+D GENES KO
#
KEGG Orthology (KO) - Deinococcus geothermalis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:dge00010]
D Dgeo_0242 ROK domain protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dgeo_1304 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dgeo_1637 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dgeo_1876 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Dgeo_2083 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dgeo_1135 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Dgeo_1133 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Dgeo_1134 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Dgeo_2228 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dgeo_2232 Phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Dgeo_0004 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dgeo_0005 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dgeo_0621 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Dgeo_1887 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Dgeo_1561 2-oxoisovalerate dehydrogenase, OdbA K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Dgeo_1562 2-oxoisovalerate dehydrogenase, OdbB K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Dgeo_1886 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Dgeo_0353 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_2323 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_1750 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_1759 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_2396 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_2798 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Dgeo_2023 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Dgeo_1875 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dgeo_0575 ROK domain protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D Dgeo_1196 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Dgeo_2620 PTS system D-glucose-specific IIB component, Glc family / PTS system D-glucose-specific IIC component, Glc family / PTS system D-glucose-specific IIA component, Glc family K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:dge00020]
D Dgeo_1526 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D Dgeo_2245 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Dgeo_2246 HMGL-like domain protein K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D Dgeo_1682 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Dgeo_1166 isocitrate/isopropylmalate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Dgeo_0140 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Dgeo_0139 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dgeo_0353 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_2323 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_1089 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Dgeo_1088 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Dgeo_0887 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dgeo_0886 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dgeo_0889 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Dgeo_0888 succinate dehydrogenase, cytochrome b subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Dgeo_2328 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Dgeo_2161 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dgeo_1196 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Dgeo_1887 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Dgeo_1561 2-oxoisovalerate dehydrogenase, OdbA K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Dgeo_1562 2-oxoisovalerate dehydrogenase, OdbB K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Dgeo_1886 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:dge00030]
D Dgeo_1304 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dgeo_1974 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Dgeo_1976 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Dgeo_1973 6-phosphogluconate dehydrogenase related protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Dgeo_1319 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Dgeo_2283 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Dgeo_1102 transaldolase, putative K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Dgeo_1265 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Dgeo_1266 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Dgeo_1072 Sugar kinase, ribokinase family K00852 rbsK; ribokinase [EC:2.7.1.15]
D Dgeo_1142 Fructokinase RbsK K00852 rbsK; ribokinase [EC:2.7.1.15]
D Dgeo_0586 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Dgeo_1875 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dgeo_0452 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Dgeo_2816 2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Dgeo_2812 2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Dgeo_2817 carbohydrate kinase, FGGY K25031 gntK; gluconokinase [EC:2.7.1.12]
D Dgeo_2815 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Dgeo_2615 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Dgeo_2083 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dgeo_1876 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Dgeo_1637 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:dge00040]
D Dgeo_2649 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dgeo_1319 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Dgeo_2691 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D Dgeo_2863 carbohydrate kinase, FGGY K00854 xylB; xylulokinase [EC:2.7.1.17]
D Dgeo_2692 Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Dgeo_2455 Rhamnose isomerase related protein K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D Dgeo_2453 carbohydrate kinase, FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D Dgeo_2864 Alcohol dehydrogenase GroES-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:dge00051]
D Dgeo_1421 Fructokinase, ScrK K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dgeo_0321 mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Dgeo_0341 mannose-6-phosphate isomerase, type 2 K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Dgeo_2648 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Dgeo_2455 Rhamnose isomerase related protein K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D Dgeo_2453 carbohydrate kinase, FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D Dgeo_1637 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dgeo_1876 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Dgeo_2174 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Dgeo_2864 Alcohol dehydrogenase GroES-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D Dgeo_2692 Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Dgeo_2866 Mannitol dehydrogenase-like protein K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67]
D Dgeo_2083 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dgeo_1135 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Dgeo_2175 PTS system D-fructose-specific IIC component (F1P-forming), Frc family / PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:dge00052]
D Dgeo_2798 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Dgeo_2023 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Dgeo_2481 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dgeo_2480 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Dgeo_2242 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dgeo_1875 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dgeo_0242 ROK domain protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dgeo_2829 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D Dgeo_2530 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Dgeo_2828 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Dgeo_1637 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dgeo_2811 Mandelate racemase/muconate lactonizing enzyme-like protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D Dgeo_0475 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Dgeo_0672 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:dge00053]
D Dgeo_2649 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dgeo_2417 NAD-dependent epimerase/dehydratase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:dge00500]
D Dgeo_0475 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Dgeo_0672 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Dgeo_0572 amylosucrase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D Dgeo_2862 broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Dgeo_2693 glycoside hydrolase, family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Dgeo_0861 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Dgeo_1988 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21]
D Dgeo_0981 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Dgeo_1198 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Dgeo_0537 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Dgeo_0611 isoamylase / pullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D Dgeo_2916 Alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D Dgeo_0725 Glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3]
D Dgeo_0667 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Dgeo_0541 isoamylase K01214 ISA; isoamylase [EC:3.2.1.68]
D Dgeo_0539 maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D Dgeo_0540 maltooligosyl trehalose hydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D Dgeo_0060 trehalose 6-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D Dgeo_0059 trehalose 6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D Dgeo_1875 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dgeo_0242 ROK domain protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dgeo_1304 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dgeo_1421 Fructokinase, ScrK K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dge00520]
D Dgeo_1079 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Dgeo_2780 glycoside hydrolase, family 3-like protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Dgeo_0686 glycoside hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dgeo_2623 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Dgeo_1421 Fructokinase, ScrK K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Dgeo_0010 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dgeo_2624 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dgeo_1664 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Dgeo_1967 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Dgeo_2507 hypothetical protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D Dgeo_2508 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Dgeo_1386 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Dgeo_1632 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Dgeo_1173 ROK domain protein K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D Dgeo_2395 N-acylglucosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D Dgeo_1294 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Dgeo_2650 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D Dgeo_2690 glycoside hydrolase, family 52 K22268 xylA; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D Dgeo_2620 PTS system D-glucose-specific IIB component, Glc family / PTS system D-glucose-specific IIC component, Glc family / PTS system D-glucose-specific IIA component, Glc family K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D Dgeo_0242 ROK domain protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dgeo_0575 ROK domain protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D Dgeo_1875 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dgeo_2649 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dgeo_2481 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dgeo_2480 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Dgeo_2242 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dgeo_2530 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Dgeo_1304 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dgeo_0321 mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Dgeo_0341 mannose-6-phosphate isomerase, type 2 K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Dgeo_2648 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Dgeo_2646 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D Dgeo_0861 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:dge00620]
D Dgeo_1750 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_1759 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_2396 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_1887 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Dgeo_1561 2-oxoisovalerate dehydrogenase, OdbA K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Dgeo_1562 2-oxoisovalerate dehydrogenase, OdbB K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Dgeo_1886 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Dgeo_0353 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_2323 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_0052 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Dgeo_0051 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Dgeo_0005 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dgeo_2176 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Dgeo_0467 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dgeo_0466 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dgeo_2177 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Dgeo_0509 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Dgeo_0626 Glycolate oxidase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4]
D Dgeo_2410 FAD linked oxidase-like protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D Dgeo_2681 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Dgeo_2261 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Dgeo_2493 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Dgeo_2154 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Dgeo_2155 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Dgeo_2161 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dgeo_2328 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Dgeo_0661 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Dgeo_1196 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Dgeo_0621 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Dgeo_2616 Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D Dgeo_2611 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D Dgeo_1441 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0755 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1883 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0599 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Dgeo_1257 Homocitrate synthase K01655 LYS21; homocitrate synthase [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dge00630]
D Dgeo_1287 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D Dgeo_1750 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_1759 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_2396 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_2616 Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D Dgeo_2611 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D Dgeo_2161 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dgeo_1526 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D Dgeo_2245 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Dgeo_1682 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Dgeo_1441 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0755 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1883 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1790 Glyoxalase/bleomycin resistance protein/dioxygenase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Dgeo_1320 methylmalonyl-CoA mutase, beta subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Dgeo_1541 methylmalonyl-CoA mutase, alpha subunit K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Dgeo_0862 methylmalonyl-CoA mutase, alpha subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Dgeo_0624 Glycolate oxidase subunit, GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Dgeo_0623 Glycolate oxidase, Fe-S subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Dgeo_2728 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Dgeo_1114 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Dgeo_1203 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_1204 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_0221 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dgeo_1907 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Dgeo_1905 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dgeo_0353 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_2323 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_1906 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Dgeo_2612 Glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D Dgeo_2613 Hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D Dgeo_2614 tartronate semialdehyde reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D Dgeo_2615 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Dgeo_2816 2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Dgeo_2812 2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Dgeo_2746 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Dgeo_1533 Kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D Dgeo_1488 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:dge00640]
D Dgeo_1750 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_1759 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_2396 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_0052 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Dgeo_0051 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Dgeo_2338 2-oxoisovalerate dehydrogenase, OdbA K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Dgeo_2339 2-oxoisovalerate dehydrogenase, ODBB K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Dgeo_2341 Dihydrolipoamide acyltransferase, (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Dgeo_0353 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_2323 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_1229 Alcohol dehydrogenase, zinc-binding protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D Dgeo_2176 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Dgeo_0467 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dgeo_0466 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dgeo_2177 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Dgeo_0989 4-aminobutyrate aminotransferase apoenzyme K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Dgeo_1790 Glyoxalase/bleomycin resistance protein/dioxygenase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Dgeo_1320 methylmalonyl-CoA mutase, beta subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Dgeo_1541 methylmalonyl-CoA mutase, alpha subunit K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Dgeo_0862 methylmalonyl-CoA mutase, alpha subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Dgeo_1088 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Dgeo_1089 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Dgeo_0241 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:dge00650]
D Dgeo_1441 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0755 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1883 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1444 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Dgeo_0754 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Dgeo_0617 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Dgeo_1595 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Dgeo_1383 acetate and butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D Dgeo_0887 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dgeo_0886 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dgeo_0889 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Dgeo_0888 succinate dehydrogenase, cytochrome b subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Dgeo_0989 4-aminobutyrate aminotransferase apoenzyme K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Dgeo_1120 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Dgeo_1306 3-oxoacid CoA-transferase, subunit B K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D Dgeo_0808 3-oxoacid CoA-transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D Dgeo_0809 3-oxoacid CoA-transferase, subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D Dgeo_0952 short-chain dehydrogenase/reductase SDR K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Dgeo_0602 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dgeo_0601 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:dge00660]
D Dgeo_0602 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dgeo_0601 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dgeo_1088 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Dgeo_1089 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Dgeo_1030 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Dgeo_1032 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Dgeo_1033 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:dge00562]
D Dgeo_0795 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Dgeo_1135 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:dge00190]
D Dgeo_0909 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Dgeo_0910 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Dgeo_0911 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Dgeo_0912 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Dgeo_0913 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Dgeo_0914 NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Dgeo_0915 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Dgeo_0916 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Dgeo_0917 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Dgeo_0918 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Dgeo_0919 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Dgeo_0920 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Dgeo_0921 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Dgeo_0922 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Dgeo_1949 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Dgeo_0887 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Dgeo_0886 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Dgeo_0889 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Dgeo_0888 succinate dehydrogenase, cytochrome b subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Dgeo_0408 Cytochrome c oxidase assembly factor, CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D Dgeo_0017 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Dgeo_0406 cytochrome c oxidase, subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9]
D Dgeo_0407 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Dgeo_0016 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Dgeo_0409 cytochrome oxidase assembly protein, CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D Dgeo_2705 cytochrome bd quinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Dgeo_2704 cytochrome bd quinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Dgeo_2047 V-type H+-ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D Dgeo_2046 V-type H+-ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D Dgeo_2049 V-type H+-ATPase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D Dgeo_2045 V-type H+-ATPase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D Dgeo_2050 V-type H+-ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D Dgeo_2048 V-type H+-ATPase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D Dgeo_2052 V-type H+-ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D Dgeo_2051 V-type H+-ATPase, subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D Dgeo_0973 inorganic pyrophosphatase-related protein K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Dgeo_0836 Inorganic pyrophosphatase related protein K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Dgeo_0332 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D Dgeo_0438 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:dge00680]
D Dgeo_2296 Alcohol dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D Dgeo_2746 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Dgeo_0221 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dgeo_1114 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Dgeo_2615 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Dgeo_0004 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dgeo_0661 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Dgeo_2161 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dgeo_2083 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Dgeo_1876 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Dgeo_1637 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dgeo_0052 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Dgeo_0051 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Dgeo_1750 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_1759 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_2396 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_0621 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Dgeo_2228 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dgeo_2232 Phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Dgeo_0710 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dgeo_1318 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D Dgeo_1156 lysine biosynthesis protein, homoaconitate hydratase family protein K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114]
D Dgeo_1154 lysine biosynthesis protein, homoaconitate hydratase K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
C 00910 Nitrogen metabolism [PATH:dge00910]
D Dgeo_2389 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Dgeo_2390 assimilatory nitrate reductase, catalytic subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D Dgeo_2391 Nitrite reductase (NAD(P)H) large subunit, NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D Dgeo_2392 Nitrite reductase (NAD(P)H) large subunit, NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D Dgeo_1493 putative 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Dgeo_1494 2-nitropropane dioxygenase, NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Dgeo_0495 Glu/Leu/Phe/Val dehydrogenase, dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dgeo_0494 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dgeo_1203 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_1204 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_2626 Glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Dgeo_2627 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Dgeo_2193 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:dge00920]
D Dgeo_1411 ABC transporter, substrate-binding protein, aliphatic sulfonate K15553 ssuA; sulfonate transport system substrate-binding protein
D Dgeo_0543 ABC transporter, substrate-binding protein, aliphatic sulfonate K15553 ssuA; sulfonate transport system substrate-binding protein
D Dgeo_1412 ABC transporter, permease, aliphatic sulfonate K15554 ssuC; sulfonate transport system permease protein
D Dgeo_1413 ABC transporter, ATPase, aliphatic sulfonate K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dgeo_1410 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Dgeo_1408 Adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Dgeo_1290 phosphoesterase, RecJ-like protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Dgeo_1409 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Dgeo_1407 Ferredoxin--sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D Dgeo_2712 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Dgeo_0159 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dgeo_2206 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dgeo_0348 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dgeo_1657 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Dgeo_0517 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Dgeo_0807 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Dgeo_0105 acyl-CoA dehydrogenase-like protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:dge00061]
