EC:1.17.4.2]
D CYB_1543 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CYB_1493 putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CYB_2200 adenylate cyclase, putative K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CYB_0179 iron-sulfur cluster-binding protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CYB_0079 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CYB_2006 adenosine deaminase, putative K01488 add; adenosine deaminase [EC:3.5.4.4]
D CYB_2932 2`,3`-cyclic-nucleotide 2`-phosphodiesterase, putative K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CYB_2616 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CYB_0131 icc; icc protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D CYB_0437 Ser/Thr protein phosphatase family protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D CYB_1417 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CYB_1070 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CYB_2111 hypothetical protein K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D CYB_0023 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CYB_2370 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:cyb00240]
D CYB_0215 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CYB_1236 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CYB_1917 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CYB_2522 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CYB_1021 dihydroorotase, putative K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CYB_2280 pyrD; dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CYB_1487 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CYB_0343 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CYB_2292 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CYB_0270 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CYB_0709 maf; septum formation protein MaF K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CYB_2747 hydrolase, NUDIX family K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D CYB_1478 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CYB_2425 panC_cmk; pantoate--beta-alanine ligase/cytidylate kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D CYB_0274 5'-nucleotidase domain/Ser/Thr protein phosphatase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CYB_1427 surE-2; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CYB_0884 surE-1; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CYB_2389 upp-2; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CYB_1933 upp-1; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CYB_2433 pyrR; pyrR bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CYB_2932 2`,3`-cyclic-nucleotide 2`-phosphodiesterase, putative K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CYB_1063 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CYB_0393 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CYB_0734 nrdJ; ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent, intein containing K00524 nrdJ; ribonucleotide reductase, class II [EC:1.17.4.2]
D CYB_1670 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CYB_0832 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CYB_1781 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CYB_0857 oxidoreductase, short chain dehydrogenase/reductase family K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cyb00250]
D CYB_1878 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CYB_2480 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CYB_1038 L-asparaginase, thermolabile K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CYB_2005 asparaginase 2 family protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CYB_1358 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CYB_1752 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CYB_2070 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CYB_0079 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CYB_1918 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CYB_1917 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CYB_1893 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CYB_0516 proline dehydrogenase/1-pyrroline-5 carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CYB_2804 glnA-2; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYB_0215 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CYB_1236 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CYB_0284 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CYB_1089 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CYB_2131 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cyb00260]
D CYB_0217 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CYB_1568 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CYB_1425 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CYB_1902 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CYB_2820 thrC-2; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CYB_2298 thrC-1; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CYB_0540 putative low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CYB_2810 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CYB_1607 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CYB_2684 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CYB_1383 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CYB_0857 oxidoreductase, short chain dehydrogenase/reductase family K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D CYB_2794 putative copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D CYB_0137 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CYB_1141 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CYB_0749 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYB_0348 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CYB_0715 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D CYB_0937 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CYB_1508 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cyb00270]
D CYB_2852 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CYB_1982 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CYB_2208 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CYB_1886 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CYB_2590 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CYB_0057 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CYB_0058 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CYB_1283 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CYB_0345 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CYB_1751 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CYB_0217 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CYB_1568 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CYB_1425 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CYB_0133 conserved hypothetical protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D CYB_2374 iron-sulfur cluster-binding protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D CYB_2913 putative homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CYB_0479 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CYB_1049 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CYB_1878 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CYB_2710 rhdA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CYB_2165 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYB_2315 putative cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D CYB_1383 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:cyb00280]
D CYB_0479 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CYB_0749 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYB_2128 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cyb00290]
D CYB_0327 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CYB_2021 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CYB_1631 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CYB_2144 putative acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYB_0648 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYB_0971 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CYB_1789 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CYB_1987 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CYB_0479 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CYB_1442 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CYB_1307 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cyb00300]
D CYB_1425 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CYB_0217 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CYB_1568 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CYB_0048 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CYB_0924 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CYB_1419 argD; acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CYB_1371 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CYB_1421 aspB; aminotransferase, classes I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CYB_1262 aminotransferase, classes I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CYB_1644 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CYB_0340 aminotransferase, classes I and II K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CYB_1235 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CYB_2039 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cyb00310]
D CYB_0749 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYB_1893 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:cyb00220]
D CYB_0821 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CYB_1752 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CYB_2070 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CYB_0250 amidinotransferase family protein K27542 argZ; arginine dihydrolase [EC:3.5.3.27]
D CYB_0023 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CYB_2370 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D CYB_0284 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CYB_2804 glnA-2; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYB_1878 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CYB_2548 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CYB_1687 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CYB_0289 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CYB_1419 argD; acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cyb00330]
D CYB_1420 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D CYB_1063 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CYB_0393 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CYB_2234 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D CYB_0961 hydantoinase/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D CYB_2779 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CYB_2252 arginase family protein K01480 speB; agmatinase [EC:3.5.3.11]
D CYB_1744 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D CYB_0058 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CYB_0057 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CYB_0250 amidinotransferase family protein K27542 argZ; arginine dihydrolase [EC:3.5.3.27]
D CYB_1749 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CYB_0516 proline dehydrogenase/1-pyrroline-5 carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CYB_0519 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CYB_0553 putative gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CYB_0823 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CYB_0956 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CYB_1878 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cyb00340]
D CYB_1550 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CYB_1100 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CYB_0157 hisIE; histidine biosynthesis bifunctional protein HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CYB_1964 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CYB_0889 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CYB_0445 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CYB_0671 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CYB_0260 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYB_0073 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:cyb00350]
D CYB_1878 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CYB_0260 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYB_0246 4-hydroxyphenylpyruvate dioxygenase, putative K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CYB_2794 putative copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D CYB_0241 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CYB_1893 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CYB_0558 conserved domain protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
C 00360 Phenylalanine metabolism [PATH:cyb00360]
D CYB_2794 putative copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D CYB_1878 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CYB_0260 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYB_0246 4-hydroxyphenylpyruvate dioxygenase, putative K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CYB_0558 conserved domain protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
C 00380 Tryptophan metabolism
D CYB_0749 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cyb00400]
D CYB_1407 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CYB_1570 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CYB_2912 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CYB_1737 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CYB_1326 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CYB_1511 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CYB_0535 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CYB_2417 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CYB_0050 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CYB_0194 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CYB_2343 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CYB_0937 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CYB_1508 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CYB_1839 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D CYB_0624 tyrA; prephenate dehydrogenase K15226 tyrAa; arogenate dehydrogenase (NADP+) [EC:1.3.1.78]
D CYB_0653 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CYB_1878 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CYB_0260 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cyb00410]
D CYB_2794 putative copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D CYB_2425 panC_cmk; pantoate--beta-alanine ligase/cytidylate kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D CYB_2128 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
C 00430 Taurine and hypotaurine metabolism [PATH:cyb00430]
D CYB_2091 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CYB_1358 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CYB_1384 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:cyb00440]
D CYB_0164 phnI; phosphonate metabolism protein PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D CYB_0162 putative phosphonate metabolism protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D CYB_0163 phnH; phosphonate metabolism protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D CYB_0167 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D CYB_0168 putative phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D CYB_0165 phnJ; phosphonate metabolism protein PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
C 00450 Selenocompound metabolism [PATH:cyb00450]
D CYB_2208 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CYB_1886 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CYB_1997 cysteine desulfurase, SufS family K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CYB_2806 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CYB_0325 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CYB_1070 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CYB_1184 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CYB_2229 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cyb00460]
D CYB_0668 glycosyl hydrolase domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CYB_2091 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CYB_1038 L-asparaginase, thermolabile K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CYB_2005 asparaginase 2 family protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CYB_2810 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cyb00470]
D CYB_0655 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CYB_2109 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CYB_0284 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CYB_0359 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CYB_0292 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CYB_2146 conserved hypothetical protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D CYB_2145 mandelate racemase/muconate lactonizing enzyme family protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D CYB_1371 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CYB_1644 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cyb00480]
D CYB_2091 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CYB_1049 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CYB_1818 peptidase, M17 (leucyl aminopeptidase) family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CYB_1266 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CYB_2481 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CYB_1985 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CYB_0058 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cyb00515]
D CYB_0649 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cyb00514]
D CYB_0468 TPR domain protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CYB_0476 methyltransferase, FkbM family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CYB_1256 TPR domain protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CYB_0649 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:cyb00540]
D CYB_2787 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CYB_2785 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CYB_1289 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CYB_2789 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
C 00542 O-Antigen repeat unit biosynthesis [PATH:cyb00542]
D CYB_2811 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cyb00541]
D CYB_1930 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CYB_2283 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CYB_0688 mannose-6-phosphate isomerase family protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CYB_1095 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CYB_1556 NAD dependent epimerase/dehydratase family protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CYB_2635 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CYB_2112 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:cyb00550]
D CYB_0095 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CYB_1560 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CYB_1559 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CYB_0292 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CYB_1235 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CYB_2109 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CYB_2039 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CYB_1646 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CYB_2055 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CYB_1146 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CYB_2152 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CYB_0895 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CYB_0996 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CYB_1246 penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D CYB_2287 putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CYB_2519 conserved hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CYB_1058 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:cyb00552]
D CYB_2055 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CYB_2811 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CYB_1888 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CYB_1001 putative cell envelope-related function transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cyb00543]
D CYB_2811 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CYB_2852 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cyb00730]
D CYB_0278 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CYB_2833 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CYB_0419 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYB_1648 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYB_2393 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D CYB_1983 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CYB_2395 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CYB_1815 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CYB_1867 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CYB_2937 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CYB_1198 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CYB_2616 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CYB_2439 transcriptional activator TenA, putative K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:cyb00740]
D CYB_2077 ribAB; riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CYB_1847 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CYB_1002 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CYB_1738 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CYB_2202 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CYB_2096 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CYB_0536 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CYB_0223 decarboxylase, polyprenyl P-hydroxybenzoate/phenylacrylic acid family K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:cyb00750]
