+D GENES KO #

  KEGG Orthology (KO) - Desulfitobacterium hafniense DCB-2

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:dhd00010] D Dhaf_3171 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Dhaf_3194 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Dhaf_2995 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dhaf_2529 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Dhaf_2633 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Dhaf_4837 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Dhaf_4839 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Dhaf_4717 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dhaf_2635 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dhaf_2781 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dhaf_2637 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dhaf_2756 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dhaf_4718 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Dhaf_4716 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dhaf_4715 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dhaf_2072 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dhaf_2755 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Dhaf_4251 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Dhaf_4240 pyruvate phosphate dikinase PEP/pyruvate-binding K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dhaf_4074 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Dhaf_4766 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Dhaf_0054 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Dhaf_4212 Alcohol dehydrogenase GroES domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Dhaf_0514 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_3921 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Dhaf_0467 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dhaf_2815 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Dhaf_1134 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:dhd00020] D Dhaf_0903 Citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Dhaf_1133 aconitate hydratase domain protein K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Dhaf_1523 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Dhaf_4074 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Dhaf_0192 CoA-binding domain protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Dhaf_2066 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Dhaf_3087 CoA-binding domain protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Dhaf_0191 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_2065 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_3089 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_0744 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Dhaf_0745 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Dhaf_0743 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Dhaf_4397 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Dhaf_4396 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Dhaf_1799 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dhaf_1134 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Dhaf_4766 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Dhaf_0054 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:dhd00030] D Dhaf_3194 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Dhaf_3842 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Dhaf_4744 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Dhaf_4745 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Dhaf_4838 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Dhaf_4828 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Dhaf_4274 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Dhaf_3449 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Dhaf_2815 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Dhaf_0092 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Dhaf_1980 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Dhaf_2056 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Dhaf_4839 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Dhaf_4837 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Dhaf_2995 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dhaf_2529 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Dhaf_2633 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:dhd00040] D Dhaf_3274 SAF domain protein K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7] D Dhaf_3275 Altronate dehydratase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7] D Dhaf_3605 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Dhaf_4514 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dhaf_3842 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Dhaf_3764 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:dhd00051] D Dhaf_3764 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Dhaf_2995 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dhaf_2529 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Dhaf_2633 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Dhaf_4837 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Dhaf_4839 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Dhaf_4717 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dhaf_2635 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dhaf_4828 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:dhd00052] D Dhaf_4455 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Dhaf_4514 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dhaf_2815 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Dhaf_3171 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Dhaf_4077 Beta-galactosidase/beta-glucuronidase-like protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Dhaf_2995 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dhaf_2529 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Dhaf_2633 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Dhaf_2625 ketose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] C 00053 Ascorbate and aldarate metabolism [PATH:dhd00053] D Dhaf_3605 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:dhd00500] D Dhaf_4514 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dhaf_4187 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Dhaf_3197 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Dhaf_3198 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Dhaf_3196 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Dhaf_3200 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Dhaf_3199 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Dhaf_3195 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Dhaf_2815 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Dhaf_3171 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Dhaf_3194 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dhd00520] D Dhaf_1089 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Dhaf_1549 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D Dhaf_0836 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dhaf_0835 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Dhaf_0091 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Dhaf_4788 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Dhaf_4060 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Dhaf_4061 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Dhaf_4822 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Dhaf_4504 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Dhaf_4503 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Dhaf_3171 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Dhaf_2815 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Dhaf_4514 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dhaf_3605 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Dhaf_4455 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Dhaf_3194 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Dhaf_4187 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Dhaf_3197 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Dhaf_3198 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:dhd00620] D Dhaf_0467 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dhaf_4766 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Dhaf_0054 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Dhaf_4074 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Dhaf_4892 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D Dhaf_0356 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D Dhaf_4906 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D Dhaf_1244 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Dhaf_0514 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_3921 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_4212 Alcohol dehydrogenase GroES domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Dhaf_3826 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Dhaf_4034 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Dhaf_0355 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Dhaf_2755 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Dhaf_2414 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Dhaf_3507 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Dhaf_2413 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Dhaf_3228 D-lactate dehydrogenase (cytochrome) K18930 dld; D-lactate dehydrogenase D Dhaf_1334 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Dhaf_4885 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Dhaf_3607 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Dhaf_2636 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1] D Dhaf_4417 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1] D Dhaf_1524 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1] D Dhaf_1980 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Dhaf_0902 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Dhaf_3085 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Dhaf_3508 acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Dhaf_1799 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dhaf_4397 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Dhaf_4396 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Dhaf_1134 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Dhaf_4251 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Dhaf_4240 pyruvate phosphate dikinase PEP/pyruvate-binding K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_1012 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Dhaf_1522 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] D Dhaf_1059 pyruvate carboxyltransferase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dhd00630] D Dhaf_0467 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dhaf_1799 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dhaf_0903 Citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Dhaf_1133 aconitate hydratase domain protein K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2692 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Dhaf_2691 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Dhaf_4401 methylaspartate mutase, E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D Dhaf_4403 methylaspartate mutase, S subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] D Dhaf_4400 Methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D Dhaf_4518 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Dhaf_4382 D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Dhaf_4383 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Dhaf_0707 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Dhaf_0708 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Dhaf_4384 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Dhaf_0706 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Dhaf_4517 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Dhaf_1646 Catalase K03781 katE; catalase [EC:1.11.1.6] D Dhaf_1029 Catalase K03781 katE; catalase [EC:1.11.1.6] D Dhaf_2820 Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D Dhaf_1980 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Dhaf_2079 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Dhaf_1082 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Dhaf_1327 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0994 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0922 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_4826 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dhaf_4037 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Dhaf_4036 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Dhaf_4039 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Dhaf_4074 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Dhaf_4038 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Dhaf_1174 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D Dhaf_1173 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D Dhaf_3291 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Dhaf_1796 isocitrate/isopropylmalate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D Dhaf_1978 dihydrodipicolinate synthetase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16] D Dhaf_4271 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Dhaf_4270 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dhaf_4394 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dhaf_4620 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dhaf_4269 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma C 00640 Propanoate metabolism [PATH:dhd00640] D Dhaf_0467 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dhaf_3826 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Dhaf_4034 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Dhaf_0355 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Dhaf_4074 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Dhaf_2695 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Dhaf_2863 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Dhaf_2414 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Dhaf_3507 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Dhaf_2413 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Dhaf_2692 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Dhaf_2691 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Dhaf_0191 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_2065 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_3089 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_0192 CoA-binding domain protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Dhaf_2066 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Dhaf_3087 CoA-binding domain protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:dhd00650] D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2693 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dhaf_2864 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dhaf_3651 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dhaf_4532 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Dhaf_2856 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D Dhaf_2695 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Dhaf_2863 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Dhaf_3544 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D Dhaf_3543 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D Dhaf_4892 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D Dhaf_0356 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D Dhaf_4906 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D Dhaf_1244 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Dhaf_2696 Glutaconate CoA-transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D Dhaf_2697 coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D Dhaf_1796 isocitrate/isopropylmalate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D Dhaf_0302 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D Dhaf_0744 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Dhaf_0745 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Dhaf_0743 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Dhaf_2634 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Dhaf_0603 acetyl-CoA hydrolase/transferase K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-] D Dhaf_4766 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Dhaf_0054 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Dhaf_3617 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_2482 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_1175 Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_3616 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dhaf_2483 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:dhd00660] D Dhaf_3617 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_2482 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_1175 Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_3616 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dhaf_2483 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dhaf_0191 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_2065 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_3089 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_0192 CoA-binding domain protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Dhaf_2066 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Dhaf_3087 CoA-binding domain protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Dhaf_4400 Methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D Dhaf_4401 methylaspartate mutase, E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D Dhaf_4403 methylaspartate mutase, S subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] D Dhaf_2485 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Dhaf_2486 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Dhaf_2487 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism D Dhaf_4717 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dhaf_2635 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:dhd00190] D Dhaf_3750 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Dhaf_3749 NADH dehydrogenase (ubiquinone) 30 kDa subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Dhaf_3748 NADH dehydrogenase (quinone) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Dhaf_1396 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Dhaf_1397 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Dhaf_3747 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Dhaf_3746 4Fe-4S ferredoxin iron-sulfur binding domain protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Dhaf_3744 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Dhaf_3743 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Dhaf_3742 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Dhaf_3741 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Dhaf_3751 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K05574 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 [EC:7.1.1.2] D Dhaf_0744 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Dhaf_0745 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Dhaf_0743 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Dhaf_1310 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Dhaf_1311 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Dhaf_4793 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Dhaf_4791 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Dhaf_4792 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Dhaf_4794 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Dhaf_4790 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Dhaf_4797 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dhaf_4795 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Dhaf_4796 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Dhaf_1515 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D Dhaf_2107 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes [PATH:dhd00720] D Dhaf_4766 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Dhaf_0054 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Dhaf_4240 pyruvate phosphate dikinase PEP/pyruvate-binding K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dhaf_4251 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Dhaf_1799 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dhaf_4397 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Dhaf_4396 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Dhaf_0744 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Dhaf_0745 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Dhaf_0743 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Dhaf_1873 protein of unknown function DUF224 cysteine-rich region domain protein K18210 tfrB; fumarate reductase (CoM/CoB) subunit B [EC:1.3.4.1] D Dhaf_0192 CoA-binding domain protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Dhaf_2066 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Dhaf_3087 CoA-binding domain protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Dhaf_0191 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_2065 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_3089 Succinate--CoA ligase (ADP-forming) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_1523 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Dhaf_1133 aconitate hydratase domain protein K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Dhaf_2414 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Dhaf_3507 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Dhaf_2413 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Dhaf_2691 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Dhaf_2692 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Dhaf_1398 formate dehydrogenase, alpha subunit K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10] D Dhaf_0555 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Dhaf_0149 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Dhaf_0557 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Dhaf_3496 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Dhaf_3495 Formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D Dhaf_0556 Formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D Dhaf_0077 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Dhaf_2792 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_1838 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_1896 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_2367 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_2568 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_3883 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_4612 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_4640 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_4871 Methionine synthase K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_0540 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_0722 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_1108 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Dhaf_4327 Tetrahydromethanopterin S-methyltransferase K25221 mtgA; [methyl-Co(III) glycine betaine-specific corrinoid protein]---tetrahydrofolate methyltransferase [EC:2.1.1.378] D Dhaf_3792 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_1166 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_0882 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_2798 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_0881 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_3155 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_3791 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_2063 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_2797 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169] D Dhaf_2796 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D Dhaf_2793 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245] D Dhaf_4034 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Dhaf_0355 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Dhaf_3826 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Dhaf_0467 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:dhd00680] D Dhaf_4212 Alcohol dehydrogenase GroES domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Dhaf_4271 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Dhaf_4270 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dhaf_4394 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dhaf_4620 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Dhaf_4269 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D Dhaf_3153 molybdopterin oxidoreductase K22516 fdhA; formate dehydrogenase (coenzyme F420) alpha subunit [EC:1.17.98.3 1.8.98.6] D Dhaf_1398 formate dehydrogenase, alpha subunit K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10] D Dhaf_2796 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D Dhaf_2793 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245] D Dhaf_3792 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_1166 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_0882 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_2798 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_0881 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_3155 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_3791 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_2063 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_4826 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dhaf_2079 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Dhaf_4715 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dhaf_2072 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dhaf_1799 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dhaf_4839 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Dhaf_4837 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Dhaf_2995 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dhaf_2529 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Dhaf_2633 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Dhaf_4363 ferredoxin-dependent glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D Dhaf_1322 ferredoxin-dependent glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D Dhaf_0346 formylmethanofuran dehydrogenase subunit E region K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12] D Dhaf_3826 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Dhaf_0467 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dhaf_4240 pyruvate phosphate dikinase PEP/pyruvate-binding K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Dhaf_4716 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dhaf_4578 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Dhaf_4579 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Dhaf_2989 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Dhaf_1728 trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D Dhaf_4870 trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D Dhaf_1730 trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D Dhaf_4325 methyltransferase cognate corrinoid protein K14084 mttC; trimethylamine corrinoid protein D Dhaf_0195 cobalamin B12-binding domain protein K14084 mttC; trimethylamine corrinoid protein D Dhaf_2567 cobalamin B12-binding domain protein K16179 mtbC; dimethylamine corrinoid protein C 00910 Nitrogen metabolism [PATH:dhd00910] D Dhaf_1289 molybdopterin oxidoreductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D Dhaf_3631 Nitrite reductase (cytochrome; ammonia-forming) K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D Dhaf_4234 Nitrite reductase (cytochrome; ammonia-forming) K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D Dhaf_4235 cytochrome c nitrate reductase, small subunit K15876 nrfH; cytochrome c nitrite reductase small subunit D Dhaf_3630 cytochrome c nitrite reductase, small subunit NrfH K15876 nrfH; cytochrome c nitrite reductase small subunit D Dhaf_2253 Nitric-oxide reductase K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D Dhaf_2254 hypothetical protein K02305 norC; nitric oxide reductase subunit C D Dhaf_0209 Nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4] D Dhaf_1050 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Dhaf_1355 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Dhaf_1354 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Dhaf_1051 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Dhaf_1353 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Dhaf_1815 Nitrogenase K02588 nifH; nitrogenase iron protein NifH D Dhaf_1049 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Dhaf_1538 Nitrogenase K02588 nifH; nitrogenase iron protein NifH D Dhaf_4539 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Dhaf_3815 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Dhaf_4852 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Dhaf_1327 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0994 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0922 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0946 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Dhaf_3501 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Dhaf_0947 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Dhaf_4566 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Dhaf_2660 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:dhd00920] D Dhaf_4118 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Dhaf_4117 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Dhaf_4116 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Dhaf_4115 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Dhaf_3641 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dhaf_1356 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dhaf_1920 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dhaf_3643 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Dhaf_1357 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Dhaf_3642 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dhaf_1358 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dhaf_1919 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dhaf_4111 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Dhaf_4112 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Dhaf_3674 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Dhaf_4113 Phosphoadenylyl-sulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Dhaf_2763 nitrite and sulphite reductase 4Fe-4S region K00385 asrC; anaerobic sulfite reductase subunit C D Dhaf_4107 nitrite and sulphite reductase 4Fe-4S region K00385 asrC; anaerobic sulfite reductase subunit C D Dhaf_0252 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D Dhaf_0253 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] D Dhaf_0256 Nitrate reductase gamma subunit K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10] D Dhaf_0257 4Fe-4S ferredoxin, iron-sulfur binding K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10] D Dhaf_0258 cytochrome c family protein K27189 dsrJ; [DsrC]-trisulfide reductase subunit J D Dhaf_0259 4Fe-4S ferredoxin iron-sulfur binding domain protein K27190 dsrO; [DsrC]-trisulfide reductase subunit O D Dhaf_0260 Polysulphide reductase NrfD K27191 dsrP; [DsrC]-trisulfide reductase subunit P D Dhaf_0854 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Dhaf_1362 DoxX family protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2] D Dhaf_0536 pyrogallol hydroxytransferase K08358 ttrB; tetrathionate reductase subunit B D Dhaf_1509 Formate dehydrogenase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D Dhaf_0397 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Dhaf_1149 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Dhaf_4581 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Dhaf_1383 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Dhaf_4227 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D Dhaf_4231 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D Dhaf_0479 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D Dhaf_1629 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D Dhaf_1630 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit D Dhaf_0480 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit D Dhaf_4226 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit D Dhaf_4230 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit D Dhaf_1631 Polysulphide reductase NrfD K00185 dmsC; dimethyl sulfoxide reductase membrane subunit D Dhaf_0481 Polysulphide reductase NrfD K00185 dmsC; dimethyl sulfoxide reductase membrane subunit D Dhaf_4225 Polysulphide reductase NrfD K00185 dmsC; dimethyl sulfoxide reductase membrane subunit B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:dhd00061] D Dhaf_2414 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Dhaf_3507 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Dhaf_2413 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Dhaf_3816 acyl carrier protein K02078 acpP; acyl carrier protein D Dhaf_3818 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Dhaf_3820 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Dhaf_3814 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Dhaf_3341 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dhaf_3817 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dhaf_0608 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dhaf_4758 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Dhaf_3819 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D Dhaf_3638 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dhaf_3455 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:dhd00071] D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_4531 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Dhaf_4532 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Dhaf_2695 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Dhaf_2863 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Dhaf_3638 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dhaf_3455 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dhaf_4212 Alcohol dehydrogenase GroES domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Dhaf_0514 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_3921 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:dhd00561] D Dhaf_3291 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Dhaf_4681 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Dhaf_3821 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Dhaf_2387 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dhaf_3380 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dhaf_3386 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Dhaf_4277 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Dhaf_4379 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Dhaf_3178 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Dhaf_3211 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] C 00564 Glycerophospholipid metabolism [PATH:dhd00564] D Dhaf_3379 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Dhaf_2387 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dhaf_3380 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dhaf_3386 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Dhaf_4277 