D Dgeo_2176 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Dgeo_0467 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Dgeo_0466 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Dgeo_2177 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Dgeo_0436 acyl carrier protein K02078 acpP; acyl carrier protein
D Dgeo_0434 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Dgeo_0433 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dgeo_0437 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dgeo_1963 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_0435 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_0109 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_1182 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Dgeo_0260 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Dgeo_0121 fatty acid desaturase, type 2 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D Dgeo_1070 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:dge00071]
D Dgeo_1441 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0755 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1883 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0618 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dgeo_0754 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Dgeo_0617 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Dgeo_0736 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Dgeo_2399 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Dgeo_1221 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dgeo_2761 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dgeo_1070 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:dge00561]
D Dgeo_2615 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Dgeo_2522 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Dgeo_1834 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Dgeo_1788 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dgeo_0177 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dgeo_2308 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dgeo_0026 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dgeo_2221 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dgeo_0525 alpha/beta hydrolase fold protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D Dgeo_2160 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Dgeo_0559 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Dgeo_1184 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D Dgeo_0515 glycosyl transferase, family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D Dgeo_2828 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:dge00564]
D Dgeo_2043 Glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Dgeo_2521 Glycerol-3-phosphate dehydrogenase, GlpA K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Dgeo_1788 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dgeo_0177 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dgeo_2308 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dgeo_0026 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dgeo_2221 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dgeo_1506 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dgeo_2661 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Dgeo_1045 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Dgeo_1011 Phospholipase D-like domains K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:dge00600]
D Dgeo_2828 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Dgeo_0686 glycoside hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:dge00592]
D Dgeo_0618 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:dge01040]
D Dgeo_0121 fatty acid desaturase, type 2 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:dge00230]
D Dgeo_1808 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Dgeo_0075 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Dgeo_0586 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Dgeo_1875 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dgeo_0452 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Dgeo_0063 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Dgeo_1347 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Dgeo_1546 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Dgeo_0064 phosphoribosylformylglycinamidine synthase subunit II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Dgeo_0066 phosphoribosylformylglycinamidine synthetase PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Dgeo_0065 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Dgeo_1616 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Dgeo_0081 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Dgeo_0082 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Dgeo_0067 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Dgeo_0688 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Dgeo_0513 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Dgeo_1550 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Dgeo_0847 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Dgeo_2368 5'-Nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Dgeo_2751 5'-Nucleotidase-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Dgeo_0040 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Dgeo_1596 purine and other phosphorylase, family 1 K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Dgeo_1497 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Dgeo_0261 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Dgeo_1588 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Dgeo_0548 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Dgeo_1689 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Dgeo_0682 Inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D Dgeo_2209 Xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Dgeo_0491 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D Dgeo_2603 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D Dgeo_2604 Xanthine dehydrogenase, molybdopterin-binding subunit B K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D Dgeo_0598 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Dgeo_2606 amidohydrolase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D Dgeo_2284 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Dgeo_1774 Ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dgeo_0251 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dgeo_1775 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Dgeo_1804 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Dgeo_2274 Predicted HD superfamily hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Dgeo_3047 Predicted hydrolase of HD superfamily K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Dgeo_1308 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Dgeo_2319 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Dgeo_0205 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Dgeo_0420 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D Dgeo_0627 2, 3 -cyclic-nucleotide 2 -phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D Dgeo_0662 metallophosphoesterase K24670 K24670; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / phosphoenolpyruvate phosphatase [EC:3.1.4.16 3.1.3.60]
D Dgeo_1846 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Dgeo_1007 NUDIX hydrolase K18445 ndx1; diadenosine hexaphosphate hydrolase (ATP-forming) [EC:3.6.1.61]
D Dgeo_1408 Adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Dgeo_1410 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Dgeo_2601 Urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
D Dgeo_2602 Transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Dgeo_2600 hypothetical protein K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D Dgeo_2609 dihydroorotase, multifunctional complex type K01466 allB; allantoinase [EC:3.5.2.5]
D Dgeo_2610 Amidase, hydantoinase/carbamoylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Dgeo_2608 double stranded beta-helix domain containing protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
C 00240 Pyrimidine metabolism [PATH:dge00240]
D Dgeo_2070 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Dgeo_2060 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Dgeo_0503 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Dgeo_0502 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Dgeo_0500 Dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Dgeo_0138 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Dgeo_1404 Orotidine 5'-phosphate decarboxylase subfamily 2 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Dgeo_1047 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Dgeo_1689 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Dgeo_1267 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Dgeo_0827 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Dgeo_2220 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Dgeo_0202 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Dgeo_2368 5'-Nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Dgeo_2751 5'-Nucleotidase-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Dgeo_0040 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Dgeo_1296 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Dgeo_0504 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Dgeo_0627 2, 3 -cyclic-nucleotide 2 -phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D Dgeo_0357 Indigoidine synthase A like protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D Dgeo_1286 Cytidine deaminase, homotetrameric K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Dgeo_1880 Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Dgeo_1774 Ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dgeo_0251 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dgeo_1775 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Dgeo_2274 Predicted HD superfamily hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Dgeo_3047 Predicted hydrolase of HD superfamily K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Dgeo_1983 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Dgeo_0578 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D Dgeo_2027 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Dgeo_0662 metallophosphoesterase K24670 K24670; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / phosphoenolpyruvate phosphatase [EC:3.1.4.16 3.1.3.60]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:dge00250]
D Dgeo_1627 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dgeo_1162 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Dgeo_0094 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Dgeo_1114 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Dgeo_0771 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Dgeo_2067 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Dgeo_2065 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Dgeo_0205 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Dgeo_0688 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Dgeo_0503 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Dgeo_0989 4-aminobutyrate aminotransferase apoenzyme K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Dgeo_1120 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Dgeo_2626 Glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Dgeo_2627 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Dgeo_0495 Glu/Leu/Phe/Val dehydrogenase, dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dgeo_0494 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dgeo_1174 aldehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Dgeo_0850 delta-1-pyrroline-5-carboxylate dehydrogenase 2 K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Dgeo_1203 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_1204 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_2070 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Dgeo_2060 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Dgeo_0065 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Dgeo_0010 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dgeo_2624 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dgeo_0063 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:dge00260]
D Dgeo_1127 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dgeo_1782 Aspartate-semialdehyde dehydrogenase, USG-1 related protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Dgeo_0610 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Dgeo_2253 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Dgeo_2485 aminoglycoside phosphotransferase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D Dgeo_2252 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Dgeo_1451 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Dgeo_0221 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dgeo_1114 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Dgeo_2615 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Dgeo_2228 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dgeo_2232 Phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Dgeo_0710 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dgeo_0057 7-keto-8-aminopelargonate synthetase-like enzyme K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Dgeo_0449 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D Dgeo_1827 Flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dgeo_1907 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Dgeo_1905 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dgeo_0353 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_2323 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_1906 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Dgeo_1331 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Dgeo_1332 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Dgeo_1794 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Dgeo_2922 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Dgeo_1025 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Dgeo_1024 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:dge00270]
D Dgeo_0348 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Dgeo_1657 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Dgeo_0781 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Dgeo_1336 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Dgeo_0287 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Dgeo_0776 Adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Dgeo_0261 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Dgeo_0011 Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Dgeo_2248 S-ribosylhomocysteinase, LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D Dgeo_1127 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dgeo_1782 Aspartate-semialdehyde dehydrogenase, USG-1 related protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Dgeo_0610 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Dgeo_0517 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Dgeo_0807 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Dgeo_0225 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Dgeo_0518 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Dgeo_2743 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dgeo_1627 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dgeo_0159 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dgeo_2206 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dgeo_2161 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Dgeo_1331 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Dgeo_1332 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Dgeo_0710 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:dge00280]
D Dgeo_2743 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dgeo_0203 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Dgeo_2338 2-oxoisovalerate dehydrogenase, OdbA K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Dgeo_2339 2-oxoisovalerate dehydrogenase, ODBB K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Dgeo_2341 Dihydrolipoamide acyltransferase, (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Dgeo_0353 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_2323 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_0736 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Dgeo_2399 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Dgeo_0618 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dgeo_1790 Glyoxalase/bleomycin resistance protein/dioxygenase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Dgeo_1320 methylmalonyl-CoA mutase, beta subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Dgeo_1541 methylmalonyl-CoA mutase, alpha subunit K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Dgeo_0862 methylmalonyl-CoA mutase, alpha subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Dgeo_1081 6-phosphogluconate dehydrogenase, NAD-binding protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Dgeo_1306 3-oxoacid CoA-transferase, subunit B K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D Dgeo_0808 3-oxoacid CoA-transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D Dgeo_0809 3-oxoacid CoA-transferase, subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D Dgeo_1441 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0755 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1883 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dge00290]
D Dgeo_1794 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Dgeo_2922 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Dgeo_1030 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Dgeo_1032 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Dgeo_1033 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Dgeo_0602 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dgeo_0601 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dgeo_0600 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Dgeo_1240 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Dgeo_2743 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dgeo_0203 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Dgeo_0599 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:dge00300]
D Dgeo_0610 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Dgeo_1127 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dgeo_1782 Aspartate-semialdehyde dehydrogenase, USG-1 related protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Dgeo_2069 succinyldiaminopimelate aminotransferase apoenzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Dgeo_0790 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Dgeo_1257 Homocitrate synthase K01655 LYS21; homocitrate synthase [EC:2.3.3.14]
D Dgeo_1156 lysine biosynthesis protein, homoaconitate hydratase family protein K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114]
D Dgeo_1154 lysine biosynthesis protein, homoaconitate hydratase K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
D Dgeo_1458 3-isopropylmalate dehydrogenase K05824 LYS12; homoisocitrate dehydrogenase [EC:1.1.1.87]
D Dgeo_2084 valine-pyruvate aminotransferase apoenzyme K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Dgeo_1152 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D Dgeo_1151 Lysine biosynthesis enzyme LysX K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43]
D Dgeo_0678 N-acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D Dgeo_0685 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D Dgeo_1416 N2-acetyl-L-lysine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D Dgeo_1391 N2-acetyl-L-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
D Dgeo_0099 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Dgeo_1723 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:dge00310]
D Dgeo_0139 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dgeo_0353 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_2323 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_1221 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dgeo_2761 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dgeo_1441 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0755 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1883 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1120 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Dgeo_0988 Lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:dge00220]
D Dgeo_1605 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Dgeo_2067 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Dgeo_2065 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Dgeo_0292 arginase K01476 rocF; arginase [EC:3.5.3.1]
D Dgeo_0268 Nitric-oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D Dgeo_0065 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Dgeo_1203 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_1204 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_0495 Glu/Leu/Phe/Val dehydrogenase, dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dgeo_0494 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dgeo_1627 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dgeo_2061 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Dgeo_0742 N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Dgeo_0079 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Dgeo_1604 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Dgeo_1152 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D Dgeo_0678 N-acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D Dgeo_0685 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D Dgeo_1416 N2-acetyl-L-lysine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D Dgeo_1391 N2-acetyl-L-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00330 Arginine and proline metabolism [PATH:dge00330]
D Dgeo_2442 Hydantoinase/oxoprolinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D Dgeo_1771 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Dgeo_2732 Arginase/agmatinase/formiminoglutamase K01480 speB; agmatinase [EC:3.5.3.11]
D Dgeo_0034 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D Dgeo_0036 Nitrilase/cyanide hydratase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D Dgeo_1317 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D Dgeo_1827 Flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dgeo_1333 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Dgeo_0268 Nitric-oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D Dgeo_0292 arginase K01476 rocF; arginase [EC:3.5.3.1]
D Dgeo_0841 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Dgeo_0851 Proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D Dgeo_1174 aldehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Dgeo_0850 delta-1-pyrroline-5-carboxylate dehydrogenase 2 K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Dgeo_0992 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Dgeo_0993 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Dgeo_0193 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Dgeo_1627 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:dge00340]
D Dgeo_0782 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Dgeo_0783 ATP phosphoribosyltransferase, Histidyl-tRNA synthetase-like protein K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Dgeo_1901 phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Dgeo_0980 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Dgeo_1900 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Dgeo_0979 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Dgeo_0118 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dgeo_2875 aminotransferase, class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dgeo_1608 Histidinol phosphate phosphatase, HisJ K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Dgeo_0584 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Dgeo_2730 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Dgeo_2735 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D Dgeo_2731 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D Dgeo_1827 Flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:dge00350]
D Dgeo_1627 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dgeo_0118 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dgeo_2875 aminotransferase, class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dgeo_1827 Flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dgeo_2418 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D Dgeo_2416 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D Dgeo_2413 5-carboxy-2-oxohept-3-enedioate decarboxylase HpaG2 subunit K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D Dgeo_2420 2-oxohept-3-enedioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D Dgeo_2421 2,4-dihydroxyhept-2-enedioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D Dgeo_1120 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:dge00360]
D Dgeo_1827 Flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dgeo_2409 Phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Dgeo_1918 Phenylacetate-CoA oxygenase, PaaA subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D Dgeo_1917 Phenylacetate-CoA oxygenase, PaaB subunit K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D Dgeo_1916 Phenylacetate-CoA oxygenase, PaaC subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D Dgeo_1915 Phenylacetate-CoA oxygenase, PaaD subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D Dgeo_1797 Enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D Dgeo_1913 Phenylacetic acid degradation protein PaaN K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D Dgeo_1444 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Dgeo_1627 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dgeo_0118 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dgeo_2875 aminotransferase, class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dgeo_1333 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Dgeo_0455 Rieske (2Fe-2S) region K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:dge00380]
D Dgeo_2857 Tryptophan 2,3-dioxygenase apoenzyme / Tryptophan 2,3-dioxygenase holoenzyme K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D Dgeo_1533 Kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D Dgeo_1534 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D Dgeo_0139 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dgeo_0353 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_2323 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_1221 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dgeo_2761 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dgeo_1441 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0755 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1883 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1827 Flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Dgeo_1333 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Dgeo_2728 Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dge00400]
D Dgeo_1821 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Dgeo_1572 chorismate mutase / 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D Dgeo_2474 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Dgeo_1732 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Dgeo_1733 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Dgeo_2375 Xylose isomerase-like protein TIM barrel K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D Dgeo_2374 Shikimate dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]
D Dgeo_1731 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Dgeo_1001 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Dgeo_1730 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Dgeo_0983 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Dgeo_0985 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Dgeo_0986 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Dgeo_2266 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Dgeo_1587 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Dgeo_1025 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Dgeo_1024 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Dgeo_1040 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Dgeo_1334 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Dgeo_1627 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dgeo_0118 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dgeo_2875 aminotransferase, class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:dge00410]