D CYB_0092 pyridoxamine 5'-phosphate oxidase family protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CYB_0455 pdxJ; pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CYB_2820 thrC-2; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CYB_2298 thrC-1; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cyb00760]
D CYB_2480 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CYB_2482 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CYB_2483 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CYB_1096 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CYB_0274 5'-nucleotidase domain/Ser/Thr protein phosphatase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CYB_1427 surE-2; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CYB_0884 surE-1; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CYB_0547 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CYB_1248 nadE; NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CYB_2378 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CYB_0465 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CYB_1893 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cyb00770]
D CYB_2144 putative acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYB_0648 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CYB_0971 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CYB_1789 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CYB_1987 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CYB_0701 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CYB_2432 panE-2; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CYB_0856 panE-1; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CYB_2425 panC_cmk; pantoate--beta-alanine ligase/cytidylate kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D CYB_1510 transcriptional activator, putative, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CYB_0983 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CYB_2196 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CYB_1306 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CYB_1000 4'-phosphopantetheinyl transferase family protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CYB_0479 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:cyb00780]
D CYB_1666 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CYB_2090 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CYB_2786 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CYB_1160 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CYB_0457 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cyb00785]
D CYB_1921 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CYB_1117 lipA-1; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CYB_2905 lipA-2; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CYB_1281 biotin/lipoate A/B protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CYB_0749 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYB_0299 dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CYB_1765 dehydrogenase, E1 component, beta subunit, putative K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CYB_1116 2-oxo acid dehydrogenase, acyltransferase, putative K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CYB_0137 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CYB_1141 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CYB_0348 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cyb00790]
D CYB_0188 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CYB_1198 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CYB_0684 phoD; alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CYB_1408 folB-1; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CYB_2921 folB-2; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CYB_2920 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CYB_2922 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CYB_1382 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CYB_2077 ribAB; riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CYB_0675 putative 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CYB_2873 putative pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CYB_2799 moaA; molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CYB_2860 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CYB_2203 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CYB_2593 molybdenum cofactor biosynthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CYB_0206 moeA; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CYB_0928 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CYB_0375 putative molybdopterin-guanine dinucleotide biosynthesis protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cyb00670]
D CYB_0090 folD; FolD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CYB_2810 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CYB_0901 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CYB_2851 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CYB_1993 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CYB_1141 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CYB_2208 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CYB_1781 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CYB_2447 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CYB_0923 methylenetetrahydrofolate reductase family protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CYB_0394 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cyb00860]
D CYB_1680 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYB_2258 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CYB_1012 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CYB_2456 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CYB_1786 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CYB_1861 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CYB_2837 hemF; coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D CYB_1424 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D CYB_2857 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CYB_0566 cobA_hemD; uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CYB_1040 cobA; uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CYB_0660 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CYB_0661 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CYB_2347 cbiX; sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CYB_1039 cbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CYB_2189 cobI; precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D CYB_0397 cbiG_cobJ; cbiG protein/precorrin-3B C17-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D CYB_2708 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CYB_0118 cobK; precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CYB_2767 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D CYB_0227 cbiE_cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiE/T subunits K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D CYB_0362 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D CYB_0225 cobH-1; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CYB_0379 cobH-2; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CYB_2586 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CYB_1111 CobN/magnesium chelatase domain protein K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D CYB_0304 CobN/magnesium chelatase domain protein K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D CYB_1671 putative cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CYB_2588 cobO-2; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CYB_2316 cobO-1; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CYB_2173 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CYB_2498 cobD-2; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CYB_0367 cobU; cobinamide kinase/cobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CYB_2204 cobS; cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CYB_0908 chlH; magnesium chelatase, H subunit K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D CYB_0714 chlD; magnesium chelatase, ATPase subunit D K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D CYB_0107 chlI; magnesium chelatase, ATPase subunit I K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D CYB_2107 chlM; magnesium protoporphyrin O-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D CYB_1254 acsF; magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D CYB_1261 coenzyme F420 hydrogenase/dehydrogenase family protein K21231 bciB; 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin) [EC:1.3.7.13]
D CYB_1015 light-dependent protochlorophyllide reductase K00218 por; protochlorophyllide reductase [EC:1.3.1.33]
D CYB_1016 chlL; light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D CYB_1013 chlN; light-independent protochlorophyllide reductase, N subunit K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D CYB_2193 chlB; light-independent protochlorophyllide reductase, B subunit K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D CYB_0533 chlG; chlorophyll synthase, ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D CYB_1761 chlP; geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D CYB_1448 pyridoxamine 5'-phosphate oxidase family protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D CYB_2435 heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D CYB_1431 oxidoreductase, NAD-binding K00214 BLVRA; biliverdin reductase [EC:1.3.1.24]
D CYB_0698 pcyA; phycocyanobilin:ferredoxin oxidoreductase K05371 pcyA; phycocyanobilin:ferredoxin oxidoreductase [EC:1.3.7.5]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cyb00130]
D CYB_2573 conserved hypothetical protein K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D CYB_2854 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CYB_2891 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D CYB_0223 decarboxylase, polyprenyl P-hydroxybenzoate/phenylacrylic acid family K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CYB_0978 putative 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D CYB_0780 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D CYB_2299 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D CYB_2045 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CYB_0729 menC; O-succinylbenzoate synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D CYB_2428 menE; O-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CYB_0565 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CYB_2300 menA; 1,4-dihydroxy-2-naphthoate phytyltransferase K23094 ABC4; 2-carboxy-1,4-naphthoquinone phytyltransferase [EC:2.5.1.130]
D CYB_1748 pyridine nucleotide-disulfide oxidoreductase K17872 NDC1; demethylphylloquinone reductase [EC:1.6.5.12]
D CYB_0364 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K23095 MENG; demethylphylloquinol methyltransferase [EC:2.1.1.329]
D CYB_0246 4-hydroxyphenylpyruvate dioxygenase, putative K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CYB_0976 cyclopropane-fatty-acyl-phospholipid synthase family protein K18534 K18534; MPBQ/MSBQ methyltransferase [EC:2.1.1.295]
D CYB_2237 prenyltransferase, UbiA family K09833 HPT; homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:2.5.1.115 2.5.1.116]
D CYB_0605 putative tocopherol cyclase K09834 VTE1; tocopherol cyclase [EC:5.5.1.24]
D CYB_2403 cyclopropane-fatty-acyl-phospholipid synthase family protein K05928 E2.1.1.95; tocopherol O-methyltransferase [EC:2.1.1.95]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cyb00900]
D CYB_1983 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CYB_1233 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CYB_2706 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CYB_1390 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CYB_0783 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CYB_0121 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CYB_2643 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CYB_0223 decarboxylase, polyprenyl P-hydroxybenzoate/phenylacrylic acid family K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CYB_2691 fni; isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CYB_1859 crtE; geranylgeranyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CYB_0451 sds; solanesyl diphosphate synthase K05356 SPS; all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]
D CYB_1646 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CYB_1761 chlP; geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cyb00906]
D CYB_1695 crtB; phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CYB_1694 pds; phytoene desaturase K02293 PDS; 15-cis-phytoene desaturase [EC:1.3.5.5]
D CYB_0962 NnrU family protein K15744 Z-ISO; zeta-carotene isomerase [EC:5.2.1.12]
D CYB_1060 zds; carotene 7,8-desaturase K00514 ZDS; zeta-carotene desaturase [EC:1.3.5.6]
D CYB_1298 crtH; carotenoid isomerase K09835 crtISO; prolycopene isomerase [EC:5.2.1.13]
D CYB_0376 conserved hypothetical protein K14605 cruA; lycopene cyclase CruA [EC:5.5.1.19]
D CYB_2530 oxidoreductase, FAD-binding K14606 cruP; lycopene cyclase CruP [EC:5.5.1.19]
D CYB_0102 beta-carotene ketolase, putative K02294 crtR; beta-carotene hydroxylase [EC:1.14.13.-]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CYB_1119 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CYB_2299 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:cyb00946]
D CYB_0668 glycosyl hydrolase domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:cyb00311]
D CYB_1874 cefD; isopenicillin N-epimerase K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
D CYB_0863 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase family protein K19200 IAL; isopenicillin-N N-acyltransferase like protein
D CYB_1894 carboxylesterase, beta-lactamase family K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:cyb00332]
D CYB_0519 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CYB_0553 putative gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CYB_0823 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cyb00261]
D CYB_1070 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CYB_0217 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CYB_1568 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CYB_0048 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CYB_0924 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cyb00521]
D CYB_0974 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CYB_2304 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CYB_1862 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CYB_2170 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CYB_0974 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:cyb00401]
D CYB_1878 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CYB_0260 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CYB_0535 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CYB_2417 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CYB_2339 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CYB_2090 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CYB_1160 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CYB_1665 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cyb00999]
D CYB_2590 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CYB_0668 glycosyl hydrolase domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation [PATH:cyb00627]
D CYB_0710 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CYB_0223 decarboxylase, polyprenyl P-hydroxybenzoate/phenylacrylic acid family K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cyb00625]
D CYB_0241 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CYB_0423 nifK; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CYB_0421 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CYB_0422 nifD; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation [PATH:cyb00791]
D CYB_2659 amidohydrolase, AtzE family K19837 atzE; 1-carboxybiuret hydrolase [EC:3.5.1.131]
D CYB_0796 isochorismatase family protein K23359 biuH; biuret amidohydrolase [EC:3.5.1.84]
D CYB_0023 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CYB_2370 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cyb00626]
D CYB_0241 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cyb03020]
D CYB_2436 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CYB_2437 rpoC1; DNA-directed RNA polymerase, gamma subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CYB_2438 rpoC2; DNA-directed RNA polymerase, beta'' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CYB_1580 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CYB_2308 putative DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cyb03010]
D CYB_2353 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CYB_0847 putative ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CYB_1534 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CYB_2603 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CYB_1094 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CYB_2613 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CYB_1664 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CYB_0919 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CYB_2610 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CYB_1584 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CYB_0922 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CYB_1579 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CYB_0918 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CYB_1578 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CYB_1362 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CYB_0184 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CYB_0448 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CYB_2606 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CYB_1633 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CYB_2601 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CYB_2798 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CYB_1229 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CYB_1222 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CYB_2600 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CYB_2597 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CYB_2598 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CYB_2609 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CYB_2611 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CYB_1224 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CYB_1080 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CYB_1223 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CYB_1221 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CYB_1583 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CYB_2607 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CYB_2614 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CYB_2604 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CYB_1581 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CYB_2612 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CYB_2889 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CYB_2849 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CYB_0742 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CYB_2602 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CYB_2599 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CYB_2608 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CYB_0741 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CYB_1051 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CYB_2605 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CYB_1585 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CYB_0148 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CYB_1634 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CYB_2942 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CYB_2848 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CYB_1577 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CYB_1377 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CYB_1957 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CYB_1954 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CYB_1380 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CYB_1381 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CYB_1953 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cyb00970]
D CYB_1602 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CYB_1379 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CYB_1955 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CYB_0657 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CYB_0606 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CYB_1273 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CYB_1825 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CYB_2796 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CYB_2242 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CYB_1524 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CYB_1809 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CYB_2172 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CYB_2583 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CYB_2473 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CYB_1059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CYB_2097 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CYB_2235 tRNA-His K14226 tRNA-His; tRNA His
D CYB_1378 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CYB_1956 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CYB_0429 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_0880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_0509 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_2379 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_0459 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_1981 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_2218 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CYB_0328 tRNA-Met K14230 tRNA-Met; tRNA Met