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Dhaf_4859 Ethanolamine utilisation EutA K04019 eutA; ethanolamine utilization protein EutA D Dhaf_4861 Ethanolamine ammonia lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D Dhaf_4860 Ethanolamine ammonia-lyase K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D Dhaf_1589 Methyltransferase type 11 K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D Dhaf_3704 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Dhaf_3028 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Dhaf_3539 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Dhaf_3123 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Dhaf_3778 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Dhaf_2839 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Dhaf_1291 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Dhaf_2987 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism D Dhaf_4077 Beta-galactosidase/beta-glucuronidase-like protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:dhd00592] D Dhaf_4531 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids D Dhaf_4411 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:dhd00230] D Dhaf_3464 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Dhaf_3449 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Dhaf_2815 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Dhaf_0092 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Dhaf_1475 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Dhaf_1480 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Dhaf_1477 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Dhaf_1471 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Dhaf_1476 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Dhaf_1472 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Dhaf_0799 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Dhaf_1474 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Dhaf_1473 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Dhaf_4928 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Dhaf_1478 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Dhaf_3610 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Dhaf_2978 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Dhaf_3448 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Dhaf_4051 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Dhaf_1437 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Dhaf_3214 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Dhaf_0146 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Dhaf_4388 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Dhaf_1438 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Dhaf_3894 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Dhaf_0267 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dhaf_0351 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Dhaf_4219 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Dhaf_3609 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Dhaf_2105 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Dhaf_2106 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Dhaf_2357 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D Dhaf_4927 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Dhaf_1712 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Dhaf_3102 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Dhaf_0443 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Dhaf_4258 protein of unknown function DUF265 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D Dhaf_4111 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Dhaf_4112 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Dhaf_0300 Asp/Glu/hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3] D Dhaf_1177 allantoinase K01466 allB; allantoinase [EC:3.5.2.5] D Dhaf_1178 allantoinase K01466 allB; allantoinase [EC:3.5.2.5] D Dhaf_1179 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9] D Dhaf_1181 Cupin 2 conserved barrel domain protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] C 00240 Pyrimidine metabolism [PATH:dhd00240] D Dhaf_0352 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dhaf_4016 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dhaf_3202 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dhaf_3203 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Dhaf_4017 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Dhaf_4019 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Dhaf_4018 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Dhaf_1798 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Dhaf_4014 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Dhaf_4015 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Dhaf_4012 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Dhaf_4013 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Dhaf_3707 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Dhaf_0146 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Dhaf_4353 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Dhaf_4844 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Dhaf_3387 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Dhaf_3054 phosphoribulokinase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Dhaf_2978 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Dhaf_4825 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Dhaf_4020 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Dhaf_3102 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Dhaf_3447 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Dhaf_4276 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Dhaf_0351 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Dhaf_0267 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dhaf_4824 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Dhaf_3015 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Dhaf_3666 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Dhaf_0400 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Dhaf_2960 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:dhd00250] D Dhaf_2311 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Dhaf_0157 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Dhaf_3068 Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Dhaf_0993 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Dhaf_0264 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3] D Dhaf_2068 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Dhaf_4355 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D Dhaf_0795 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Dhaf_0796 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Dhaf_4927 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Dhaf_1473 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Dhaf_4928 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Dhaf_4019 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Dhaf_2634 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Dhaf_0946 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Dhaf_3501 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Dhaf_0947 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Dhaf_4566 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Dhaf_4852 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Dhaf_1327 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0994 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0922 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0352 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dhaf_4016 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dhaf_3202 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Dhaf_3203 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Dhaf_4017 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Dhaf_0836 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dhaf_1475 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:dhd00260] D Dhaf_3243 aspartate/glutamate/uridylate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dhaf_3659 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dhaf_3660 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dhaf_2479 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dhaf_1386 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dhaf_2478 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Dhaf_3053 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Dhaf_1081 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Dhaf_4826 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dhaf_2079 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Dhaf_1980 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Dhaf_3291 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Dhaf_4716 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Dhaf_4578 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Dhaf_4579 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Dhaf_2989 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Dhaf_4037 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Dhaf_4036 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Dhaf_4039 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Dhaf_4074 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Dhaf_4038 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Dhaf_3028 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Dhaf_4326 trimethylamine methyltransferase K25220 mtgB; glycine betaine---corrinoid protein Co-methyltransferase [EC:2.1.1.376] D Dhaf_3835 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Dhaf_3836 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Dhaf_1003 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Dhaf_1079 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Dhaf_2895 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D Dhaf_1262 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Dhaf_4374 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Dhaf_4373 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Dhaf_0861 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:dhd00270] D Dhaf_0397 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Dhaf_1149 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Dhaf_4223 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Dhaf_0839 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1729 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1732 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1733 dihydropteroate synthase DHPS K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_2639 dihydropteroate synthase DHPS K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_3891 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Dhaf_1235 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Dhaf_3365 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Dhaf_0182 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Dhaf_1075 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Dhaf_4051 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Dhaf_3763 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Dhaf_3766 purine or other phosphorylase family 1 K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D Dhaf_3765 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Dhaf_2521 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] D Dhaf_3048 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Dhaf_3243 aspartate/glutamate/uridylate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dhaf_3659 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dhaf_3660 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dhaf_2479 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dhaf_1386 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dhaf_4581 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Dhaf_1383 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Dhaf_1146 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Dhaf_2480 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dhaf_2311 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Dhaf_1262 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Dhaf_1799 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Dhaf_4419 SAF domain protein K16845 suyA; (2R)-sulfolactate sulfo-lyase subunit alpha [EC:4.4.1.24] D Dhaf_2050 SAF domain protein K16845 suyA; (2R)-sulfolactate sulfo-lyase subunit alpha [EC:4.4.1.24] D Dhaf_4418 Altronate dehydratase K16846 suyB; (2R)-sulfolactate sulfo-lyase subunit beta [EC:4.4.1.24] D Dhaf_2051 Altronate dehydratase K16846 suyB; (2R)-sulfolactate sulfo-lyase subunit beta [EC:4.4.1.24] D Dhaf_3835 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Dhaf_3836 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Dhaf_4578 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Dhaf_4579 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:dhd00280] D Dhaf_2480 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dhaf_4074 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Dhaf_2695 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Dhaf_2863 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Dhaf_4531 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Dhaf_2692 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Dhaf_2691 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Dhaf_1318 6-phosphogluconate dehydrogenase NAD-binding K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dhd00290] D Dhaf_1003 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Dhaf_1079 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Dhaf_2485 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Dhaf_2486 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Dhaf_2487 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Dhaf_3617 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_2482 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_1175 Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_3616 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dhaf_2483 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dhaf_2484 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Dhaf_2481 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Dhaf_1970 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Dhaf_2480 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dhaf_1012 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:dhd00300] D Dhaf_2479 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dhaf_1386 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Dhaf_3243 aspartate/glutamate/uridylate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dhaf_3659 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dhaf_3660 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dhaf_3658 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Dhaf_3663 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Dhaf_0772 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Dhaf_2770 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Dhaf_3907 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Dhaf_3098 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Dhaf_4564 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Dhaf_4876 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Dhaf_0187 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D Dhaf_3288 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D Dhaf_4068 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Dhaf_1662 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Dhaf_4067 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Dhaf_4857 Radical SAM domain protein K16180 pylB; methylornithine synthase [EC:5.4.99.58] D Dhaf_4856 protein of unknown function DUF201 K16181 pylC; 3-methylornithine--L-lysine ligase [EC:6.3.2.59] D Dhaf_4855 conserved hypothetical protein K16182 pylD; 3-methylornithyl-N6-L-lysine dehydrogenase [EC:1.4.1.-] C 00310 Lysine degradation [PATH:dhd00310] D Dhaf_4074 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_1262 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Dhaf_2634 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Dhaf_4429 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:dhd00220] D Dhaf_0794 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Dhaf_0795 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Dhaf_0796 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Dhaf_0755 arginase K01476 rocF; arginase [EC:3.5.3.1] D Dhaf_4880 conserved hypothetical protein K27542 argZ; arginine dihydrolase [EC:3.5.3.27] D Dhaf_1327 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0994 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0922 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_4852 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Dhaf_2311 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Dhaf_3092 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D Dhaf_0770 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Dhaf_2531 GCN5-related N-acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1] D Dhaf_0771 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Dhaf_0769 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Dhaf_0772 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:dhd00330] D Dhaf_2052 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D Dhaf_0181 Orn/Lys/Arg decarboxylase major region K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Dhaf_0178 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Dhaf_0182 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Dhaf_1075 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Dhaf_1235 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Dhaf_3365 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Dhaf_1556 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Dhaf_3981 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Dhaf_4880 conserved hypothetical protein K27542 argZ; arginine dihydrolase [EC:3.5.3.27] D Dhaf_0755 arginase K01476 rocF; arginase [EC:3.5.3.1] D Dhaf_2500 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Dhaf_2501 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Dhaf_2502 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Dhaf_2311 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Dhaf_4429 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Dhaf_1978 dihydrodipicolinate synthetase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16] C 00340 Histidine metabolism [PATH:dhd00340] D Dhaf_1491 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Dhaf_1489 Histidine--tRNA ligase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Dhaf_1498 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Dhaf_1496 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Dhaf_1495 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Dhaf_1497 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Dhaf_1494 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Dhaf_1493 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dhaf_2109 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Dhaf_4086 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Dhaf_1492 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:dhd00350] D Dhaf_2311 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Dhaf_1493 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dhaf_4212 Alcohol dehydrogenase GroES domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Dhaf_0514 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_3921 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_2073 HpcH/HpaI aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D Dhaf_2634 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Dhaf_1723 tyrosine phenol-lyase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2] C 00360 Phenylalanine metabolism [PATH:dhd00360] D Dhaf_4601 Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D Dhaf_2693 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dhaf_2864 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dhaf_3651 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dhaf_2311 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Dhaf_1493 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dhaf_1377 GCN5-related N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D Dhaf_4429 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Dhaf_2096 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D Dhaf_3981 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Dhaf_1244 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism [PATH:dhd00380] D Dhaf_4074 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_1324 Tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1] D Dhaf_2460 Tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Dhaf_3981 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Dhaf_1646 Catalase K03781 katE; catalase [EC:1.11.1.6] D Dhaf_1029 Catalase K03781 katE; catalase [EC:1.11.1.6] D Dhaf_2096 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dhd00400] D Dhaf_2517 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Dhaf_3394 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Dhaf_1152 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Dhaf_3533 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Dhaf_3520 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Dhaf_3534 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Dhaf_3392 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Dhaf_3535 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Dhaf_4375 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Dhaf_4376 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Dhaf_4372 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Dhaf_4371 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Dhaf_4370 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Dhaf_4374 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Dhaf_4373 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Dhaf_0861 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Dhaf_3395 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D Dhaf_3377 amino acid-binding ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D Dhaf_3393 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Dhaf_3051 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Dhaf_2311 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Dhaf_1493 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:dhd00410] D Dhaf_0156 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Dhaf_0155 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Dhaf_2960 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Dhaf_2695 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Dhaf_2863 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] C 00430 Taurine and hypotaurine metabolism [PATH:dhd00430] D Dhaf_3867 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Dhaf_2068 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Dhaf_0189 sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] D Dhaf_4634 sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] D Dhaf_4034 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Dhaf_0355 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Dhaf_3826 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Dhaf_0190 conserved hypothetical protein K15515 sauS; sulfoacetaldehyde dehydrogenase [EC:1.2.1.81] D Dhaf_0366 Formate C-acetyltransferase K25261 islA; isethionate sulfite-lyase [EC:4.4.1.38] D Dhaf_0367 glycyl-radical enzyme activating protein family K25262 islB; isethionate sulfite-lyase activating enzyme C 00440 Phosphonate and phosphinate metabolism [PATH:dhd00440] D Dhaf_2682 GCN5-related N-acetyltransferase K09994 phnO; (aminoalkyl)phosphonate N-acetyltransferase [EC:2.3.1.280] D Dhaf_1876 beta-lactamase domain protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:dhd00450] D Dhaf_1383 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Dhaf_4223 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Dhaf_0839 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1729 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1732 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1733 dihydropteroate synthase DHPS K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_2639 dihydropteroate synthase DHPS K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_2475 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Dhaf_0851 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Dhaf_0860 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Dhaf_0477 alkyl hydroperoxide reductase F subunit K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Dhaf_4111 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Dhaf_4112 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Dhaf_4589 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Dhaf_4267 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Dhaf_0067 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:dhd00460] D Dhaf_3867 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Dhaf_3068 Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Dhaf_4826 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:dhd00470] D Dhaf_1342 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Dhaf_4842 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Dhaf_4429 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Dhaf_2721 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dhaf_0165 D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D Dhaf_0167 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D Dhaf_1262 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Dhaf_4404 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Dhaf_4065 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Dhaf_2895 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D Dhaf_3907 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Dhaf_4876 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:dhd00480] D Dhaf_3867 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Dhaf_1523 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Dhaf_0182 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Dhaf_1075 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:dhd00511] D Dhaf_4077 Beta-galactosidase/beta-glucuronidase-like protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dhd00541] D Dhaf_4514 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Dhaf_4455 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Dhaf_3605 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Dhaf_4472 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Dhaf_4468 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Dhaf_0893 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Dhaf_4471 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Dhaf_4171 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Dhaf_4467 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Dhaf_4187 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Dhaf_0091 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Dhaf_4822 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Dhaf_4504 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Dhaf_4503 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] C 00550 Peptidoglycan biosynthesis [PATH:dhd00550] D Dhaf_4788 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Dhaf_4060 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Dhaf_4061 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Dhaf_0802 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Dhaf_4065 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Dhaf_4068 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Dhaf_2721 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dhaf_1662 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Dhaf_4067 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Dhaf_3705 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Dhaf_0873 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Dhaf_3600 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Dhaf_4066 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Dhaf_4063 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Dhaf_0235 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Dhaf_0378 penicillin-binding protein, 1A family K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D Dhaf_4348 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Dhaf_4069 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Dhaf_2771 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Dhaf_3845 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A D Dhaf_3443 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_2174 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_2745 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_3668 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_1647 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_2716 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_3547 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Dhaf_1345 domain of unknown function DUF1727 K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D Dhaf_1346 CobB/CobQ domain protein glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:dhd00552] D Dhaf_0873 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Dhaf_3600 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Dhaf_4762 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Dhaf_0165 D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D Dhaf_0167 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D Dhaf_0166 membrane bound O-acyl transferase MBOAT family protein K03739 dltB; membrane protein involved in D-alanine export D Dhaf_0168 DltD domain protein K03740 dltD; D-alanine transfer protein D Dhaf_4100 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Dhaf_3430 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Dhaf_4379 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Dhaf_3178 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Dhaf_3211 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:dhd00543] D Dhaf_1763 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D Dhaf_0397 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:dhd00730] D Dhaf_2518 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Dhaf_2522 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Dhaf_3581 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dhaf_3488 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Dhaf_2519 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Dhaf_2520 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Dhaf_4258 protein of unknown function DUF265 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D Dhaf_2897 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Dhaf_3843 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Dhaf_0924 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Dhaf_3841 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Dhaf_0443 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:dhd00740] D Dhaf_2810 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Dhaf_2808 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Dhaf_2811 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Dhaf_2809 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Dhaf_3672 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Dhaf_1363 nitroreductase K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39] D Dhaf_2519 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Dhaf_3464 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:dhd00750] D Dhaf_2653 Phosphomethylpyrimidine kinase type-1 K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D Dhaf_4579 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Dhaf_1967 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D Dhaf_3053 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Dhaf_1077 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Dhaf_1078 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] D Dhaf_0007 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:dhd00760] D Dhaf_0157 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Dhaf_0917 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Dhaf_0158 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Dhaf_0797 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Dhaf_3448 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Dhaf_2978 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Dhaf_4332 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Dhaf_0798 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Dhaf_3486 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Dhaf_0302 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D Dhaf_2634 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:dhd00770] D Dhaf_3617 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_2482 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_1175 Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Dhaf_3616 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dhaf_2483 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Dhaf_2484 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Dhaf_2481 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Dhaf_1970 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Dhaf_0379 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Dhaf_0294 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Dhaf_1855 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Dhaf_3165 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Dhaf_0155 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Dhaf_0160 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Dhaf_3892 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Dhaf_2411 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Dhaf_2472 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Dhaf_1340 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Dhaf_3968 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Dhaf_2480 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dhaf_2960 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Dhaf_0156 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:dhd00780] D Dhaf_3814 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Dhaf_3341 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dhaf_3817 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dhaf_0608 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dhaf_4758 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Dhaf_1545 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] D Dhaf_1926 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] D Dhaf_0159 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:dhd00785] D Dhaf_2894 lipoyltransferase and lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Dhaf_4074 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Dhaf_4037 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Dhaf_4036 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Dhaf_4039 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Dhaf_4038 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:dhd00790] D Dhaf_0553 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Dhaf_2980 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Dhaf_0924 