D Dgeo_1422 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Dgeo_0989 4-aminobutyrate aminotransferase apoenzyme K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Dgeo_0670 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:dge00430]
D Dgeo_1141 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dgeo_0771 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Dgeo_0051 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Dgeo_0052 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D Dgeo_1586 beta-lactamase-like protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:dge00450]
D Dgeo_0781 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Dgeo_1336 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Dgeo_0011 Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Dgeo_1576 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Dgeo_2772 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Dgeo_1410 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Dgeo_0724 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:dge00460]
D Dgeo_2862 broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Dgeo_1141 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dgeo_0094 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Dgeo_0221 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:dge00470]
D Dgeo_1380 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Dgeo_2121 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dgeo_0065 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Dgeo_2085 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Dgeo_0485 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Dgeo_1679 Mandelate racemase/muconate lactonizing enzyme-like protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D Dgeo_0790 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Dgeo_1766 FAD dependent oxidoreductase K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
C 00480 Glutathione metabolism [PATH:dge00480]
D Dgeo_1141 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dgeo_1803 LamB/YcsF K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Dgeo_1801 Urea carboxylase/allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D Dgeo_1802 Urea carboxylase/allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D Dgeo_1166 isocitrate/isopropylmalate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Dgeo_1973 6-phosphogluconate dehydrogenase related protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Dgeo_1974 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:dge00511]
D Dgeo_0686 glycoside hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dge00541]
D Dgeo_2242 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Dgeo_2530 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Dgeo_2649 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Dgeo_0340 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dgeo_2643 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dgeo_0192 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dgeo_2008 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Dgeo_2646 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D Dgeo_0321 mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Dgeo_0341 mannose-6-phosphate isomerase, type 2 K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Dgeo_2648 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Dgeo_1967 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Dgeo_1294 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:dge00550]
D Dgeo_1386 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Dgeo_1632 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Dgeo_1631 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Dgeo_0485 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Dgeo_0099 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Dgeo_2121 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dgeo_1723 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Dgeo_1051 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Dgeo_1461 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Dgeo_1630 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Dgeo_2464 PBP1 protein; transglycosylase, transpeptidase domain K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dgeo_0768 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dgeo_0147 peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:dge00552]
D Dgeo_1051 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Dgeo_1066 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Dgeo_2647 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Dgeo_1232 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Dgeo_1184 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D Dgeo_2160 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Dgeo_0559 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:dge00543]
D Dgeo_0348 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:dge00730]
D Dgeo_1924 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Dgeo_1919 hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Dgeo_1952 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dgeo_1920 glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D Dgeo_0994 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Dgeo_1921 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Dgeo_1923 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Dgeo_2364 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dgeo_3000 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dgeo_1939 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Dgeo_1846 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:dge00740]
D Dgeo_0302 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Dgeo_0300 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Dgeo_0303 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Dgeo_0301 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Dgeo_1809 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Dgeo_1808 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Dgeo_0075 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Dgeo_0182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:dge00750]
D Dgeo_0443 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Dgeo_0144 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Dgeo_1685 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D Dgeo_2252 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Dgeo_1106 pyridoxal phosphate synthase yaaD subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D Dgeo_1107 pyridoxal phosphate synthase yaaE subunit K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:dge00760]
D Dgeo_1162 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Dgeo_1164 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Dgeo_1163 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Dgeo_1325 Nicotinate phosphoribosyltransferase related protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Dgeo_1596 purine and other phosphorylase, family 1 K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Dgeo_1497 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Dgeo_2368 5'-Nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Dgeo_2751 5'-Nucleotidase-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Dgeo_0040 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Dgeo_0228 N-terminal TagD like nucleotidyl transferase domain-containing C-terminal MutT like hydrolase domain K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
D Dgeo_1327 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Dgeo_0299 NAD-dependent deacetylase, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Dgeo_1120 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:dge00770]
D Dgeo_0602 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Dgeo_0601 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Dgeo_0600 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Dgeo_1240 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Dgeo_0411 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Dgeo_0670 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Dgeo_1749 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Dgeo_2315 Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Dgeo_0286 Phosphopantetheine adenylyltransferase, CoaD K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Dgeo_0828 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Dgeo_1927 phosphopantetheine--protein transferase domain K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Dgeo_2743 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dgeo_1422 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:dge00780]
D Dgeo_0437 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dgeo_1963 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_0435 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_0109 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_1182 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Dgeo_0260 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Dgeo_2140 bifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:dge00785]
D Dgeo_1741 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Dgeo_1742 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Dgeo_0353 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_2323 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_1887 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Dgeo_1561 2-oxoisovalerate dehydrogenase, OdbA K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Dgeo_1562 2-oxoisovalerate dehydrogenase, OdbB K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Dgeo_1886 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Dgeo_0140 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Dgeo_0139 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Dgeo_2338 2-oxoisovalerate dehydrogenase, OdbA K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Dgeo_2339 2-oxoisovalerate dehydrogenase, ODBB K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Dgeo_2341 Dihydrolipoamide acyltransferase, (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Dgeo_1907 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Dgeo_1905 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dgeo_1906 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:dge00790]
D Dgeo_0206 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Dgeo_2364 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dgeo_3000 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dgeo_0397 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Dgeo_0398 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Dgeo_0396 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Dgeo_0083 Folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Dgeo_0333 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Dgeo_0302 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Dgeo_0497 aminodeoxychorismate lyase apoprotein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D Dgeo_1536 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Dgeo_0373 hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Dgeo_1762 Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Dgeo_0338 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Dgeo_0329 molybdopterin synthase subunit MoaD K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D Dgeo_0596 molybdopterin binding domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Dgeo_1944 MoeA-like protein, domain I and II K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Dgeo_0214 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D Dgeo_0283 molybdopterin-guanine dinucleotide biosynthesis protein A, putative K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:dge00670]
D Dgeo_0514 methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Dgeo_0699 methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Dgeo_0221 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Dgeo_1546 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Dgeo_0513 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Dgeo_2291 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Dgeo_1905 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Dgeo_1336 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Dgeo_2027 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Dgeo_1488 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Dgeo_1903 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:dge00860]
D Dgeo_1023 glutamyl-tRNA synthetase, class Ic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dgeo_1539 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dgeo_2128 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Dgeo_1942 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Dgeo_0882 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Dgeo_0093 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Dgeo_2393 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Dgeo_2131 uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D Dgeo_2129 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Dgeo_2287 putative transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D Dgeo_0408 Cytochrome c oxidase assembly factor, CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D Dgeo_0409 cytochrome oxidase assembly protein, CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D Dgeo_0274 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D Dgeo_2358 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Dgeo_2357 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D Dgeo_2356 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D Dgeo_2359 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D Dgeo_2361 Precorrin-6y C5,15-methyltransferase, subunit CbiE K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D Dgeo_2360 Precorrin-8X methylmutase CbiC/CobH K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D Dgeo_2349 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Dgeo_2352 cobaltochelatase CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Dgeo_0666 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Dgeo_2362 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Dgeo_2874 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Dgeo_2348 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Dgeo_2873 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase, CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Dgeo_2367 cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Dgeo_2872 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Dgeo_2366 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D Dgeo_2350 magnesium chelatase, ChlI subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Dgeo_0412 magnesium protoporphyrin chelatase, AAA class ATPase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dge00130]
D Dgeo_2322 4-hydroxybenzoate polyprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Dgeo_2240 Carboxylyase-related protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Dgeo_0182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Dgeo_0058 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Dgeo_0393 Mandelate racemase/muconate lactonizing enzyme-like protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D Dgeo_0199 PaaI-like thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Dgeo_2099 protein of unknown function DUF178 K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D Dgeo_2097 Thiamine biosynthesis enzyme ThiH, Radical SAM superfamily enzyme K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D Dgeo_0576 amidohydrolase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D Dgeo_0447 5'-methylthioadenosine S-adenosylhomocysteine nucleosidase related protein K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D Dgeo_1998 Radical SAM domain protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D Dgeo_1810 protein of unknown function DUF191 K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
D Dgeo_1878 flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:dge00900]
D Dgeo_0994 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Dgeo_1044 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Dgeo_0181 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Dgeo_0180 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Dgeo_0073 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Dgeo_0704 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Dgeo_1010 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Dgeo_1441 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0755 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1883 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Dgeo_1381 Isopentenyl-diphosphate delta-isomerase, FMN-dependent K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Dgeo_1618 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Dgeo_0020 undecaprenyl diphosphate synthase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D Dgeo_0496 Dimethylallyltransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:dge00906]
D Dgeo_0523 Phytoene synthase, CrtB K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Dgeo_0524 Phytoene dehydrogenase, CrtI K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D Dgeo_0857 Lycopene cyclase, beta and epsilon K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D Dgeo_2309 protein of unknown function DUF422 K22502 crtY; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:dge00907]
D Dgeo_0618 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Dgeo_2283 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:dge00523]
D Dgeo_0340 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dgeo_2643 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dgeo_0192 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dgeo_2008 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Dgeo_2057 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:dge00946]
D Dgeo_2862 broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Dgeo_2783 alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
D Dgeo_2601 Urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:dge00311]
D Dgeo_0269 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Dgeo_1291 beta-lactamase, putative K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Dgeo_0316 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:dge00332]
D Dgeo_0992 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Dgeo_0993 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:dge00261]
D Dgeo_2057 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D Dgeo_1410 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Dgeo_1127 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Dgeo_1782 Aspartate-semialdehyde dehydrogenase, USG-1 related protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:dge00521]
D Dgeo_0242 ROK domain protein K25026 glk; glucokinase [EC:2.7.1.2]
D Dgeo_1875 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Dgeo_0795 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Dgeo_0340 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dgeo_2643 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dgeo_0192 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dgeo_2008 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Dgeo_0242 ROK domain protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D Dgeo_0340 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dgeo_2643 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Dgeo_0192 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis [PATH:dge00401]
D Dgeo_1040 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Dgeo_1627 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dgeo_0118 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dgeo_2875 aminotransferase, class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Dgeo_0983 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Dgeo_0985 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Dgeo_0434 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Dgeo_1963 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_0435 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_0109 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_0260 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Dgeo_0436 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:dge00999]
D Dgeo_0287 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Dgeo_2862 broad-specificity cellobiase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:dge00362]
D Dgeo_2404 alpha/beta hydrolase fold protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D Dgeo_2388 4-carboxymuconolactone decarboxylase / 3-oxoadipate enol-lactonase K14727 pcaL; 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44]
D Dgeo_0618 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Dgeo_0454 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Dgeo_2386 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D Dgeo_2387 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D Dgeo_2385 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D Dgeo_0717 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Dgeo_2382 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D Dgeo_0754 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Dgeo_0617 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Dgeo_1221 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dgeo_2761 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Dgeo_1444 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Dgeo_1441 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0755 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1883 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:dge00627]
D Dgeo_1333 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Dgeo_0509 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Dgeo_0182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D Dgeo_2296 Alcohol dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D Dgeo_0454 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:dge00622]
D Dgeo_0454 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D Dgeo_0618 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:dge00643]
D Dgeo_1333 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Dgeo_0454 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D Dgeo_0428 acyl-CoA dehydrogenase-like protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
D Dgeo_2386 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D Dgeo_2387 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:dge03020]
D Dgeo_0636 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Dgeo_0635 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Dgeo_1840 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Dgeo_0252 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:dge03010]
D Dgeo_1577 RNA binding S1 K02945 RP-S1; small subunit ribosomal protein S1
D Dgeo_1049 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Dgeo_1861 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Dgeo_1841 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Dgeo_1850 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Dgeo_0166 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Dgeo_1872 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Dgeo_1853 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Dgeo_1735 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Dgeo_1868 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Dgeo_1842 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Dgeo_1873 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Dgeo_1843 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Dgeo_1854 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Dgeo_2190 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Dgeo_1483 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Dgeo_1858 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Dgeo_0164 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Dgeo_1863 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Dgeo_1432 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Dgeo_0641 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Dgeo_1864 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Dgeo_1867 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Dgeo_1866 ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Dgeo_1855 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Dgeo_1852 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Dgeo_0639 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Dgeo_0163 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Dgeo_0640 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Dgeo_0642 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Dgeo_1734 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Dgeo_1857 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Dgeo_1848 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Dgeo_1860 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Dgeo_1839 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Dgeo_1851 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Dgeo_1738 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Dgeo_0574 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Dgeo_2216 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Dgeo_1862 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Dgeo_1865 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Dgeo_1856 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Dgeo_0469 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Dgeo_2217 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Dgeo_0535 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Dgeo_2250 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Dgeo_1859 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Dgeo_1849 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Dgeo_0577 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Dgeo_0013 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Dgeo_0645 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Dgeo_1568 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Dgeo_0573 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Dgeo_1844 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Dgeo_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0067 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0063 23S_ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dgeo_R0008 23S_ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dgeo_R0043 23S_ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dgeo_R0066 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dgeo_R0065 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dgeo_R0062 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dgeo_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dgeo_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:dge00970]
D Dgeo_R0019 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dgeo_R0020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dgeo_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dgeo_R0057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dgeo_R0064 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dgeo_R0035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dgeo_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dgeo_R0014 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Dgeo_R0003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dgeo_R0037 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dgeo_R0032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Dgeo_R0012 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dgeo_R0034 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dgeo_R0011 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dgeo_R0017 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dgeo_R0022 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dgeo_R0010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dgeo_R0061 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dgeo_R0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dgeo_R0058 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dgeo_R0015 tRNA-His K14226 tRNA-His; tRNA His