D CYB_2288 tRNA-Met K14230 tRNA-Met; tRNA Met
D CYB_0802 tRNA-Met K14230 tRNA-Met; tRNA Met
D CYB_2651 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CYB_1148 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CYB_2027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CYB_1532 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CYB_1717 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CYB_2414 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CYB_2323 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CYB_0700 pseudogene K14233 tRNA-Ser; tRNA Ser
D CYB_2693 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CYB_1642 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CYB_1413 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CYB_2888 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CYB_1643 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CYB_1155 tRNA-Val K14237 tRNA-Val; tRNA Val
D CYB_1615 tRNA-Val K14237 tRNA-Val; tRNA Val
D CYB_0440 tRNA-Val K14237 tRNA-Val; tRNA Val
D CYB_1680 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYB_1605 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CYB_0708 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CYB_2217 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CYB_1521 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CYB_1161 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CYB_0066 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CYB_2517 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CYB_1492 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CYB_1790 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CYB_1821 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CYB_2229 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CYB_1993 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CYB_0301 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CYB_2881 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CYB_1022 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CYB_1514 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CYB_1944 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CYB_1126 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CYB_0694 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CYB_0735 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CYB_2916 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CYB_2511 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CYB_2214 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cyb03060]
D CYB_2615 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CYB_1219 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CYB_2094 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CYB_1758 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CYB_1757 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CYB_2241 oxaA; inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYB_2451 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYB_0262 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CYB_0312 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CYB_1334 arsenite-antimonite (ArsAB) efflux family transporter, ATP-binding protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CYB_1135 ATPase, arsenite-antimonite (ArsAB) efflux transporter family K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CYB_2449 tatA-2; twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CYB_1975 tatA-1; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CYB_0929 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CYB_0452 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CYB_0541 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cyb04122]
D CYB_0419 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYB_1648 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYB_2710 rhdA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CYB_1191 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CYB_2203 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CYB_2799 moaA; molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CYB_1444 moaD; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D CYB_2818 MoaD family protein K03636 moaD; sulfur-carrier protein
D CYB_2074 ThiS domain protein K03636 moaD; sulfur-carrier protein
D CYB_2075 putative molybdopterin biosynthesis protein MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D CYB_2860 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CYB_2593 molybdenum cofactor biosynthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CYB_2394 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:cyb03018]
D CYB_1823 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D CYB_2531 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CYB_1445 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CYB_2525 zam; acetazolamide conferring resistance protein Zam K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CYB_0669 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CYB_0047 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CYB_2934 dnaK-2; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CYB_2781 dnaK-1; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CYB_1618 groL-1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYB_1712 groL-2; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYB_1834 conserved hypothetical protein K03666 hfq; host factor-I protein
D CYB_2082 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cyb03030]
D CYB_1183 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYB_1304 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CYB_1099 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CYB_2699 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CYB_1539 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CYB_1081 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CYB_1520 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CYB_0117 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CYB_1663 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CYB_1340 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CYB_1824 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CYB_1335 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cyb03410]
D CYB_0991 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CYB_2151 base excision DNA repair protein, HhH-GPD family K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CYB_0752 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CYB_2817 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CYB_1244 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CYB_2440 putative uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CYB_2404 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CYB_0231 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CYB_1106 recJ-2; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CYB_0828 recJ-1; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CYB_1335 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cyb03420]
D CYB_1207 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CYB_1196 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CYB_0807 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CYB_1251 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CYB_2100 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYB_1368 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYB_1335 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cyb03430]
D CYB_2731 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CYB_2373 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CYB_2276 putative DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CYB_2100 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYB_1368 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYB_0088 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CYB_0089 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CYB_1106 recJ-2; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CYB_0828 recJ-1; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CYB_0117 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CYB_1663 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CYB_1183 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYB_1539 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CYB_1304 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CYB_2699 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CYB_1099 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CYB_1335 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CYB_2715 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:cyb03440]
D CYB_1106 recJ-2; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CYB_0828 recJ-1; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CYB_0117 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CYB_1663 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CYB_2719 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CYB_2559 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CYB_2895 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CYB_1961 recA; recA protein K03553 recA; recombination protein RecA
D CYB_0546 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CYB_0432 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CYB_0493 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CYB_2808 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CYB_1183 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYB_1539 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CYB_1304 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CYB_2699 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CYB_1099 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CYB_2227 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D CYB_0468 TPR domain protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CYB_0476 methyltransferase, FkbM family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CYB_1256 TPR domain protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cyb02010]
D CYB_0239 sbp; sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CYB_0237 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CYB_0236 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CYB_0238 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CYB_0035 nrtA; nitrate ABC transporter, periplasmic nitrate-binding protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CYB_0036 ntrB-1; nitrate ABC transporter, permease protein NrtB K15577 nrtB; nitrate/nitrite transport system permease protein
D CYB_0037 ntrC-1; nitrate ABC transporter, ATP-binding protein NtrC K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D CYB_0038 ntrD; nitrate ABC transporter, ATP-binding protein NtrD K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D CYB_0604 nitrate/nitrite/cyanate ABC transporter (NitT) family, periplasmic substrate-binding protein K11950 cmpA; bicarbonate transport system substrate-binding protein
D CYB_0603 ntrB-2; nitrate ABC transporter, permease protein K11951 cmpB; bicarbonate transport system permease protein
D CYB_0602 ntrC-2; nitrate ABC transporter, ATP-binding proteins NtrC K11952 cmpC; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D CYB_0601 nitrate ABC transporter, ATP-binding protein NtrD K11953 cmpD; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D CYB_0399 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CYB_0398 modB; molybdate ABC transporter, permease protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CYB_2669 ferric iron uptake ABC transporter (FeT) family, periplasmic substrate binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CYB_2671 ferric iron uptake ABC transporter (FeT) family, permease protein K02011 afuB; iron(III) transport system permease protein
D CYB_0190 ferric iron ABC transporter (FeT) family, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CYB_0505 polyamine transporter, periplasmic polyamine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CYB_2209 potC; spermidine/putrescine ABC transporter, permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D CYB_1299 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D CYB_1301 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CYB_0579 quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D CYB_0581 quaternary amine uptake ABC transporter (QAT) family, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D CYB_0029 quaternary amine ABC transporter (QAT) family, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D CYB_0580 quaternary amine uptake ABC transporter (QAT) family, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CYB_1590 carbohydrate uptake ABC transporter-1 (CUT1) family, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CYB_1087 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CYB_2505 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CYB_1086 mkl; ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CYB_0391 membrane protein, bmp family K07335 bmpA; basic membrane protein A and related proteins
D CYB_1265 conserved hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D CYB_0389 carbohydrate ABC transporter-2 (CUT2) family, permease protein K23535 nupB; general nucleoside transport system permease protein
D CYB_0309 carbohydrate uptake ABC transporter-2 (CUT2) family, permease protein K23535 nupB; general nucleoside transport system permease protein
D CYB_0388 carbohydrate ABC transporter-2 (CUT2) family, permease protein K23536 nupC; general nucleoside transport system permease protein
D CYB_1202 hydrophobic amino acid uptake ABC transporter (HAAT) family, permease protein K23536 nupC; general nucleoside transport system permease protein
D CYB_0390 carbohydrate uptake ABC transporter 2 (CUT2) family, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CYB_1651 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CYB_2477 ugpB; glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CYB_2478 upgA; glycerol-3-phosphate ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CYB_2893 putative sn-glycerol-3-phosphate ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CYB_2551 phosphate uptake transporter (PhoT) ABC transporter family, periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_1915 pstS-2; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_1077 pstS-1; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_2780 pstS-3; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_1914 pstC-2; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CYB_1076 pstC-1; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CYB_1913 pstA-2; phosphate ABC transporter, permease protein PtsA K02038 pstA; phosphate transport system permease protein
D CYB_1075 pstA-1; phosphate ABC transporter, permease protein PtsA K02038 pstA; phosphate transport system permease protein
D CYB_1074 pstB-1; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CYB_1912 pstB-2; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CYB_1465 phnD-2; phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CYB_1466 phnD; phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CYB_0011 putative phosphonate ABC transporter, phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CYB_0160 phnD-1; phosphonate ABC tranporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CYB_1468 phnE-2; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D CYB_1469 phnE-3; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D CYB_0161 phnE-1; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D CYB_1467 phnC-2; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CYB_0159 phnC-1; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CYB_0932 polar amino amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D CYB_0931 polar amino amino acid ABC transporter (PAAT) family, permease protein K09970 aapQ; general L-amino acid transport system permease protein
D CYB_0930 polar amino amino acid ABC transporter (PAAT) family, permease protein K09971 aapM; general L-amino acid transport system permease protein
D CYB_0933 polar amino amino acid ABC transporter (PAAT) family, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CYB_0772 hydrophobic amino acid ABC transporter (HAAT) family, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CYB_2084 hydrophobic amino acid ABC transporter (HAAT) family, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CYB_2083 hydrophobic amino acid ABC transporter (HAAT) family, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CYB_0774 hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CYB_0775 hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CYB_2015 urea ABC transporter, periplasmic urea-binding protein K11959 urtA; urea transport system substrate-binding protein
D CYB_2014 urea ABC transporter, permease protein K11960 urtB; urea transport system permease protein
D CYB_2013 urea ABC transporter, permease protein K11961 urtC; urea transport system permease protein
D CYB_2012 urea ABC transporter, ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D CYB_2011 urea ABC transporter, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D CYB_0144 putative zinc ABC transporter, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CYB_0147 manganese/zinc/iron chelate ABC transporter (MZT) family, permease protein K09816 znuB; zinc transport system permease protein
D CYB_0145 manganese/zinc/iron chelate ABC ransporter (MZT) family, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CYB_2035 putative cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CYB_2036 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CYB_1798 putative cobalt ABC transporter (CoT) family, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CYB_2034 conserved hypothetical protein K16915 cbiL; nickel transport protein
D CYB_2460 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CYB_1048 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CYB_1454 putative transporter K16785 ecfT; energy-coupling factor transport system permease protein
D CYB_2631 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CYB_1898 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CYB_2302 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D CYB_1357 putative membrane protein, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D CYB_2385 putative membrane protein, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D CYB_2383 hydrophobic amino acid uptake transporter (HAAT) ABC transporter family, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CYB_1880 putative permease K09811 ftsX; cell division transport system permease protein
D CYB_1887 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CYB_1234 heavy metal ABC transporter (HMT) family, permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CYB_1689 ABC transporter, permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CYB_0181 peroxisomal fatty acyl CoA ABC transporter (P-FAT) family, transmembrane ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:cyb03070]
D CYB_1272 type IV pilin, putative K02456 gspG; general secretion pathway protein G
D CYB_1758 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CYB_1757 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CYB_1219 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CYB_2094 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CYB_2615 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CYB_2241 oxaA; inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYB_2451 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYB_0312 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CYB_0262 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CYB_2449 tatA-2; twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CYB_1975 tatA-1; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CYB_0929 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cyb02020]
D CYB_0858 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CYB_2856 DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CYB_1198 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CYB_0684 phoD; alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CYB_2551 phosphate uptake transporter (PhoT) ABC transporter family, periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_1915 pstS-2; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_1077 pstS-1; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_2780 pstS-3; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_0661 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CYB_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CYB_1410 sensor histidine kinase K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3]
D CYB_2501 DNA-binding response regulator K11521 manR; two-component system, OmpR family, manganese sensing response regulator
D CYB_2421 sensory box histidine kinase K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D CYB_1895 sasA; adaptive-response sensory histidine kinase SasA K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D CYB_0249 DNA-binding response regulator RpaA K10697 rpaA; two-component system, OmpR family, response regulator RpaA
D CYB_2561 DNA-binding response regulator K11329 rpaB; two-component system, OmpR family, response regulator RpaB
D CYB_1058 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CYB_0584 VanW family protein K18346 vanW; vancomycin resistance protein VanW
D CYB_0613 malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CYB_2704 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CYB_2804 glnA-2; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYB_1936 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D CYB_1935 putative methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D CYB_1939 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D CYB_1938 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D CYB_1937 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D CYB_2751 putative methyl-accepting chemotaxis protein K11525 pixJ; methyl-accepting chemotaxis protein PixJ