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Dhaf_0152 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Dhaf_0153 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Dhaf_0151 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Dhaf_4360 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Dhaf_2810 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Dhaf_4443 para-aminobenzoate synthase, subunit I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D Dhaf_4442 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Dhaf_3217 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Dhaf_1765 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Dhaf_1400 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Dhaf_1930 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Dhaf_1401 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Dhaf_1403 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Dhaf_4098 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Dhaf_1541 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Dhaf_3139 metal dependent phosphohydrolase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D Dhaf_1399 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:dhd00670] D Dhaf_0555 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Dhaf_0149 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Dhaf_0557 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Dhaf_3496 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Dhaf_3495 Formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D Dhaf_0556 Formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D Dhaf_4826 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Dhaf_1477 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Dhaf_1478 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Dhaf_3852 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Dhaf_4039 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Dhaf_0839 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1729 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1732 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1733 dihydropteroate synthase DHPS K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_2639 dihydropteroate synthase DHPS K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_4327 Tetrahydromethanopterin S-methyltransferase K25221 mtgA; [methyl-Co(III) glycine betaine-specific corrinoid protein]---tetrahydrofolate methyltransferase [EC:2.1.1.378] D Dhaf_0400 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Dhaf_0077 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Dhaf_1395 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:dhd00860] D Dhaf_3355 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Dhaf_3348 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Dhaf_3351 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Dhaf_3354 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Dhaf_4642 Uroporphyrinogen-III decarboxylase-like protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Dhaf_0196 Uroporphyrinogen decarboxylase (URO-D) K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Dhaf_2640 Uroporphyrinogen-III decarboxylase-like protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Dhaf_3353 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D Dhaf_0701 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D Dhaf_3356 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Dhaf_3349 putative transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D Dhaf_3352 Radical SAM domain protein K22226 ahbC; Fe-coproporphyrin III synthase D Dhaf_3350 Radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D Dhaf_1297 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Dhaf_1300 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D Dhaf_1298 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Dhaf_1299 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Dhaf_1301 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D Dhaf_1295 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D Dhaf_1296 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D Dhaf_1303 Precorrin-8X methylmutase CbiC/CobH K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Dhaf_1306 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Dhaf_0262 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Dhaf_2689 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Dhaf_3008 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Dhaf_1307 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Dhaf_1304 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Dhaf_1305 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Dhaf_3286 Adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Dhaf_3287 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Dhaf_3285 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Dhaf_1308 GHMP kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177] D Dhaf_4863 cobalamin adenosyltransferase K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154] D Dhaf_0056 conserved hypothetical protein K03594 bfr; bacterioferritin [EC:1.16.3.1] D Dhaf_1645 cotJC protein K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dhd00130] D Dhaf_3067 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Dhaf_0469 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D Dhaf_0470 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D Dhaf_0471 alpha/beta hydrolase fold protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D Dhaf_0474 Mandelate racemase/muconate lactonizing protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D Dhaf_0473 O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D Dhaf_0472 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D Dhaf_4028 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:dhd00900] D Dhaf_3488 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Dhaf_3702 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Dhaf_0394 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Dhaf_0087 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Dhaf_0395 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Dhaf_3700 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Dhaf_3385 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3491 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Dhaf_3361 Polyprenyl synthetase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30] D Dhaf_3364 conserved hypothetical protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Dhaf_3705 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:dhd00903] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Dhaf_2129 Alpha/beta hydrolase fold-3 domain protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:dhd00907] D Dhaf_4531 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Dhaf_4744 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Dhaf_4745 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics D Dhaf_0885 Nucleotidyl transferase K21210 ncsC; NDP-mannose synthase C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:dhd00523] D Dhaf_4472 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Dhaf_4468 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Dhaf_0893 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Dhaf_4471 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Dhaf_4171 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Dhaf_4467 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:dhd01053] D Dhaf_0469 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D Dhaf_3962 Chorismate binding-like protein K04781 mbtI; salicylate synthetase [EC:5.4.4.2 4.2.99.21] D Dhaf_3965 amino acid adenylation domain protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69] D Dhaf_3967 AMP-dependent synthetase and ligase K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] D Dhaf_3966 amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase C 01055 Biosynthesis of vancomycin group antibiotics D Dhaf_4468 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Dhaf_0893 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D Dhaf_0284 Acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41] C 00332 Carbapenem biosynthesis [PATH:dhd00332] D Dhaf_2501 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Dhaf_2502 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:dhd00261] D Dhaf_4111 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Dhaf_4112 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Dhaf_3243 aspartate/glutamate/uridylate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dhaf_3659 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D Dhaf_3660 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Dhaf_3658 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Dhaf_3663 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:dhd00521] D Dhaf_3171 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Dhaf_2815 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Dhaf_4472 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Dhaf_4468 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Dhaf_0893 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Dhaf_4471 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Dhaf_4171 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Dhaf_4467 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Dhaf_3171 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:dhd00525] D Dhaf_4472 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Dhaf_4468 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Dhaf_0893 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:dhd00401] D Dhaf_3393 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Dhaf_2311 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Dhaf_1493 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Dhaf_4375 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Dhaf_4376 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Dhaf_3818 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Dhaf_3341 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dhaf_3817 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dhaf_0608 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Dhaf_3816 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D Dhaf_3891 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:dhd00362] D Dhaf_4531 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Dhaf_1245 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Dhaf_1244 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Dhaf_1332 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Dhaf_1640 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Dhaf_1100 2-hydroxyglutaryl-CoA dehydratase D-component K04113 bcrB; benzoyl-CoA reductase subunit B [EC:1.3.7.8] D Dhaf_4532 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Dhaf_2693 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dhaf_2864 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dhaf_3651 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D Dhaf_3981 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:dhd00625] D Dhaf_0514 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_3921 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_4212 Alcohol dehydrogenase GroES domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Dhaf_2181 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Dhaf_1354 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Dhaf_1051 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Dhaf_1353 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Dhaf_1815 Nitrogenase K02588 nifH; nitrogenase iron protein NifH D Dhaf_1049 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Dhaf_1538 Nitrogenase K02588 nifH; nitrogenase iron protein NifH D Dhaf_1050 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Dhaf_1355 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Dhaf_2476 HAD-superfamily hydrolase, subfamily IA, variant 1 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D Dhaf_2476 HAD-superfamily hydrolase, subfamily IA, variant 1 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation [PATH:dhd00622] D Dhaf_1332 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Dhaf_1640 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Dhaf_1245 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Dhaf_1244 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation [PATH:dhd00633] D Dhaf_0805 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Dhaf_3368 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Dhaf_3271 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dhaf_0806 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dhaf_3367 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dhaf_2743 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dhaf_3792 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_1166 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_0882 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_2798 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Dhaf_0881 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_3155 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_3791 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_2063 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Dhaf_0252 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D Dhaf_0253 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] C 00642 Ethylbenzene degradation D Dhaf_4531 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:dhd00643] D Dhaf_3981 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Dhaf_2696 Glutaconate CoA-transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D Dhaf_2697 coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation C 00930 Caprolactam degradation D Dhaf_2129 Alpha/beta hydrolase fold-3 domain protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:dhd00621] D Dhaf_1332 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Dhaf_1640 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Dhaf_1245 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Dhaf_1244 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00626 Naphthalene degradation [PATH:dhd00626] D Dhaf_0514 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_3921 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Dhaf_4212 Alcohol dehydrogenase GroES domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation [PATH:dhd00984] D Dhaf_2538 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D Dhaf_0777 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D Dhaf_0779 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D Dhaf_0773 Succinate dehydrogenase K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:dhd03020] D Dhaf_0414 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Dhaf_0415 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Dhaf_0450 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Dhaf_3893 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Dhaf_4845 DNA-directed RNA polymerase delta subunit, putative K03048 rpoE; DNA-directed RNA polymerase subunit delta C 03022 Basal transcription factors D Dhaf_2947 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:dhd03010] D Dhaf_3385 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Dhaf_3709 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Dhaf_0428 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Dhaf_0449 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Dhaf_0439 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Dhaf_4936 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Dhaf_0418 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Dhaf_0436 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Dhaf_0727 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Dhaf_0421 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Dhaf_0448 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Dhaf_0417 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Dhaf_0447 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Dhaf_0435 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Dhaf_3671 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Dhaf_3760 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Dhaf_0431 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Dhaf_4934 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Dhaf_0426 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Dhaf_4315 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Dhaf_4292 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Dhaf_0407 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Dhaf_0425 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Dhaf_0422 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Dhaf_0423 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Dhaf_0434 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Dhaf_0437 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Dhaf_0409 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Dhaf_4931 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Dhaf_0408 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Dhaf_0406 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Dhaf_0726 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Dhaf_0432 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Dhaf_0441 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Dhaf_0429 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Dhaf_0451 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Dhaf_0438 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Dhaf_3755 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Dhaf_0217 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Dhaf_4338 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Dhaf_0427 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Dhaf_0424 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Dhaf_0433 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Dhaf_0750 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Dhaf_4336 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Dhaf_3839 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Dhaf_0430 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Dhaf_0440 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Dhaf_4835 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Dhaf_3824 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Dhaf_0403 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Dhaf_4961 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Dhaf_0216 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Dhaf_0446 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Dhaf_0416 ribosomal protein L7AE family protein K07590 RP-L7A; large subunit ribosomal protein L7A D Dhaf_R0006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0061 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0073 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0080 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0079 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0064 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0071 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0021 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0078 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0065 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0070 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:dhd00970] D Dhaf_R0019 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0072 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0063 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0088 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0002 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0053 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0069 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0042 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Dhaf_R0057 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Dhaf_R0084 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Dhaf_R0012 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Dhaf_R0047 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Dhaf_R0032 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Dhaf_R0015 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Dhaf_R0035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dhaf_R0050 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dhaf_R0030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dhaf_R0045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dhaf_R0092 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dhaf_R0082 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dhaf_R0044 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0074 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0014 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0060 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0087 tRNA-His K14226 tRNA-His; tRNA His D Dhaf_R0007 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Dhaf_R0062 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Dhaf_R0086 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0076 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0036 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dhaf_R0093 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dhaf_R0051 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dhaf_R0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dhaf_R0023 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0034 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0049 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0083 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0043 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0058 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0091 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Dhaf_R0013 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Dhaf_R0089 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dhaf_R0077 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dhaf_R0066 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dhaf_R0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dhaf_R0041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dhaf_R0056 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dhaf_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dhaf_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dhaf_R0039 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dhaf_R0054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dhaf_R0025 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dhaf_R0024 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dhaf_R0067 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Dhaf_R0022 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Dhaf_R0033 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Dhaf_R0048 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Dhaf_R0011 tRNA-Val K14237 tRNA-Val; tRNA Val D Dhaf_R0031 tRNA-Val K14237 tRNA-Val; tRNA Val D Dhaf_R0046 tRNA-Val K14237 tRNA-Val; tRNA Val D Dhaf_R0017 tRNA-Val K14237 tRNA-Val; tRNA Val D Dhaf_R0085 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Dhaf_0396 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Dhaf_1519 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Dhaf_1520 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Dhaf_4622 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Dhaf_1518 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Dhaf_4624 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Dhaf_4882 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Dhaf_3565 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Dhaf_3586 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dhaf_4851 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Dhaf_4255 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Dhaf_4254 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Dhaf_0185 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Dhaf_0008 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Dhaf_4267 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Dhaf_0398 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Dhaf_0067 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Dhaf_3852 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Dhaf_4361 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Dhaf_4328 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dhaf_4041 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Dhaf_0163 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Dhaf_4846 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dhaf_3699 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Dhaf_3587 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dhaf_0219 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Dhaf_0220 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Dhaf_0237 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dhaf_1546 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dhaf_3426 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Dhaf_2136 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:dhd03060] D Dhaf_0442 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Dhaf_0404 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Dhaf_4714 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Dhaf_3618 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Dhaf_3621 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Dhaf_4959 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Dhaf_4747 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dhaf_3761 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Dhaf_R0005 ffs; SRP RNA; RNA component of signal recognitionparti cle K01983 ffs; SRP RNA D Dhaf_3767 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Dhaf_1189 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Dhaf_2560 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dhaf_3345 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dhaf_0231 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dhaf_3363 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Dhaf_3754 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dhaf_3289 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dhaf_2722 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dhaf_1675 peptidase S24 and S26 domain protein K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dhaf_4023 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Dhaf_0847 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:dhd04122] D Dhaf_3581 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dhaf_3579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Dhaf_1400 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Dhaf_1930 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Dhaf_4109 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Dhaf_1508 Rhodanese domain protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D Dhaf_1401 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Dhaf_1403 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Dhaf_4110 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Dhaf_4108 Mov34/MPN/PAD-1 family protein K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6] C 03050 Proteasome C 03018 RNA degradation [PATH:dhd03018] D Dhaf_4715 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dhaf_2072 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dhaf_3670 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Dhaf_1595 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Dhaf_3118 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Dhaf_2927 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Dhaf_2928 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Dhaf_0673 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Dhaf_3104 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Dhaf_3657 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Dhaf_3518 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Dhaf_2995 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dhaf_4299 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Dhaf_1406 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0735 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0740 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0716 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0719 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_2729 RNA chaperone Hfq K03666 hfq; host factor-I protein D Dhaf_2107 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:dhd03030] D Dhaf_2410 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dhaf_1011 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Dhaf_0050 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dhaf_0061 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dhaf_4316 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dhaf_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dhaf_4929 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Dhaf_4217 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Dhaf_4935 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dhaf_3752 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Dhaf_1517 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:dhd03410] D Dhaf_3057 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Dhaf_2288 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Dhaf_4428 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Dhaf_1650 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Dhaf_1266 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Dhaf_2469 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Dhaf_0761 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Dhaf_3244 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Dhaf_1933 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Dhaf_1619 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Dhaf_4586 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Dhaf_3723 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Dhaf_1641 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Dhaf_3611 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dhaf_1517 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:dhd03420] D Dhaf_0131 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Dhaf_4734 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Dhaf_2265 ABC transporter related K03701 uvrA; excinuclease ABC subunit A D Dhaf_4735 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Dhaf_3041 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Dhaf_2319 Excinuclease ABC C subunit domain protein K03703 uvrC; excinuclease ABC subunit C D Dhaf_1514 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_2268 ATP-dependent DNA helicase replicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_1963 helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_0641 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_1517 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Dhaf_2947 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:dhd03430] D Dhaf_2735 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Dhaf_0230 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Dhaf_2732 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Dhaf_1514 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_2268 ATP-dependent DNA helicase replicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_1963 helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_0641 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_3493 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Dhaf_3492 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Dhaf_3611 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dhaf_4935 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dhaf_2410 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dhaf_1011 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Dhaf_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dhaf_0050 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dhaf_4316 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dhaf_0061 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dhaf_1517 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Dhaf_0179 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Dhaf_0632 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:dhd03440] D Dhaf_3611 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dhaf_4935 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dhaf_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Dhaf_4273 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Dhaf_0052 recombination protein RecR K06187 recR; recombination protein RecR D Dhaf_3106 recA protein K03553 recA; recombination protein RecA D Dhaf_3626 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Dhaf_3625 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dhaf_3627 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Dhaf_3834 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Dhaf_4703 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Dhaf_2410 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dhaf_1011 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Dhaf_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dhaf_0050 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dhaf_4316 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dhaf_0061 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dhaf_3854 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:dhd03450] D Dhaf_3719 Ku protein K10979 ku; DNA end-binding protein Ku D Dhaf_0568 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:dhd02010] D Dhaf_4118 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Dhaf_4117 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Dhaf_4116 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Dhaf_4115 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Dhaf_3641 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dhaf_1356 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dhaf_1920 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dhaf_3643 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Dhaf_1357 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Dhaf_3642 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dhaf_1358 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dhaf_1919 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dhaf_4560 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Dhaf_2226 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Dhaf_4559 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Dhaf_2227 binding-protein-dependent transport systems inner membrane component K02018 modB; molybdate transport system permease protein D Dhaf_4558 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Dhaf_2228 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Dhaf_2583 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Dhaf_2582 Ornithine carbamoyltransferase K11070 potC; spermidine/putrescine transport system permease protein D Dhaf_2581 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Dhaf_2580 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Dhaf_2308 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Dhaf_2309 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Dhaf_2310 