D Dgeo_R0036 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Dgeo_R0016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dgeo_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dgeo_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dgeo_R0055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dgeo_R0052 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dgeo_R0001 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dgeo_R0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dgeo_R0049 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dgeo_R0046 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dgeo_R0028 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dgeo_R0004 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Dgeo_R0029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dgeo_R0005 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dgeo_R0059 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dgeo_R0050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dgeo_R0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dgeo_R0033 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dgeo_R0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dgeo_R0024 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dgeo_R0021 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dgeo_R0053 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dgeo_R0006 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Dgeo_R0023 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Dgeo_R0031 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dgeo_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dgeo_R0048 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dgeo_1023 glutamyl-tRNA synthetase, class Ic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dgeo_1539 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dgeo_0760 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Dgeo_1352 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Dgeo_0414 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Dgeo_0933 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Dgeo_2188 glutaminyl-tRNA synthetase containing GatB/Yqey domain K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Dgeo_2201 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dgeo_1201 Threonyl/alanyl tRNA synthetase, SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dgeo_1122 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dgeo_0796 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Dgeo_1136 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Dgeo_1716 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Dgeo_1507 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Dgeo_0934 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Dgeo_1714 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Dgeo_0724 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Dgeo_2291 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Dgeo_1951 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Dgeo_0567 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dgeo_1101 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Dgeo_0903 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Dgeo_1036 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dgeo_0570 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Dgeo_1121 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Dgeo_0223 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Dgeo_0224 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Dgeo_0006 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dgeo_0450 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Dgeo_1602 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:dge03060]
D Dgeo_1847 SecY protein K03076 secY; preprotein translocase subunit SecY
D Dgeo_0644 SecE subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE
D Dgeo_1345 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Dgeo_1239 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Dgeo_1565 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dgeo_1058 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dgeo_1440 signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Dgeo_R0056 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Dgeo_0730 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Dgeo_1396 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Dgeo_0605 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Dgeo_1964 Sec-independent protein translocase component TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Dgeo_1965 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D Dgeo_1649 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Dgeo_1076 Peptidase S26A, signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Dgeo_2580 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Dgeo_2249 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:dge04122]
D Dgeo_1952 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dgeo_0159 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dgeo_2206 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Dgeo_0792 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Dgeo_1762 Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Dgeo_0329 molybdopterin synthase subunit MoaD K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D Dgeo_0176 UBA/THIF-type NAD/FAD binding fold protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Dgeo_0338 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Dgeo_0596 molybdopterin binding domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Dgeo_1922 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:dge03018]
D Dgeo_0004 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dgeo_0401 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Dgeo_0460 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Dgeo_1103 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Dgeo_0162 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Dgeo_2150 beta-lactamase-like protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Dgeo_1637 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dgeo_2076 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Dgeo_2231 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dgeo_0438 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dgeo_0612 metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:dge03030]
D Dgeo_1818 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dgeo_0157 exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dgeo_0255 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dgeo_2135 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dgeo_2262 DNA polymerase III subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dgeo_0745 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dgeo_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dgeo_3063 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dgeo_2037 DnaB-like protein helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Dgeo_1910 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Dgeo_0165 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_2964 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_1969 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Dgeo_2924 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Dgeo_1623 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Dgeo_1666 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dgeo_0696 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:dge03410]
D Dgeo_0248 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Dgeo_0785 Endonuclease III, alpha helical glycosidase superfamily K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Dgeo_2290 HhH-GPD K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Dgeo_2059 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Dgeo_0019 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Dgeo_1660 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Dgeo_0442 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Dgeo_0107 endonuclease III, DNA-3-methyladenine glycosidase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Dgeo_1718 Uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D Dgeo_2568 Uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D Dgeo_1556 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Dgeo_0461 exodeoxyribonuclease III (xth) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dgeo_2484 exodeoxyribonuclease III (xth) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dgeo_1666 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dgeo_1599 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dgeo_0696 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:dge03420]
D Dgeo_0545 transcription factor CarD K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Dgeo_0694 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Dgeo_1890 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Dgeo_1124 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Dgeo_0868 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dgeo_2967 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dgeo_1666 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dgeo_0696 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:dge03430]
D Dgeo_1537 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Dgeo_0899 DNA mismatch repair protein, MutS family K07456 mutS2; DNA mismatch repair protein MutS2
D Dgeo_1538 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Dgeo_0868 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dgeo_2967 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dgeo_0148 Exodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Dgeo_0027 Exonuclease VII small subunit XseB K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Dgeo_1599 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dgeo_0165 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_2964 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_0255 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dgeo_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dgeo_3063 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dgeo_2135 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dgeo_0745 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dgeo_2262 DNA polymerase III subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dgeo_1818 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dgeo_0157 exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dgeo_0696 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:dge03440]
D Dgeo_1599 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dgeo_0165 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_2964 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_1620 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Dgeo_0855 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Dgeo_1513 recombination protein RecR K06187 recR; recombination protein RecR
D Dgeo_2138 recA protein K03553 recA; recombination protein RecA
D Dgeo_1666 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dgeo_0726 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Dgeo_0404 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Dgeo_0327 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Dgeo_1139 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Dgeo_0592 Transcriptional regulator, Schlafen-like ATPase amd DNA-binding HTH domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Dgeo_0826 Helicase RecD/TraA K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Dgeo_0255 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dgeo_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dgeo_3063 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dgeo_2135 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dgeo_0745 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dgeo_2262 DNA polymerase III subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dgeo_1818 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dgeo_0157 exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dgeo_0271 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:dge02010]
D Dgeo_1411 ABC transporter, substrate-binding protein, aliphatic sulfonate K15553 ssuA; sulfonate transport system substrate-binding protein
D Dgeo_0543 ABC transporter, substrate-binding protein, aliphatic sulfonate K15553 ssuA; sulfonate transport system substrate-binding protein
D Dgeo_1412 ABC transporter, permease, aliphatic sulfonate K15554 ssuC; sulfonate transport system permease protein
D Dgeo_1413 ABC transporter, ATPase, aliphatic sulfonate K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dgeo_2499 ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein
D Dgeo_2498 ABC-type molybdate transport system, permease component K02018 modB; molybdate transport system permease protein
D Dgeo_1736 ABC-type transport system, ATPase component/photorepair protein PhrA K05776 modF; molybdate transport system ATP-binding protein
D Dgeo_1933 ABC-type thiamine transport system, periplasmic component K02064 thiB; thiamine transport system substrate-binding protein
D Dgeo_1934 ABC-type thiamine transport system; two domain fusion K02063 thiP; thiamine transport system permease protein
D Dgeo_1938 ABC-type polyamine transport system, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D Dgeo_0174 ABC-type proline/glycine/betaine transport system, periplasmic component K05845 opuC; osmoprotectant transport system substrate-binding protein
D Dgeo_0171 ABC-type proline/glycine/betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein
D Dgeo_0173 ABC-type proline/glycine/betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein
D Dgeo_0172 ABC-type proline/glycine/betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Dgeo_1059 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Dgeo_1500 carbohydrate ABC transporter substrate-binding protein, CUT1 family K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Dgeo_1501 carbohydrate ABC transporter membrane protein 1, CUT1 family K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Dgeo_1502 carbohydrate ABC transporter membrane protein 2, CUT1 family K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Dgeo_2696 carbohydrate ABC transporter substrate-binding protein, CUT1 family K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Dgeo_2695 carbohydrate ABC transporter membrane protein 1, CUT1 family K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Dgeo_2694 carbohydrate ABC transporter membrane protein 2, CUT1 family K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Dgeo_2870 sorbitol-binding protein / mannitol-binding protein K10227 smoE; polyol transport system substrate-binding protein
D Dgeo_2869 sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein K10228 smoF; polyol transport system permease protein
D Dgeo_2868 mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein K10229 smoG; polyol transport system permease protein
D Dgeo_0591 maltose-binding protein / trehalose-binding protein / palatinose-binding protein / sucrose-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Dgeo_0590 sucrose ABC transporter membrane protein / palatinose ABC transporter membrane protein / maltose ABC transporter membrane protein / trehalose ABC transporter membrane protein K10237 thuF; trehalose/maltose transport system permease protein
D Dgeo_0589 trehalose ABC transporter membrane protein / maltose ABC transporter membrane protein / palatinose ABC transporter membrane protein / sucrose ABC transporter membrane protein K10238 thuG; trehalose/maltose transport system permease protein
D Dgeo_2859 carbohydrate ABC transporter substrate-binding protein, CUT1 family K10240 cebE; cellobiose transport system substrate-binding protein
D Dgeo_2860 carbohydrate ABC transporter membrane protein 1, CUT1 family K10241 cebF; cellobiose transport system permease protein
D Dgeo_2861 carbohydrate ABC transporter membrane protein 2, CUT1 family K10242 cebG; cellobiose transport system permease protein
D Dgeo_0687 carbohydrate ABC transporter substrate-binding protein, CUT1 family K17244 chiE; putative chitobiose transport system substrate-binding protein
D Dgeo_1168 carbohydrate ABC transporter membrane protein 1, CUT1 family K17245 chiF; putative chitobiose transport system permease protein
D Dgeo_1169 carbohydrate ABC transporter membrane protein 2, CUT1 family K17246 chiG; putative chitobiose transport system permease protein
D Dgeo_0695 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D Dgeo_0703 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D Dgeo_1690 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein
D Dgeo_1691 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D Dgeo_1374 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Dgeo_0905 glucose-binding protein / mannose-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Dgeo_0906 glucose ABC transporter membrane protein / mannose ABC transporter membrane protein K17316 gtsB; glucose/mannose transport system permease protein
D Dgeo_0907 glucose ABC transporter membrane protein / mannose ABC transporter membrane protein K17317 gtsC; glucose/mannose transport system permease protein
D Dgeo_2825 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10439 rbsB; ribose transport system substrate-binding protein
D Dgeo_2824 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein
D Dgeo_2701 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10543 xylF; D-xylose transport system substrate-binding protein
D Dgeo_2699 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10543 xylF; D-xylose transport system substrate-binding protein
D Dgeo_2702 ABC-type xylose transport system, permease component K10544 xylH; D-xylose transport system permease protein
D Dgeo_2703 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D Dgeo_2855 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10554 frcA; fructose transport system ATP-binding protein
D Dgeo_2461 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10559 rhaS; rhamnose transport system substrate-binding protein
D Dgeo_2459 monosaccharide ABC transporter membrane protein, CUT2 family K10560 rhaP; rhamnose transport system permease protein
D Dgeo_2460 monosaccharide ABC transporter membrane protein, CUT2 family K10561 rhaQ; rhamnose transport system permease protein
D Dgeo_2458 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D Dgeo_2662 carbohydrate ABC transporter substrate-binding protein, CUT1 family K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Dgeo_2663 carbohydrate ABC transporter membrane protein 1, CUT1 family K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Dgeo_2664 carbohydrate ABC transporter membrane protein 2, CUT1 family K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Dgeo_0649 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D Dgeo_0650 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein
D Dgeo_0651 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein
D Dgeo_0652 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Dgeo_1986 amino acid ABC transporter substrate-binding protein, PAAT family K02424 tcyA; L-cystine transport system substrate-binding protein
D Dgeo_1987 amino acid ABC transporter membrane protein, PAAT family K10009 tcyB; L-cystine transport system permease protein
D Dgeo_1205 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_2165 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_2030 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_0735 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_2411 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_0620 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_0806 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_1636 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_1206 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2166 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2031 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_0734 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2424 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_0802 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2425 amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0801 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_1207 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_2167 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_2032 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_0733 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_1208 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2168 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2028 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0732 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0800 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_1209 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2169 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2029 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0731 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0799 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2426 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2757 ABC-type Fe3+-siderophore transport system, periplasmic component K23181 fecB; ferric citrate transport system substrate-binding protein
D Dgeo_2758 ABC-type Fe3+-siderophore transport system, permease component, FecD K23182 fecD; ferric citrate transport system permease protein
D Dgeo_2756 ABC-type Fe3+-siderophore transport system, permease component, FecD K23183 fecC; ferric citrate transport system permease protein
D Dgeo_2759 ABC-type Fe3+-siderophore transport system, ATPase component K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D Dgeo_2754 ABC-type Fe3+-siderophore transport system, periplasmic component K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D Dgeo_2139 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Dgeo_1676 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D Dgeo_1675 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Dgeo_0813 Lipoprotein releasing system, permease, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Dgeo_0967 ABC-type transport system, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Dgeo_1245 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D Dgeo_1243 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Dgeo_1242 ABC-type transport system, ATPase component K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Dgeo_0049 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein
D Dgeo_1183 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D Dgeo_0048 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D Dgeo_0587 ABC-type transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Dgeo_1481 Cell division FtsX protein K09811 ftsX; cell division transport system permease protein
D Dgeo_1480 Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Dgeo_1385 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Dgeo_0647 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dgeo_0648 ABC-type transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dgeo_2706 ABC-type transport system for cytochrome bd biosynthesis, ATPase and permease component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D Dgeo_2707 ABC-type transport system for cytochrome bd biosynthesis, ATPase and permease component K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:dge02060]
D Dgeo_2622 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Dgeo_2621 Phosphotransferase system HPr-related protein K02784 ptsH; phosphocarrier protein HPr
D Dgeo_2620 PTS system D-glucose-specific IIB component, Glc family / PTS system D-glucose-specific IIC component, Glc family / PTS system D-glucose-specific IIA component, Glc family K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D Dgeo_2173 Phosphocarrier protein HPr / PTS system D-fructose-specific IIA component (F1P-forming), Frc family K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D Dgeo_2175 PTS system D-fructose-specific IIC component (F1P-forming), Frc family / PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Dgeo_2174 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:dge03070]
D Dgeo_2119 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_1523 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_1239 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Dgeo_0644 SecE subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE
D Dgeo_1345 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Dgeo_1847 SecY protein K03076 secY; preprotein translocase subunit SecY
D Dgeo_1565 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dgeo_1058 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dgeo_0730 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Dgeo_1440 signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Dgeo_1396 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Dgeo_0605 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Dgeo_1964 Sec-independent protein translocase component TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Dgeo_1965 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D Dgeo_2951 ATPase involved in conjugal plasmid transfer TRAG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:dge02020]
D Dgeo_0195 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Dgeo_2364 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dgeo_3000 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dgeo_0649 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D Dgeo_0103 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Dgeo_2149 two component transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Dgeo_2852 potassium-transporting ATPase, D subunit K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Dgeo_2850 potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D Dgeo_2849 Potassium-translocating P-type ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D Dgeo_2851 potassium-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D Dgeo_0831 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Dgeo_0832 integral membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D Dgeo_0833 Uncharacterized protein UPF0065 K07795 tctC; putative tricarboxylic transport membrane protein
D Dgeo_0409 cytochrome oxidase assembly protein, CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D Dgeo_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Dgeo_0359 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Dgeo_1253 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Dgeo_2154 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Dgeo_2155 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Dgeo_1675 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Dgeo_1676 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D Dgeo_1626 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Dgeo_1496 transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Dgeo_0184 putative signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D Dgeo_0183 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR
D Dgeo_2055 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Dgeo_1203 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_1204 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_1441 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0755 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1883 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0356 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Dgeo_2038 Fimbrial protein pilin K02650 pilA; type IV pilus assembly protein PilA
D Dgeo_0968 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_1015 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_0106 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_1275 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_2705 cytochrome bd quinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Dgeo_2704 cytochrome bd quinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Dgeo_2119 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_1523 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_1294 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Dgeo_2693 glycoside hydrolase, family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D Dgeo_0292 arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:dge02024]