D CYB_2750 CheW domain protein K11524 pixI; positive phototaxis protein PixI
D CYB_2752 sensor histidine kinase/response regulator K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D CYB_2748 response regulator K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D CYB_2749 response regulator K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D CYB_0283 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D CYB_2652 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYB_1702 trunctated cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYB_1457 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYB_1208 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CYB_1209 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CYB_0906 low molecular weight phosphotyrosine protein phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CYB_2112 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cyb02024]
D CYB_1834 conserved hypothetical protein K03666 hfq; host factor-I protein
D CYB_0535 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CYB_2417 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CYB_1407 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CYB_1762 polyamine ABC transporter, periplasmic polyamine-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CYB_1464 polyamine/opine/phosphonate uptake ABC transporter family,periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CYB_0027 conserved hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CYB_0545 polyamine/opine/phosphonate uptake ABC transporter (POPT) family, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CYB_0130 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CYB_0132 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CYB_0234 polyamine/opine/phosphonate uptake ABC transporter (POPT) family, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CYB_0024 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CYB_2079 polyamine ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CYB_0772 hydrophobic amino acid ABC transporter (HAAT) family, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CYB_2084 hydrophobic amino acid ABC transporter (HAAT) family, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CYB_2083 hydrophobic amino acid ABC transporter (HAAT) family, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CYB_0774 hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CYB_0775 hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CYB_2181 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYB_2652 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYB_1702 trunctated cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYB_1457 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYB_1847 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CYB_1885 peptide/opine/nickel ABC transporter (PepT) family, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CYB_0784 peptide/opine/nickel ABC transporter (PepT) family, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CYB_1884 peptide/opine/nickel ABC transporter (PepT) family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CYB_0850 OppBC ABC transporter family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CYB_1883 peptide/opine/nickel ABC transporter (PepT) family, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CYB_1186 oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CYB_1882 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CYB_0248 peptide/opine/nickel ABC transporter (PepT) family, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CYB_1881 peptide/opine/nickel uptake ABC transporter (PepT) family, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CYB_2241 oxaA; inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYB_0818 peptidase, S8A (subtilisin) family K14645 K14645; serine protease [EC:3.4.21.-]
D CYB_1219 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CYB_2094 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CYB_2615 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CYB_2451 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYB_0312 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CYB_0262 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D CYB_1936 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
C 02040 Flagellar assembly
D CYB_2206 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CYB_1477 RNA polymerase sigma-70 factor family K03086 rpoD; RNA polymerase primary sigma factor
D CYB_0662 RNA polymerase sigma factor, group 1 K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CYB_2531 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:cyb04980]
D CYB_1671 putative cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CYB_2208 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cyb01501]
D CYB_1430 ampG; peptide-acetyl-coenzyme A transporter (PAT) family protein AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CYB_2338 glycosyl hydrolase domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CYB_1894 carboxylesterase, beta-lactamase family K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CYB_0895 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CYB_0996 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cyb01502]
D CYB_2109 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CYB_0655 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CYB_2039 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CYB_1146 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CYB_2152 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CYB_1058 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CYB_0584 VanW family protein K18346 vanW; vancomycin resistance protein VanW
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cyb01503]
D CYB_0360 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CYB_2787 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cyb01000]
C 01001 Protein kinases [BR:cyb01001]
D CYB_1864 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CYB_0949 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CYB_2515 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CYB_0466 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CYB_0637 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CYB_2327 sensor histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D CYB_0805 pmgA; pmgA protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D CYB_1522 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D CYB_0522 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D CYB_0858 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CYB_1410 sensor histidine kinase K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3]
D CYB_2421 sensory box histidine kinase K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D CYB_1895 sasA; adaptive-response sensory histidine kinase SasA K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D CYB_2752 sensor histidine kinase/response regulator K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
C 01009 Protein phosphatases and associated proteins [BR:cyb01009]
D CYB_1751 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CYB_1003 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CYB_0947 putatve protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cyb01002]
D CYB_0541 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CYB_0909 gspO; prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CYB_1168 guaA; GMP synthase, glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CYB_0308 glutamine amidotransferase, class I K07010 K07010; putative glutamine amidotransferase
D CYB_2131 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CYB_1253 gltS; ferredoxin-dependent glutamate synthase K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D CYB_1089 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CYB_0863 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase family protein K19200 IAL; isopenicillin-N N-acyltransferase like protein
D CYB_2167 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CYB_0682 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CYB_0111 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CYB_2716 peptidase M3B family, nonpeptidase-like protein K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CYB_1058 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CYB_0731 peptidase M16B family, nonpeptidase-like protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D CYB_1818 peptidase, M17 (leucyl aminopeptidase) family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CYB_2617 map-2; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CYB_2149 map-1; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CYB_1026 peptidase, M24B family K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CYB_0631 hflB; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CYB_0004 metalloprotease, ATP-dependent, FtsH family K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CYB_2009 peptidase, M55 (DppA aminopeptidase) family K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D CYB_0818 peptidase, S8A (subtilisin) family K14645 K14645; serine protease [EC:3.4.21.-]
D CYB_2532 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D CYB_0112 phospholipase/carboxylesterase family protein K01076 ABHD17; abhydrolase domain-containing protein 17 [EC:3.1.2.22]
D CYB_2287 putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CYB_2519 conserved hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CYB_2581 clpP-2; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CYB_0608 clpP-1; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CYB_0610 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CYB_0494 ATP-dependent protease La domain protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CYB_0452 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CYB_0956 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CYB_0822 prc-1; C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CYB_1628 prc-2; C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CYB_0080 peptidase family S41, nonpeptidase-like protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CYB_0984 sppA-2; signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D CYB_0656 sppA-1; signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D CYB_2043 cphB; cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D CYB_2002 peptidase, S54 (rhomboid) family K07059 K07059; rhomboid family protein
D CYB_2005 asparaginase 2 family protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CYB_2091 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CYB_0970 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CYB_2411 tldD/pmbA family protein K03592 pmbA; PmbA protein
D CYB_0779 tldD/pmbA family protein K03592 pmbA; PmbA protein
D CYB_2405 peptidase, U62 family K03568 tldD; TldD protein
D CYB_2880 putative peptidase TldD K03568 tldD; TldD protein
D CYB_2140 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:cyb01003]
D CYB_0997 glycosyl transferase, group 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CYB_0176 glycosyl transferase, group 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CYB_0468 TPR domain protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CYB_0476 methyltransferase, FkbM family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CYB_1256 TPR domain protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CYB_0649 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D CYB_1788 glycosyl transferase, group 2 family protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D CYB_0646 glgA-1; glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D CYB_1734 glgA-2; glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D CYB_1888 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CYB_2811 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CYB_2622 glycosyl transferase, group 1 family protein K03867 BGLUT; UDP-glucose:tetrahydrobiopterin glucosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cyb01005]
D CYB_2787 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CYB_2789 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CYB_2785 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CYB_1289 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CYB_1435 glycosyl transferase, group 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CYB_2811 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cyb01011]
D CYB_0095 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CYB_1560 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CYB_1559 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CYB_0292 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CYB_1235 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CYB_2109 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CYB_0655 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CYB_0359 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CYB_1146 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CYB_2152 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CYB_2055 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CYB_2733 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CYB_0895 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CYB_0996 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CYB_1246 penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D CYB_2287 putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CYB_2519 conserved hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CYB_1058 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CYB_0096 transglycosylase, SLT family K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CYB_2293 conserved hypothetical protein TIGR00247 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CYB_1655 rare lipoprotein A family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CYB_2360 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CYB_0562 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CYB_0633 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CYB_0360 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CYB_0453 hypothetical protein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:cyb01004]
D CYB_2339 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CYB_2340 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CYB_1666 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CYB_2090 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CYB_2786 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CYB_1160 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CYB_2181 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYB_2341 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CYB_0321 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CYB_1706 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cyb01008]
D CYB_1874 cefD; isopenicillin N-epimerase K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
C 01006 Prenyltransferases [BR:cyb01006]
D CYB_1859 crtE; geranylgeranyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CYB_0451 sds; solanesyl diphosphate synthase K05356 SPS; all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]
D CYB_1646 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CYB_1695 crtB; phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CYB_2044 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CYB_2237 prenyltransferase, UbiA family K09833 HPT; homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:2.5.1.115 2.5.1.116]
D CYB_2854 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CYB_0660 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CYB_0533 chlG; chlorophyll synthase, ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:cyb01007]
D CYB_1680 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYB_2511 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CYB_2214 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CYB_1821 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CYB_1944 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CYB_2229 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CYB_1022 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CYB_0301 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CYB_2881 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CYB_1514 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CYB_1161 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CYB_0694 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CYB_0066 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CYB_2517 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CYB_1790 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CYB_1126 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CYB_1492 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CYB_1521 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CYB_0735 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CYB_2916 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CYB_1878 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CYB_1421 aspB; aminotransferase, classes I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CYB_1262 aminotransferase, classes I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CYB_0260 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CYB_2128 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CYB_1419 argD; acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CYB_1012 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CYB_0479 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cyb00194]
D CYB_0371 psbA-2; photosystem II protein D1 K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D CYB_0216 psbA-1; photosystem II protein D1 K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D CYB_0433 psbA-3; photosystem II protein D1 K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D CYB_0854 psbD-1; photosystem II protein D2 K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D CYB_1736 psbD-2; photosystem II protein D2 K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D CYB_2266 photosystem II protein, PsbB/PsbC family K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D CYB_0853 psbC; photosystem II 44 kDa subunit reaction center protein K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D CYB_2268 photosystem II protein, PsbB/PsbC family K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D CYB_0281 psbB; photosystem II P680 chlorophyll A apoprotein K02704 psbB; photosystem II CP47 chlorophyll apoprotein
D CYB_1495 psbE; cytochrome b559, alpha subunit K02707 psbE; photosystem II cytochrome b559 subunit alpha
D CYB_1496 psbF; cytochrome b559, beta subunit K02708 psbF; photosystem II cytochrome b559 subunit beta
D CYB_1497 psbL; photosystem II reaction center protein PsbL K02713 psbL; photosystem II PsbL protein
D CYB_1498 psbJ; photosystem II reaction center protein PsbJ K02711 psbJ; photosystem II PsbJ protein
D CYB_1373 psbH; photosystem II reaction center protein PsbH K02709 psbH; photosystem II PsbH protein
D CYB_2458 psbI; photosystem II reaction center protein PsbI K02710 psbI; photosystem II PsbI protein
D CYB_0104 psbK; photosystem II reaction center protein PsbK K02712 psbK; photosystem II PsbK protein
D CYB_0282 psbT; photosystem II reaction center protein PsbT K02718 psbT; photosystem II PsbT protein
D CYB_2057 YCF9, conserved hypothetical protein K02724 psbZ; photosystem II PsbZ protein
D CYB_0673 psbY; photosystem II protein PsbY K02723 psbY; photosystem II PsbY protein
D CYB_0963 putative photosystem II protein K08902 psb27; photosystem II Psb27 protein
D CYB_1606 psbW; photosystem II reaction center protein PsbW K08903 psb28; photosystem II 13kDa protein
D CYB_1551 psbO; photosystem II manganese-stabilizing protein K02716 psbO; photosystem II oxygen-evolving enhancer protein 1
D CYB_0129 psbP; photosystem II oxygen evolving complex protein PsbP K02717 psbP; photosystem II oxygen-evolving enhancer protein 2
D CYB_2539 cytochrome, putative K02720 psbV; photosystem II cytochrome c550
D CYB_2537 cytochrome c550 K02720 psbV; photosystem II cytochrome c550
D CYB_0136 psbU; photosystem II 12 kDa extrinsic protein PsbU K02719 psbU; photosystem II PsbU protein
D CYB_0812 psbX; photosystem II reaction center protein PsbX K02722 psbX; photosystem II PsbX protein
D CYB_0022 psaA; photosystem I core protein PsaA K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12]
D CYB_0021 psaB; photosystem I core protein PsaB K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12]
D CYB_0549 psaC; photosystem I iron-sulfur center, subunit VII K02691 psaC; photosystem I iron-sulfur center [EC:1.97.1.12]
D CYB_2253 psaD; photosystem I reaction center subunit II K02692 psaD; photosystem I subunit II
D CYB_1245 psaE; photosystem I reaction center subunit IV K02693 psaE; photosystem I subunit IV
D CYB_2824 psaF; photosystem I reaction center subunit III K02694 psaF; photosystem I subunit III
D CYB_1500 psaI; photosystem I reaction center subunit VIII K02696 psaI; photosystem I subunit VIII
D CYB_2825 psaJ; photosystem I reaction center subunit IX K02697 psaJ; photosystem I subunit IX
D CYB_0103 psaK; photosystem I reaction center protein PsaK K02698 psaK; photosystem I subunit X
D CYB_1499 psaL-1; photosystem I reaction center subunit XI K02699 psaL; photosystem I subunit XI
D CYB_2826 psaL-2; photosystem I reaction center subunit XI K02699 psaL; photosystem I subunit XI
D CYB_2809 psaM; photosystem I reaction center subunit XII K02700 psaM; photosystem I subunit XII
D CYB_1621 petA; apocytochrome F K02634 petA; apocytochrome f
D CYB_1629 petB; cytochrome b6 K02635 petB; cytochrome b6
D CYB_1622 petC; cytochrome b6-f complex, iron-sulfur subunit K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D CYB_2623 iron-sulfur cluster-binding protein, Rieske family K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D CYB_1630 petD; cytochrome b6-f complex, subunit IV K02637 petD; cytochrome b6-f complex subunit 4