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Dhaf_2802 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Dhaf_2803 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Dhaf_2804 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Dhaf_1671 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Dhaf_2164 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Dhaf_2630 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Dhaf_2259 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Dhaf_2257 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Dhaf_2256 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Dhaf_2258 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Dhaf_1249 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Dhaf_1250 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Dhaf_1251 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Dhaf_1252 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Dhaf_4752 extracellular solute-binding protein family 3 K10036 glnH; glutamine transport system substrate-binding protein D Dhaf_4751 polar amino acid ABC transporter, inner membrane subunit K10037 glnP; glutamine transport system permease protein D Dhaf_4750 ABC transporter related K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D Dhaf_1043 extracellular solute-binding protein family 3 K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D Dhaf_1045 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D Dhaf_1044 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D Dhaf_1042 ABC transporter related K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D Dhaf_2296 extracellular solute-binding protein family 3 K17073 lysX1; putative lysine transport system substrate-binding protein D Dhaf_2297 polar amino acid ABC transporter, inner membrane subunit K17074 lysX2; putative lysine transport system permease protein D Dhaf_2298 ABC transporter related K17076 lysY; putative lysine transport system ATP-binding protein D Dhaf_4926 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dhaf_0110 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dhaf_4925 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Dhaf_4924 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Dhaf_4923 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dhaf_4922 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dhaf_1485 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein D Dhaf_1486 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Dhaf_1487 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein D Dhaf_3016 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Dhaf_3020 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Dhaf_3019 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Dhaf_3018 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Dhaf_3017 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Dhaf_3973 extracellular solute-binding protein family 5 K15584 nikA; nickel transport system substrate-binding protein D Dhaf_3977 binding-protein-dependent transport systems inner membrane component K15585 nikB; nickel transport system permease protein D Dhaf_3976 binding-protein-dependent transport systems inner membrane component K15586 nikC; nickel transport system permease protein D Dhaf_3975 ABC transporter related K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D Dhaf_3974 ABC transporter related K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D Dhaf_2085 periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Dhaf_2086 transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D Dhaf_2087 transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D Dhaf_2088 ABC transporter related K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Dhaf_0042 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Dhaf_0044 ABC-3 protein K09816 znuB; zinc transport system permease protein D Dhaf_0043 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Dhaf_0030 periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D Dhaf_0032 ABC-3 protein K11708 troC; manganese/zinc/iron transport system permease protein D Dhaf_0033 ABC-3 protein K11709 troD; manganese/zinc/iron transport system permease protein D Dhaf_0031 ABC transporter related K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D Dhaf_2602 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein D Dhaf_2601 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Dhaf_2603 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Dhaf_2604 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Dhaf_0998 BioY protein K03523 bioY; biotin transport system substrate-specific component D Dhaf_1768 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Dhaf_4773 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Dhaf_3887 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Dhaf_1702 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Dhaf_1000 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Dhaf_1700 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Dhaf_1701 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Dhaf_3239 ABC-2 type transporter K11051 cylB; multidrug/hemolysin transport system permease protein D Dhaf_3238 ABC transporter related K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D Dhaf_4466 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D Dhaf_4465 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Dhaf_3871 conserved hypothetical protein K20460 nukE; lantibiotic transport system permease protein D Dhaf_3872 conserved hypothetical protein K20461 nukG; lantibiotic transport system permease protein D Dhaf_3870 ABC transporter related K20459 nukF; lantibiotic transport system ATP-binding protein D Dhaf_1094 ABC transporter related K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Dhaf_2003 hypothetical protein K16905 K16905; fluoroquinolone transport system permease protein D Dhaf_2002 ABC-2 type transporter K16906 K16906; fluoroquinolone transport system permease protein D Dhaf_2001 ABC transporter related K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-] D Dhaf_0524 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Dhaf_0523 ABC transporter related K19083 braD; bacitracin transport system ATP-binding protein D Dhaf_0213 membrane protein NosY K19341 nosY; Cu-processing system permease protein D Dhaf_0214 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein D Dhaf_4741 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Dhaf_4742 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Dhaf_4770 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Dhaf_1940 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Dhaf_2127 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Dhaf_3971 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Dhaf_4629 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Dhaf_1941 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Dhaf_2128 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Dhaf_3970 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Dhaf_4630 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Dhaf_4769 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Dhaf_2849 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2848 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2245 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2014 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2359 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2168 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2246 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2169 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2015 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2358 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_1313 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Dhaf_0341 ABC transporter related K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Dhaf_1312 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Dhaf_0340 ABC transporter related K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Dhaf_1085 ABC transporter related K18231 msr; macrolide transport system ATP-binding/permease protein D Dhaf_0018 ABC transporter related K18231 msr; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:dhd03070] D Dhaf_3525 hypothetical protein K02456 gspG; general secretion pathway protein G D Dhaf_3532 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Dhaf_3618 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Dhaf_0404 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Dhaf_4714 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Dhaf_0442 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Dhaf_3621 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Dhaf_4959 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Dhaf_4747 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dhaf_3767 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Dhaf_3761 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Dhaf_2560 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dhaf_3345 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dhaf_0231 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dhaf_3363 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:dhd02020] D Dhaf_4049 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dhaf_2159 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dhaf_4050 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dhaf_1237 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dhaf_0924 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Dhaf_2147 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Dhaf_1249 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Dhaf_1070 2-alkenal reductase K04771 degP; serine protease Do [EC:3.4.21.107] D Dhaf_4189 flagellin domain protein K02406 fliC; flagellin D Dhaf_4167 flagellin domain protein K02406 fliC; flagellin D Dhaf_4127 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Dhaf_4199 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Dhaf_4625 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Dhaf_1586 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Dhaf_1164 UspA domain protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Dhaf_1587 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dhaf_4626 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dhaf_1975 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Dhaf_0622 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Dhaf_4415 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Dhaf_2075 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Dhaf_2059 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Dhaf_0621 putative tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein D Dhaf_1974 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D Dhaf_2074 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D Dhaf_4414 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D Dhaf_1971 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Dhaf_2078 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Dhaf_4416 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Dhaf_2061 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Dhaf_3738 histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D Dhaf_3739 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD D Dhaf_1367 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD D Dhaf_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Dhaf_2996 Chromosomal replication initiator DnaA domain protein K02313 dnaA; chromosomal replication initiator protein D Dhaf_0524 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Dhaf_0523 ABC transporter related K19083 braD; bacitracin transport system ATP-binding protein D Dhaf_0522 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Dhaf_0521 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Dhaf_0165 D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D Dhaf_0166 membrane bound O-acyl transferase MBOAT family protein K03739 dltB; membrane protein involved in D-alanine export D Dhaf_0167 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D Dhaf_0168 DltD domain protein K03740 dltD; D-alanine transfer protein D Dhaf_1841 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Dhaf_2158 histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Dhaf_1666 histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Dhaf_1665 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Dhaf_1664 D-alanine/D-alanine ligase K15739 vanB; D-alanine---(R)-lactate ligase [EC:6.1.2.1] D Dhaf_1661 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Dhaf_3547 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Dhaf_1663 VanW family protein K18346 vanW; vancomycin resistance protein VanW D Dhaf_1773 VanW family protein K18346 vanW; vancomycin resistance protein VanW D Dhaf_2230 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Dhaf_2231 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR D Dhaf_3229 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D Dhaf_1253 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D Dhaf_0916 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D Dhaf_4841 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D Dhaf_3481 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Dhaf_3021 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Dhaf_4208 citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D Dhaf_4207 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Dhaf_0901 Citrate (pro-3S)-lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Dhaf_3086 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Dhaf_4206 citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D Dhaf_4645 signal transduction histidine kinase regulating citrate/malate metabolism K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3] D Dhaf_4644 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR D Dhaf_1239 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR D Dhaf_4311 signal transduction histidine kinase regulating citrate/malate metabolism K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3] D Dhaf_4310 response regulator receiver and unknown domain protein K11615 malR; two-component system, CitB family, response regulator MalR D Dhaf_0902 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Dhaf_3085 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Dhaf_0915 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Dhaf_3687 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Dhaf_4693 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Dhaf_1284 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Dhaf_0286 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Dhaf_4191 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Dhaf_0099 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3] D Dhaf_2790 Sensor DegS domain protein K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Dhaf_1194 two component transcriptional regulator, LuxR family K07696 nreC; two-component system, NarL family, response regulator NreC D Dhaf_1230 two component transcriptional regulator, LuxR family K07696 nreC; two-component system, NarL family, response regulator NreC D Dhaf_1063 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Dhaf_1065 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Dhaf_1327 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0994 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0922 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_3047 sigma54 specific transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D Dhaf_0198 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_4719 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Dhaf_3556 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Dhaf_3271 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dhaf_0806 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dhaf_3367 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dhaf_2743 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Dhaf_0805 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Dhaf_3368 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Dhaf_3369 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D Dhaf_2741 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D Dhaf_4203 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Dhaf_2112 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4362 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0283 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1610 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0078 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0079 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0516 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0624 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1111 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1328 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1373 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_2082 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3478 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3311 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3774 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3784 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4543 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4888 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4154 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Dhaf_4120 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Dhaf_1611 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Dhaf_4155 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Dhaf_4540 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Dhaf_4140 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Dhaf_4153 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Dhaf_1067 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP D Dhaf_1793 TRAP dicarboxylate transporter-DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP D Dhaf_1068 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D Dhaf_1794 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D Dhaf_1069 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Dhaf_1795 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Dhaf_4632 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Dhaf_0536 pyrogallol hydroxytransferase K08358 ttrB; tetrathionate reductase subunit B D Dhaf_3158 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_1853 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_1859 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_2221 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_2762 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_4228 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0700 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0714 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0880 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0303 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_4590 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Dhaf_3979 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Dhaf_4320 transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Dhaf_4591 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Dhaf_1310 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Dhaf_1311 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Dhaf_4822 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Dhaf_4541 multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Dhaf_4197 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Dhaf_0755 arginase K01476 rocF; arginase [EC:3.5.3.1] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:dhd02024] D Dhaf_2729 RNA chaperone Hfq K03666 hfq; host factor-I protein D Dhaf_4375 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Dhaf_4376 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Dhaf_2517 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Dhaf_1587 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dhaf_4626 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dhaf_4926 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dhaf_0110 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dhaf_4925 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Dhaf_4924 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Dhaf_4923 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dhaf_4922 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dhaf_4303 LPXTG-motif cell wall anchor domain protein K20276 bapA; large repetitive protein D Dhaf_3638 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dhaf_3455 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dhaf_3158 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_1853 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_1859 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_2221 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_2762 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_4228 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0700 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0714 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0880 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0303 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_2808 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Dhaf_3039 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Dhaf_2952 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Dhaf_0915 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Dhaf_3687 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Dhaf_1841 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Dhaf_3016 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Dhaf_3020 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Dhaf_3019 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Dhaf_3018 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Dhaf_3017 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Dhaf_0337 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_1860 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_0453 4-phytase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_0611 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_0035 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_0331 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_2550 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_1271 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_2551 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_1272 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_0335 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_0612 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_0036 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_0330 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_1861 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_0454 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_2552 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_1273 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_0336 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_1862 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_0613 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_0037 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_0329 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_0455 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_1274 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_1863 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_0038 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_0456 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_2553 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_0614 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_0338 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_0615 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Dhaf_0457 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Dhaf_0039 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein D Dhaf_1275 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein D Dhaf_4959 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Dhaf_0098 Geranylgeranyl pyrophosphate synthase-like protein K02251 comQ; competence protein ComQ D Dhaf_3184 Polyprenyl synthetase K02251 comQ; competence protein ComQ D Dhaf_0099 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3] D Dhaf_3618 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Dhaf_0404 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Dhaf_4714 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Dhaf_0442 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Dhaf_3621 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Dhaf_4747 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dhaf_3767 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Dhaf_3761 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Dhaf_4841 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D Dhaf_3481 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Dhaf_3021 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:dhd02030] D Dhaf_2112 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4362 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0283 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1610 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0078 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0079 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0516 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0624 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1111 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1328 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1373 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_2082 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3478 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3311 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3774 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3784 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4543 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4888 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4155 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Dhaf_4154 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Dhaf_4120 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Dhaf_1611 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Dhaf_4540 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Dhaf_4140 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Dhaf_4130 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Dhaf_2263 CheC domain protein K03409 cheX; chemotaxis protein CheX D Dhaf_4153 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Dhaf_4129 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Dhaf_4203 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Dhaf_4149 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Dhaf_4143 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Dhaf_4142 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Dhaf_4199 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Dhaf_4200 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:dhd02040] D Dhaf_4151 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Dhaf_4150 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Dhaf_4149 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Dhaf_4148 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Dhaf_4147 Peptidase C14, ICE, catalytic subunit p20, active site K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Dhaf_4146 hypothetical protein K02413 fliJ; flagellar protein FliJ D Dhaf_4126 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Dhaf_4144 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Dhaf_4143 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Dhaf_4142 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Dhaf_4139 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Dhaf_4138 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Dhaf_4136 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Dhaf_4134 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Dhaf_4135 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Dhaf_4122 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Dhaf_4152 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Dhaf_4125 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Dhaf_4124 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE D Dhaf_4121 protein of unknown function DUF1078 domain protein K02391 flgF; flagellar basal-body rod protein FlgF D Dhaf_4123 protein of unknown function DUF1078 domain protein K02392 flgG; flagellar basal-body rod protein FlgG D Dhaf_4195 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Dhaf_4194 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Dhaf_4189 flagellin domain protein K02406 fliC; flagellin D Dhaf_4167 flagellin domain protein K02406 fliC; flagellin D Dhaf_4166 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2 D Dhaf_4165 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Dhaf_4199 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Dhaf_4200 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Dhaf_4197 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Dhaf_4216 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Dhaf_4719 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Dhaf_4127 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Dhaf_4715 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dhaf_2072 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:dhd04980] D Dhaf_2690 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-] D Dhaf_0839 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1729 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1732 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_1733 dihydropteroate synthase DHPS K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Dhaf_2639 dihydropteroate synthase DHPS K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:dhd01501] D Dhaf_1089 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Dhaf_3016 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Dhaf_3020 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Dhaf_3019 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Dhaf_3018 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Dhaf_3017 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Dhaf_2876 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_3787 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_0731 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_1934 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_3222 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_2099 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_3788 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_2877 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_1935 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_3223 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_2098 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_0730 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_1939 transcriptional regulator, TetR family K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon D Dhaf_0235 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Dhaf_0378 penicillin-binding protein, 1A family K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D Dhaf_4348 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:dhd01502] D Dhaf_2158 histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Dhaf_1666 histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Dhaf_1665 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Dhaf_1661 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Dhaf_2721 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dhaf_1342 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Dhaf_4842 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Dhaf_1664 D-alanine/D-alanine ligase K15739 vanB; D-alanine---(R)-lactate ligase [EC:6.1.2.1] D Dhaf_1662 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Dhaf_4067 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Dhaf_4066 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Dhaf_4063 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Dhaf_3547 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Dhaf_1663 VanW family protein K18346 vanW; vancomycin resistance protein VanW D Dhaf_1773 VanW family protein K18346 vanW; vancomycin resistance protein VanW C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dhd01503] D Dhaf_2324 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_0751 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_0071 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_4484 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_2674 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_4160 putative cell wall binding repeat 2-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_1070 2-alkenal reductase K04771 degP; serine protease Do [EC:3.4.21.107] D Dhaf_0165 D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D Dhaf_0166 membrane bound O-acyl transferase MBOAT family protein K03739 dltB; membrane protein involved in D-alanine export D Dhaf_0167 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D Dhaf_0168 DltD domain protein K03740 dltD; D-alanine transfer protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:dhd01000] C 01001 Protein kinases [BR:dhd01001] D Dhaf_3844 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Dhaf_2036 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Dhaf_4432 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Dhaf_4049 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dhaf_2147 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Dhaf_4625 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Dhaf_1586 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Dhaf_1164 UspA domain protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Dhaf_3738 histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D Dhaf_0522 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Dhaf_1841 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Dhaf_2158 histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Dhaf_1666 histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Dhaf_2230 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Dhaf_1006 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Dhaf_4693 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Dhaf_1284 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Dhaf_0286 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Dhaf_0099 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3] D Dhaf_2790 Sensor DegS domain protein K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Dhaf_3229 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D Dhaf_1253 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D Dhaf_0916 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D Dhaf_4645 signal transduction histidine kinase regulating citrate/malate metabolism K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3] D Dhaf_4311 signal transduction histidine kinase regulating citrate/malate metabolism