D Dgeo_2248 S-ribosylhomocysteinase, LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D Dgeo_0983 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Dgeo_0985 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Dgeo_1821 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Dgeo_1205 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_2165 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_2030 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_0735 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_2411 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_0620 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_0806 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_1636 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_1206 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2166 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2031 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_0734 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2424 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_0802 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2425 amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0801 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_1207 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_2167 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_2032 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_0733 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_1208 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2168 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2028 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0732 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0800 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_1209 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2169 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2029 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0731 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0799 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2426 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0628 PKD domain protein, secreted K20276 bapA; large repetitive protein
D Dgeo_1070 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Dgeo_0968 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_1015 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_0106 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_1275 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_0300 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Dgeo_1189 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_0324 ABC-type oligopeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_1344 ABC-type oligopeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_0554 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_2122 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_2510 ABC-type peptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_2123 ABC-type dipeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dgeo_0325 ABC-type oligopeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dgeo_1343 ABC-type oligopeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dgeo_2511 ABC-type oligopeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dgeo_1190 ABC-type dipeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dgeo_1191 ABC-type dipeptide transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dgeo_2124 ABC-type dipeptide transport system, permease component, DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dgeo_0326 ABC-type dipeptide transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dgeo_1342 ABC-type oligopeptide transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dgeo_2512 ABC-type oligopeptide transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dgeo_1341 ABC ATPase, oligopeptide transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dgeo_1340 ABC-type oligopeptide transport system, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dgeo_1565 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dgeo_1681 peptidase S8, subtilisin-like protein K14645 K14645; serine protease [EC:3.4.21.-]
D Dgeo_0457 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Dgeo_1239 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Dgeo_0644 SecE subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE
D Dgeo_1345 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Dgeo_1847 SecY protein K03076 secY; preprotein translocase subunit SecY
D Dgeo_1058 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dgeo_0730 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Dgeo_1440 signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D Dgeo_2825 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:dge02040]
D Dgeo_1986 amino acid ABC transporter substrate-binding protein, PAAT family K02424 tcyA; L-cystine transport system substrate-binding protein
D Dgeo_0476 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Dgeo_1346 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Dgeo_0004 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:dge04980]
D Dgeo_0666 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Dgeo_1613 GTPase of G3E family, ArgK-like protein K07588 MMAA; GTPase [EC:3.6.5.-]
D Dgeo_1322 methylmalonyl-CoA mutase metallochaperone MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D Dgeo_1320 methylmalonyl-CoA mutase, beta subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Dgeo_1336 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:dge01501]
D Dgeo_1079 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Dgeo_2780 glycoside hydrolase, family 3-like protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Dgeo_1291 beta-lactamase, putative K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Dgeo_0316 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Dgeo_2119 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_1523 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_2464 PBP1 protein; transglycosylase, transpeptidase domain K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dgeo_0768 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:dge01502]
D Dgeo_2121 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dgeo_1380 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Dgeo_1723 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Dgeo_1461 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Dgeo_1630 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dge01503]
D Dgeo_0254 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dgeo_0665 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dgeo_1034 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dgeo_0103 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Dgeo_2119 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_1523 outer membrane efflux protein K12340 tolC; outer membrane protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:dge01000]
C 01001 Protein kinases [BR:dge01001]
D Dgeo_0361 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D Dgeo_1397 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Dgeo_0728 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Dgeo_0744 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Dgeo_0168 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Dgeo_2852 potassium-transporting ATPase, D subunit K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Dgeo_1269 response regulator receiver sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Dgeo_2317 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Dgeo_0184 putative signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D Dgeo_0355 signal transduction histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D Dgeo_0834 signal transduction histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:dge01009]
D Dgeo_1637 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dgeo_0229 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:dge01002]
D Dgeo_2580 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Dgeo_2249 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Dgeo_0374 peptidase A24A-like protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Dgeo_0441 Pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D Dgeo_0598 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Dgeo_1388 NLP/P60 protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D Dgeo_0063 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Dgeo_2626 Glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Dgeo_0010 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dgeo_2624 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Dgeo_0863 Peptidase C56, PfpI K05520 yhbO; deglycase [EC:3.5.1.124]
D Dgeo_1450 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D Dgeo_0948 Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D Dgeo_1084 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Dgeo_2314 peptidase M3A and M3B, thimet/oligopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Dgeo_1643 Peptidase M16C associated K06972 PITRM1; presequence protease [EC:3.4.24.-]
D Dgeo_1977 peptidase M16-like protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Dgeo_1112 dipeptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dgeo_0366 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D Dgeo_0276 peptidase M20 K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Dgeo_2610 Amidase, hydantoinase/carbamoylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Dgeo_2227 peptidase M23B K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D Dgeo_1284 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Dgeo_1914 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Dgeo_1087 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Dgeo_0240 peptidase M29, aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D Dgeo_1489 peptidase M29, aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D Dgeo_0071 peptidase M29, aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D Dgeo_0334 carboxypeptidase Taq. Metallo peptidase. MEROPS family M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D Dgeo_2182 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Dgeo_2075 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Dgeo_1832 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Dgeo_0298 peptidase M42 K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D Dgeo_1043 peptidase M50 and PDZ domain K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Dgeo_0706 peptidase M55, D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D Dgeo_0328 membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D Dgeo_0103 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Dgeo_0978 peptidase S8 and S53, subtilisin, kexin, sedolisin K20754 pstI; aqualysin 1 [EC:3.4.21.111]
D Dgeo_1681 peptidase S8, subtilisin-like protein K14645 K14645; serine protease [EC:3.4.21.-]
D Dgeo_0457 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Dgeo_2222 peptidase S8, subtilisin-like protein K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D Dgeo_0147 peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Dgeo_2151 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Dgeo_0427 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Dgeo_2153 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Dgeo_1366 LexA-like repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D Dgeo_1649 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Dgeo_1076 Peptidase S26A, signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Dgeo_0193 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Dgeo_0525 alpha/beta hydrolase fold protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D Dgeo_1216 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Dgeo_0277 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Dgeo_1479 carboxyl-terminal protease containing PDZ and IRBP domains K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Dgeo_0269 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Dgeo_0654 peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-]
D Dgeo_1141 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Dgeo_1278 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:dge01003]
D Dgeo_2160 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Dgeo_0559 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Dgeo_0515 glycosyl transferase, family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D Dgeo_1184 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D Dgeo_1988 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21]
D Dgeo_2464 PBP1 protein; transglycosylase, transpeptidase domain K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dgeo_1066 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Dgeo_2647 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Dgeo_2651 glycosyl transferase, family 2 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D Dgeo_0059 trehalose 6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:dge01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dge01011]
D Dgeo_1386 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Dgeo_1632 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Dgeo_1631 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Dgeo_0485 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Dgeo_0099 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Dgeo_2121 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Dgeo_1380 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Dgeo_2085 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Dgeo_1461 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Dgeo_1630 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Dgeo_1051 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Dgeo_2003 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Dgeo_2464 PBP1 protein; transglycosylase, transpeptidase domain K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Dgeo_0768 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dgeo_0147 peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Dgeo_1388 NLP/P60 protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D Dgeo_2227 peptidase M23B K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D Dgeo_0417 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Dgeo_1086 cell-wall associated protease, NlpD-like protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Dgeo_1767 SpoIID-like protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Dgeo_0254 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dgeo_0665 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dgeo_1034 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:dge01004]
D Dgeo_0434 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Dgeo_0433 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Dgeo_0437 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Dgeo_1963 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_0435 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_0109 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Dgeo_1182 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Dgeo_0260 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Dgeo_0121 fatty acid desaturase, type 2 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D Dgeo_1750 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_1759 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_2396 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Dgeo_1070 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Dgeo_2519 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Dgeo_1834 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Dgeo_1788 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dgeo_0177 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Dgeo_2308 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dgeo_0026 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Dgeo_2221 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:dge01008]
D Dgeo_1684 Chalcone and stilbene synthase-like protein K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D Dgeo_1612 Isoprenylcysteine carboxyl methyltransferase K16168 bpsB; methyltransferase
D Dgeo_2057 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:dge01006]
D Dgeo_1618 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Dgeo_0020 undecaprenyl diphosphate synthase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D Dgeo_0496 Dimethylallyltransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Dgeo_0523 Phytoene synthase, CrtB K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Dgeo_0860 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Dgeo_2322 4-hydroxybenzoate polyprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Dgeo_0408 Cytochrome c oxidase assembly factor, CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:dge01007]
D Dgeo_1023 glutamyl-tRNA synthetase, class Ic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dgeo_1539 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dgeo_2188 glutaminyl-tRNA synthetase containing GatB/Yqey domain K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Dgeo_0006 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dgeo_0450 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Dgeo_1602 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Dgeo_1714 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Dgeo_1036 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dgeo_0724 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Dgeo_1101 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Dgeo_1951 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Dgeo_0567 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dgeo_0903 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Dgeo_1122 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dgeo_1136 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Dgeo_0796 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Dgeo_1121 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Dgeo_1716 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Dgeo_0934 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Dgeo_0570 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Dgeo_1507 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Dgeo_2201 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dgeo_1201 Threonyl/alanyl tRNA synthetase, SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dgeo_0223 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Dgeo_0224 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Dgeo_1627 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Dgeo_2069 succinyldiaminopimelate aminotransferase apoenzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Dgeo_0118 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dgeo_2875 aminotransferase, class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Dgeo_0057 7-keto-8-aminopelargonate synthetase-like enzyme K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Dgeo_0781 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Dgeo_1416 N2-acetyl-L-lysine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D Dgeo_0989 4-aminobutyrate aminotransferase apoenzyme K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Dgeo_1942 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Dgeo_2743 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Dgeo_1114 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
C 00199 Cytochrome P450 [BR:dge00199]
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:dge03000]
D Dgeo_2711 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Dgeo_2858 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dgeo_0580 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dgeo_0752 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dgeo_2920 periplasmic binding protein/LacI transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dgeo_2697 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dgeo_2871 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Dgeo_2509 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D Dgeo_1430 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Dgeo_2785 regulatory protein MocR, putative K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Dgeo_0658 transcriptional regulator, TetR family K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D Dgeo_1307 transcriptional regulator, TetR family K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D Dgeo_0772 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dgeo_0987 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dgeo_0942 transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D Dgeo_1929 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Dgeo_1548 HspR, global negative regulator of heat shock gene expression K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D Dgeo_0519 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Dgeo_2141 ferric uptake regulator, Fur family K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D Dgeo_2617 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D Dgeo_2778 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Dgeo_0968 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_1015 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_0106 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_1275 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Dgeo_0780 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D Dgeo_0499 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D Dgeo_2774 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Dgeo_2549 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Dgeo_0100 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Dgeo_2584 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Dgeo_1314 transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D Dgeo_2268 iron (metal) dependent repressor protein, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Dgeo_2822 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D Dgeo_2140 bifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Dgeo_1985 transcriptional regulator, TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D Dgeo_0630 Redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D Dgeo_0091 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Dgeo_2556 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Dgeo_2555 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Dgeo_2676 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Dgeo_2333 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2476 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2494 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2980 ParB-like chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2993 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_0170 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D Dgeo_2316 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Dgeo_0504 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Dgeo_0426 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Dgeo_2033 Ribonucleotide reductase regulator NrdR-like protein K07738 nrdR; transcriptional repressor NrdR
D Dgeo_0765 protein of unknown function UPF0040 K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:dge03021]
D Dgeo_1840 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Dgeo_0636 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Dgeo_0635 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Dgeo_0252 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Dgeo_0476 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Dgeo_1346 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Dgeo_1519 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Dgeo_0606 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Dgeo_1234 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Dgeo_0698 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Dgeo_0643 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Dgeo_0668 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Dgeo_1813 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D Dgeo_0902 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D Dgeo_1103 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:dge03019]
D Dgeo_1892 double-stranded RNA binding protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Dgeo_2150 beta-lactamase-like protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Dgeo_0162 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Dgeo_0460 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Dgeo_1055 guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D Dgeo_0004 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dgeo_0401 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Dgeo_1103 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Dgeo_1637 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Dgeo_2076 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Dgeo_2231 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dgeo_0438 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Dgeo_0612 metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Dgeo_0386 S-adenosylmethionine:2-demethylmenaquinone methyltransferase, RraA K02553 rraA; regulator of ribonuclease activity A
D Dgeo_0723 Uncharacterised P-loop ATPase protein UPF0042 K06958 rapZ; RNase adapter protein RapZ
D Dgeo_0976 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:dge03011]
D Dgeo_1577 RNA binding S1 K02945 RP-S1; small subunit ribosomal protein S1
D Dgeo_1049 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Dgeo_1861 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Dgeo_1841 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Dgeo_1850 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Dgeo_0166 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Dgeo_1872 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Dgeo_1853 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Dgeo_1735 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Dgeo_1868 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Dgeo_1842 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Dgeo_1873 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Dgeo_1843 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Dgeo_1854 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Dgeo_2190 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Dgeo_1483 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Dgeo_1858 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Dgeo_0164 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Dgeo_1863 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Dgeo_1432 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Dgeo_0641 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Dgeo_1864 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Dgeo_1867 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Dgeo_1866 ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Dgeo_1855 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Dgeo_1852 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Dgeo_0163 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Dgeo_0640 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Dgeo_0642 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Dgeo_0639 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Dgeo_1734 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Dgeo_1857 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Dgeo_1848 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Dgeo_1860 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Dgeo_1839 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Dgeo_1851 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Dgeo_1738 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Dgeo_0574 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Dgeo_2216 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Dgeo_1862 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Dgeo_1865 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Dgeo_1856 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Dgeo_2217 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Dgeo_0535 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Dgeo_2250 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Dgeo_1859 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Dgeo_1849 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Dgeo_0577 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Dgeo_0013 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Dgeo_0645 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Dgeo_1568 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Dgeo_0573 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Dgeo_1844 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Dgeo_0469 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Dgeo_R0065 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dgeo_R0062 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dgeo_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dgeo_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dgeo_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0067 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0063 23S_ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dgeo_R0008 23S_ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dgeo_R0043 23S_ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dgeo_R0066 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:dge03009]