D CYB_2426 petG; cytochrome b6-f complex, subunit V K02640 petG; cytochrome b6-f complex subunit 5
D CYB_0855 petM; cytochrome b6-f complex, subunit VII K02643 petM; cytochrome b6-f complex subunit 7
D CYB_1803 petE; plastocyanin K02638 petE; plastocyanin
D CYB_2282 ferredoxin, 2Fe-2S K02639 petF; ferredoxin
D CYB_1598 ferredoxin, 2Fe-2S K02639 petF; ferredoxin
D CYB_0405 ferredoxin, 2Fe-2S K02639 petF; ferredoxin
D CYB_2831 ferredoxin, 2Fe-2S K02639 petF; ferredoxin
D CYB_2882 petH; ferredoxin--NADP reductase K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2]
D CYB_1519 petJ; cytochrome c6 K08906 petJ; cytochrome c6
D CYB_2222 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CYB_2502 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CYB_2672 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CYB_2673 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CYB_2674 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CYB_2675 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CYB_2676 ATP synthase F0, B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CYB_2677 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CYB_2679 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CYB_2680 ATP synthase protein I K02116 atpI; ATP synthase protein I
D CYB_1438 apcA; allophycocyanin, alpha subunit K02092 apcA; allophycocyanin alpha subunit
D CYB_1439 apcB-1; allophycocyanin, beta subunit K02093 apcB; allophycocyanin beta subunit
D CYB_1440 apcC; phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core K02094 apcC; phycobilisome core linker protein
D CYB_0186 apcD; allophycocyanin alpha, B subunit K02095 apcD; allophycocyanin-B
D CYB_0431 putative phycobilisome 120 kDa linker polypeptide, core K02096 apcE; phycobilisome core-membrane linker protein
D CYB_2211 apcB-2; allophycocyanin, beta subunit K02097 apcF; phycobilisome core component
D CYB_2738 cpcA-2; phycocyanin, alpha subunit K02284 cpcA; phycocyanin alpha chain
D CYB_0940 cpcA-1; phycocyanin, alpha subunit K02284 cpcA; phycocyanin alpha chain
D CYB_2740 cpcB-2; phycocyanin, beta subunit K02285 cpcB; phycocyanin beta chain
D CYB_0939 cpcB-1; phycocyanin, beta subunit K02285 cpcB; phycocyanin beta chain
D CYB_2737 cpcC; phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod K02286 cpcC; phycocyanin-associated rod linker protein
D CYB_0941 cpcD; phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod K02287 cpcD; phycocyanin-associated, rod
D CYB_0170 CpcD/allophycocyanin linker domain protein K02287 cpcD; phycocyanin-associated, rod
D CYB_2736 cpcE-2; phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit K02288 cpcE; phycocyanobilin lyase subunit alpha [EC:4.4.1.32]
D CYB_0942 cpcE-1; phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit K02288 cpcE; phycocyanobilin lyase subunit alpha [EC:4.4.1.32]
D CYB_0943 cpcF; phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit K02289 cpcF; phycocyanobilin lyase subunit beta [EC:4.4.1.32]
D CYB_0944 cpcG1; phycobilisome rod-core linker polypeptide cpcG1 K02290 cpcG; phycobilisome rod-core linker protein
D CYB_0568 putative phycobilisome linker polypeptide K05378 cpeC; phycoerythrin-associated linker protein
D CYB_2841 CpeS-like protein K05382 cpeS; phycoerythrin-associated linker protein
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cyb03000]
D CYB_1948 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CYB_1406 sufR; iron-sulfur cluster biosynthesis transcriptional regulator SufR K09012 sufR; DeoR family transcriptional regulator, suf operon transcriptional repressor
D CYB_2078 transcriptional regulator, GntR family K07978 plmA; GntR family transcriptional regulator
D CYB_1088 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CYB_2513 hypothetical protein K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D CYB_1319 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CYB_2285 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CYB_2570 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CYB_2652 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYB_1702 trunctated cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYB_1457 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CYB_2533 ntcA; nitrogen-responsive regulatory protein K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator
D CYB_2499 transcriptional regulator, putative K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D CYB_1316 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CYB_0457 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CYB_0663 conserved domain protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D CYB_0516 proline dehydrogenase/1-pyrroline-5 carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CYB_0450 conserved domain protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CYB_2363 BolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D CYB_2369 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CYB_2439 transcriptional activator TenA, putative K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CYB_2433 pyrR; pyrR bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CYB_1950 nrdR; transcriptional regulator, NrdR family K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:cyb03021]
D CYB_1580 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CYB_2436 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CYB_2437 rpoC1; DNA-directed RNA polymerase, gamma subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CYB_2438 rpoC2; DNA-directed RNA polymerase, beta'' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CYB_2308 putative DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CYB_2206 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CYB_1477 RNA polymerase sigma-70 factor family K03086 rpoD; RNA polymerase primary sigma factor
D CYB_0662 RNA polymerase sigma factor, group 1 K03086 rpoD; RNA polymerase primary sigma factor
D CYB_2734 RNA polymerase sigma-70 factor family K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CYB_1142 RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CYB_1458 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CYB_0582 RNA polymerase sigma factor, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CYB_1178 RNA polymerase sigma-70 factor family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CYB_0232 sigma factor, putative K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CYB_2489 RNA polymerase sigma factor, group 3 K03090 sigB; RNA polymerase sigma-B factor
D CYB_2245 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CYB_2099 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CYB_1220 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CYB_2066 GAF/SpoIIE domain protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D CYB_2926 response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D CYB_0177 anti-anti-sigma factor family protein K04749 rsbV; anti-sigma B factor antagonist
D CYB_2666 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D CYB_2327 sensor histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D CYB_0805 pmgA; pmgA protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
C 03019 Messenger RNA biogenesis [BR:cyb03019]
D CYB_1823 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D CYB_0755 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CYB_0047 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CYB_2525 zam; acetazolamide conferring resistance protein Zam K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CYB_0669 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CYB_2531 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CYB_1445 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CYB_2934 dnaK-2; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CYB_2781 dnaK-1; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CYB_1618 groL-1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYB_1712 groL-2; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYB_1834 conserved hypothetical protein K03666 hfq; host factor-I protein
D CYB_2082 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CYB_0992 ATP-binding protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:cyb03011]
D CYB_2353 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CYB_0847 putative ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CYB_1534 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CYB_2603 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CYB_1094 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CYB_2613 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CYB_1664 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CYB_0919 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CYB_2610 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CYB_1584 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CYB_0922 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CYB_1579 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CYB_0918 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CYB_1578 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CYB_1362 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CYB_0184 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CYB_0448 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CYB_2606 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CYB_1633 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CYB_2601 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CYB_2798 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CYB_1229 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CYB_1711 Ycf65-like protein K19032 PSRP3; 30S ribosomal protein 3
D CYB_1222 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CYB_2600 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CYB_2597 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CYB_2598 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CYB_2609 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CYB_2611 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CYB_1080 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CYB_1223 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CYB_1221 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CYB_1224 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CYB_1583 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CYB_2607 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CYB_2614 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CYB_2604 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CYB_1581 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CYB_2612 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CYB_2889 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CYB_2849 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CYB_0742 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CYB_2602 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CYB_2599 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CYB_2608 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CYB_0741 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CYB_1051 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CYB_2605 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CYB_1585 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CYB_0148 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CYB_1634 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CYB_2942 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CYB_2848 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CYB_1577 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CYB_1381 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CYB_1953 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CYB_1377 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CYB_1957 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CYB_1954 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CYB_1380 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cyb03009]
D CYB_0755 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CYB_1268 era; GTP-binding protein Era K03595 era; GTPase
D CYB_0068 GTP-binding protein K03595 era; GTPase
D CYB_2352 GTP-binding protein, GTP1/OBG family K03979 obgE; GTPase [EC:3.6.5.-]
D CYB_2245 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CYB_2099 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CYB_1220 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CYB_0986 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CYB_1963 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CYB_0695 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CYB_1166 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CYB_1327 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CYB_2500 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CYB_1073 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CYB_2829 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CYB_2023 hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D CYB_1027 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CYB_0500 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CYB_1113 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CYB_0078 RNA pseudouridine synthase family protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D CYB_1212 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CYB_0323 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CYB_2037 MiaB-like tRNA modifying enzyme YliG, TIGR01125 K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CYB_0696 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CYB_1823 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D CYB_1750 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CYB_2828 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D CYB_2937 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CYB_1263 engA; GTP-binding protein EngA K03977 engA; GTPase
D CYB_0642 GTPase family protein K14540 rbgA; ribosome biogenesis GTPase A
D CYB_0382 GTP-binding protein K03665 hflX; GTPase
D CYB_1030 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CYB_1543 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CYB_0200 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CYB_2246 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CYB_1892 S4 domain protein K14761 rlbA; ribosome-associated protein
D CYB_0062 iojap-like protein K09710 ybeB; ribosome-associated protein
D CYB_1900 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D CYB_2924 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D CYB_2238 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cyb03016]
D CYB_1636 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CYB_2898 polyA polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CYB_2855 polyA polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CYB_1680 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYB_1126 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CYB_1022 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CYB_2881 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CYB_2229 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CYB_1944 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CYB_1514 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CYB_1161 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CYB_1521 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CYB_1492 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CYB_1790 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CYB_1821 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CYB_0301 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CYB_0694 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CYB_0735 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CYB_2916 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CYB_2511 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CYB_2214 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CYB_0378 histidine triad family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CYB_2166 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CYB_1582 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CYB_2212 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CYB_0419 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYB_1648 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYB_1030 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CYB_2044 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CYB_2687 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CYB_2823 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CYB_1184 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CYB_0444 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CYB_2941 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CYB_1741 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CYB_2552 exoribonuclease, VacB/RNB family K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D CYB_1361 3'-5' exonuclease family protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CYB_0066 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CYB_2517 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CYB_0635 cytidine and deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CYB_1632 dihydrouridine synthase family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CYB_1683 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CYB_2783 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D CYB_0051 gid; gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D CYB_1217 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CYB_0261 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CYB_1962 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D CYB_1191 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CYB_1638 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D CYB_2647 aminomethyltransferase, putative K06980 ygfZ; tRNA-modifying protein YgfZ
D CYB_1409 miaE; tRNA-(MS[2]IO[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D CYB_1668 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CYB_0675 putative 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CYB_1537 iron-sulfur cluster binding protein, putative K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CYB_2008 conserved hypothetical protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D CYB_0511 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CYB_2368 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CYB_0434 glycoprotease family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CYB_2822 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CYB_1959 conserved hypothetical protein TIGR00150 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CYB_2525 zam; acetazolamide conferring resistance protein Zam K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CYB_1445 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cyb03012]
D CYB_1127 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CYB_0524 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CYB_1739 putative drug resistance ATPase-1 (Drug RA1) ABC transporter family, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CYB_1535 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CYB_0921 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CYB_0920 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CYB_1586 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CYB_2897 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CYB_0966 methyltransferase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CYB_0725 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CYB_2618 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CYB_0435 efp; translation elongation factor P K02356 efp; elongation factor P
D CYB_1875 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cyb03110]
D CYB_2524 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CYB_0607 clpC; Clp protease, ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CYB_1336 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CYB_1003 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CYB_2934 dnaK-2; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CYB_2781 dnaK-1; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CYB_1618 groL-1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYB_1712 groL-2; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYB_2935 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CYB_0100 DnaJ family protein K03686 dnaJ; molecular chaperone DnaJ
D CYB_1817 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D CYB_0745 DnaJ family protein K05516 cbpA; curved DNA-binding protein
D CYB_2782 DnaJ family protein K05516 cbpA; curved DNA-binding protein
D CYB_1437 Hsp33 family protein K04083 hslO; molecular chaperone Hsp33
D CYB_2933 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CYB_1589 small heat shock protein (HSP20) family protein K13993 HSP20; HSP20 family protein
D CYB_0253 small heat shock protein (HSP20) family protein K13993 HSP20; HSP20 family protein
D CYB_1619 groS; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D CYB_0631 hflB; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CYB_0004 metalloprotease, ATP-dependent, FtsH family K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CYB_2679 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CYB_1517 nuclear export factor GLE1-like protein K09796 pccA; periplasmic copper chaperone A
D CYB_2545 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CYB_2844 hydrogenase accessory protein HypB, interruption-C K04652 hypB; hydrogenase nickel incorporation protein HypB
D CYB_0818 peptidase, S8A (subtilisin) family K14645 K14645; serine protease [EC:3.4.21.-]
D CYB_2104 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CYB_0960 trx-2; thioredoxin K03671 TXN; thioredoxin
D CYB_0192 trx-1; thioredoxin K03671 TXN; thioredoxin