K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3] D Dhaf_1339 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Dhaf_2452 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Dhaf_4305 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Dhaf_0494 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Dhaf_4673 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Dhaf_0197 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Dhaf_4155 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Dhaf_4590 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Dhaf_4541 multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Dhaf_1567 signal transduction histidine kinase, LytS K19694 chiS; two-component system, sensor histidine kinase ChiS D Dhaf_0411 signal transduction histidine kinase, LytS K19694 chiS; two-component system, sensor histidine kinase ChiS D Dhaf_0493 signal transduction histidine kinase, LytS K19694 chiS; two-component system, sensor histidine kinase ChiS C 01009 Protein phosphatases and associated proteins [BR:dhd01009] D Dhaf_3048 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Dhaf_2995 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dhaf_3847 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:dhd01002] D Dhaf_4023 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Dhaf_3524 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Dhaf_3831 spore protease K06012 gpr; spore protease [EC:3.4.24.78] D Dhaf_2740 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Dhaf_4055 peptidase U4 sporulation factor SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D Dhaf_1438 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Dhaf_1349 peptidase C26 K07010 K07010; putative glutamine amidotransferase D Dhaf_3043 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Dhaf_3253 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Dhaf_1475 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Dhaf_0946 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Dhaf_0836 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Dhaf_0993 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Dhaf_4302 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Dhaf_0915 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Dhaf_3687 Accessory gene regulator B K07813 agrB; accessory gene regulator B D Dhaf_3388 Abortive infection protein K07052 K07052; CAAX protease family protein D Dhaf_1562 Abortive infection protein K07052 K07052; CAAX protease family protein D Dhaf_3241 Abortive infection protein K07052 K07052; CAAX protease family protein D Dhaf_2720 Abortive infection protein K07052 K07052; CAAX protease family protein D Dhaf_3050 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Dhaf_3547 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Dhaf_1661 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Dhaf_3100 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Dhaf_2770 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Dhaf_3224 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Dhaf_2199 peptidase T-like protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Dhaf_1179 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9] D Dhaf_2717 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D Dhaf_3479 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Dhaf_0444 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Dhaf_4587 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Dhaf_1857 Xaa-Pro aminopeptidase-like protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Dhaf_1858 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Dhaf_1797 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Dhaf_4201 peptidase M28 K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10] D Dhaf_2902 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D Dhaf_2391 putative aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D Dhaf_2889 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D Dhaf_2973 isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D Dhaf_1293 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dhaf_0145 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dhaf_3121 Microtubule-severing ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dhaf_3276 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Dhaf_4342 peptidase M50 K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D Dhaf_3701 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Dhaf_1594 peptidase M55 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D Dhaf_2876 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_3787 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_0731 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_1934 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_3222 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_2099 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_3094 peptidase S58 DmpA K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D Dhaf_1070 2-alkenal reductase K04771 degP; serine protease Do [EC:3.4.21.107] D Dhaf_3443 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_2174 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_2745 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_3668 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_1647 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_2716 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_4515 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Dhaf_0527 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Dhaf_4368 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Dhaf_4930 Sigma 54 interacting domain protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Dhaf_4369 Sigma 54 interacting domain protein K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D Dhaf_2719 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Dhaf_3754 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dhaf_3289 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dhaf_2722 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dhaf_1675 peptidase S24 and S26 domain protein K03100 lepB; signal peptidase I [EC:3.4.21.89] D Dhaf_0847 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] D Dhaf_4427 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Dhaf_4739 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Dhaf_0084 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D Dhaf_2772 Rhomboid family protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D Dhaf_3482 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D Dhaf_1458 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease D Dhaf_3713 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Dhaf_3867 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Dhaf_3558 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Dhaf_0229 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Dhaf_0684 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Dhaf_4087 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D Dhaf_4088 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:dhd01003] D Dhaf_3413 glycosyl transferase family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D Dhaf_4379 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Dhaf_3178 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Dhaf_3196 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Dhaf_0235 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Dhaf_0378 penicillin-binding protein, 1A family K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D Dhaf_4762 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] C 01005 Lipopolysaccharide biosynthesis proteins [BR:dhd01005] D Dhaf_2535 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dhd01011] D Dhaf_4788 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Dhaf_4060 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Dhaf_4061 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Dhaf_0802 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Dhaf_4065 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Dhaf_4068 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Dhaf_2721 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Dhaf_1342 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Dhaf_4842 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Dhaf_4404 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Dhaf_4066 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Dhaf_4063 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Dhaf_0873 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Dhaf_3600 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Dhaf_4312 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Dhaf_0235 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Dhaf_0378 penicillin-binding protein, 1A family K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D Dhaf_4348 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Dhaf_4069 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Dhaf_2771 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Dhaf_3845 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A D Dhaf_3443 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_2174 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_2745 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_3668 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_1647 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_2716 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Dhaf_1661 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Dhaf_3547 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Dhaf_3043 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Dhaf_3253 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Dhaf_2717 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D Dhaf_4302 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Dhaf_2473 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Dhaf_3559 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Dhaf_4425 cell wall hydrolase SleB K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Dhaf_4849 spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Dhaf_3624 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Dhaf_4787 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Dhaf_2324 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_0751 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_0071 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_4484 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_2674 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_4160 putative cell wall binding repeat 2-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:dhd01004] D Dhaf_3818 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Dhaf_3820 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Dhaf_3814 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Dhaf_3341 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dhaf_3817 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dhaf_0608 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Dhaf_4758 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Dhaf_3819 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D Dhaf_4411 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Dhaf_3966 amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D Dhaf_0467 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Dhaf_3638 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dhaf_3455 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dhaf_0315 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Dhaf_3821 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Dhaf_2387 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dhaf_3380 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Dhaf_3386 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:dhd01008] D Dhaf_3966 amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D Dhaf_3967 AMP-dependent synthetase and ligase K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] D Dhaf_3965 amino acid adenylation domain protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69] C 01006 Prenyltransferases [BR:dhd01006] D Dhaf_3491 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Dhaf_3361 Polyprenyl synthetase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30] D Dhaf_3364 conserved hypothetical protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Dhaf_3705 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Dhaf_2730 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Dhaf_4028 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:dhd01007] D Dhaf_4882 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Dhaf_0396 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Dhaf_0237 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dhaf_1546 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dhaf_3426 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Dhaf_2136 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Dhaf_0398 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Dhaf_4846 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dhaf_0067 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Dhaf_4041 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Dhaf_4361 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Dhaf_4328 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dhaf_0163 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Dhaf_3586 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dhaf_4851 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Dhaf_3587 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dhaf_4255 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Dhaf_4254 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Dhaf_0008 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Dhaf_3699 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Dhaf_0185 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Dhaf_3565 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Dhaf_0219 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Dhaf_0220 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Dhaf_2311 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Dhaf_3098 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Dhaf_4564 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Dhaf_2403 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-] D Dhaf_1493 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Dhaf_4223 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Dhaf_0772 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Dhaf_3348 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Dhaf_4429 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Dhaf_2480 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Dhaf_4579 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:dhd00194] D Dhaf_0206 Cytochrome b/b6 domain protein K02635 petB; cytochrome b6 D Dhaf_0205 Rieske (2Fe-2S) domain protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6] D Dhaf_0207 subunit IV of cytochrome bc complex petd K02637 petD; cytochrome b6-f complex subunit 4 D Dhaf_4790 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Dhaf_4791 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Dhaf_4792 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Dhaf_4793 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Dhaf_4794 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Dhaf_4795 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Dhaf_4796 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Dhaf_4797 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dhaf_4799 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:dhd03000] D Dhaf_3480 transcriptional regulator, AraC family K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator D Dhaf_0011 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Dhaf_2210 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Dhaf_2323 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Dhaf_2251 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Dhaf_3983 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator D Dhaf_1333 methylated-DNA/protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D Dhaf_2102 transcriptional regulator, AraC family K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] D Dhaf_0616 transcriptional regulator, LysR family K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator D Dhaf_1778 transcriptional regulator, LysR family K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D Dhaf_4615 transcriptional regulator, LysR family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D Dhaf_1148 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Dhaf_0263 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Dhaf_4764 sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D Dhaf_4253 Helix-turn-helix type 11 domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator D Dhaf_3880 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Dhaf_2570 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Dhaf_2626 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Dhaf_2930 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Dhaf_0194 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Dhaf_4635 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Dhaf_1606 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Dhaf_3405 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Dhaf_3404 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Dhaf_2067 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Dhaf_4413 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Dhaf_4519 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Dhaf_2327 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Dhaf_1076 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Dhaf_1692 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Dhaf_2456 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Dhaf_3293 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Dhaf_3295 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Dhaf_4533 transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D Dhaf_1118 transcriptional regulator, TetR family K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon D Dhaf_1939 transcriptional regulator, TetR family K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon D Dhaf_2206 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Dhaf_3542 transcriptional regulator, AsnC family K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon D Dhaf_3265 transcriptional regulator, LuxR family K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein D Dhaf_4406 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Dhaf_1292 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Dhaf_4233 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D Dhaf_0226 transcriptional regulator, MerR family K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene D Dhaf_2982 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Dhaf_0045 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Dhaf_3001 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Dhaf_4078 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Dhaf_3158 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_1853 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_1859 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_2221 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_2762 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_4228 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0700 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0714 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0880 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_0303 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Dhaf_1507 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Dhaf_3790 transcriptional regulator, Crp/Fnr family K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator D Dhaf_0733 cyclic nucleotide-binding protein K21558 cprK; CRP/FNR family transcriptional regulator, reductive dehalogenation system regulator D Dhaf_1167 transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Dhaf_0702 cyclic nucleotide-binding protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Dhaf_3582 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Dhaf_1145 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Dhaf_1224 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Dhaf_1191 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Dhaf_1211 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Dhaf_3114 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Dhaf_0925 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Dhaf_0928 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Dhaf_4510 transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D Dhaf_0945 transcriptional regulator, XRE family K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D Dhaf_1680 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Dhaf_2172 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Dhaf_2191 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Dhaf_3375 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Dhaf_0961 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Dhaf_1119 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Dhaf_1581 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Dhaf_3457 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Dhaf_3776 iron dependent repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Dhaf_0029 iron dependent repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Dhaf_3788 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_2877 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_1935 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_3223 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_2098 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_0730 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_0159 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Dhaf_1142 transcriptional regulator, XRE family K22299 rghR; HTH-type transcriptional regulator, competence development regulator D Dhaf_0089 purine operon repressor, PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor D Dhaf_2509 PAS modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_0515 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_1900 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_2047 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_1867 PAS modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_1877 PAS modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_2373 PAS modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_2964 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_2983 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_3148 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_4608 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_0464 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_0233 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_0531 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_0585 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_1014 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_0306 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Dhaf_1727 PAS modulated sigma54 specific transcriptional regulator, Fis family K06714 rocR; arginine utilization regulatory protein D Dhaf_4356 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Dhaf_3711 GTP-sensing pleiotropic transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor D Dhaf_4238 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Dhaf_0500 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Dhaf_2426 putative transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Dhaf_0636 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Dhaf_1573 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Dhaf_0094 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Dhaf_0543 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Dhaf_0019 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Dhaf_2496 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Dhaf_1347 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Dhaf_1638 FMN-binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Dhaf_2342 FMN-binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Dhaf_4220 FMN-binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Dhaf_0694 FMN-binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Dhaf_0698 FMN-binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Dhaf_0717 FMN-binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Dhaf_0738 FMN-binding domain protein K21559 cprC; NosR/NirI family transcriptional regulator, putative reductive dehalogenation system regulator D Dhaf_0101 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Dhaf_0333 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Dhaf_3728 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Dhaf_3585 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Dhaf_0855 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Dhaf_1801 transcriptional regulator, PucR family K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D Dhaf_1182 transcriptional regulator, CdaR K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D Dhaf_3770 transcriptional regulator, CdaR K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator D Dhaf_0789 putative transcriptional regulator, PucR family K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator D Dhaf_0065 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Dhaf_0133 transcriptional regulator, AbrB family K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D Dhaf_4953 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Dhaf_0392 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Dhaf_2124 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Dhaf_3201 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Dhaf_3484 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Dhaf_4301 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Dhaf_0386 transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D Dhaf_1326 putative sigma54 specific transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D Dhaf_2843 phage shock protein C, PspC K03973 pspC; phage shock protein C D Dhaf_1319 phage shock protein C, PspC K03973 pspC; phage shock protein C D Dhaf_1233 phage shock protein C, PspC K03973 pspC; phage shock protein C D Dhaf_4883 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase D Dhaf_4020 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Dhaf_0266 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Dhaf_4072 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:dhd03021] D Dhaf_2947 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Dhaf_0450 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Dhaf_0414 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Dhaf_0415 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Dhaf_4845 DNA-directed RNA polymerase delta subunit, putative K03048 rpoE; DNA-directed RNA polymerase subunit delta D Dhaf_3893 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Dhaf_4216 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Dhaf_3598 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dhaf_2113 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dhaf_2886 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dhaf_3330 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dhaf_1092 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dhaf_0766 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dhaf_3164 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dhaf_0912 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dhaf_0106 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dhaf_2805 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dhaf_1112 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Dhaf_3546 RNA polymerase, sigma 28 subunit, SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Dhaf_3442 RNA polymerase, sigma 28 subunit, SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Dhaf_4053 RNA polymerase, sigma 28 subunit, SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Dhaf_4054 RNA polymerase, sigma 28 subunit, SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Dhaf_0402 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor D Dhaf_2812 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor D Dhaf_4761 RNA polymerase, sigma 28 subunit, SigI K03093 sigI; RNA polymerase sigma-I factor D Dhaf_4719 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Dhaf_4127 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Dhaf_3679 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Dhaf_3504 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Dhaf_0405 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Dhaf_1749 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Dhaf_4431 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D Dhaf_4432 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Dhaf_0162 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA C 03019 Messenger RNA biogenesis [BR:dhd03019] D Dhaf_4339 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Dhaf_3813 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Dhaf_3657 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Dhaf_3518 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Dhaf_3104 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Dhaf_1595 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Dhaf_3118 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Dhaf_2927 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Dhaf_2928 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Dhaf_0673 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Dhaf_4715 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dhaf_2072 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dhaf_3670 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Dhaf_2995 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Dhaf_4299 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Dhaf_1406 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0735 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0740 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0716 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0719 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_2729 RNA chaperone Hfq K03666 hfq; host factor-I protein D Dhaf_2107 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Dhaf_4191 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Dhaf_4722 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome [BR:dhd03041] C 03011 Ribosome [BR:dhd03011] D Dhaf_3385 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D Dhaf_3709 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Dhaf_0428 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Dhaf_0449 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Dhaf_0439 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Dhaf_4936 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Dhaf_0418 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Dhaf_0436 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Dhaf_0727 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Dhaf_0421 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Dhaf_0448 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Dhaf_0417 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Dhaf_0447 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Dhaf_0435 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Dhaf_3671 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Dhaf_3760 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Dhaf_0431 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Dhaf_4934 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Dhaf_0426 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Dhaf_4315 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Dhaf_4292 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Dhaf_0407 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Dhaf_0425 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Dhaf_0422 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Dhaf_0423 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Dhaf_0434 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Dhaf_0437 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Dhaf_4931 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Dhaf_0408 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Dhaf_0406 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Dhaf_0409 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Dhaf_0726 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Dhaf_0432 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Dhaf_0441 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Dhaf_0429 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Dhaf_0451 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Dhaf_0438 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Dhaf_3755 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Dhaf_0217 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Dhaf_4338 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Dhaf_0427 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Dhaf_0424 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Dhaf_0433 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Dhaf_4336 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Dhaf_3839 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Dhaf_0430 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Dhaf_0440 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Dhaf_4835 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Dhaf_3824 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Dhaf_0403 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Dhaf_4961 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Dhaf_0216 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Dhaf_0446 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Dhaf_0750 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Dhaf_0416 ribosomal protein L7AE family protein K07590 RP-L7A; large subunit ribosomal protein L7A D Dhaf_R0021 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0078 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0065 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0070 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0061 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0073 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0080 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0079 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0064 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0071 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:dhd03009] D Dhaf_3813 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Dhaf_4275 GTP-binding protein Era K03595 era; GTPase D Dhaf_4334 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Dhaf_3679 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Dhaf_3504 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Dhaf_0405 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Dhaf_0074 