D Dgeo_1892 double-stranded RNA binding protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Dgeo_0361 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D Dgeo_1825 GTP-binding protein Era K03595 era; GTPase
D Dgeo_2218 GTP1/OBG family GTPase K03979 obgE; GTPase [EC:3.6.5.-]
D Dgeo_1234 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Dgeo_0698 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Dgeo_0643 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Dgeo_1143 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Dgeo_1498 rRNA methyltransferase, sun family protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Dgeo_1622 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D Dgeo_0285 SAM-dependent methyltransferase, rRNA adenine N-6-methyltransferase family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Dgeo_0838 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Dgeo_2335 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Dgeo_0766 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Dgeo_1638 Tetrapyrrole methylase family enzyme K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Dgeo_2022 RNA methyltransferase TrmH, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Dgeo_1641 23S rRNA (pseudouridine-1915-N(3)-) methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Dgeo_1462 SAM dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Dgeo_0619 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Dgeo_0969 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Dgeo_0633 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Dgeo_1777 (Uracil-5)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Dgeo_0763 Pseudouridine synthase, Rsu K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Dgeo_0604 Pseudouridine synthase, RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Dgeo_0896 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Dgeo_2226 Pseudouridine synthase, RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Dgeo_1485 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Dgeo_0375 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Dgeo_0839 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Dgeo_0425 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Dgeo_2103 Small GTP-binding protein domain K03977 engA; GTPase
D Dgeo_2006 GTP-binding protein HflX K03665 hflX; GTPase
D Dgeo_0758 Sua5/YciO/YrdC/YwlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Dgeo_1308 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Dgeo_1695 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Dgeo_1233 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Dgeo_1647 RNA-binding S4 K14761 rlbA; ribosome-associated protein
D Dgeo_0131 Iojap-related protein K09710 ybeB; ribosome-associated protein
D Dgeo_1273 Predicted metal-dependent hydrolase, UPF0054 K07042 ybeY; probable rRNA maturation factor
D Dgeo_1384 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Dgeo_1574 GTPase, probable translation factor K06942 ychF; ribosome-binding ATPase
D Dgeo_0339 Zn-finger-like protein, DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:dge03016]
D Dgeo_1607 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Dgeo_1055 guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D Dgeo_0551 tRNA nucleotidyltransferase, Cca K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Dgeo_1023 glutamyl-tRNA synthetase, class Ic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dgeo_1539 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dgeo_0570 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Dgeo_1101 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Dgeo_0567 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dgeo_0724 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Dgeo_2188 glutaminyl-tRNA synthetase containing GatB/Yqey domain K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Dgeo_1036 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dgeo_0903 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Dgeo_1122 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dgeo_2201 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dgeo_1201 Threonyl/alanyl tRNA synthetase, SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Dgeo_1136 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Dgeo_1716 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Dgeo_1507 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Dgeo_0934 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Dgeo_1714 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Dgeo_1951 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Dgeo_1121 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Dgeo_0223 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Dgeo_0224 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Dgeo_0006 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dgeo_0450 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Dgeo_1602 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Dgeo_1517 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Dgeo_1329 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Dgeo_2090 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Dgeo_0037 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Dgeo_0761 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Dgeo_0594 Pseudouridylate synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D Dgeo_1952 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dgeo_0758 Sua5/YciO/YrdC/YwlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Dgeo_0860 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Dgeo_0478 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Dgeo_2337 Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme, GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Dgeo_1567 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Dgeo_R0025 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Dgeo_2086 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Dgeo_0032 ribonuclease II, VacB-like protein K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D Dgeo_2137 2',5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Dgeo_0796 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Dgeo_1071 CMP/dCMP deaminase, zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Dgeo_1996 tRNA-U16,U17-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D Dgeo_0077 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Dgeo_1369 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Dgeo_1990 RNA methyltransferase TrmH, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D Dgeo_0484 tRNA uridine 5-carboxymethylaminomethyl modification enzyme K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Dgeo_1486 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Dgeo_2234 tRNA (guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D Dgeo_0009 SAM-dependent methyltransferase DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D Dgeo_0072 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Dgeo_1582 putative RNA methylase K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256]
D Dgeo_1083 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Dgeo_0792 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Dgeo_1896 tRNA s(2)C-32 sulfurtransferase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Dgeo_2127 glycine cleavage T protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ
D Dgeo_0946 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Dgeo_0373 hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Dgeo_1978 Domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Dgeo_0330 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Dgeo_0991 tRNA(Ile)-lysidine synthetase-like protein and cytosine deaminase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Dgeo_1525 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Dgeo_1057 metalloendopeptidase, putative, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Dgeo_0053 Small ATP-binding protein UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Dgeo_0460 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Dgeo_0401 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:dge03012]
D Dgeo_1236 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Dgeo_1509 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Dgeo_0929 ATPase component of ABC transporter containing duplicated ATPase domain K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Dgeo_1048 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Dgeo_0646 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dgeo_1869 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dgeo_1453 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Dgeo_1871 translation elongation factor G K02355 fusA; elongation factor G
D Dgeo_0609 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Dgeo_1046 ribosome recycling factor K02838 frr; ribosome recycling factor
D Dgeo_0068 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Dgeo_2056 Aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Dgeo_1845 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Dgeo_0468 translation elongation factor P K02356 efp; elongation factor P
D Dgeo_0169 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D Dgeo_1492 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:dge03110]
D Dgeo_1475 ATPase AAA-2 K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D Dgeo_1210 ATPase AAA-2 K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Dgeo_1215 ATP-dependent Clp protease ATP-binding subunit ClpA K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Dgeo_2152 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Dgeo_2076 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Dgeo_2231 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dgeo_0451 chaperone DnaJ-like protein K03686 dnaJ; molecular chaperone DnaJ
D Dgeo_2078 chaperone DnaJ-like protein K05516 cbpA; curved DNA-binding protein
D Dgeo_0553 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D Dgeo_2077 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Dgeo_0505 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Dgeo_0859 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Dgeo_2230 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Dgeo_0103 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Dgeo_2182 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Dgeo_2075 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Dgeo_1832 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Dgeo_0581 copper(I)-binding protein, DUF461 K09796 pccA; periplasmic copper chaperone A
D Dgeo_1681 peptidase S8, subtilisin-like protein K14645 K14645; serine protease [EC:3.4.21.-]
D Dgeo_0457 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Dgeo_2222 peptidase S8, subtilisin-like protein K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D Dgeo_0686 glycoside hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Dgeo_1945 peptidylprolyl isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Dgeo_0740 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Dgeo_1837 thioredoxin K03671 TXN; thioredoxin
D Dgeo_2518 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D Dgeo_1248 Redoxin K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:dge04131]
D Dgeo_1689 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Dgeo_0445 Flotillin family protein K07192 FLOT; flotillin
D Dgeo_1133 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Dgeo_2228 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Dgeo_0005 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome [BR:dge03051]
C 03032 DNA replication proteins [BR:dge03032]
D Dgeo_1969 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Dgeo_2924 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Dgeo_0175 histone-like protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Dgeo_2501 histone-like protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Dgeo_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Dgeo_2037 DnaB-like protein helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Dgeo_1910 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Dgeo_0165 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_2964 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_0255 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dgeo_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dgeo_3063 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dgeo_0745 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dgeo_2262 DNA polymerase III subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dgeo_1818 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dgeo_0157 exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dgeo_2135 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dgeo_1623 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Dgeo_1666 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dgeo_0696 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dgeo_1016 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Dgeo_0546 DNA topoisomerase (ATP-hydrolyzing) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Dgeo_2001 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Dgeo_2058 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:dge03036]
D Dgeo_1892 double-stranded RNA binding protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Dgeo_0445 Flotillin family protein K07192 FLOT; flotillin
D Dgeo_0175 histone-like protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Dgeo_2501 histone-like protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Dgeo_2078 chaperone DnaJ-like protein K05516 cbpA; curved DNA-binding protein
D Dgeo_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Dgeo_0281 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein
D Dgeo_0772 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dgeo_0987 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Dgeo_0822 SMC protein K03529 smc; chromosome segregation protein
D Dgeo_1603 hypothetical protein K05896 scpA; segregation and condensation protein A
D Dgeo_0759 putative transcriptional regulator K06024 scpB; segregation and condensation protein B
D Dgeo_1634 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Dgeo_1480 Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Dgeo_0768 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Dgeo_1654 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Dgeo_1633 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D Dgeo_0486 cell elongation-specific peptidoglycan biosynthesis regulator RodA K03588 ftsW; cell division protein FtsW
D Dgeo_1481 Cell division FtsX protein K09811 ftsX; cell division transport system permease protein
D Dgeo_1635 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Dgeo_2019 AFG1-like protein ATPase K06916 zapE; cell division protein ZapE
D Dgeo_0254 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dgeo_0665 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dgeo_1034 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Dgeo_0673 Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D Dgeo_0376 septum site-determining protein MinD, ATPase K03609 minD; septum site-determining protein MinD
D Dgeo_0377 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Dgeo_1427 DivIVA K04074 divIVA; cell division initiation protein
D Dgeo_2334 ATPase involved in plasmide/chromosome partitioning, ParA/Soj-like protein K03496 parA; chromosome partitioning protein
D Dgeo_2495 ATPase for plasmid/chromosome partitioning, ParA/Soj-like protein K03496 parA; chromosome partitioning protein
D Dgeo_2981 PHD family antitoxin and ParA family chromosome partitioning ATPase K03496 parA; chromosome partitioning protein
D Dgeo_3070 ParA-like chromosome partition protein K03496 parA; chromosome partitioning protein
D Dgeo_2333 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2476 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2494 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2980 ParB-like chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2993 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2337 Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme, GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Dgeo_2335 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Dgeo_0484 tRNA uridine 5-carboxymethylaminomethyl modification enzyme K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Dgeo_1117 phage integrase K03733 xerC; integrase/recombinase XerC
D Dgeo_2277 phage integrase K03733 xerC; integrase/recombinase XerC
D Dgeo_2776 phage integrase K03733 xerC; integrase/recombinase XerC
D Dgeo_3046 integrase family protein K03733 xerC; integrase/recombinase XerC
D Dgeo_1703 phage integrase K04763 xerD; integrase/recombinase XerD
D Dgeo_0431 phage integrase K04763 xerD; integrase/recombinase XerD
D Dgeo_1569 MinD family ATPase, Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:dge03400]
D Dgeo_2059 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Dgeo_1660 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Dgeo_0019 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Dgeo_0248 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Dgeo_0785 Endonuclease III, alpha helical glycosidase superfamily K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Dgeo_2290 HhH-GPD K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Dgeo_0608 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dgeo_1510 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dgeo_1697 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dgeo_1930 8-oxo-dGTPase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Dgeo_1718 Uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D Dgeo_2568 Uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D Dgeo_1556 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Dgeo_0107 endonuclease III, DNA-3-methyladenine glycosidase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Dgeo_0442 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Dgeo_0461 exodeoxyribonuclease III (xth) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dgeo_2484 exodeoxyribonuclease III (xth) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Dgeo_1599 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Dgeo_0696 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Dgeo_1666 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Dgeo_0694 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Dgeo_1890 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Dgeo_1124 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Dgeo_0868 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dgeo_2967 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Dgeo_0636 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Dgeo_0635 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Dgeo_1840 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Dgeo_0252 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Dgeo_0545 transcription factor CarD K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Dgeo_1537 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Dgeo_0899 DNA mismatch repair protein, MutS family K07456 mutS2; DNA mismatch repair protein MutS2
D Dgeo_1538 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Dgeo_0148 Exodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Dgeo_0027 Exonuclease VII small subunit XseB K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Dgeo_0255 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Dgeo_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dgeo_3063 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Dgeo_0745 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Dgeo_2262 DNA polymerase III subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Dgeo_1818 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dgeo_0157 exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Dgeo_2135 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Dgeo_0165 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_2964 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_0826 Helicase RecD/TraA K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Dgeo_2138 recA protein K03553 recA; recombination protein RecA
D Dgeo_0726 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Dgeo_0404 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Dgeo_0327 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Dgeo_0271 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Dgeo_0823 SbcC, ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50
D Dgeo_0824 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D Dgeo_1212 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Dgeo_1620 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Dgeo_1139 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Dgeo_0592 Transcriptional regulator, Schlafen-like ATPase amd DNA-binding HTH domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Dgeo_0855 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Dgeo_1513 recombination protein RecR K06187 recR; recombination protein RecR
D Dgeo_1194 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Dgeo_0234 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Dgeo_2636 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Dgeo_1016 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Dgeo_0546 DNA topoisomerase (ATP-hydrolyzing) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Dgeo_2001 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Dgeo_2058 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Dgeo_0175 histone-like protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Dgeo_2501 histone-like protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Dgeo_1366 LexA-like repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D Dgeo_1433 regulatory protein RecX K03565 recX; regulatory protein
D Dgeo_1609 DNA polymerase of the X family containing C terminal PHP hydrolase domain K02347 polX; DNA polymerase (family X)
D Dgeo_1774 Ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dgeo_0251 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Dgeo_1775 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Dgeo_1290 phosphoesterase, RecJ-like protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:dge03029]
D Dgeo_1236 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Dgeo_1509 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Dgeo_1048 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Dgeo_0646 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dgeo_1869 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dgeo_1453 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Dgeo_1871 translation elongation factor G K02355 fusA; elongation factor G
D Dgeo_1825 GTP-binding protein Era K03595 era; GTPase
D Dgeo_0006 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Dgeo_0567 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Dgeo_1122 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Dgeo_1716 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Dgeo_1036 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Dgeo_0760 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Dgeo_1352 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Dgeo_0414 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Dgeo_0933 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Dgeo_0165 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_2964 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Dgeo_1425 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Dgeo_2076 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Dgeo_2077 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Dgeo_2231 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dgeo_2230 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Dgeo_0451 chaperone DnaJ-like protein K03686 dnaJ; molecular chaperone DnaJ
D Dgeo_1952 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Dgeo_1569 MinD family ATPase, Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Dgeo_0408 Cytochrome c oxidase assembly factor, CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D Dgeo_0409 cytochrome oxidase assembly protein, CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D Dgeo_1565 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dgeo_0582 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Dgeo_0405 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:dge02000]
D Dgeo_1385 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Dgeo_0647 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dgeo_0648 ABC-type transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Dgeo_2706 ABC-type transport system for cytochrome bd biosynthesis, ATPase and permease component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D Dgeo_2707 ABC-type transport system for cytochrome bd biosynthesis, ATPase and permease component K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D Dgeo_2499 ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein
D Dgeo_2498 ABC-type molybdate transport system, permease component K02018 modB; molybdate transport system permease protein
D Dgeo_1736 ABC-type transport system, ATPase component/photorepair protein PhrA K05776 modF; molybdate transport system ATP-binding protein
D Dgeo_1411 ABC transporter, substrate-binding protein, aliphatic sulfonate K15553 ssuA; sulfonate transport system substrate-binding protein
D Dgeo_0543 ABC transporter, substrate-binding protein, aliphatic sulfonate K15553 ssuA; sulfonate transport system substrate-binding protein
D Dgeo_1412 ABC transporter, permease, aliphatic sulfonate K15554 ssuC; sulfonate transport system permease protein
D Dgeo_1413 ABC transporter, ATPase, aliphatic sulfonate K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Dgeo_1933 ABC-type thiamine transport system, periplasmic component K02064 thiB; thiamine transport system substrate-binding protein
D Dgeo_1934 ABC-type thiamine transport system; two domain fusion K02063 thiP; thiamine transport system permease protein
D Dgeo_1938 ABC-type polyamine transport system, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D Dgeo_0174 ABC-type proline/glycine/betaine transport system, periplasmic component K05845 opuC; osmoprotectant transport system substrate-binding protein
D Dgeo_0171 ABC-type proline/glycine/betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein
D Dgeo_0173 ABC-type proline/glycine/betaine transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein
D Dgeo_0172 ABC-type proline/glycine/betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Dgeo_0363 putative sulfonate/nitrate/taurine transport system substrate-binding protein K24985 ribY; putative riboflavin transport system substrate-binding protein
D Dgeo_0111 ABC transporter related protein K24986 ribX; putative riboflavin transport system permease protein
D Dgeo_1059 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Dgeo_1500 carbohydrate ABC transporter substrate-binding protein, CUT1 family K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Dgeo_1501 carbohydrate ABC transporter membrane protein 1, CUT1 family K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Dgeo_1502 carbohydrate ABC transporter membrane protein 2, CUT1 family K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Dgeo_2696 carbohydrate ABC transporter substrate-binding protein, CUT1 family K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Dgeo_2695 carbohydrate ABC transporter membrane protein 1, CUT1 family K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Dgeo_2694 carbohydrate ABC transporter membrane protein 2, CUT1 family K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Dgeo_0905 glucose-binding protein / mannose-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Dgeo_0906 glucose ABC transporter membrane protein / mannose ABC transporter membrane protein K17316 gtsB; glucose/mannose transport system permease protein