D CYB_0125 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D CYB_2364 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
C 04131 Membrane trafficking [BR:cyb04131]
D CYB_0270 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CYB_2118 membrane protein, putative K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CYB_2290 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CYB_1334 arsenite-antimonite (ArsAB) efflux family transporter, ATP-binding protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CYB_1135 ATPase, arsenite-antimonite (ArsAB) efflux transporter family K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CYB_1429 gap-1; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CYB_2384 pyruvate kinase barrel domain protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYB_1545 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYB_1003 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:cyb04121]
C 03051 Proteasome [BR:cyb03051]
D CYB_1003 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cyb03032]
D CYB_1340 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CYB_0896 hup-2; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CYB_0804 hup-1; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D CYB_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CYB_1081 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CYB_1520 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CYB_0117 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CYB_1663 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CYB_1183 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYB_1539 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CYB_2699 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CYB_1099 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CYB_1304 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CYB_1824 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CYB_1335 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CYB_2715 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CYB_1609 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CYB_0008 type II DNA topoisomerase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CYB_0322 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CYB_2358 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cyb03036]
D CYB_0468 TPR domain protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CYB_0476 methyltransferase, FkbM family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CYB_1256 TPR domain protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CYB_0755 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CYB_0896 hup-2; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CYB_0804 hup-1; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D CYB_0745 DnaJ family protein K05516 cbpA; curved DNA-binding protein
D CYB_2782 DnaJ family protein K05516 cbpA; curved DNA-binding protein
D CYB_0744 conserved hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D CYB_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CYB_2686 dps; dps protein K04047 dps; starvation-inducible DNA-binding protein
D CYB_1434 dps protein K04047 dps; starvation-inducible DNA-binding protein
D CYB_0414 dpsA; nutrient-stress induced DNA binding protein K04047 dps; starvation-inducible DNA-binding protein
D CYB_1834 conserved hypothetical protein K03666 hfq; host factor-I protein
D CYB_2940 putative chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D CYB_1154 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CYB_0114 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CYB_1887 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CYB_0996 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CYB_1799 conserved hypothetical protein K03589 ftsQ; cell division protein FtsQ
D CYB_0293 putative cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CYB_1880 putative permease K09811 ftsX; cell division transport system permease protein
D CYB_2110 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CYB_0360 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CYB_0316 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CYB_0317 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CYB_0318 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CYB_1747 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D CYB_2492 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CYB_2493 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D CYB_1649 putative rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D CYB_1068 putative chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D CYB_0798 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D CYB_1231 putative partition protein A K03496 parA; chromosome partitioning protein
D CYB_1877 CobQ/CobB/MinD/ParA nucleotide binding domain K03496 parA; chromosome partitioning protein
D CYB_2823 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CYB_1166 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CYB_0051 gid; gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D CYB_1392 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D CYB_0769 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:cyb03400]
D CYB_0202 phrB-1; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CYB_2817 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CYB_0752 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CYB_0991 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CYB_2151 base excision DNA repair protein, HhH-GPD family K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CYB_0191 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CYB_1949 deoxyribodipyrimidine photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D CYB_2440 putative uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CYB_2404 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CYB_1244 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CYB_0231 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CYB_1106 recJ-2; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CYB_0828 recJ-1; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CYB_1335 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CYB_1196 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CYB_0807 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CYB_1251 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CYB_2100 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYB_1368 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CYB_2436 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CYB_2437 rpoC1; DNA-directed RNA polymerase, gamma subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CYB_2438 rpoC2; DNA-directed RNA polymerase, beta'' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CYB_1580 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CYB_2308 putative DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CYB_1207 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CYB_2731 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CYB_2373 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CYB_2276 putative DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CYB_0088 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CYB_0089 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CYB_1183 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CYB_1539 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CYB_2699 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CYB_1099 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CYB_1304 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CYB_0117 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CYB_1663 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CYB_2715 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CYB_1961 recA; recA protein K03553 recA; recombination protein RecA
D CYB_0546 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CYB_0432 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CYB_0493 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CYB_2227 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CYB_1107 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D CYB_1970 RecF/RecN/SMC N terminal domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D CYB_1971 Ser/Thr protein phosphatase family protein K03547 sbcD; DNA repair protein SbcD/Mre11
D CYB_2775 sbcD; nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D CYB_1512 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CYB_2719 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CYB_2808 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CYB_2559 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CYB_2895 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CYB_0776 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CYB_0835 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D CYB_1609 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CYB_0008 type II DNA topoisomerase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CYB_0322 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CYB_2358 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CYB_0896 hup-2; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CYB_0804 hup-1; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D CYB_0669 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CYB_2646 conserved hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
C 03029 Mitochondrial biogenesis [BR:cyb03029]
D CYB_1127 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CYB_0524 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CYB_1535 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CYB_0921 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CYB_0920 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CYB_1268 era; GTP-binding protein Era K03595 era; GTPase
D CYB_0068 GTP-binding protein K03595 era; GTPase
D CYB_2511 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CYB_2881 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CYB_1161 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CYB_1944 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CYB_1605 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CYB_0708 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CYB_2217 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CYB_0117 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CYB_1663 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D CYB_0770 membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D CYB_2934 dnaK-2; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CYB_2781 dnaK-1; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CYB_2933 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CYB_1618 groL-1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYB_1712 groL-2; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYB_1619 groS; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D CYB_2935 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CYB_0100 DnaJ family protein K03686 dnaJ; molecular chaperone DnaJ
D CYB_1817 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D CYB_0419 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYB_1648 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYB_2364 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D CYB_0769 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CYB_0660 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CYB_0661 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CYB_2241 oxaA; inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYB_0914 transporter, stomatin/podocin/band 7/nephrosis.2/SPFH (Stomatin) family K17081 PHB2; prohibitin 2
D CYB_0915 HflC/HflK family protein K17081 PHB2; prohibitin 2
D CYB_1133 HflC/HflK family protein K17081 PHB2; prohibitin 2
D CYB_1003 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cyb02000]
D CYB_1234 heavy metal ABC transporter (HMT) family, permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CYB_1689 ABC transporter, permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CYB_2161 ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CYB_0181 peroxisomal fatty acyl CoA ABC transporter (P-FAT) family, transmembrane ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D CYB_0009 putative drug resistance ATPase-1 (Drug RA1) ABC transporter family, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CYB_0239 sbp; sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CYB_0237 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CYB_0236 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CYB_0238 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CYB_0399 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CYB_0398 modB; molybdate ABC transporter, permease protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CYB_0035 nrtA; nitrate ABC transporter, periplasmic nitrate-binding protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CYB_0036 ntrB-1; nitrate ABC transporter, permease protein NrtB K15577 nrtB; nitrate/nitrite transport system permease protein
D CYB_0037 ntrC-1; nitrate ABC transporter, ATP-binding protein NtrC K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D CYB_0038 ntrD; nitrate ABC transporter, ATP-binding protein NtrD K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D CYB_0604 nitrate/nitrite/cyanate ABC transporter (NitT) family, periplasmic substrate-binding protein K11950 cmpA; bicarbonate transport system substrate-binding protein
D CYB_0603 ntrB-2; nitrate ABC transporter, permease protein K11951 cmpB; bicarbonate transport system permease protein
D CYB_0602 ntrC-2; nitrate ABC transporter, ATP-binding proteins NtrC K11952 cmpC; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D CYB_0601 nitrate ABC transporter, ATP-binding protein NtrD K11953 cmpD; bicarbonate transport system ATP-binding protein [EC:7.3.2.-]
D CYB_2669 ferric iron uptake ABC transporter (FeT) family, periplasmic substrate binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CYB_2671 ferric iron uptake ABC transporter (FeT) family, permease protein K02011 afuB; iron(III) transport system permease protein
D CYB_0190 ferric iron ABC transporter (FeT) family, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CYB_0505 polyamine transporter, periplasmic polyamine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CYB_2209 potC; spermidine/putrescine ABC transporter, permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D CYB_1299 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D CYB_1301 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CYB_1762 polyamine ABC transporter, periplasmic polyamine-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CYB_1464 polyamine/opine/phosphonate uptake ABC transporter family,periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CYB_0027 conserved hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CYB_0545 polyamine/opine/phosphonate uptake ABC transporter (POPT) family, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CYB_0130 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CYB_0132 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CYB_0234 polyamine/opine/phosphonate uptake ABC transporter (POPT) family, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CYB_0024 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CYB_2079 polyamine ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CYB_0579 quaternary amine uptake ABC transporter (QAT) family, periplasmic substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D CYB_0581 quaternary amine uptake ABC transporter (QAT) family, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D CYB_0029 quaternary amine ABC transporter (QAT) family, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D CYB_0580 quaternary amine uptake ABC transporter (QAT) family, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CYB_1943 Tat (twin-arginine translocation) pathway signal sequence domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CYB_2550 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CYB_0267 NitT/TauT family ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CYB_1359 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CYB_2446 ABC transporter, ATP-binding protein, truncation K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CYB_2549 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CYB_1360 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CYB_0268 NitT/TauT family ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CYB_1590 carbohydrate uptake ABC transporter-1 (CUT1) family, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CYB_2477 ugpB; glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CYB_2478 upgA; glycerol-3-phosphate ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CYB_2893 putative sn-glycerol-3-phosphate ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CYB_0391 membrane protein, bmp family K07335 bmpA; basic membrane protein A and related proteins
D CYB_1265 conserved hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D CYB_0389 carbohydrate ABC transporter-2 (CUT2) family, permease protein K23535 nupB; general nucleoside transport system permease protein
D CYB_0309 carbohydrate uptake ABC transporter-2 (CUT2) family, permease protein K23535 nupB; general nucleoside transport system permease protein
D CYB_0388 carbohydrate ABC transporter-2 (CUT2) family, permease protein K23536 nupC; general nucleoside transport system permease protein
D CYB_1202 hydrophobic amino acid uptake ABC transporter (HAAT) family, permease protein K23536 nupC; general nucleoside transport system permease protein
D CYB_0390 carbohydrate uptake ABC transporter 2 (CUT2) family, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CYB_1651 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CYB_1087 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CYB_2505 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CYB_1086 mkl; ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CYB_2551 phosphate uptake transporter (PhoT) ABC transporter family, periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_1915 pstS-2; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_1077 pstS-1; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_2780 pstS-3; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CYB_1914 pstC-2; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CYB_1076 pstC-1; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CYB_1913 pstA-2; phosphate ABC transporter, permease protein PtsA K02038 pstA; phosphate transport system permease protein
D CYB_1075 pstA-1; phosphate ABC transporter, permease protein PtsA K02038 pstA; phosphate transport system permease protein
D CYB_1074 pstB-1; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CYB_1912 pstB-2; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CYB_1465 phnD-2; phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CYB_1466 phnD; phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CYB_0011 putative phosphonate ABC transporter, phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CYB_0160 phnD-1; phosphonate ABC tranporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D CYB_1468 phnE-2; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D CYB_1469 phnE-3; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D CYB_0161 phnE-1; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D CYB_1467 phnC-2; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CYB_0159 phnC-1; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CYB_0932 polar amino amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D CYB_0931 polar amino amino acid ABC transporter (PAAT) family, permease protein K09970 aapQ; general L-amino acid transport system permease protein
D CYB_0930 polar amino amino acid ABC transporter (PAAT) family, permease protein K09971 aapM; general L-amino acid transport system permease protein
D CYB_0933 polar amino amino acid ABC transporter (PAAT) family, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CYB_0772 hydrophobic amino acid ABC transporter (HAAT) family, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CYB_2084 hydrophobic amino acid ABC transporter (HAAT) family, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CYB_2083 hydrophobic amino acid ABC transporter (HAAT) family, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CYB_0774 hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CYB_0775 hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CYB_2015 urea ABC transporter, periplasmic urea-binding protein K11959 urtA; urea transport system substrate-binding protein
D CYB_2014 urea ABC transporter, permease protein K11960 urtB; urea transport system permease protein
D CYB_2013 urea ABC transporter, permease protein K11961 urtC; urea transport system permease protein
D CYB_2012 urea ABC transporter, ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D CYB_2011 urea ABC transporter, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D CYB_2850 amino acid transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CYB_2124 cystine ABC transporter, periplasmic cystine-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CYB_2125 cystine ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CYB_1885 peptide/opine/nickel ABC transporter (PepT) family, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CYB_0784 peptide/opine/nickel ABC transporter (PepT) family, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CYB_1884 peptide/opine/nickel ABC transporter (PepT) family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CYB_0850 OppBC ABC transporter family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CYB_1883 peptide/opine/nickel ABC transporter (PepT) family, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CYB_1186 oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CYB_1882 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CYB_0248 peptide/opine/nickel ABC transporter (PepT) family, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CYB_1881 peptide/opine/nickel uptake ABC transporter (PepT) family, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CYB_2725 iron chelate ABC transporter (FeCT) family, periplasmic substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CYB_2729 iron chelate uptake ABC transporter (FeCT) family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CYB_2728 iron chelate ABC transporter (FeCT) family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CYB_0144 putative zinc ABC transporter, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CYB_0147 manganese/zinc/iron chelate ABC transporter (MZT) family, permease protein K09816 znuB; zinc transport system permease protein