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Dhaf_3851 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Dhaf_3830 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Dhaf_4296 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Dhaf_4955 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Dhaf_4071 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Dhaf_0064 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Dhaf_2731 protein of unknown function DUF548 K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D Dhaf_3487 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Dhaf_0279 conserved hypothetical protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Dhaf_0401 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Dhaf_4914 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Dhaf_3850 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Dhaf_1583 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Dhaf_3411 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Dhaf_2390 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Dhaf_0461 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Dhaf_4022 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Dhaf_1392 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Dhaf_2448 GCN5-related N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D Dhaf_3758 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Dhaf_3124 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Dhaf_4297 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Dhaf_4339 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Dhaf_3562 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Dhaf_0399 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D Dhaf_3118 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Dhaf_2927 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Dhaf_2897 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Dhaf_3843 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Dhaf_3381 small GTP-binding protein K03977 engA; GTPase D Dhaf_3753 GTP1/OBG protein K14540 rbgA; ribosome biogenesis GTPase A D Dhaf_2724 GTP-binding proten HflX K03665 hflX; GTPase D Dhaf_4831 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Dhaf_3609 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Dhaf_3675 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Dhaf_3680 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Dhaf_4329 iojap-like protein K09710 ybeB; ribosome-associated protein D Dhaf_4278 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Dhaf_4333 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Dhaf_4748 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Dhaf_4937 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Dhaf_3825 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:dhd03016] D Dhaf_3428 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Dhaf_2544 metal dependent phophohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Dhaf_2546 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Dhaf_3699 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Dhaf_4041 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Dhaf_4328 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dhaf_0067 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Dhaf_4882 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Dhaf_4846 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dhaf_0163 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Dhaf_3586 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dhaf_3565 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Dhaf_4851 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Dhaf_0185 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Dhaf_0008 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Dhaf_0398 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Dhaf_4361 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Dhaf_3587 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Dhaf_0219 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Dhaf_0220 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Dhaf_0237 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dhaf_1546 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dhaf_3426 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Dhaf_2136 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Dhaf_3608 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Dhaf_4293 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Dhaf_3167 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Dhaf_2238 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Dhaf_2599 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Dhaf_0024 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Dhaf_1330 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Dhaf_0468 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Dhaf_3673 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Dhaf_3581 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dhaf_4831 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Dhaf_2730 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Dhaf_4957 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Dhaf_4956 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Dhaf_4589 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Dhaf_4960 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Dhaf_R0081 RNA component of RNaseP K01978 rnpB; M1 RNA D Dhaf_4389 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Dhaf_2282 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Dhaf_4255 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Dhaf_4254 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Dhaf_0396 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Dhaf_4879 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Dhaf_0009 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Dhaf_0161 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Dhaf_2738 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Dhaf_4295 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Dhaf_3716 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Dhaf_3757 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Dhaf_4215 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D Dhaf_2405 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Dhaf_0218 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family D Dhaf_3579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Dhaf_3623 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Dhaf_3217 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Dhaf_2396 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Dhaf_0689 reductive dehalogenase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Dhaf_3130 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D Dhaf_3622 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Dhaf_0144 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Dhaf_1391 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Dhaf_1393 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Dhaf_1390 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Dhaf_1368 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Dhaf_3670 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:dhd03012] D Dhaf_3676 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Dhaf_0215 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Dhaf_2470 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Dhaf_3313 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Dhaf_3708 translation elongation factor Ts K02357 tsf; elongation factor Ts D Dhaf_0420 translation elongation factor Tu K02358 tuf; elongation factor Tu D Dhaf_0419 translation elongation factor G K02355 fusA; elongation factor G D Dhaf_2972 translation elongation factor G K02355 fusA; elongation factor G D Dhaf_4266 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D Dhaf_4833 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Dhaf_3706 ribosome recycling factor K02838 frr; ribosome recycling factor D Dhaf_4832 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Dhaf_0119 Aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Dhaf_0445 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Dhaf_3519 translation elongation factor P K02356 efp; elongation factor P D Dhaf_4746 hypothetical protein K02836 prfB; peptide chain release factor 2 D Dhaf_3254 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:dhd03110] D Dhaf_2814 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Dhaf_0389 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Dhaf_4377 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Dhaf_3712 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Dhaf_3230 heat shock protein Hsp90 K09488 TRAP1; TNF receptor-associated protein 1 D Dhaf_4299 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Dhaf_1406 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0735 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0740 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0716 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0719 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_4298 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Dhaf_2533 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Dhaf_3840 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Dhaf_4300 GrpE protein K03687 GRPE; molecular chaperone GrpE D Dhaf_3725 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Dhaf_1695 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Dhaf_1405 chaperonin Cpn10 K04078 groES; chaperonin GroES D Dhaf_1070 2-alkenal reductase K04771 degP; serine protease Do [EC:3.4.21.107] D Dhaf_1293 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dhaf_0145 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dhaf_3121 Microtubule-severing ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Dhaf_4797 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Dhaf_4944 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Dhaf_4943 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Dhaf_1226 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_0546 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_4784 hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_1632 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_0291 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_1635 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_4222 hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_0126 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_0482 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_1198 anaerobic dehydrogenase protein-like protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_1209 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_1512 hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Dhaf_2997 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Dhaf_0132 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Dhaf_0850 Thioredoxin domain protein K03671 TXN; thioredoxin D Dhaf_3584 thioredoxin K03671 TXN; thioredoxin D Dhaf_1217 Thioredoxin domain protein K03671 TXN; thioredoxin D Dhaf_1825 Thioredoxin domain protein K03671 TXN; thioredoxin D Dhaf_4889 Thioredoxin domain protein K03671 TXN; thioredoxin D Dhaf_0241 Thioredoxin domain protein K03671 TXN; thioredoxin D Dhaf_0626 Thioredoxin domain protein K03671 TXN; thioredoxin D Dhaf_0859 Thioredoxin domain protein K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:dhd04131] D Dhaf_0146 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Dhaf_0784 conserved hypothetical protein K15620 GOLPH3; golgi phosphoprotein 3 D Dhaf_3314 band 7 protein K07192 FLOT; flotillin D Dhaf_1189 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Dhaf_2781 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dhaf_2637 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dhaf_2756 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dhaf_2755 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Dhaf_3786 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:dhd04121] C 03051 Proteasome [BR:dhd03051] C 03032 DNA replication proteins [BR:dhd03032] D Dhaf_0135 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Dhaf_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Dhaf_2996 Chromosomal replication initiator DnaA domain protein K02313 dnaA; chromosomal replication initiator protein D Dhaf_4929 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Dhaf_2785 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC D Dhaf_4217 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Dhaf_4935 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dhaf_2410 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dhaf_1011 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Dhaf_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dhaf_4316 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dhaf_0061 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dhaf_0050 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dhaf_3752 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Dhaf_1517 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Dhaf_0179 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Dhaf_0632 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Dhaf_0006 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Dhaf_2677 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Dhaf_2676 DNA topoisomerase (ATP-hydrolyzing) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Dhaf_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Dhaf_3717 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Dhaf_4786 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D Dhaf_3236 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:dhd03036] D Dhaf_3813 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Dhaf_3314 band 7 protein K07192 FLOT; flotillin D Dhaf_0135 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Dhaf_2533 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Dhaf_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Dhaf_2996 Chromosomal replication initiator DnaA domain protein K02313 dnaA; chromosomal replication initiator protein D Dhaf_2729 RNA chaperone Hfq K03666 hfq; host factor-I protein D Dhaf_2206 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Dhaf_3812 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Dhaf_3425 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Dhaf_3424 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Dhaf_0141 Septum formation initiator K13052 divIC; cell division protein DivIC D Dhaf_4742 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Dhaf_2954 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Dhaf_3131 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Dhaf_4070 Septum formation initiator K03586 ftsL; cell division protein FtsL D Dhaf_4059 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Dhaf_4064 stage V sporulation protein E K03588 ftsW; cell division protein FtsW D Dhaf_3384 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Dhaf_4741 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Dhaf_4057 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dhaf_0221 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Dhaf_2324 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_0751 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_0071 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_4484 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_2674 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_4160 putative cell wall binding repeat 2-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_4347 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Dhaf_4346 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Dhaf_4345 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Dhaf_4043 DivIVA family protein K04074 divIVA; cell division initiation protein D Dhaf_4046 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF D Dhaf_4763 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Dhaf_4351 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Dhaf_4350 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Dhaf_4349 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Dhaf_4344 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Dhaf_0962 cell division membrane protein-like protein K05837 rodA; rod shape determining protein RodA D Dhaf_4954 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Dhaf_4953 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Dhaf_4956 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Dhaf_4955 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Dhaf_3716 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Dhaf_3715 integrase family protein K03733 xerC; integrase/recombinase XerC D Dhaf_3450 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Dhaf_1439 integrase family protein K04763 xerD; integrase/recombinase XerD D Dhaf_0134 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein D Dhaf_1130 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Dhaf_3334 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Dhaf_1819 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Dhaf_4488 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Dhaf_0086 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Dhaf_4367 small GTP-binding protein domain protein K03978 engB; GTP-binding protein D Dhaf_4720 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:dhd03400] D Dhaf_4647 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Dhaf_2103 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Dhaf_2288 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Dhaf_1650 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Dhaf_4428 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Dhaf_3057 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Dhaf_2947 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Dhaf_2293 mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Dhaf_3666 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Dhaf_1333 methylated-DNA/protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D Dhaf_2102 transcriptional regulator, AraC family K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] D Dhaf_1619 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Dhaf_3244 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Dhaf_1933 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Dhaf_1266 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Dhaf_2469 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Dhaf_0761 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Dhaf_4586 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Dhaf_3723 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Dhaf_1641 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Dhaf_3611 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Dhaf_1517 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Dhaf_4734 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Dhaf_2265 ABC transporter related K03701 uvrA; excinuclease ABC subunit A D Dhaf_4735 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Dhaf_3041 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Dhaf_2319 Excinuclease ABC C subunit domain protein K03703 uvrC; excinuclease ABC subunit C D Dhaf_1514 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_2268 ATP-dependent DNA helicase replicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_1963 helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_0641 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Dhaf_0414 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Dhaf_0415 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Dhaf_0450 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Dhaf_4845 DNA-directed RNA polymerase delta subunit, putative K03048 rpoE; DNA-directed RNA polymerase subunit delta D Dhaf_3893 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Dhaf_0131 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Dhaf_2735 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Dhaf_0230 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Dhaf_2732 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Dhaf_3493 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Dhaf_3492 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Dhaf_2410 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Dhaf_1011 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Dhaf_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Dhaf_4316 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Dhaf_0061 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Dhaf_0050 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Dhaf_4935 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dhaf_0179 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Dhaf_0632 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Dhaf_3106 recA protein K03553 recA; recombination protein RecA D Dhaf_3626 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Dhaf_3625 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Dhaf_3627 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Dhaf_3854 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Dhaf_0760 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Dhaf_0759 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D Dhaf_0390 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Dhaf_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Dhaf_3834 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Dhaf_4703 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Dhaf_4273 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Dhaf_0052 recombination protein RecR K06187 recR; recombination protein RecR D Dhaf_3483 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Dhaf_2832 recombination helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Dhaf_2833 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Dhaf_3931 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Dhaf_2188 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Dhaf_3719 Ku protein K10979 ku; DNA end-binding protein Ku D Dhaf_0568 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Dhaf_0006 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Dhaf_2677 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Dhaf_2676 DNA topoisomerase (ATP-hydrolyzing) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Dhaf_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Dhaf_3717 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Dhaf_0135 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Dhaf_2928 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Dhaf_0673 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Dhaf_1154 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Dhaf_0370 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Dhaf_2719 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Dhaf_4089 DNA-damage-inducible protein D K14623 dinD; DNA-damage-inducible protein D D Dhaf_3105 regulatory protein RecX K03565 recX; regulatory protein D Dhaf_3029 DnaQ family exonuclease/DinG family helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Dhaf_1574 DEAD/H associated domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Dhaf_0267 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Dhaf_3674 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:dhd03029] D Dhaf_3676 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Dhaf_0215 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Dhaf_3708 translation elongation factor Ts K02357 tsf; elongation factor Ts D Dhaf_0420 translation elongation factor Tu K02358 tuf; elongation factor Tu D Dhaf_0419 translation elongation factor G K02355 fusA; elongation factor G D Dhaf_2972 translation elongation factor G K02355 fusA; elongation factor G D Dhaf_4275 GTP-binding protein Era K03595 era; GTPase D Dhaf_0237 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dhaf_1546 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Dhaf_4328 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Dhaf_3586 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Dhaf_4846 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Dhaf_1519 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Dhaf_1520 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Dhaf_4622 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Dhaf_1518 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Dhaf_4624 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Dhaf_4935 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Dhaf_4299 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Dhaf_4300 GrpE protein K03687 GRPE; molecular chaperone GrpE D Dhaf_1406 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0735 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0740 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0716 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0719 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_1405 chaperonin Cpn10 K04078 groES; chaperonin GroES D Dhaf_4298 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Dhaf_3581 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Dhaf_4959 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Dhaf_0815 band 7 protein K17080 PHB1; prohibitin 1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:dhd02000] D Dhaf_4770 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Dhaf_1940 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Dhaf_2127 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Dhaf_3971 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Dhaf_4629 ABC transporter related K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Dhaf_1941 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Dhaf_2128 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Dhaf_3970 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Dhaf_4630 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Dhaf_4769 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Dhaf_2849 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2848 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2245 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2014 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2359 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2168 ABC transporter related K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2246 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2169 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2015 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2358 ABC transporter related K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Dhaf_2528 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Dhaf_1811 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Dhaf_2299 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Dhaf_1313 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Dhaf_0341 ABC transporter related K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Dhaf_1312 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Dhaf_0340 ABC transporter related K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Dhaf_1085 ABC transporter related K18231 msr; macrolide transport system ATP-binding/permease protein D Dhaf_0018 ABC transporter related K18231 msr; macrolide transport system ATP-binding/permease protein D Dhaf_3220 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein D Dhaf_4118 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Dhaf_4117 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Dhaf_4116 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Dhaf_4115 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Dhaf_4560 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Dhaf_2226 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Dhaf_4559 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Dhaf_2227 binding-protein-dependent transport systems inner membrane component K02018 modB; molybdate transport system permease protein D Dhaf_4558 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Dhaf_2228 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Dhaf_3641 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dhaf_1356 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dhaf_1920 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein D Dhaf_3643 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Dhaf_1357 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Dhaf_3642 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dhaf_1358 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dhaf_1919 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Dhaf_2583 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Dhaf_2582 Ornithine carbamoyltransferase K11070 potC; spermidine/putrescine transport system permease protein D Dhaf_2581 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Dhaf_2580 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Dhaf_2308 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Dhaf_2309 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Dhaf_2310 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Dhaf_2802 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Dhaf_2803 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Dhaf_2804 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Dhaf_2659 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Dhaf_2612 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Dhaf_3902 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Dhaf_4555 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Dhaf_1918 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Dhaf_2658 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Dhaf_2613 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Dhaf_3901 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Dhaf_4556 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Dhaf_0877 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Dhaf_2657 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Dhaf_2614 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Dhaf_3900 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Dhaf_4557 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Dhaf_1671 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Dhaf_2164 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Dhaf_2630 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Dhaf_2259 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Dhaf_2257 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Dhaf_2256 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Dhaf_2258 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Dhaf_1672 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Dhaf_2165 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Dhaf_2627 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Dhaf_4723 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Dhaf_2160 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Dhaf_1667 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Dhaf_2631 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Dhaf_2161 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Dhaf_1668 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Dhaf_2632 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Dhaf_1249 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Dhaf_1250 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Dhaf_1251 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Dhaf_1252 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Dhaf_4752 extracellular solute-binding protein family 3 K10036 glnH; glutamine transport system substrate-binding protein D Dhaf_4751 polar amino acid ABC transporter, inner membrane subunit K10037 glnP; glutamine transport system permease protein D Dhaf_4750 ABC transporter related K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D Dhaf_1043 extracellular solute-binding protein family 3 K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D Dhaf_1045 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D Dhaf_1044 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D Dhaf_1042 ABC transporter related K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D Dhaf_4926 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dhaf_0110 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Dhaf_4925 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Dhaf_4924 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Dhaf_4923 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D Dhaf_4922 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein D Dhaf_1485 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein D Dhaf_1486 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein D Dhaf_1487 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein D Dhaf_4553 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Dhaf_2828 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Dhaf_1947 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Dhaf_4552 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein D Dhaf_2829 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein D Dhaf_1946 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein D Dhaf_4551 ABC transporter related K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D Dhaf_2830 ABC transporter related K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D Dhaf_1945 ABC transporter related K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D Dhaf_2296 extracellular solute-binding protein family 3 K17073 lysX1; putative lysine transport system substrate-binding protein D Dhaf_2297 polar amino acid ABC transporter, inner membrane subunit K17074 lysX2; putative lysine transport system permease protein D Dhaf_2298 ABC transporter related K17076 lysY; putative lysine transport system ATP-binding protein D Dhaf_4550 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Dhaf_0746 ectoine/hydroxyectoine ABC transporter solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Dhaf_4582 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Dhaf_3796 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Dhaf_4549 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Dhaf_4585 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Dhaf_0747 ectoine/hydroxyectoine ABC transporter, permease protein EhuC K02029 ABC.PA.P; polar amino acid transport system permease protein D Dhaf_0748 ectoine/hydroxyectoine ABC transporter, permease protein EhuD K02029 ABC.PA.P; polar amino acid transport system permease protein D Dhaf_4584 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Dhaf_3795 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Dhaf_3794 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Dhaf_0749 ectoine/hydroxyectoine ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Dhaf_4583 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Dhaf_4548 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Dhaf_3016 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein D Dhaf_3020 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein D Dhaf_3019 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein D Dhaf_3018 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Dhaf_3017 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Dhaf_3973 