D Dgeo_0907 glucose ABC transporter membrane protein / mannose ABC transporter membrane protein K17317 gtsC; glucose/mannose transport system permease protein
D Dgeo_0591 maltose-binding protein / trehalose-binding protein / palatinose-binding protein / sucrose-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Dgeo_0590 sucrose ABC transporter membrane protein / palatinose ABC transporter membrane protein / maltose ABC transporter membrane protein / trehalose ABC transporter membrane protein K10237 thuF; trehalose/maltose transport system permease protein
D Dgeo_0589 trehalose ABC transporter membrane protein / maltose ABC transporter membrane protein / palatinose ABC transporter membrane protein / sucrose ABC transporter membrane protein K10238 thuG; trehalose/maltose transport system permease protein
D Dgeo_2859 carbohydrate ABC transporter substrate-binding protein, CUT1 family K10240 cebE; cellobiose transport system substrate-binding protein
D Dgeo_2860 carbohydrate ABC transporter membrane protein 1, CUT1 family K10241 cebF; cellobiose transport system permease protein
D Dgeo_2861 carbohydrate ABC transporter membrane protein 2, CUT1 family K10242 cebG; cellobiose transport system permease protein
D Dgeo_0687 carbohydrate ABC transporter substrate-binding protein, CUT1 family K17244 chiE; putative chitobiose transport system substrate-binding protein
D Dgeo_1168 carbohydrate ABC transporter membrane protein 1, CUT1 family K17245 chiF; putative chitobiose transport system permease protein
D Dgeo_1169 carbohydrate ABC transporter membrane protein 2, CUT1 family K17246 chiG; putative chitobiose transport system permease protein
D Dgeo_2701 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10543 xylF; D-xylose transport system substrate-binding protein
D Dgeo_2699 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10543 xylF; D-xylose transport system substrate-binding protein
D Dgeo_2702 ABC-type xylose transport system, permease component K10544 xylH; D-xylose transport system permease protein
D Dgeo_2703 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D Dgeo_2855 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10554 frcA; fructose transport system ATP-binding protein
D Dgeo_2461 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10559 rhaS; rhamnose transport system substrate-binding protein
D Dgeo_2459 monosaccharide ABC transporter membrane protein, CUT2 family K10560 rhaP; rhamnose transport system permease protein
D Dgeo_2460 monosaccharide ABC transporter membrane protein, CUT2 family K10561 rhaQ; rhamnose transport system permease protein
D Dgeo_2458 monosaccharide ABC transporter ATP-binding protein, CUT2 family K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D Dgeo_2825 monosaccharide ABC transporter substrate-binding protein, CUT2 family K10439 rbsB; ribose transport system substrate-binding protein
D Dgeo_2824 monosaccharide ABC transporter membrane protein, CUT2 family K10440 rbsC; ribose transport system permease protein
D Dgeo_2662 carbohydrate ABC transporter substrate-binding protein, CUT1 family K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Dgeo_2663 carbohydrate ABC transporter membrane protein 1, CUT1 family K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Dgeo_2664 carbohydrate ABC transporter membrane protein 2, CUT1 family K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Dgeo_2870 sorbitol-binding protein / mannitol-binding protein K10227 smoE; polyol transport system substrate-binding protein
D Dgeo_2869 sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein K10228 smoF; polyol transport system permease protein
D Dgeo_2868 mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein K10229 smoG; polyol transport system permease protein
D Dgeo_0695 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D Dgeo_0703 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D Dgeo_1690 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein
D Dgeo_1691 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D Dgeo_1374 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Dgeo_2539 ABC-type uncharacterized transport system, permease component K02069 STAR2; UDP-glucose/iron transport system permease protein
D Dgeo_2540 ABC-type uncharacterized transport system, ATPase component K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D Dgeo_2821 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Dgeo_0751 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Dgeo_2726 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Dgeo_2919 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Dgeo_3106 ABC transporter, substrate binding periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Dgeo_2918 ABC-type sugar transport system, permease component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Dgeo_2725 carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein
D Dgeo_3105 ABC transporter, permease component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Dgeo_0750 carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein
D Dgeo_2831 carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein
D Dgeo_2820 carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein
D Dgeo_2917 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Dgeo_3104 ABC transporter, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Dgeo_0749 carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Dgeo_2830 carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Dgeo_2818 carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Dgeo_2724 carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Dgeo_0649 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D Dgeo_0650 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein
D Dgeo_0651 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein
D Dgeo_0652 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Dgeo_1986 amino acid ABC transporter substrate-binding protein, PAAT family K02424 tcyA; L-cystine transport system substrate-binding protein
D Dgeo_1987 amino acid ABC transporter membrane protein, PAAT family K10009 tcyB; L-cystine transport system permease protein
D Dgeo_1205 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_2165 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_2030 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_0735 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_2411 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_0620 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_0806 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_1636 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Dgeo_1206 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2166 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2031 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_0734 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2424 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_0802 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Dgeo_2425 amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0801 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_1207 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_2167 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_2032 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_0733 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Dgeo_1208 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2168 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2028 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0732 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0800 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Dgeo_1209 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2169 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2029 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0731 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_0799 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_2426 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Dgeo_1060 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Dgeo_2189 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Dgeo_1959 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Dgeo_1061 amino acid ABC transporter membrane protein, PAAT family K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dgeo_1958 amino acid ABC transporter membrane protein, PAAT family K02029 ABC.PA.P; polar amino acid transport system permease protein
D Dgeo_1064 amino acid ABC transporter ATP-binding protein, PAAT family K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Dgeo_1189 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_0324 ABC-type oligopeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_1344 ABC-type oligopeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_0554 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_2122 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_2510 ABC-type peptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Dgeo_2123 ABC-type dipeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dgeo_0325 ABC-type oligopeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dgeo_1343 ABC-type oligopeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dgeo_2511 ABC-type oligopeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dgeo_1190 ABC-type dipeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Dgeo_1191 ABC-type dipeptide transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dgeo_2124 ABC-type dipeptide transport system, permease component, DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dgeo_0326 ABC-type dipeptide transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dgeo_1342 ABC-type oligopeptide transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dgeo_2512 ABC-type oligopeptide transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Dgeo_1341 ABC ATPase, oligopeptide transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Dgeo_1340 ABC-type oligopeptide transport system, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Dgeo_2757 ABC-type Fe3+-siderophore transport system, periplasmic component K23181 fecB; ferric citrate transport system substrate-binding protein
D Dgeo_2758 ABC-type Fe3+-siderophore transport system, permease component, FecD K23182 fecD; ferric citrate transport system permease protein
D Dgeo_2756 ABC-type Fe3+-siderophore transport system, permease component, FecD K23183 fecC; ferric citrate transport system permease protein
D Dgeo_2759 ABC-type Fe3+-siderophore transport system, ATPase component K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D Dgeo_2754 ABC-type Fe3+-siderophore transport system, periplasmic component K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D Dgeo_2195 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein
D Dgeo_0124 ABC-type hemin transport system, periplasmic component K25132 hmuT; heme transport system substrate-binding protein
D Dgeo_0125 ABC-type hemin transport system, permease component, HutC K25133 hmuU; heme transport system permease protein
D Dgeo_0126 ABC-type hemin transport system, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D Dgeo_0657 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Dgeo_1370 ABC-type Fe3+-siderophore transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Dgeo_2753 ABC-type Fe3+-siderophore transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Dgeo_2363 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein
D Dgeo_0025 ABC-type iron transport system, periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein
D Dgeo_0024 ABC-type Fe3+-siderophore transport system, permease component K25027 btuC; cobalamin transport system permease protein
D Dgeo_0023 ABC-type Fe3+-siderophores transport system, ATPase component K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Dgeo_0534 ABC-type Mn2+ transport system, periplasmic component K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein
D Dgeo_0532 ABC-type Mn2+ transport system, permease component K09819 ABC.MN.P; manganese/iron transport system permease protein
D Dgeo_0533 ABC-type Mn2+ transport system, ATPase component K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D Dgeo_2139 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Dgeo_0049 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein
D Dgeo_1183 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D Dgeo_0048 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D Dgeo_0587 ABC-type transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Dgeo_1676 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein
D Dgeo_1675 ABC-type Na+ transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Dgeo_0813 Lipoprotein releasing system, permease, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Dgeo_0967 ABC-type transport system, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Dgeo_1245 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D Dgeo_1243 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Dgeo_1242 ABC-type transport system, ATPase component K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Dgeo_1481 Cell division FtsX protein K09811 ftsX; cell division transport system permease protein
D Dgeo_1480 Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Dgeo_2550 ABC-type uncharacterized transport system permease component-like protein K25154 evrC; viologen exporter family transport system permease protein
D Dgeo_0185 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Dgeo_1805 ABC transporter, permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D Dgeo_1812 ABC-type transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Dgeo_0382 ABC-type transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Dgeo_0381 ABC-type transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Dgeo_0187 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Dgeo_1806 ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Dgeo_1811 ABC-type transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Dgeo_1376 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Dgeo_1377 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Dgeo_0474 Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Dgeo_2408 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Dgeo_2542 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Dgeo_1415 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Dgeo_1027 hypothetical protein K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D Dgeo_1932 Cyanate permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D Dgeo_2389 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Dgeo_0530 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D Dgeo_2330 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D Dgeo_2203 major facilitator superfamily MFS_1 K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D Dgeo_1610 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D Dgeo_1326 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Dgeo_2622 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Dgeo_2621 Phosphotransferase system HPr-related protein K02784 ptsH; phosphocarrier protein HPr
D Dgeo_2173 Phosphocarrier protein HPr / PTS system D-fructose-specific IIA component (F1P-forming), Frc family K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D Dgeo_2620 PTS system D-glucose-specific IIB component, Glc family / PTS system D-glucose-specific IIC component, Glc family / PTS system D-glucose-specific IIA component, Glc family K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D Dgeo_2175 PTS system D-fructose-specific IIC component (F1P-forming), Frc family / PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Dgeo_2523 Glycerol uptake facilitator GlpF, MIP/aquaporin family K02440 glpF; glycerol uptake facilitator
D Dgeo_2054 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Dgeo_0306 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D Dgeo_0305 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Dgeo_1833 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Dgeo_1754 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Dgeo_1753 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD
D Dgeo_2211 Mg2+ transporter protein, CorA-like protein K03284 corA; magnesium transporter
D Dgeo_0150 Mg2+ transporter protein, CorA-like protein K03284 corA; magnesium transporter
D Dgeo_0362 Mg2+ transporter protein, CorA-like protein K03284 corA; magnesium transporter
D Dgeo_0149 crcB protein K06199 crcB; fluoride exporter
D Dgeo_2546 crcB protein K06199 crcB; fluoride exporter
D Dgeo_0471 protein of unknown function DUF1211 K24915 TMEM175; TMEM175 potassium channel family protein
D Dgeo_0092 Hemolysin-like CBS domain-containing protein DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dgeo_1285 CBS domain-containing protein DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dgeo_2119 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_1523 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_1425 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Dgeo_0775 LrgA K06518 cidA; holin-like protein
D Dgeo_0215 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Dgeo_2170 SugE family protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D Dgeo_1957 SugE family protein K11742 mdtI; spermidine export protein MdtI
D Dgeo_1956 SugE family protein K11743 mdtJ; spermidine export protein MdtJ
D Dgeo_0568 protein of unknown function DUF6, transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein
D Dgeo_1606 protein of unknown function DUF6, transmembrane K15268 eamA; O-acetylserine/cysteine efflux transporter
D Dgeo_1301 protein of unknown function DUF6, transmembrane K03298 TC.DME; drug/metabolite transporter, DME family
D Dgeo_1197 protein of unknown function DUF6, transmembrane K11939 rhtA; inner membrane transporter RhtA
D Dgeo_2427 calcium/proton exchanger K07300 chaA; Ca2+:H+ antiporter
D Dgeo_1760 SSS sodium solute transporter superfamily K14393 actP; cation/acetate symporter
D Dgeo_2071 sodium:dicarboxylate symporter K11102 gltP; proton glutamate symport protein
D Dgeo_0356 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Dgeo_1563 sodium/proton antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family
D Dgeo_2713 sodium/proton antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family
D Dgeo_0222 potassium/proton antiporter, CPA1 family K11105 cvrA; potassium/hydrogen antiporter
D Dgeo_0253 sodium/proton antiporter, CPA1 family K03316 nhaP; Na+:H+ antiporter
D Dgeo_1157 potassium/proton antiporter regulatory subunit, CPA2 family K07228 khtT; K+:H+ antiporter subunit KhtT
D Dgeo_1158 potassium/proton antiporter membrane subunit, CPA2 family K26732 khtU; K+:H+ antiporter subunit KhtU
D Dgeo_1583 K+ transporter Trk K03498 trkH; trk/ktr system potassium uptake protein
D Dgeo_1584 K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D Dgeo_1891 uracil-xanthine permease K02824 uraA; uracil permease
D Dgeo_2599 uracil-xanthine permease K24206 uacT; uric acid transporter
D Dgeo_2607 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Dgeo_1259 benzoate transporter K05782 benE; benzoate membrane transport protein
D Dgeo_0659 Chloride channel protein, EriC K03281 clcA; chloride channel protein, CIC family
D Dgeo_0120 Chromate transporter K07240 chrA; chromate transporter
D Dgeo_0955 Chromate transporter K07240 chrA; chromate transporter
D Dgeo_0956 Chromate transporter K07240 chrA; chromate transporter
D Dgeo_2353 high-affinity nickel-transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D Dgeo_2773 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D Dgeo_0709 NRAMP family Mn2+/Fe2+ transporter K03322 mntH; manganese transport protein
D Dgeo_2769 arsenite efflux membrane protein ArsB (TC 3.A.4.1.1; TC 2.A.45.1.1) K03893 arsB; arsenical pump membrane protein
D Dgeo_2547 arsenite efflux membrane protein ArsB K03893 arsB; arsenical pump membrane protein
D Dgeo_1590 Arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D Dgeo_0044 Multisubunit Na+/H+ antiporter MnhE subunit-like protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Dgeo_2003 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Dgeo_1082 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Dgeo_1955 Branched-chain amino acid permease, AzlC-like protein K26605 azlC; branched chain amino acid efflux pump
D Dgeo_1954 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D Dgeo_0831 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Dgeo_0832 integral membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D Dgeo_0833 Uncharacterized protein UPF0065 K07795 tctC; putative tricarboxylic transport membrane protein
D Dgeo_0372 protein of unknown function DUF165 K09125 yhhQ; queuosine precursor transporter
D Dgeo_3006 CCC1 related, iron/manganese transporter component, DUF125 K22736 VIT; vacuolar iron transporter family protein
D Dgeo_1435 protein of unknown function DUF125, transmembrane K22737 mbfA; erythrin-vacuolar iron transport family protein
D Dgeo_2143 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D Dgeo_0486 cell elongation-specific peptidoglycan biosynthesis regulator RodA K03588 ftsW; cell division protein FtsW
D Dgeo_2443 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D Dgeo_1241 cytochrome c biogenesis protein, transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Dgeo_1251 Rieske (2Fe-2S) region K08355 aoxA; arsenite oxidase small subunit [EC:1.20.2.1 1.20.9.1]
D Dgeo_0895 FeoA K04758 feoA; ferrous iron transport protein A
D Dgeo_0894 ferrous iron transport protein B, GTPase K04759 feoB; ferrous iron transport protein B
D Dgeo_1247 cytochrome c assembly protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D Dgeo_0853 Mg2+ transport protein C, MgtC K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D Dgeo_2602 Transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Dgeo_1130 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:dge02044]
D Dgeo_2119 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_1523 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_0374 peptidase A24A-like protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Dgeo_2038 Fimbrial protein pilin K02650 pilA; type IV pilus assembly protein PilA
D Dgeo_0263 Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D Dgeo_0757 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Dgeo_1725 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Dgeo_1726 type IV pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D Dgeo_1727 type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D Dgeo_1729 type IV pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D Dgeo_0669 Pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D Dgeo_0256 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D Dgeo_0264 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D Dgeo_3010 Competence protein ComEA related helix-hairpin-helix domain K02237 comEA; competence protein ComEA
D Dgeo_1579 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D Dgeo_2092 metallo-beta-lactamase superfamily hydrolase K02238 comEC; competence protein ComEC
D Dgeo_2951 ATPase involved in conjugal plasmid transfer TRAG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Dgeo_2948 Type IV secretory pathway VirB4 component, ATPase TRAC K12063 traC; conjugal transfer ATP-binding protein TraC
D Dgeo_1058 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Dgeo_1239 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Dgeo_0644 SecE subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE
D Dgeo_1345 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Dgeo_1847 SecY protein K03076 secY; preprotein translocase subunit SecY
D Dgeo_1440 signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Dgeo_0730 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Dgeo_1565 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Dgeo_1396 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Dgeo_0605 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Dgeo_1964 Sec-independent protein translocase component TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Dgeo_1965 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:dge02042]
D Dgeo_0092 Hemolysin-like CBS domain-containing protein DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dgeo_1285 CBS domain-containing protein DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Dgeo_0549 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:dge02022]
D Dgeo_0195 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Dgeo_2149 two component transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Dgeo_2852 potassium-transporting ATPase, D subunit K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Dgeo_1269 response regulator receiver sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Dgeo_2317 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Dgeo_1105 response regulator receiver protein K02483 K02483; two-component system, OmpR family, response regulator
D Dgeo_2343 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Dgeo_1626 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Dgeo_1496 transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Dgeo_0184 putative signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D Dgeo_0183 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR
D Dgeo_0355 signal transduction histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D Dgeo_0834 signal transduction histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:dge02035]
D Dgeo_1986 amino acid ABC transporter substrate-binding protein, PAAT family K02424 tcyA; L-cystine transport system substrate-binding protein
D Dgeo_0669 Pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D Dgeo_0256 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D Dgeo_0264 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D Dgeo_2038 Fimbrial protein pilin K02650 pilA; type IV pilus assembly protein PilA
D Dgeo_0263 Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D Dgeo_0757 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Dgeo_0374 peptidase A24A-like protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Dgeo_1729 type IV pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D Dgeo_1727 type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D Dgeo_1726 type IV pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D Dgeo_1725 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:dge04812]
D Dgeo_1635 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Dgeo_1634 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Dgeo_0673 Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D Dgeo_0376 septum site-determining protein MinD, ATPase K03609 minD; septum site-determining protein MinD
D Dgeo_0377 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Dgeo_2334 ATPase involved in plasmide/chromosome partitioning, ParA/Soj-like protein K03496 parA; chromosome partitioning protein
D Dgeo_2495 ATPase for plasmid/chromosome partitioning, ParA/Soj-like protein K03496 parA; chromosome partitioning protein
D Dgeo_2981 PHD family antitoxin and ParA family chromosome partitioning ATPase K03496 parA; chromosome partitioning protein
D Dgeo_3070 ParA-like chromosome partition protein K03496 parA; chromosome partitioning protein
D Dgeo_2333 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2476 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2494 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2980 ParB-like chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Dgeo_2993 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:dge04147]
D Dgeo_0004 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Dgeo_1133 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Dgeo_1134 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Dgeo_0005 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Dgeo_1112 dipeptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Dgeo_0445 Flotillin family protein K07192 FLOT; flotillin