D CYB_0145 manganese/zinc/iron chelate ABC ransporter (MZT) family, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CYB_1162 cation ABC transporter, cation-binding protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein
D CYB_1164 manganese/zinc/iron chelate ABC transporter (MZT) family, permease protein K09819 ABC.MN.P; manganese/iron transport system permease protein
D CYB_1163 manganese/zinc/iron chelate ABC transporter (MZT) family, ATP-binding protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D CYB_2036 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CYB_2035 putative cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CYB_1798 putative cobalt ABC transporter (CoT) family, ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CYB_2034 conserved hypothetical protein K16915 cbiL; nickel transport protein
D CYB_2460 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CYB_1048 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CYB_1454 putative transporter K16785 ecfT; energy-coupling factor transport system permease protein
D CYB_2631 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CYB_1898 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CYB_2302 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D CYB_1357 putative membrane protein, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D CYB_2385 putative membrane protein, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D CYB_2383 hydrophobic amino acid uptake transporter (HAAT) ABC transporter family, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CYB_1658 putative membrane protein K25151 gldF; gliding motility-associated transport system permease protein
D CYB_1657 ABC transporter, ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D CYB_1659 conserved hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D CYB_1557 devC; glycolipid ABC exporter (DevE) family, permease protein K25169 devC; heterocyst specific transport system permease protein
D CYB_1880 putative permease K09811 ftsX; cell division transport system permease protein
D CYB_1887 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CYB_1176 putative membrane protein K25154 evrC; viologen exporter family transport system permease protein
D CYB_1041 putative membrane protein K25155 evrB; viologen exporter family transport system permease protein
D CYB_1441 ABC transporter, ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D CYB_1205 putative ABC-2 type transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CYB_1870 putative ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D CYB_2400 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CYB_1206 drug exporter-1 ABC transporter (DrugE1) family, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CYB_1871 drug exporter-1 ABC transporter (DrugE1) family, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CYB_2030 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CYB_2892 macB; macrolide ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CYB_1555 devA; probable glycolipid ABC exporter (DevE) family, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CYB_0738 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CYB_1403 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CYB_0155 sodium/hydrogen exchanger/universal stress family protein K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
D CYB_0428 transporter, major facilitator family K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D CYB_2305 transporter, major facilitator family K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D CYB_2760 transporter, putative bacteriochlorophyll delivery (BCD) family K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D CYB_1430 ampG; peptide-acetyl-coenzyme A transporter (PAT) family protein AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CYB_0707 cation transporter, voltage-gated ion channel (VIC) family K10716 kch; voltage-gated potassium channel
D CYB_1806 potassium transporter, voltage-gated ion channel (VIC) family K10716 kch; voltage-gated potassium channel
D CYB_2705 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D CYB_1266 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CYB_2508 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D CYB_1404 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D CYB_0808 transporter, small conductance mechanosensitive ion channel (MscS) family K05802 mscK; potassium-dependent mechanosensitive channel
D CYB_2309 transporter, small conductance mechanosensitive ion channel (MscS) family K22044 ybiO; moderate conductance mechanosensitive channel
D CYB_2114 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D CYB_0819 proton transporter, MotA/TolQ/ExbB proton channel family K03561 exbB; biopolymer transport protein ExbB
D CYB_0820 sll1405; proton transporter, ExbD/TolR family K03559 exbD; biopolymer transport protein ExbD
D CYB_0154 crcB; crcB protein K06199 crcB; fluoride exporter
D CYB_1972 conserved hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D CYB_2424 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CYB_0481 putative transporter, HlyC/CorC (HCC) family K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CYB_0759 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CYB_1330 transporter, outer membrane receptor (OMR) family K16092 btuB; vitamin B12 transporter
D CYB_2727 transporter, TonB-dependent heme/hemoglobin receptor family K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D CYB_0770 membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D CYB_2191 conserved domain protein K09800 tamB; translocation and assembly module TamB
D CYB_1828 conserved hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D CYB_1565 metal cation transporter, zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family K07238 TC.ZIP; zinc transporter, ZIP family
D CYB_2310 cax; calcium/proton exchanger K07300 chaA; Ca2+:H+ antiporter
D CYB_2801 transporter, monovalent cation:proton antiporter-2 (CPA2) family K26735 KEA4_5_6; K+:H+ antiporter
D CYB_2516 napA; transporter, monovalent cation:proton antiporter-2 (CPA2) family K26730 napA; Na+:H+ antiporter
D CYB_0724 high-affinity Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D CYB_1338 K+ transporter, Trk family K03498 trkH; trk/ktr system potassium uptake protein
D CYB_1337 K+ transporter, Trk family K03499 trkA; trk/ktr system potassium uptake protein
D CYB_2150 chloride transporter, chloride channel family K03281 clcA; chloride channel protein, CIC family
D CYB_1257 transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D CYB_1611 sulfate transporter, sulfate permease (SulP) family K03321 TC.SULP; sulfate permease, SulP family
D CYB_1923 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D CYB_1334 arsenite-antimonite (ArsAB) efflux family transporter, ATP-binding protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CYB_1135 ATPase, arsenite-antimonite (ArsAB) efflux transporter family K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CYB_2365 transporter, arsenical resistance-3 (ACR3) family K03325 ACR3; arsenite transporter
D CYB_0214 transporter, cation:proton antiporter family K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D CYB_0207 NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4L family K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CYB_0208 NADH-ubiquinone/plastoquinone oxidoreductase family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CYB_0209 conserved hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CYB_0210 conserved hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CYB_0211 conserved hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CYB_2733 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CYB_2645 transporter, auxin efflux carrier (AEC) family K24180 mleP; malate permease and related proteins
D CYB_2059 putative membrane protein K09125 yhhQ; queuosine precursor transporter
D CYB_0293 putative cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CYB_2118 membrane protein, putative K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CYB_2290 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CYB_2629 transporter, lead (Pb2+) uptake porter (PbrT) family K07243 FTR; high-affinity iron transporter
D CYB_2726 TonB family protein K03832 tonB; periplasmic protein TonB
D CYB_2329 OmpA family protein K03640 pal; peptidoglycan-associated lipoprotein
D CYB_0625 cytochrome c biogenesis membrane protein K06196 ccdA; cytochrome c-type biogenesis protein
D CYB_0404 FeoA domain protein K04758 feoA; ferrous iron transport protein A
D CYB_2116 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CYB_2703 putative inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family protein K18814 ictB; putative inorganic carbon (hco3(-)) transporter
D CYB_1516 copper resistance protein CopC/D K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:cyb02044]
D CYB_1272 type IV pilin, putative K02456 gspG; general secretion pathway protein G
D CYB_0909 gspO; prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CYB_2143 pilB; type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D CYB_2141 pilC; type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D CYB_1939 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D CYB_1938 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D CYB_1937 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D CYB_1935 putative methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D CYB_0487 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D CYB_0486 pilN; type 4 fimbrial biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D CYB_0485 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D CYB_0484 type IV pilus secretin PilQ, putative K02666 pilQ; type IV pilus assembly protein PilQ
D CYB_2142 pilT-2; twitching motility protein K02669 pilT; twitching motility protein PilT
D CYB_0187 pilT-1; twitching mobility protein PilT K02669 pilT; twitching motility protein PilT
D CYB_1940 conserved hypothetical protein K02221 yggT; YggT family protein
D CYB_1064 conserved hypothetical protein K02221 yggT; YggT family protein
D CYB_0912 DNA internalization competence protein, ComEC/Rec2 family K02238 comEC; competence protein ComEC
D CYB_0654 hypothetical protein K02241 comFB; competence protein ComFB
D CYB_2451 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CYB_1758 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CYB_1219 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CYB_1757 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CYB_2094 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CYB_2615 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CYB_0262 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CYB_0312 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CYB_2241 oxaA; inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CYB_2449 tatA-2; twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CYB_1975 tatA-1; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CYB_0929 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cyb02042]
D CYB_2424 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CYB_0481 putative transporter, HlyC/CorC (HCC) family K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:cyb02022]
D CYB_0858 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CYB_2856 DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CYB_1410 sensor histidine kinase K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3]
D CYB_2501 DNA-binding response regulator K11521 manR; two-component system, OmpR family, manganese sensing response regulator
D CYB_2421 sensory box histidine kinase K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D CYB_1895 sasA; adaptive-response sensory histidine kinase SasA K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D CYB_0249 DNA-binding response regulator RpaA K10697 rpaA; two-component system, OmpR family, response regulator RpaA
D CYB_2561 DNA-binding response regulator K11329 rpaB; two-component system, OmpR family, response regulator RpaB
D CYB_2689 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CYB_1939 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D CYB_1938 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D CYB_1937 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D CYB_2752 sensor histidine kinase/response regulator K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D CYB_2748 response regulator K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D CYB_2749 response regulator K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D CYB_0283 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D CYB_1654 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:cyb02035]
D CYB_1936 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D CYB_1939 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D CYB_1938 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D CYB_1937 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D CYB_1935 putative methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D CYB_2142 pilT-2; twitching motility protein K02669 pilT; twitching motility protein PilT
D CYB_0187 pilT-1; twitching mobility protein PilT K02669 pilT; twitching motility protein PilT
D CYB_2748 response regulator K11522 pixG; two-component system, chemotaxis family, response regulator PixG
D CYB_2749 response regulator K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D CYB_2750 CheW domain protein K11524 pixI; positive phototaxis protein PixI
D CYB_2751 putative methyl-accepting chemotaxis protein K11525 pixJ; methyl-accepting chemotaxis protein PixJ
D CYB_2752 sensor histidine kinase/response regulator K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL
D CYB_2143 pilB; type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D CYB_2141 pilC; type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D CYB_0909 gspO; prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CYB_0484 type IV pilus secretin PilQ, putative K02666 pilQ; type IV pilus assembly protein PilQ
D CYB_0485 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D CYB_0486 pilN; type 4 fimbrial biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D CYB_0487 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins [BR:cyb03037]
D CYB_0155 sodium/hydrogen exchanger/universal stress family protein K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
C 04812 Cytoskeleton proteins [BR:cyb04812]
D CYB_2492 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CYB_2110 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CYB_0316 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CYB_0317 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CYB_0318 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CYB_1068 putative chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D CYB_0798 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D CYB_1231 putative partition protein A K03496 parA; chromosome partitioning protein
D CYB_1877 CobQ/CobB/MinD/ParA nucleotide binding domain K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:cyb04147]
D CYB_1003 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CYB_2531 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CYB_1429 gap-1; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CYB_1693 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CYB_2384 pyruvate kinase barrel domain protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYB_1545 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CYB_2254 antioxidant, AhpC/Tsa family K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CYB_1618 groL-1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYB_1712 groL-2; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CYB_2934 dnaK-2; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CYB_2781 dnaK-1; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CYB_2919 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CYB_1616 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CYB_0921 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CYB_0378 histidine triad family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CYB_2165 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CYB_2181 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CYB_0558 conserved domain protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
D CYB_1751 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CYB_2616 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CYB_2813 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CYB_2070 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CYB_1752 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CYB_1986 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CYB_1978 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CYB_2804 glnA-2; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CYB_2456 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CYB_0246 4-hydroxyphenylpyruvate dioxygenase, putative K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CYB_2873 putative pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CYB_1198 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CYB_1383 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CYB_2851 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CYB_0749 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CYB_1941 electron transfer flavoprotein, alpha subunit/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D CYB_1985 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CYB_0914 transporter, stomatin/podocin/band 7/nephrosis.2/SPFH (Stomatin) family K17081 PHB2; prohibitin 2
D CYB_0915 HflC/HflK family protein K17081 PHB2; prohibitin 2
D CYB_1133 HflC/HflK family protein K17081 PHB2; prohibitin 2
D CYB_2157 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cyb02048]
D CYB_0835 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D CYB_0834 cas2; CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D CYB_0596 cas6; CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D CYB_0593 csx10; CRISPR-associated RAMP protein, Csx10 family K19134 csx10; CRISPR-associated protein Csx10
D CYB_0842 crm2-2; CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2
D CYB_0595 crm2-1; CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2
D CYB_0841 conserved hypothetical protein K09127 cmr3; CRISPR-associated protein Cmr3
D CYB_0840 cmr4; CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D CYB_0837 CRISPR-associated RAMP protein K19142 cmr6; CRISPR-associated protein Cmr6
D CYB_0599 csx3; CRISPR-associated protein, Csx3 family K19144 csx3; CRISPR-associated protein Csx3
D CYB_2715 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CYB_2648 HNH endonuclease domain protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D CYB_0801 mrr; mrr restriction system protein K07448 mrr; restriction system protein
D CYB_2110 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CYB_2492 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CYB_1680 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CYB_0419 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CYB_1648 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:cyb04090]
C 01504 Antimicrobial resistance genes [BR:cyb01504]
D CYB_1894 carboxylesterase, beta-lactamase family K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CYB_1058 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CYB_0584 VanW family protein K18346 vanW; vancomycin resistance protein VanW
D CYB_1088 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cyb00537]
D CYB_1198 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cyb03100]
D CYB_1602 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CYB_1379 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CYB_1955 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CYB_0657 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CYB_0606 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CYB_1273 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CYB_1825 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CYB_2796 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CYB_2242 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CYB_1524 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CYB_1809 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CYB_2172 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CYB_2583 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CYB_2473 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CYB_1059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CYB_2097 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CYB_2235 tRNA-His K14226 tRNA-His; tRNA His
D CYB_1378 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CYB_1956 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CYB_0429 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_0880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_0509 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_2379 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_0459 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_1981 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CYB_2218 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CYB_0328 tRNA-Met K14230 tRNA-Met; tRNA Met