extracellular solute-binding protein family 5 K15584 nikA; nickel transport system substrate-binding protein D Dhaf_3977 binding-protein-dependent transport systems inner membrane component K15585 nikB; nickel transport system permease protein D Dhaf_3976 binding-protein-dependent transport systems inner membrane component K15586 nikC; nickel transport system permease protein D Dhaf_3975 ABC transporter related K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D Dhaf_3974 ABC transporter related K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D Dhaf_0337 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_1860 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_0453 4-phytase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_0611 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_0035 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_0331 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_2550 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_1271 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Dhaf_2551 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_1272 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_0335 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_0612 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_0036 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_0330 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_1861 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_0454 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Dhaf_2552 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_1273 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_0336 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_1862 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_0613 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_0037 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_0329 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_0455 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Dhaf_1274 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_1863 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_0038 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_0456 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_2553 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_0614 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_0338 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Dhaf_0615 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Dhaf_0457 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Dhaf_0039 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein D Dhaf_1275 ABC transporter related K02032 ddpF; peptide/nickel transport system ATP-binding protein D Dhaf_1812 transport system permease protein K25288 fhuB; ferric hydroxamate/heme transport system permease protein D Dhaf_1813 transport system permease protein K25289 fhuG; ferric hydroxamate/heme transport system permease protein D Dhaf_1814 ABC transporter related K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16] D Dhaf_2085 periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Dhaf_2086 transport system permease protein K23186 fepD; iron-siderophore transport system permease protein D Dhaf_2087 transport system permease protein K23187 fepG; iron-siderophore transport system permease protein D Dhaf_2088 ABC transporter related K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Dhaf_2916 periplasmic binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D Dhaf_2914 transport system permease protein K25283 yclO; iron-siderophore transport system permease protein D Dhaf_2915 transport system permease protein K25284 yclN; iron-siderophore transport system permease protein D Dhaf_2913 ABC transporter related K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D Dhaf_4265 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Dhaf_0343 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Dhaf_1810 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Dhaf_0025 FMN-binding domain protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Dhaf_1544 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Dhaf_2225 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Dhaf_4263 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Dhaf_0344 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Dhaf_1542 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Dhaf_0026 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Dhaf_2222 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Dhaf_4264 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Dhaf_0345 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Dhaf_0027 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Dhaf_1543 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Dhaf_2223 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Dhaf_3249 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Dhaf_3251 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Dhaf_3252 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Dhaf_0042 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Dhaf_0044 ABC-3 protein K09816 znuB; zinc transport system permease protein D Dhaf_0043 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Dhaf_0030 periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D Dhaf_0032 ABC-3 protein K11708 troC; manganese/zinc/iron transport system permease protein D Dhaf_0033 ABC-3 protein K11709 troD; manganese/zinc/iron transport system permease protein D Dhaf_0031 ABC transporter related K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D Dhaf_2998 periplasmic solute binding protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein D Dhaf_3000 ABC-3 protein K09819 ABC.MN.P; manganese/iron transport system permease protein D Dhaf_2999 ABC transporter related K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein D Dhaf_2602 cobalt transport protein K02009 cbiN; cobalt/nickel transport protein D Dhaf_2603 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Dhaf_2601 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Dhaf_2604 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Dhaf_0998 BioY protein K03523 bioY; biotin transport system substrate-specific component D Dhaf_4774 conserved hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component D Dhaf_1769 conserved hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component D Dhaf_1768 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Dhaf_4773 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Dhaf_3887 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Dhaf_1702 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Dhaf_1000 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Dhaf_1700 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Dhaf_1701 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Dhaf_3888 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Dhaf_0999 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Dhaf_4772 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Dhaf_1767 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Dhaf_3239 ABC-2 type transporter K11051 cylB; multidrug/hemolysin transport system permease protein D Dhaf_3238 ABC transporter related K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D Dhaf_4466 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D Dhaf_4465 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Dhaf_3870 ABC transporter related K20459 nukF; lantibiotic transport system ATP-binding protein D Dhaf_3871 conserved hypothetical protein K20460 nukE; lantibiotic transport system permease protein D Dhaf_3872 conserved hypothetical protein K20461 nukG; lantibiotic transport system permease protein D Dhaf_0213 membrane protein NosY K19341 nosY; Cu-processing system permease protein D Dhaf_0214 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein D Dhaf_0524 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein D Dhaf_0523 ABC transporter related K19083 braD; bacitracin transport system ATP-binding protein D Dhaf_2170 ABC transporter, permease component K25147 berB; beta-exotoxin I transport system permease protein D Dhaf_2171 ABC transporter related K25148 berA; beta-exotoxin I transport system ATP-binding protein D Dhaf_3297 putative ABC transporter K25149 narB; polyether ionophore transport system permease protein D Dhaf_3296 ABC transporter related K25150 narA; polyether ionophore transport system ATP-binding protein D Dhaf_2003 hypothetical protein K16905 K16905; fluoroquinolone transport system permease protein D Dhaf_2002 ABC-2 type transporter K16906 K16906; fluoroquinolone transport system permease protein D Dhaf_2001 ABC transporter related K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-] D Dhaf_1094 ABC transporter related K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Dhaf_4741 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Dhaf_4742 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Dhaf_2558 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_2497 ABC transporter EcsB K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_2921 membrane spanning protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_2116 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_0505 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_1684 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_1743 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_1958 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_3151 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_3318 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_3320 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_1654 ABC transporter, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_2277 transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_2247 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D Dhaf_2548 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_4732 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_2248 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_2276 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_2498 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_2557 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_0275 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_0504 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_1683 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_1742 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_1957 daunorubicin resistance ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_3150 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_3319 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_3948 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_2117 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_2922 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_3333 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_2664 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_0848 ABC-type multidrug transport system ATPase component-like protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Dhaf_4677 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_3803 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_3804 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_2149 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_2239 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_2454 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_1371 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_1372 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_1552 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_1694 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_1721 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_1761 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_3474 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_3722 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_1922 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_0200 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Dhaf_4676 Sigma 54 interacting domain protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_3802 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_1693 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_1720 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_1370 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_1760 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_2148 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_2453 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_1551 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_0492 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_3473 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_0201 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Dhaf_1868 sodium/sulphate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Dhaf_0193 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Dhaf_1821 sodium/sulphate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Dhaf_1824 sodium/sulphate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Dhaf_1872 sodium/sulphate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Dhaf_3735 sodium/sulphate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Dhaf_4598 sodium/sulphate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Dhaf_4599 sodium/sulphate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Dhaf_0170 sodium/sulphate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Dhaf_0808 sodium/sulphate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Dhaf_2909 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Dhaf_1652 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Dhaf_1842 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Dhaf_2651 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Dhaf_1582 multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump D Dhaf_1959 multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump D Dhaf_0466 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D Dhaf_0299 major facilitator superfamily MFS_1 K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D Dhaf_1856 major facilitator superfamily MFS_1 K05548 benK; MFS transporter, AAHS family, benzoate transport protein D Dhaf_1579 major facilitator superfamily MFS_1 K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D Dhaf_2462 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D Dhaf_2281 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Dhaf_1653 major facilitator superfamily MFS_1 K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump D Dhaf_0227 major facilitator superfamily MFS_1 K19578 bmr; MFS transporter, DHA1 family, multidrug resistance protein D Dhaf_1686 drug resistance transporter, EmrB/QacA subfamily K18934 lmrS; MFS transporter, DHA2 family, multidrug resistance protein D Dhaf_1114 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Dhaf_1381 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Dhaf_2526 H+ Antiporter protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Dhaf_0817 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D Dhaf_3786 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family D Dhaf_1898 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D Dhaf_1482 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D Dhaf_4638 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D Dhaf_1915 major intrinsic protein K02440 glpF; glycerol uptake facilitator D Dhaf_1061 ammonium transporter K03320 amt; ammonium transporter, Amt family D Dhaf_0554 formate/nitrite transporter K21993 fdhC; formate transporter D Dhaf_2389 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D Dhaf_0942 MscS Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein D Dhaf_4199 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Dhaf_4200 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Dhaf_3494 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Dhaf_3267 CrcB protein K06199 crcB; fluoride exporter D Dhaf_3268 CrcB protein K06199 crcB; fluoride exporter D Dhaf_0561 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Dhaf_0819 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Dhaf_3277 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Dhaf_4483 putative cell wall binding repeat 2-containing protein K21449 ata; trimeric autotransporter adhesin D Dhaf_1576 LrgA family protein K06518 cidA; holin-like protein D Dhaf_0844 spore germination protein K06296 gerKB; spore germination protein KB D Dhaf_3283 spore germination protein K06296 gerKB; spore germination protein KB D Dhaf_0058 spore germination protein K06296 gerKB; spore germination protein KB D Dhaf_2279 spore germination protein K06296 gerKB; spore germination protein KB D Dhaf_0664 spore germination protein K06311 yndE; spore germination protein D Dhaf_2670 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Dhaf_4410 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Dhaf_2083 small multidrug resistance protein K03297 emrE; small multidrug resistance pump D Dhaf_1073 small multidrug resistance protein K18924 ykkC; paired small multidrug resistance pump D Dhaf_1074 small multidrug resistance protein K18925 ykkD; paired small multidrug resistance pump D Dhaf_0186 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Dhaf_1615 protein of unknown function DUF6 transmembrane K15269 pecM; probable blue pigment (indigoidine) exporter D Dhaf_2317 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD D Dhaf_3039 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Dhaf_2952 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Dhaf_1184 protein of unknown function UPF0060 K09771 TC.SMR3; small multidrug resistance family-3 protein D Dhaf_3408 L-lactate transport K03303 lutP; lactate permease D Dhaf_0268 L-lactate permease K03303 lutP; lactate permease D Dhaf_2514 L-lactate permease family protein, putative K03303 lutP; lactate permease D Dhaf_3390 L-lactate transport K03303 lutP; lactate permease D Dhaf_3406 L-lactate transport K03303 lutP; lactate permease D Dhaf_1736 choline/carnitine/betaine transporter K05020 opuD; glycine betaine transporter D Dhaf_4319 choline/carnitine/betaine transporter K05020 opuD; glycine betaine transporter D Dhaf_4324 choline/carnitine/betaine transporter K05020 opuD; glycine betaine transporter D Dhaf_1731 BCCT transporter K05245 caiT; L-carnitine/gamma-butyrobetaine antiporter D Dhaf_4366 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter D Dhaf_1156 sodium/proline symporter K11928 putP; sodium/proline symporter D Dhaf_2655 sodium:dicarboxylate symporter K07862 sstT; serine/threonine transporter D Dhaf_3397 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D Dhaf_1725 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D Dhaf_2905 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Dhaf_2906 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Dhaf_1584 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Dhaf_2907 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Dhaf_1585 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Dhaf_2198 permease for cytosine/purines uracil thiamine allantoin K10974 codB; cytosine permease D Dhaf_3856 uracil-xanthine permease K02824 uraA; uracil permease D Dhaf_4073 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Dhaf_0914 benzoate transporter K05782 benE; benzoate membrane transport protein D Dhaf_2840 Chromate transporter K07240 chrA; chromate transporter D Dhaf_2841 Chromate transporter K07240 chrA; chromate transporter D Dhaf_1067 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP D Dhaf_1793 TRAP dicarboxylate transporter-DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP D Dhaf_1068 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D Dhaf_1794 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D Dhaf_1069 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Dhaf_1795 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Dhaf_4632 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Dhaf_4633 TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein D Dhaf_0368 TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein D Dhaf_0173 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter D Dhaf_4094 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter D Dhaf_1189 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Dhaf_1212 arsenical-resistance protein K03325 ACR3; arsenite transporter D Dhaf_1163 monovalent cation/H+ antiporter, subunit 1 K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D Dhaf_1162 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D Dhaf_1161 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Dhaf_1160 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Dhaf_1159 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Dhaf_1158 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Dhaf_1157 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Dhaf_2974 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B D Dhaf_4312 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Dhaf_0944 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Dhaf_3541 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Dhaf_3540 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Dhaf_0943 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Dhaf_1975 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Dhaf_0622 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Dhaf_4415 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Dhaf_2075 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Dhaf_2059 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Dhaf_0621 putative tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein D Dhaf_1974 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D Dhaf_2074 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D Dhaf_4414 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D Dhaf_1971 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Dhaf_2078 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Dhaf_4416 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Dhaf_2061 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Dhaf_3889 conserved hypothetical protein K23675 fmnP; riboflavin transporter D Dhaf_3218 protein of unknown function DUF165 K09125 yhhQ; queuosine precursor transporter D Dhaf_4064 stage V sporulation protein E K03588 ftsW; cell division protein FtsW D Dhaf_3384 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Dhaf_4830 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein D Dhaf_2300 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein D Dhaf_4713 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Dhaf_3508 acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Dhaf_2284 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Dhaf_1996 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Dhaf_1218 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Dhaf_4227 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D Dhaf_4231 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D Dhaf_0479 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D Dhaf_1629 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D Dhaf_1630 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit D Dhaf_0480 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit D Dhaf_4226 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit D Dhaf_4230 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit D Dhaf_1631 Polysulphide reductase NrfD K00185 dmsC; dimethyl sulfoxide reductase membrane subunit D Dhaf_0481 Polysulphide reductase NrfD K00185 dmsC; dimethyl sulfoxide reductase membrane subunit D Dhaf_4225 Polysulphide reductase NrfD K00185 dmsC; dimethyl sulfoxide reductase membrane subunit D Dhaf_1509 Formate dehydrogenase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D Dhaf_0536 pyrogallol hydroxytransferase K08358 ttrB; tetrathionate reductase subunit B D Dhaf_3233 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D Dhaf_3460 FeoA family protein K04758 feoA; ferrous iron transport protein A D Dhaf_3461 FeoA family protein K04758 feoA; ferrous iron transport protein A D Dhaf_3773 FeoA family protein K04758 feoA; ferrous iron transport protein A D Dhaf_3459 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Dhaf_0292 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Dhaf_3771 Ferrous iron transport B domain protein K04759 feoB; ferrous iron transport protein B D Dhaf_2643 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:dhd02044] D Dhaf_3525 hypothetical protein K02456 gspG; general secretion pathway protein G D Dhaf_3532 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Dhaf_3524 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Dhaf_3556 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Dhaf_3555 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Dhaf_3554 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Dhaf_3526 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Dhaf_3523 Fimbrial assembly family protein K02662 pilM; type IV pilus assembly protein PilM D Dhaf_3549 Tfp pilus assembly protein ATPase PilM-like protein K02662 pilM; type IV pilus assembly protein PilM D Dhaf_3548 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Dhaf_3527 twitching motility protein K02669 pilT; twitching motility protein PilT D Dhaf_4045 protein of unknown function YGGT K02221 yggT; YggT family protein D Dhaf_4318 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Dhaf_4824 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Dhaf_4317 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC D Dhaf_1135 beta-lactamase domain protein K02238 comEC; competence protein ComEC D Dhaf_4755 helicase domain protein K02240 comFA; competence protein ComFA D Dhaf_3069 putative ComF operon protein K02241 comFB; competence protein ComFB D Dhaf_0098 Geranylgeranyl pyrophosphate synthase-like protein K02251 comQ; competence protein ComQ D Dhaf_3184 Polyprenyl synthetase K02251 comQ; competence protein ComQ D Dhaf_4134 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Dhaf_4135 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Dhaf_3034 FlhB domain-containing protein K04061 flhB2; flagellar biosynthesis protein D Dhaf_4150 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Dhaf_4148 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Dhaf_4147 Peptidase C14, ICE, catalytic subunit p20, active site K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Dhaf_4142 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Dhaf_4139 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Dhaf_4138 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Dhaf_4136 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Dhaf_4747 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Dhaf_3618 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Dhaf_0404 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Dhaf_4714 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Dhaf_0442 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Dhaf_3761 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Dhaf_3767 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Dhaf_3621 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Dhaf_4959 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Dhaf_2560 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dhaf_3345 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dhaf_0231 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Dhaf_3363 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:dhd02042] D Dhaf_0561 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Dhaf_0819 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Dhaf_3277 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Dhaf_1188 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:dhd02022] D Dhaf_4049 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Dhaf_2159 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dhaf_4050 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dhaf_1237 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Dhaf_2147 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Dhaf_4625 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Dhaf_1586 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Dhaf_1164 UspA domain protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Dhaf_1587 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dhaf_4626 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Dhaf_3738 histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D Dhaf_3739 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD D Dhaf_1367 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD D Dhaf_0522 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D Dhaf_0521 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D Dhaf_1841 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D Dhaf_2158 histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Dhaf_1666 histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Dhaf_1665 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Dhaf_2230 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Dhaf_2231 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR D Dhaf_1006 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Dhaf_1005 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Dhaf_1866 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Dhaf_0041 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Dhaf_0940 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Dhaf_4693 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Dhaf_1284 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Dhaf_0286 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Dhaf_0099 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3] D Dhaf_2790 Sensor DegS domain protein K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Dhaf_1194 two component transcriptional regulator, LuxR family K07696 nreC; two-component system, NarL family, response regulator NreC D Dhaf_1230 two component transcriptional regulator, LuxR family K07696 nreC; two-component system, NarL family, response regulator NreC D Dhaf_3229 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D Dhaf_1253 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D Dhaf_0916 signal transduction histidine kinase, nitrogen specific, NtrB K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D Dhaf_4841 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D Dhaf_3481 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Dhaf_3021 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Dhaf_4645 signal transduction histidine kinase regulating citrate/malate metabolism K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3] D Dhaf_4644 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR D Dhaf_1239 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR D Dhaf_4311 signal transduction histidine kinase regulating citrate/malate metabolism K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3] D Dhaf_4310 response regulator receiver and unknown domain protein K11615 malR; two-component system, CitB family, response regulator MalR D Dhaf_1339 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Dhaf_2452 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Dhaf_4305 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Dhaf_0494 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Dhaf_3686 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D Dhaf_4408 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D Dhaf_1568 response regulator receiver and SARP domain protein K02477 K02477; two-component system, LytTR family, response regulator D Dhaf_1614 response regulator receiver and SARP domain protein K02477 K02477; two-component system, LytTR family, response regulator D Dhaf_0495 response regulator receiver and SARP domain protein K02477 K02477; two-component system, LytTR family, response regulator D Dhaf_0497 response regulator receiver and SARP domain protein K02477 K02477; two-component system, LytTR family, response regulator D Dhaf_3047 sigma54 specific transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D Dhaf_0198 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D Dhaf_4673 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Dhaf_0197 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Dhaf_4155 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Dhaf_4540 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Dhaf_4140 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Dhaf_4153 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Dhaf_4590 putative sensor with HAMP domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Dhaf_3979 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Dhaf_4320 transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Dhaf_4591 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Dhaf_4541 multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Dhaf_0995 response regulator receiver and ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR D Dhaf_1567 signal transduction histidine kinase, LytS K19694 chiS; two-component system, sensor histidine kinase ChiS D Dhaf_0411 signal transduction histidine kinase, LytS K19694 chiS; two-component system, sensor histidine kinase ChiS D Dhaf_0493 signal transduction histidine kinase, LytS K19694 chiS; two-component system, sensor histidine kinase ChiS C 02035 Bacterial motility proteins [BR:dhd02035] D Dhaf_4155 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Dhaf_4154 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Dhaf_4120 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Dhaf_1611 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Dhaf_2263 CheC domain protein K03409 cheX; chemotaxis protein CheX D Dhaf_4130 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Dhaf_4129 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Dhaf_4203 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Dhaf_4153 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Dhaf_4540 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Dhaf_4140 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Dhaf_2112 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4362 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0283 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1610 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0078 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0079 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0516 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_0624 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1111 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1328 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_1373 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_2082 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3478 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3311 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3774 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_3784 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4543 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4888 