D Dgeo_2231 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Dgeo_2076 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Dgeo_1304 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Dgeo_0548 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Dgeo_0646 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dgeo_1869 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Dgeo_1329 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Dgeo_1070 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Dgeo_1441 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_0755 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1883 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Dgeo_1846 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Dgeo_1550 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Dgeo_0847 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Dgeo_2065 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Dgeo_2067 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Dgeo_2481 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Dgeo_0981 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Dgeo_2522 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Dgeo_1203 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_1204 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Dgeo_0882 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Dgeo_1536 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Dgeo_2364 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dgeo_3000 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dgeo_0710 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Dgeo_0513 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Dgeo_0353 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_2323 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Dgeo_0720 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Dgeo_0495 Glu/Leu/Phe/Val dehydrogenase, dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dgeo_0494 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Dgeo_1974 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Dgeo_1135 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Dgeo_2228 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:dge02048]
D Dgeo_0234 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Dgeo_2636 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Dgeo_0233 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Dgeo_2637 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Dgeo_2629 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Dgeo_0235 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Dgeo_0237 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D Dgeo_0236 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D Dgeo_0238 CRISPR-associated protein, Csd5d family K19119 cas5d; CRISPR-associated protein Cas5d
D Dgeo_2630 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D Dgeo_2631 CRISPR-associated protein K19046 casB; CRISPR system Cascade subunit CasB
D Dgeo_2632 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D Dgeo_2633 CRISPR-associated protein, Cas5e family K19125 casD; CRISPR system Cascade subunit CasD
D Dgeo_2634 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE
D Dgeo_0965 CRISPR-associated protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D Dgeo_0964 CRISPR-associated protein, Cmr2 family K19076 cmr2; CRISPR-associated protein Cmr2
D Dgeo_0963 CRISPR-associated protein, Cmr3 family K09127 cmr3; CRISPR-associated protein Cmr3
D Dgeo_0962 CRISPR-associated protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D Dgeo_0961 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D Dgeo_0960 CRISPR-associated protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6
D Dgeo_2012 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Dgeo_3110 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Dgeo_2016 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Dgeo_3109 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Dgeo_2017 Type I restriction-modification system DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Dgeo_3108 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Dgeo_2577 hypothetical protein K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D Dgeo_1937 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Dgeo_2905 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D Dgeo_2906 prevent-host-death family protein K19159 yefM; antitoxin YefM
D Dgeo_2733 Antitoxin (PIN domain) of toxin-antitoxin stability system K07062 fitB; toxin FitB [EC:3.1.-.-]
D Dgeo_1635 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Dgeo_1023 glutamyl-tRNA synthetase, class Ic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dgeo_1539 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Dgeo_1952 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:dge04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:dge04052]
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:dge04090]
C 01504 Antimicrobial resistance genes [BR:dge01504]
D Dgeo_1202 aminoglycoside 3-N-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D Dgeo_2256 aminoglycoside phosphotransferase K19300 aph3-II; aminoglycoside 3'-phosphotransferase II [EC:2.7.1.95]
D Dgeo_0530 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D Dgeo_2330 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D Dgeo_1291 beta-lactamase, putative K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Dgeo_0316 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Dgeo_2149 two component transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Dgeo_2119 outer membrane efflux protein K12340 tolC; outer membrane protein
D Dgeo_1523 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dge00537]
D Dgeo_2364 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dgeo_3000 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Dgeo_1112 dipeptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:dge03100]
D Dgeo_R0019 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dgeo_R0020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dgeo_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Dgeo_R0057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dgeo_R0064 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dgeo_R0035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dgeo_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Dgeo_R0014 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Dgeo_R0003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dgeo_R0037 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Dgeo_R0032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Dgeo_R0012 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dgeo_R0034 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Dgeo_R0011 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dgeo_R0017 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Dgeo_R0022 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dgeo_R0010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dgeo_R0061 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dgeo_R0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dgeo_R0058 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Dgeo_R0015 tRNA-His K14226 tRNA-His; tRNA His
D Dgeo_R0036 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Dgeo_R0016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dgeo_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dgeo_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dgeo_R0055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dgeo_R0052 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Dgeo_R0001 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dgeo_R0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Dgeo_R0049 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dgeo_R0046 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dgeo_R0028 tRNA-Met K14230 tRNA-Met; tRNA Met
D Dgeo_R0004 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Dgeo_R0029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dgeo_R0005 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dgeo_R0059 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Dgeo_R0050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dgeo_R0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dgeo_R0033 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dgeo_R0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Dgeo_R0024 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dgeo_R0021 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dgeo_R0053 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Dgeo_R0006 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Dgeo_R0023 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Dgeo_R0031 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dgeo_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dgeo_R0048 tRNA-Val K14237 tRNA-Val; tRNA Val
D Dgeo_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0067 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Dgeo_R0063 23S_ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dgeo_R0008 23S_ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dgeo_R0043 23S_ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dgeo_R0066 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Dgeo_R0065 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dgeo_R0062 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dgeo_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dgeo_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Dgeo_R0056 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Dgeo_R0025 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Dgeo_R0051 prediction based on tmRNA website at Indiana University K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Dgeo_0160 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D Dgeo_2520 iron-containing alcohol dehydrogenase K11173 ADHFE1; hydroxyacid-oxoacid transhydrogenase [EC:1.1.99.24]
D Dgeo_1948 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Dgeo_1946 molybdopterin dehydrogenase, FAD-binding protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D Dgeo_1947 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Dgeo_0999 carboxynorspermidine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D Dgeo_0529 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Dgeo_2406 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Dgeo_0753 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Dgeo_2331 Thioredoxin reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D Dgeo_0843 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Dgeo_2072 SelR domain-containing protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Dgeo_0877 oxidoreductase component, molybdopterin binding protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D Dgeo_0990 Redoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Dgeo_2729 Redoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Dgeo_0446 OsmC-like protein protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Dgeo_0526 OsmC-like protein protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Dgeo_1014 NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Dgeo_1013 Thioredoxin reductase, TRXB K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Dgeo_1508 Glutaredoxin-like protein protein, YruB K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D Dgeo_2770 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Dgeo_2548 Arsenate reductase, ArsC-like protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Dgeo_0756 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Dgeo_2768 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Dgeo_0050 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Dgeo_0369 GCN5-related N-acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D Dgeo_1116 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Dgeo_0288 GCN5-related N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D Dgeo_1980 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D Dgeo_0708 Leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Dgeo_1793 transglutaminase-like protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D Dgeo_1099 glycosyl transferase, group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Dgeo_1966 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Dgeo_3004 ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Dgeo_1765 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16]
D Dgeo_1722 Dak phosphatase related protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Dgeo_0622 P-loop ATPase, DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Dgeo_0566 diguanylate cyclase K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D Dgeo_0135 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Dgeo_2074 Carboxylesterase, type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D Dgeo_2156 thioesterase-like protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D Dgeo_1696 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Dgeo_1882 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Dgeo_1535 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Dgeo_0244 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Dgeo_0262 HAD-superfamily phosphatase subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D Dgeo_0151 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Dgeo_2722 glycoside hydrolase, family 43 K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D Dgeo_2684 glycoside hydrolase, family 8 K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156]
D Dgeo_2292 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Dgeo_1021 LmbE-like protein protein K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D Dgeo_1185 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Dgeo_0046 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Dgeo_0951 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Dgeo_0562 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Dgeo_2787 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Dgeo_2305 LmbE-like protein protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D Dgeo_0230 YjgF-like protein protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Dgeo_1792 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Dgeo_1838 alpha/beta superfamily hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D Dgeo_1819 UV-endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D Dgeo_1145 YjeF-related protein, sugar kinase of the RbsK family K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Dgeo_2457 protein of unknown function DUF718 K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D Dgeo_2575 Heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Dgeo_2752 Heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D Dgeo_2581 Heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D Dgeo_0714 putative signal transduction protein with CBS domains K04767 acuB; acetoin utilization protein AcuB
D Dgeo_2452 cysteine-rich region DUF224, predicted oxidase subunit K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Dgeo_2451 Iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D Dgeo_2450 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
D Dgeo_1276 hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D Dgeo_2744 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D Dgeo_0207 SUF system FeS assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D Dgeo_0318 menaquinol-cytochrome c reductase iron-sulfur subunit precursor K15878 K15878; rieske iron-sulfur protein
D Dgeo_0319 menaquinol-cytochrome c reductase cytochrome b subunit precursor K15879 narC; cytochrome b-561
D Dgeo_0719 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D Dgeo_1292 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D Dgeo_1080 DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
D Dgeo_1100 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D Dgeo_1773 ribonucleotide reduction protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D Dgeo_1426 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Dgeo_1598 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D Dgeo_2354 cobalamin synthesis protein, GTPase of G3E family K02234 cobW; cobalamin biosynthesis protein CobW
C 99988 Secondary metabolism
C 99999 Others
D Dgeo_0941 Lactoylglutathione lyase and esterase family domains K15975 K15975; glyoxalase family protein
D Dgeo_2087 DoxX K15977 K15977; putative oxidoreductase
D Dgeo_1464 Thioredoxin family protein, general stress protein ytxJ-like protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Dgeo_1006 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Dgeo_0638 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
C 99974 Translation
D Dgeo_0674 RNA binding S1 K07571 K07571; S1 RNA binding domain protein
D Dgeo_0156 beta-lactamase-like protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D Dgeo_1474 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Dgeo_0432 FKBP-type peptidyl-prolyl cis-trans isomerase K03545 tig; trigger factor
D Dgeo_0878 Ferric reductase-like protein transmembrane component-like protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D Dgeo_0819 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Dgeo_1394 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D Dgeo_1268 OsmC-like protein protein K07397 yhfA; putative redox protein
D Dgeo_2605 Xanthine dehydrogenase accessory factor XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D Dgeo_0385 Predicted oxidoreductase DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D Dgeo_2101 O(6)-alkylguanine repair protein YbaZ K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D Dgeo_1894 Predicted endonuclease, UPF0102 K07460 yraN; putative endonuclease
D Dgeo_2345 DNA protecting protein DprA K04096 smf; DNA processing protein
D Dgeo_1401 AAA ATPase, central region K07478 ycaJ; putative ATPase
D Dgeo_0430 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_3100 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2987 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2936 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2795 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2700 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2595 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2587 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2578 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2533 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2446 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2377 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_1673 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_0805 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_0614 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2436 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2433 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2372 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2383 IS1 transposase K07480 insB; insertion element IS1 protein InsB
D Dgeo_2585 transposase IS3/IS911 K07483 K07483; transposase
D Dgeo_2991 transposase IS3/IS911 family protein K07483 K07483; transposase
D Dgeo_2803 transposase IS3/IS911 K07483 K07483; transposase
D Dgeo_0266 transposase IS66 K07484 K07484; transposase
D Dgeo_2819 transposase IS66 K07484 K07484; transposase
D Dgeo_2379 transposase IS66 K07484 K07484; transposase
D Dgeo_1877 transposase IS66 K07484 K07484; transposase
D Dgeo_1414 transposase IS66 K07484 K07484; transposase
D Dgeo_1372 transposase IS66 K07484 K07484; transposase
D Dgeo_2596 transposase IS66 K07484 K07484; transposase
D Dgeo_2586 transposase IS66 K07484 K07484; transposase
D Dgeo_2273 transposase IS200-like protein K07491 rayT; REP-associated tyrosine transposase
D Dgeo_2272 putative transposase, IS891/IS1136/IS1341 K07496 K07496; putative transposase
D Dgeo_2738 putative transposase, IS891/IS1136/IS1341 K07496 K07496; putative transposase
D Dgeo_0680 transposase, IS605 OrfB K07496 K07496; putative transposase
D Dgeo_0928 transposase, IS605 OrfB K07496 K07496; putative transposase
D Dgeo_3043 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Dgeo_2741 transposase, IS605 OrfB K07496 K07496; putative transposase
D Dgeo_2714 transposase, IS605 OrfB K07496 K07496; putative transposase
D Dgeo_2445 Transposase K07497 K07497; putative transposase
D Dgeo_2762 Transposase K07498 K07498; putative transposase
D Dgeo_2913 transposase K07498 K07498; putative transposase
D Dgeo_2945 transposase K07498 K07498; putative transposase
D Dgeo_2997 transposase K07498 K07498; putative transposase
D Dgeo_3012 transposase K07498 K07498; putative transposase
D Dgeo_3017 transposase K07498 K07498; putative transposase
D Dgeo_3074 transposase K07498 K07498; putative transposase
D Dgeo_3086 transposase K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D Dgeo_0996 phage shock protein A, PspA K03969 pspA; phage shock protein A
D Dgeo_0296 Type IV restriction endonuclease K07504 K07504; predicted type IV restriction endonuclease
D Dgeo_1512 hypothetical protein 103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Dgeo_1439 Cation/multidrug efflux pump K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Dgeo_1748 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D Dgeo_0069 single-stranded nucleic acid binding R3H K06346 jag; spoIIIJ-associated protein
D Dgeo_1368 Recombinase K06400 spoIVCA; site-specific DNA recombinase
D Dgeo_1283 SpoVS related protein K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
D Dgeo_1815 GTPase Rab/Ras family K24105 mglA; mutual gliding-motility protein MglA
C 99995 Signaling proteins
D Dgeo_0864 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Dgeo_1272 PhoH-like protein, ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D Dgeo_0715 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Dgeo_0716 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Dgeo_1246 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D Dgeo_1249 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D Dgeo_0128 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Dgeo_0653 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Dgeo_0246 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D Dgeo_1993 ApaG-like protein K06195 apaG; ApaG protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Dgeo_0390 DEAD/DEAH box helicase-like protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D Dgeo_0786 t-RNA-binding region (EMAP domain) K06878 K06878; tRNA-binding protein
D Dgeo_1573 globin K06886 glbN; hemoglobin
D Dgeo_0655 globin K06886 glbN; hemoglobin
D Dgeo_0779 globin K06886 glbN; hemoglobin
D Dgeo_2255 Conserved membrane protein containing MMPL domain K06994 K06994; putative drug exporter of the RND superfamily
D Dgeo_1077 alpha-beta hydrolase superfamily K07001 K07001; NTE family protein
D Dgeo_1288 HAD-superfamily hydrolase subfamily IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily
D Dgeo_1113 HAD-superfamily hydrolase subfamily IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily
D Dgeo_1667 HAD-superfamily hydrolase subfamily IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily
D Dgeo_0473 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Dgeo_0472 Iron-regulated ABC transporter permease protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D Dgeo_2157 ribonuclease BN K07058 K07058; membrane protein
D Dgeo_2207 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D Dgeo_0583 membrane protein K02351 K02351; putative membrane protein
D Dgeo_2482 dedA protein K03975 dedA; membrane-associated protein
D Dgeo_2467 hypothetical protein K01421 yhgE; putative membrane protein
D Dgeo_0671 membrane protein of unknown function K08972 K08972; putative membrane protein
D Dgeo_0410 protein of unknown function DUF420 K08976 K08976; putative membrane protein
D Dgeo_0108 hypothetical protein K09914 K09914; putative lipoprotein
C 99997 Function unknown
D Dgeo_1884 Ankyrin K06867 K06867; uncharacterized protein
D Dgeo_1263 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D Dgeo_1315 alpha/beta hydrolase fold protein K06889 K06889; uncharacterized protein
D Dgeo_0798 alpha/beta superfamily hydrolase K06889 K06889; uncharacterized protein
D Dgeo_1171 Hydrolase of the alpha/beta superfamily K06889 K06889; uncharacterized protein
D Dgeo_0538 protein of unknown function UPF0005 K06890 K06890; uncharacterized protein
D Dgeo_1943 CoA-binding protein K06929 K06929; uncharacterized protein
D Dgeo_0119 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Dgeo_1484 Predicted RNA-binding protein (contains KH domain) K06960 K06960; uncharacterized protein
D Dgeo_1282 peptidase, membrane zinc metallopeptidase, putative K06973 K06973; uncharacterized protein
D Dgeo_0681 NH2-acetyltransferase K06975 K06975; uncharacterized protein
D Dgeo_0972 Extracellular nuclease containing Fibronectin III domain K07004 K07004; uncharacterized protein
D Dgeo_2472 TatD-related deoxyribonuclease K07051 K07051; uncharacterized protein
D Dgeo_2115 protein of unknown function, zinc metallopeptidase putative K07054 K07054; uncharacterized protein
D Dgeo_2717 PIN domain, predicted nuclease, component of toxin-antitoxin system K07064 K07064; uncharacterized protein
D Dgeo_0675 fumarate reductase/succinate dehydrogenase flavoprotein-like protein K07077 K07077; uncharacterized protein
D Dgeo_1063 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Dgeo_0615 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Dgeo_2679 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Dgeo_0842 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Dgeo_1529 Calcineurin-like phosphoesterase K07095 K07095; uncharacterized protein
D Dgeo_0293 Predicted phosphoesterase K07096 K07096; uncharacterized protein
D Dgeo_0219 Calcineurin like phosphoesterase K07098 K07098; uncharacterized protein
D Dgeo_1434 metallophosphoesterase K07099 K07099; uncharacterized protein
D Dgeo_2677 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein
D Dgeo_2678 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein
D Dgeo_1224 NAD-dependent epimerase/dehydratase K07118 K07118; uncharacterized protein
D Dgeo_1018 Roadblock/LC7 K07131 K07131; uncharacterized protein
D Dgeo_2327 protein of unknown function DUF418 K07148 K07148; uncharacterized protein
D Dgeo_1312 protein of unknown function DUF554 K07150 K07150; uncharacterized protein
D Dgeo_1487 peptidase S16, lon-like protein K07157 K07157; uncharacterized protein
D Dgeo_0211 VWA containing CoxE-like protein K07161 K07161; uncharacterized protein
D Dgeo_0250 Zn-ribbon protein, possibly nucleic acid-binding protein K07164 K07164; uncharacterized protein
D Dgeo_1566 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Dgeo_1005 endonuclease V related, DUF99 K09120 K09120; uncharacterized protein
D Dgeo_2545 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D Dgeo_2544 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D Dgeo_1277 Predicted RNA-binding protein associated with RNAse G/E K09146 K09146; uncharacterized protein
D Dgeo_1594 HD supefamily hydrolase K09163 K09163; uncharacterized protein
D Dgeo_1648 protein of unknown function DUF1684 K09164 K09164; uncharacterized protein
D Dgeo_0213 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D Dgeo_1836 protein of unknown function DUF309 K09763 K09763; uncharacterized protein
D Dgeo_1075 protein of unknown function DUF503 K09764 K09764; uncharacterized protein
D Dgeo_0700 acid phosphatase/vanadium-dependent haloperoxidase related protein K09775 K09775; uncharacterized protein
D Dgeo_1418 NurA-like nuclease K09785 K09785; uncharacterized protein
D Dgeo_0387 protein of unknown function DUF454 K09790 K09790; uncharacterized protein
D Dgeo_1447 protein of unknown function DUF456 K09793 K09793; uncharacterized protein
D Dgeo_1661 hypothetical protein K09927 K09927; uncharacterized protein
D Dgeo_1970 hypothetical protein K09940 K09940; uncharacterized protein
D Dgeo_1037 hypothetical protein K09965 K09965; uncharacterized protein
D Dgeo_1747 Phosphate transport protein Pit K07220 K07220; uncharacterized protein
D Dgeo_1235 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 13, 2024