D CYB_2288 tRNA-Met K14230 tRNA-Met; tRNA Met
D CYB_0802 tRNA-Met K14230 tRNA-Met; tRNA Met
D CYB_2651 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CYB_1148 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CYB_2027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CYB_1532 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CYB_1717 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CYB_2414 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CYB_2323 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CYB_0700 pseudogene K14233 tRNA-Ser; tRNA Ser
D CYB_2693 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CYB_1642 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CYB_1413 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CYB_2888 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CYB_1643 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CYB_1155 tRNA-Val K14237 tRNA-Val; tRNA Val
D CYB_1615 tRNA-Val K14237 tRNA-Val; tRNA Val
D CYB_0440 tRNA-Val K14237 tRNA-Val; tRNA Val
D CYB_1377 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CYB_1957 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CYB_1954 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CYB_1380 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CYB_1381 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CYB_1953 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CYB_2219 sRNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CYB_1374 glucose/sorbosone dehydrogenase family protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D CYB_2441 semialdehyde dehydrogenase family protein K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]
D CYB_2306 gap-3; glyceraldehyde-3-phosphate dehydrogenase, type I K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D CYB_1991 iron-sulfur cluster-binding protein, putative K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D CYB_0674 oxidoreductase, FAD-binding K18208 RNLS; renalase [EC:1.6.3.5]
D CYB_2656 oxidoreductase, zinc-binding dehydrogenase family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CYB_0235 msrA; methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CYB_2628 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CYB_0813 ferredoxin-thioredoxin reductase, catalytic beta subunit K17892 FTRC; ferredoxin-thioredoxin reductase catalytic chain [EC:1.8.7.2]
D CYB_1043 ParB nuclease domain protein K12260 SRX1; sulfiredoxin [EC:1.8.98.2]
D CYB_1827 oxidoreductase molybdopterin binding domain K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D CYB_0523 bcp-1; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CYB_1057 antioxidant, AhpC/Tsa family K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CYB_2186 putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CYB_0113 antioxidant, AhpC/Tsa family K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CYB_1958 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CYB_0263 lignostilbene-alpha,beta-dioxygenase, putative K00464 diox1; all-trans-8'-apo-beta-carotenal 15,15'-oxygenase [EC:1.13.11.75]
D CYB_1854 clavaminate synthase K18058 asnO; L-asparagine oxygenase [EC:1.14.11.39]
D CYB_2270 oxidoreductase, 2OG-Fe(II) oxygenase family K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D CYB_0861 fatty acid desaturase K23036 desC2; sn-2 palmitoyl-lipid 9-desaturase [EC:1.14.19.27]
D CYB_2366 arsC; arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CYB_0243 pflA; pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CYB_2184 pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CYB_0142 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CYB_1443 putative arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D CYB_1414 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CYB_1709 acetyltransferase, GNAT family K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D CYB_0905 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CYB_1197 putative membrane-bound protease K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D CYB_2420 deoxyhypusine synthase family protein K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D CYB_1083 circadian phase modifier CpmA-like protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CYB_1960 lgt-2; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CYB_0666 phosphatidate cytidylyltransferase, putative K18678 VTE5; phytol kinase [EC:2.7.1.182]
D CYB_1563 est; carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D CYB_2294 yqeG; phosphatase, HAD superfamily, subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D CYB_0097 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D CYB_0998 HDIG domain protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D CYB_0917 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D CYB_1130 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D CYB_2464 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CYB_0109 nucH; thermonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CYB_2295 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CYB_2769 def-2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CYB_2132 def-1; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CYB_0326 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CYB_1181 hydrolase, carbon-nitrogen family K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CYB_0849 ATPase, AAA family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CYB_0252 conserved hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D CYB_2442 conserved hypothetical protein K14331 K14331; fatty aldehyde decarbonylase [EC:4.1.99.5]
D CYB_2051 carbohydrate kinase family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CYB_1309 conserved hypothetical protein TIGR00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CYB_0182 conserved hypothetical protein TIGR00299 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D CYB_2909 cyanophycin synthetase, truncation K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D CYB_0911 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D CYB_1005 glnA-1; glutamine synthetase K01949 gmaS; glutamate---methylamine ligase [EC:6.3.4.12]
D CYB_0722 conserved hypothetical protein K00345 ndhS; NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [EC:7.1.1.-]
D CYB_1481 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CYB_1641 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
D CYB_0229 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D CYB_1796 ccmK-1; carbon dioxide concentrating mechanism protein CcmK K08696 ccmK; carbon dioxide concentrating mechanism protein CcmK
D CYB_1797 ccmK-2; carbon dioxide concentrating mechanism protein CcmK K08696 ccmK; carbon dioxide concentrating mechanism protein CcmK
D CYB_1795 ccmL; carbon dioxide concentrating mechanism protein CcmL K08697 ccmL; carbon dioxide concentrating mechanism protein CcmL
D CYB_1794 ccmM; carbon dioxide concentrating mechanism protein CcmM K08698 ccmM; carbon dioxide concentrating mechanism protein CcmM
D CYB_1793 conserved hypothetical protein K08699 ccmN; carbon dioxide concentrating mechanism protein CcmN
D CYB_1792 bacterial microcompartments family protein K08700 ccmO; carbon dioxide concentrating mechanism protein CcmO
C 99982 Energy metabolism
D CYB_2712 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D CYB_0420 nifU; Fe-S cluster assembly protein NifU K13819 K13819; NifU-like protein
D CYB_0736 conserved hypothetical protein K14518 pipX; PII interaction protein X
D CYB_1830 gvpN; gas vesicle protein GvpN K04748 norQ; nitric oxide reductase NorQ protein
D CYB_0409 nifX; nitrogenase cofactor biosynthesis protein NifX K02596 nifX; nitrogen fixation protein NifX
D CYB_0427 NifT/FixU family protein K02593 nifT; nitrogen fixation protein NifT
D CYB_0426 nifZ; NifZ protein K02597 nifZ; nitrogen fixation protein NifZ
D CYB_0417 nifB; nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D CYB_0410 nifN; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN
D CYB_0411 nifE; nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D CYB_2267 flavodoxin K03839 fldA; flavodoxin I
D CYB_1942 electron transfer flavoprotein, beta subunit/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D CYB_0406 nifW; nitrogenase stabilizing/protective protein nifW K02595 nifW; nitrogenase-stabilizing/protective protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CYB_1662 zinc carboxypeptidase family protein K14054 mpaA; murein peptide amidase A
D CYB_1746 conserved hypothetical protein TIGR00044 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CYB_0083 conserved hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D CYB_0852 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D CYB_0141 ABC1 domain protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
D CYB_2081 DoxX family protein K15977 K15977; putative oxidoreductase
D CYB_2836 phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
D CYB_0240 putative acetyl coenzyme A synthetase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CYB_0055 conserved hypothetical protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
C 99975 Protein processing
D CYB_0683 clpS-1; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CYB_2568 clpS-2; ATP-dependent Clp protease adaptor protein clpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CYB_0082 tig; trigger factor K03545 tig; trigger factor
D CYB_2018 ureE; urease accessory protein K03187 ureE; urease accessory protein
D CYB_2540 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein
D CYB_0877 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D CYB_0878 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein
D CYB_0271 HupE/UreJ family protein K03192 ureJ; urease accessory protein
D CYB_1264 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CYB_2718 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
D CYB_0067 peptidase, T1 family K07395 K07395; putative proteasome-type protease
D CYB_0242 OsmC family protein K07397 yhfA; putative redox protein
D CYB_0626 cytochrome c-type biogenesis protein ResB, putative K07399 resB; cytochrome c biogenesis protein
D CYB_0330 xanthine dehydrogenase accessory factor, putative K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D CYB_0273 putative methylated-DNA-[protein]-cysteine S-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D CYB_1724 conserved hypothetical protein K07445 K07445; putative DNA methylase
D CYB_0019 ISSoc2, resolvase K07450 K07450; putative resolvase
D CYB_0025 ISSoc2, resolvase K07450 K07450; putative resolvase
D CYB_1994 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D CYB_2119 conserved hypothetical protein TIGR00252 K07460 yraN; putative endonuclease
D CYB_0678 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D CYB_0529 ISSoc10, orfA transposase K07491 rayT; REP-associated tyrosine transposase
D CYB_0353 ISSoc9, transposase K07496 K07496; putative transposase
D CYB_2312 ISSoc11, transposase orfB K07496 K07496; putative transposase
D CYB_2313 ISSoc11, transposase orfA K07496 K07496; putative transposase
D CYB_2484 ISSoc11, transposase orfA K07496 K07496; putative transposase
D CYB_2485 ISSoc11, transposase orfB K07496 K07496; putative transposase
D CYB_2174 ISSoc7, transposase K07496 K07496; putative transposase
D CYB_2223 ISSoc11, transposase orfA, truncation K07496 K07496; putative transposase
D CYB_2224 ISSoc11, transposase orfB K07496 K07496; putative transposase
D CYB_2263 ISSoc9, transposase K07496 K07496; putative transposase
D CYB_2696 ISSoc12, transposase K07496 K07496; putative transposase
D CYB_2714 ISSoc9, transposase K07496 K07496; putative transposase
D CYB_1053 putative transposase K07496 K07496; putative transposase
D CYB_1090 ISSoc11, transposase orfB K07496 K07496; putative transposase
D CYB_1091 ISSoc11, transposase orfA K07496 K07496; putative transposase
D CYB_1140 transposase, truncation K07496 K07496; putative transposase
D CYB_1210 ISSoc2, transposase, truncation K07496 K07496; putative transposase
D CYB_2925 ISSoc9, transposase K07496 K07496; putative transposase
D CYB_0018 ISSoc2, transposase K07496 K07496; putative transposase
D CYB_0026 ISSoc2, transposase K07496 K07496; putative transposase
D CYB_0518 ISSoc9, transposase K07496 K07496; putative transposase
D CYB_0530 ISSoc10, orfB transposase K07496 K07496; putative transposase
D CYB_0814 ISSoc9, transposase K07496 K07496; putative transposase
D CYB_0074 ISSoc11, transposase orfA K07496 K07496; putative transposase
D CYB_0075 ISSoc11, transposase orfB K07496 K07496; putative transposase
D CYB_0247 ISSoc9, transposase K07496 K07496; putative transposase
D CYB_1591 ISSoc14, transposase K07496 K07496; putative transposase
D CYB_2701 ISSoc8, transposase K07496 K07496; putative transposase
D CYB_2707 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2735 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2657 ISSoc8, transposase K07496 K07496; putative transposase
D CYB_2835 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2910 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_0081 ISSoc8, transposase K07496 K07496; putative transposase
D CYB_0087 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1688 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_0258 ISSoc8, transposase K07496 K07496; putative transposase
D CYB_0233 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_0329 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_0472 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_0548 ISSoc8, transposase K07496 K07496; putative transposase
D CYB_0598 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_0620 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_0630 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1722 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1742 ISSoc8, transposase K07496 K07496; putative transposase
D CYB_1042 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2454 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2468 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2521 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2538 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2557 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2071 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2147 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2026 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1759 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1023 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_0979 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1826 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1872 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2117 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2126 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1151 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1195 ISSoc8, transposase K07496 K07496; putative transposase
D CYB_1201 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_2410 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1227 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1259 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1322 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1450 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_1297 ISSoc1, transposase K07496 K07496; putative transposase
D CYB_0041 ISSoc1, transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D CYB_0442 pspA/IM30 family protein K03969 pspA; phage shock protein A
D CYB_0128 pspA/IM30 family protein K03969 pspA; phage shock protein A
D CYB_2894 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
D CYB_0803 phrB-2; deoxyribodipyrimidine photolyase K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CYB_0528 sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D CYB_0718 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D CYB_0681 transporter, solute:sodium symporter (SSS) family K03307 TC.SSS; solute:Na+ symporter, SSS family
D CYB_0212 conserved hypothetical protein K07242 K07242; putative multicomponent Na+:H+ antiporter subunit B
C 99978 Cell growth
D CYB_2239 R3H domain protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D CYB_2260 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D CYB_2320 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CYB_0490 kaiA; circadian clock protein KaiA K08480 kaiA; circadian clock protein KaiA
D CYB_0489 kaiB; circadian clock protein KaiB K08481 kaiB; circadian clock protein KaiB
D CYB_0488 kaiC; circadian clock protein kinase KaiC K08482 kaiC; circadian clock protein KaiC
D CYB_0891 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D CYB_1558 transporter, membrane fusion protein (MFP) family K02005 ABC.CD.TX; HlyD family secretion protein
D CYB_2890 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CYB_0195 conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
D CYB_1833 gvpA; gas vesicle protein A K23262 gvpA; gas vesicle structural protein
C 99994 Others
D CYB_2526 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D CYB_2195 cutA; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D CYB_0166 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D CYB_2269 putative iron-regulated protein A K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CYB_0885 putative helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D CYB_0463 phospholipase, patatin family K07001 K07001; NTE family protein
D CYB_1405 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CYB_1402 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CYB_1029 YihY family protein K07058 K07058; membrane protein
D CYB_0143 Fe-S metabolism protein, SufE family K02426 sufE; cysteine desulfuration protein SufE
D CYB_1372 psbN; photosystem II reaction center protein PsbN K02715 psbN; PsbN protein
D CYB_2362 putative membrane protein K08972 K08972; putative membrane protein
C 99997 Function unknown
D CYB_2419 ankyrin repeat protein K06867 K06867; uncharacterized protein
D CYB_2430 ankyrin repeat protein K06867 K06867; uncharacterized protein
D CYB_1280 conserved hypothetical protein K06872 K06872; uncharacterized protein
D CYB_1339 DRTGG domain protein K06873 K06873; uncharacterized protein
D CYB_2759 GTP-binding domain protein K06883 K06883; uncharacterized protein
D CYB_1363 GTP-binding protein K06883 K06883; uncharacterized protein
D CYB_2904 GTP-binding domain protein K06883 K06883; uncharacterized protein
D CYB_0045 HD domain protein K06885 K06885; uncharacterized protein
D CYB_1320 conserved hypothetical protein K06888 K06888; uncharacterized protein
D CYB_2233 conserved hypothetical protein K06923 K06923; uncharacterized protein
D CYB_1486 putative small GTP-binding protein K06945 K06945; uncharacterized protein
D CYB_0447 conserved hypothetical protein K06960 K06960; uncharacterized protein
D CYB_2120 conserved hypothetical protein K06962 K06962; uncharacterized protein
D CYB_2279 btpA; photosystem I biogenesis protein BtpA K06971 K06971; uncharacterized protein
D CYB_2867 X-Pro dipeptidyl-peptidase (S15 family) K06978 K06978; uncharacterized protein
D CYB_1138 glyoxalase family protein K06991 K06991; uncharacterized protein
D CYB_2093 conserved hypothetical protein K07000 K07000; uncharacterized protein
D CYB_2765 endonuclease/exonuclease/phosphatase family protein K07004 K07004; uncharacterized protein
D CYB_1835 V4R domain protein K07013 K07013; uncharacterized protein
D CYB_1838 V4R domain protein K07013 K07013; uncharacterized protein
D CYB_0572 putative bacteriochlorophyll 4-vinyl reductase K07013 K07013; uncharacterized protein
D CYB_0576 V4R domain protein K07013 K07013; uncharacterized protein
D CYB_2654 conserved hypothetical protein K07028 K07028; uncharacterized protein
D CYB_2452 NAD-dependent epimerase/dehydratase family protein K07071 K07071; uncharacterized protein
D CYB_0907 nucleotidyltransferase domain protein K07075 K07075; uncharacterized protein
D CYB_1525 oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein
D CYB_1767 oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein
D CYB_1909 putative permease K07089 K07089; uncharacterized protein
D CYB_0652 putative membrane protein K07090 K07090; uncharacterized protein
D CYB_1988 conserved hypothetical protein K07093 K07093; uncharacterized protein
D CYB_0829 Ser/Thr protein phosphatase family protein superfamily K07096 K07096; uncharacterized protein
D CYB_0478 purine phosphoribosyltransferase, putative K07101 K07101; uncharacterized protein
D CYB_2571 putative membrane protein K07120 K07120; uncharacterized protein
D CYB_1484 roadblock/LC7 domain family K07131 K07131; uncharacterized protein
D CYB_0120 MOSC domain protein K07140 K07140; MOSC domain-containing protein
D CYB_0560 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein
D CYB_0119 conserved hypothetical protein K08999 K08999; uncharacterized protein
D CYB_1778 conserved hypothetical protein K09005 K09005; uncharacterized protein
D CYB_0372 putative membrane protein K09118 K09118; uncharacterized protein
D CYB_0153 conserved hypothetical protein K09137 K09137; uncharacterized protein
D CYB_1509 conserved hypothetical protein K09141 K09141; uncharacterized protein
D CYB_2466 conserved hypothetical protein K09763 K09763; uncharacterized protein
D CYB_1858 putative membrane protein K09775 K09775; uncharacterized protein
D CYB_1009 putative outer membrane protein K09807 K09807; uncharacterized protein
D CYB_0498 conserved hypothetical protein K09919 K09919; uncharacterized protein
D CYB_2148 putative membrane protein K09928 K09928; uncharacterized protein
D CYB_0334 Rho termination factor, N-terminal domain protein K09942 K09942; uncharacterized protein
D CYB_1129 conserved hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 10, 2024