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Dhaf_4393 methyl-accepting chemotaxis sensory transducer K06595 hemAT; heam-based aerotactic trancducer D Dhaf_4148 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Dhaf_4147 Peptidase C14, ICE, catalytic subunit p20, active site K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Dhaf_4146 hypothetical protein K02413 fliJ; flagellar protein FliJ D Dhaf_4139 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Dhaf_4138 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Dhaf_4136 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Dhaf_4134 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Dhaf_4135 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Dhaf_4149 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Dhaf_4143 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Dhaf_4142 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN D Dhaf_4150 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Dhaf_4144 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Dhaf_4151 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Dhaf_4126 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Dhaf_4122 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Dhaf_4152 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Dhaf_4125 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Dhaf_4121 protein of unknown function DUF1078 domain protein K02391 flgF; flagellar basal-body rod protein FlgF D Dhaf_4123 protein of unknown function DUF1078 domain protein K02392 flgG; flagellar basal-body rod protein FlgG D Dhaf_4124 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE D Dhaf_4195 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Dhaf_4194 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Dhaf_4189 flagellin domain protein K02406 fliC; flagellin D Dhaf_4167 flagellin domain protein K02406 fliC; flagellin D Dhaf_4166 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2 D Dhaf_4165 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Dhaf_4127 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Dhaf_4199 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Dhaf_4200 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Dhaf_4192 protein of unknown function DUF180 K13626 fliW; flagellar assembly factor FliW D Dhaf_4197 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Dhaf_4190 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Dhaf_4161 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Dhaf_4145 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD D Dhaf_4133 GTP-binding signal recognition particle SRP54 G-domain protein K02404 flhF; flagellar biosynthesis protein FlhF D Dhaf_4132 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Dhaf_3527 twitching motility protein K02669 pilT; twitching motility protein PilT D Dhaf_3556 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Dhaf_3555 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Dhaf_3554 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Dhaf_3526 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Dhaf_3524 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Dhaf_3548 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Dhaf_3523 Fimbrial assembly family protein K02662 pilM; type IV pilus assembly protein PilM D Dhaf_3549 Tfp pilus assembly protein ATPase PilM-like protein K02662 pilM; type IV pilus assembly protein PilM C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:dhd04812] D Dhaf_2680 AMMECR1 domain protein K06990 MEMO1; MEMO1 family protein D Dhaf_4763 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Dhaf_4351 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Dhaf_3280 hypothetical protein K18640 parM; plasmid segregation protein ParM D Dhaf_4057 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dhaf_4347 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Dhaf_4346 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Dhaf_4345 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Dhaf_4954 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Dhaf_4953 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:dhd04147] D Dhaf_4715 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dhaf_2072 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Dhaf_2781 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dhaf_2637 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dhaf_2756 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Dhaf_4718 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Dhaf_2755 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Dhaf_3100 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Dhaf_3314 band 7 protein K07192 FLOT; flotillin D Dhaf_0815 band 7 protein K17080 PHB1; prohibitin 1 D Dhaf_1406 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0735 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0740 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0716 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_0719 chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Dhaf_4299 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Dhaf_3194 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Dhaf_3214 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Dhaf_0420 translation elongation factor Tu K02358 tuf; elongation factor Tu D Dhaf_4293 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Dhaf_3638 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dhaf_3455 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Dhaf_0602 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_0609 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2857 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3545 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_2694 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3645 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Dhaf_3048 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Dhaf_0443 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Dhaf_3610 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Dhaf_0796 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Dhaf_0795 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Dhaf_2960 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Dhaf_3200 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Dhaf_4681 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Dhaf_1327 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0994 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_0922 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Dhaf_3351 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Dhaf_0924 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Dhaf_4578 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Dhaf_1478 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Dhaf_4074 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Dhaf_2775 Electron transfer flavoprotein alpha/beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Dhaf_3647 Electron transfer flavoprotein alpha/beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Dhaf_4534 Electron transfer flavoprotein alpha/beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Dhaf_2861 Electron transfer flavoprotein alpha/beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Dhaf_4605 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Dhaf_1020 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Dhaf_0312 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Dhaf_4717 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Dhaf_2635 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:dhd02048] D Dhaf_3931 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Dhaf_2188 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Dhaf_2189 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Dhaf_3930 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Dhaf_2187 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Dhaf_3932 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Dhaf_3942 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Dhaf_3938 CRISPR-associated protein, CT1132 family K19115 csh2; CRISPR-associated protein Csh2 D Dhaf_3937 CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h D Dhaf_2185 CRISPR-associated protein TM1801 K19118 csd2; CRISPR-associated protein Csd2 D Dhaf_2183 CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d D Dhaf_3955 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Dhaf_3953 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Dhaf_3951 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Dhaf_3954 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Dhaf_0179 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Dhaf_0632 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Dhaf_1453 conserved hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D Dhaf_0593 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Dhaf_2436 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Dhaf_1348 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Dhaf_1347 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Dhaf_3697 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Dhaf_3874 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Dhaf_3186 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D Dhaf_3574 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D Dhaf_4250 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D Dhaf_2025 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J D Dhaf_3187 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J D Dhaf_3573 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J D Dhaf_2606 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J D Dhaf_3445 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J D Dhaf_0577 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J D Dhaf_2605 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-] D Dhaf_2026 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-] D Dhaf_2843 phage shock protein C, PspC K03973 pspC; phage shock protein C D Dhaf_1319 phage shock protein C, PspC K03973 pspC; phage shock protein C D Dhaf_1233 phage shock protein C, PspC K03973 pspC; phage shock protein C D Dhaf_1691 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4 D Dhaf_3446 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4 D Dhaf_3300 addiction module toxin, RelE/StbE family K19092 parE1_3_4; toxin ParE1/3/4 D Dhaf_3876 addiction module toxin, RelE/StbE family K19092 parE1_3_4; toxin ParE1/3/4 D Dhaf_4492 addiction module toxin, RelE/StbE family K19092 parE1_3_4; toxin ParE1/3/4 D Dhaf_0570 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4 D Dhaf_4002 filamentation induced by cAMP protein Fic K07341 doc; death on curing protein D Dhaf_3301 prevent-host-death family protein K19165 phd; antitoxin Phd D Dhaf_0323 cytotoxic translational repressor K07334 higB-1; toxin HigB-1 D Dhaf_4949 hypothetical protein K21498 higA-1; antitoxin HigA-1 D Dhaf_4057 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Dhaf_4763 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Dhaf_4351 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Dhaf_3581 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:dhd04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:dhd04090] C 01504 Antimicrobial resistance genes [BR:dhd01504] D Dhaf_2449 adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-] D Dhaf_2462 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D Dhaf_2220 small GTP-binding protein K18220 tetM; ribosomal protection tetracycline resistance protein D Dhaf_1085 ABC transporter related K18231 msr; macrolide transport system ATP-binding/permease protein D Dhaf_0018 ABC transporter related K18231 msr; macrolide transport system ATP-binding/permease protein D Dhaf_1114 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Dhaf_1381 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Dhaf_2526 H+ Antiporter protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D Dhaf_2233 Chloramphenicol O-acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D Dhaf_2876 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_3787 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_0731 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_1934 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_3222 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_2099 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Dhaf_3788 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_2877 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_1935 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_3223 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_2098 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_0730 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Dhaf_2158 histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Dhaf_3547 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Dhaf_1663 VanW family protein K18346 vanW; vancomycin resistance protein VanW D Dhaf_1773 VanW family protein K18346 vanW; vancomycin resistance protein VanW D Dhaf_1664 D-alanine/D-alanine ligase K15739 vanB; D-alanine---(R)-lactate ligase [EC:6.1.2.1] D Dhaf_1661 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Dhaf_1666 histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Dhaf_1665 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR D Dhaf_0165 D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D Dhaf_0166 membrane bound O-acyl transferase MBOAT family protein K03739 dltB; membrane protein involved in D-alanine export D Dhaf_0167 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D Dhaf_0168 DltD domain protein K03740 dltD; D-alanine transfer protein D Dhaf_3233 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dhd00537] D Dhaf_0924 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Dhaf_3100 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:dhd03100] D Dhaf_R0019 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0072 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0063 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Dhaf_R0088 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0002 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0053 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0069 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Dhaf_R0042 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Dhaf_R0057 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Dhaf_R0084 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Dhaf_R0012 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Dhaf_R0047 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Dhaf_R0032 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Dhaf_R0015 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Dhaf_R0035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dhaf_R0050 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Dhaf_R0030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dhaf_R0045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dhaf_R0092 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dhaf_R0082 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Dhaf_R0044 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0074 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0014 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0060 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Dhaf_R0087 tRNA-His K14226 tRNA-His; tRNA His D Dhaf_R0007 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Dhaf_R0062 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Dhaf_R0086 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0076 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Dhaf_R0036 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dhaf_R0093 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dhaf_R0051 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dhaf_R0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Dhaf_R0023 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0034 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0049 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0083 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0043 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0058 tRNA-Met K14230 tRNA-Met; tRNA Met D Dhaf_R0091 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Dhaf_R0013 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Dhaf_R0089 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dhaf_R0077 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dhaf_R0066 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Dhaf_R0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dhaf_R0041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dhaf_R0056 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dhaf_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dhaf_R0004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Dhaf_R0039 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dhaf_R0054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dhaf_R0025 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dhaf_R0024 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Dhaf_R0067 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Dhaf_R0022 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Dhaf_R0033 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Dhaf_R0048 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Dhaf_R0011 tRNA-Val K14237 tRNA-Val; tRNA Val D Dhaf_R0031 tRNA-Val K14237 tRNA-Val; tRNA Val D Dhaf_R0046 tRNA-Val K14237 tRNA-Val; tRNA Val D Dhaf_R0017 tRNA-Val K14237 tRNA-Val; tRNA Val D Dhaf_R0085 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Dhaf_R0006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0061 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0073 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0080 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Dhaf_R0079 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0064 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0071 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Dhaf_R0021 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0078 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0065 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0070 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Dhaf_R0005 ffs; SRP RNA; RNA component of signal recognitionparti cle K01983 ffs; SRP RNA D Dhaf_R0081 RNA component of RNaseP K01978 rnpB; M1 RNA D Dhaf_R0090 tmRNA as predicted by Rfam (RF00023), score 192.93 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Dhaf_3146 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07469 mop; aldehyde oxidoreductase [EC:1.2.99.7] D Dhaf_2865 acyl-CoA dehydrogenase domain protein K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D Dhaf_1555 Saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D Dhaf_2774 Electron-transferring-flavoprotein dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D Dhaf_1027 FAD dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D Dhaf_4604 Electron-transferring-flavoprotein dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D Dhaf_0313 Electron-transferring-flavoprotein dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D Dhaf_2646 methionine-R-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Dhaf_4592 methionine-R-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Dhaf_1329 Catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D Dhaf_0476 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Dhaf_4026 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Dhaf_2260 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2] D Dhaf_3502 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Dhaf_1210 arsenate reductase (thioredoxin) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Dhaf_3141 Radical SAM domain protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D Dhaf_1889 Radical SAM domain protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D Dhaf_0350 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D Dhaf_2681 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dhaf_1247 glycyl-radical enzyme activating protein family K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Dhaf_4904 glycyl-radical enzyme activating protein family K20037 cutD; choline trimethylamine-lyase activating enzyme [EC:1.97.1.-] D Dhaf_4288 NADH dehydrogenase (quinone) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D Dhaf_4286 conserved hypothetical protein K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D Dhaf_4285 NADH dehydrogenase (quinone) K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D Dhaf_0966 transcriptional regulator, XRE family K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D Dhaf_3242 putative RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D Dhaf_0906 cobalamin B12-binding domain protein K22704 hpnR; hopanoid C-3 methylase [EC:2.1.1.-] D Dhaf_2363 Prolyl aminopeptidase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D Dhaf_1571 N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D Dhaf_3046 GCN5-related N-acetyltransferase K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-] D Dhaf_3022 GCN5-related N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D Dhaf_2229 modD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-] D Dhaf_2912 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D Dhaf_1554 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Dhaf_1499 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Dhaf_1504 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Dhaf_3837 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Dhaf_4252 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Dhaf_2831 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Dhaf_0832 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Dhaf_1622 pyruvate phosphate dikinase PEP/pyruvate-binding K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D Dhaf_1117 pyruvate phosphate dikinase PEP/pyruvate-binding K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D Dhaf_3294 pyruvate phosphate dikinase PEP/pyruvate-binding K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D Dhaf_4241 PEP-utilising protein mobile region K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D Dhaf_3441 anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D Dhaf_0388 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D Dhaf_3734 Arylsulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22] D Dhaf_0171 Arylsulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22] D Dhaf_1026 L-carnitine dehydratase/bile acid-inducible protein F K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21] D Dhaf_4597 L-carnitine dehydratase/bile acid-inducible protein F K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21] D Dhaf_4607 L-carnitine dehydratase/bile acid-inducible protein F K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21] D Dhaf_1018 L-carnitine dehydratase/bile acid-inducible protein F K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21] D Dhaf_0307 L-carnitine dehydratase/bile acid-inducible protein F K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21] D Dhaf_0610 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D Dhaf_3066 thioesterase superfamily protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D Dhaf_2748 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Dhaf_0143 protein serine/threonine phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D Dhaf_3099 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Dhaf_3538 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-] D Dhaf_2108 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Dhaf_4279 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Dhaf_0068 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Dhaf_0073 primase/topoisomerase like protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D Dhaf_2966 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_4820 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_0822 N-acetylmuramoyl-L-alanine amidase family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Dhaf_2958 N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D Dhaf_3853 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Dhaf_1185 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Dhaf_3012 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Dhaf_4727 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Dhaf_2463 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Dhaf_1323 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Dhaf_2962 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Dhaf_2542 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25] D Dhaf_0737 reductive dehalogenase K21566 cprA; 3-chloro-4-hydroxyphenylacetate reductive dehalogenase [EC:3.8.1.-] D Dhaf_4829 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D Dhaf_3628 conserved hypothetical protein K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D Dhaf_1341 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Dhaf_1343 ferripyochelin binding protein (fbp) K01726 GAMMACA; gamma-carbonic anhydrase [EC:4.2.1.-] D Dhaf_3343 conserved hypothetical protein K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130] D Dhaf_2963 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D Dhaf_4905 Formate C-acetyltransferase K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4] D Dhaf_1385 ExsB family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Dhaf_3339 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Dhaf_1337 lysine 2,3-aminomutase YodO family protein K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9] D Dhaf_3452 CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D Dhaf_4398 CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D Dhaf_1099 CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D Dhaf_0085 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D Dhaf_0935 Mur ligase middle domain protein K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-] D Dhaf_2380 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Dhaf_3915 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Dhaf_0927 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D Dhaf_1036 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D Dhaf_4941 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB D Dhaf_3259 protein of unknown function DUF224 cysteine-rich region domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D Dhaf_3260 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D Dhaf_3261 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG D Dhaf_3084 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG D Dhaf_2910 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D Dhaf_1033 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D Dhaf_3023 ferredoxin K05337 fer; ferredoxin D Dhaf_2566 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 fer; ferredoxin D Dhaf_3580 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D Dhaf_1187 beta-lactamase domain protein K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D Dhaf_1054 Dinitrogenase iron-molybdenum cofactor biosynthesis protein K02596 nifX; nitrogen fixation protein NifX D Dhaf_1058 Dinitrogenase iron-molybdenum cofactor biosynthesis protein K02596 nifX; nitrogen fixation protein NifX D Dhaf_1360 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB D Dhaf_1056 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB D Dhaf_1053 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN D Dhaf_1052 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D Dhaf_1816 oxidoreductase/nitrogenase component 1 K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D Dhaf_1817 oxidoreductase/nitrogenase component 1 K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D Dhaf_0741 flavodoxin K03839 fldA; flavodoxin I D Dhaf_1287 4Fe-4S ferredoxin iron-sulfur binding domain protein K02573 napG; ferredoxin-type protein NapG D Dhaf_1290 4Fe-4S ferredoxin iron-sulfur binding domain protein K02574 napH; ferredoxin-type protein NapH D Dhaf_2776 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Dhaf_3648 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Dhaf_4535 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Dhaf_2862 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Dhaf_1019 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Dhaf_4606 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Dhaf_0311 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Dhaf_2773 4Fe-4S ferredoxin iron-sulfur binding domain protein K03855 fixX; ferredoxin like protein D Dhaf_4603 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03855 fixX; ferredoxin like protein D Dhaf_0314 putative ferredoxin K03855 fixX; ferredoxin like protein D Dhaf_1028 putative ferredoxin K03855 fixX; ferredoxin like protein D Dhaf_0261 sulfur relay protein, TusE/DsrC/DsvC family K23077 dsrC; dissimilatory sulfite reductase related protein C 99983 Lipid metabolism D Dhaf_2801 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Dhaf_2385 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Dhaf_2816 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Dhaf_2746 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Dhaf_0363 ethanolamine utilization protein EutJ family protein K04024 eutJ; ethanolamine utilization protein EutJ D Dhaf_4899 ethanolamine utilization protein EutJ family protein K04024 eutJ; ethanolamine utilization protein EutJ D Dhaf_4864 microcompartments protein K04026 eutL; ethanolamine utilization protein EutL D Dhaf_4901 conserved hypothetical protein K04029 eutP; ethanolamine utilization protein EutP D Dhaf_4865 ethanolamine utilization protein, EutP K04029 eutP; ethanolamine utilization protein EutP D Dhaf_0359 ethanolamine utilisation EutQ family protein K04030 eutQ; ethanolamine utilization protein EutQ D Dhaf_4894 protein of unknown function DUF861 cupin_3 K04030 eutQ; ethanolamine utilization protein EutQ D Dhaf_4902 microcompartments protein K04031 eutS; ethanolamine utilization protein EutS D Dhaf_4047 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Dhaf_4434 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A C 99987 Cofactor metabolism D Dhaf_3247 ABC-1 domain protein K03688 ubiB; ubiquinone biosynthesis protein D Dhaf_4097 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D Dhaf_4896 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K27271 pduS; cobalamin reductase D Dhaf_0361 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K27271 pduS; cobalamin reductase C 99988 Secondary metabolism D Dhaf_2303 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D Dhaf_2048 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Dhaf_4749 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Dhaf_1047 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1 D Dhaf_1048 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2 D Dhaf_1388 RNA binding S1 domain protein K06959 tex; protein Tex D Dhaf_3895 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A D Dhaf_0004 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation D Dhaf_0142 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein D Dhaf_2788 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Dhaf_0387 UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator D Dhaf_4378 trigger factor K03545 tig; trigger factor D Dhaf_0732 trigger factor domain protein K03545 tig; trigger factor D Dhaf_1894 trigger factor K03545 tig; trigger factor D Dhaf_0699 trigger factor domain protein K03545 tig; trigger factor D Dhaf_0724 trigger factor domain protein K03545 tig; trigger factor D Dhaf_4268 putative formate dehydrogenase formation protein FdhE K02380 fdhE; FdhE protein D Dhaf_4712 SsrA-binding protein K03664 smpB; SsrA-binding protein D Dhaf_3635 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Dhaf_3634 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Dhaf_3633 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Dhaf_3636 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Dhaf_3733 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Dhaf_2780 OsmC family protein K07397 yhfA; putative redox protein D Dhaf_3358 ResB family protein K07399 resB; cytochrome c biogenesis protein D Dhaf_3138 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor D Dhaf_4102 Negative regulator of genetic competence K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D Dhaf_4686 methylated-DNA/protein-cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D Dhaf_0638 protein of unknown function DUF1156 K07445 K07445; putative DNA methylase D Dhaf_2944 ribonuclease H-related protein K06993 K06993; ribonuclease H-related protein D Dhaf_4352 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Dhaf_3231 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC D Dhaf_0640 ATP-dependent endonuclease of the OLD family-like protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D Dhaf_4449 ATP-dependent endonuclease of the OLD family-like protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D Dhaf_3740 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Dhaf_3055 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D Dhaf_3718 DNA protecting protein DprA K04096 smf; DNA processing protein D Dhaf_0674 conserved hypothetical protein K04096 smf; DNA processing protein D Dhaf_2786 primosome, DnaD subunit K02086 dnaD; DNA replication protein D Dhaf_2949 TOPRIM domain protein K07476 yusF; toprim domain protein D Dhaf_3583 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Dhaf_4186 conserved hypothetical protein K07481 K07481; transposase, IS5 family D Dhaf_4092 transposase K07483 K07483; transposase D Dhaf_4452 transposase IS3/IS911 family protein K07483 K07483; transposase D Dhaf_2919 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Dhaf_3315 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Dhaf_4661 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Dhaf_0814 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Dhaf_0488 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Dhaf_0963 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Dhaf_2011 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Dhaf_3832 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Dhaf_4538 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase D Dhaf_0520 transposase, IS605 OrfB family K07496 K07496; putative transposase D Dhaf_2012 transposase, IS605 OrfB family K07496 K07496; putative transposase D Dhaf_3173 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Dhaf_3934 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Dhaf_0953 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Dhaf_1444 transposase IS3/IS911 family protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Dhaf_3317 phage shock protein A, PspA K03969 pspA; phage shock protein A D Dhaf_3075 phage shock protein A, PspA K03969 pspA; phage shock protein A D Dhaf_4614 Rhodanese domain protein K03972 pspE; phage shock protein E D Dhaf_0051 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Dhaf_2372 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Dhaf_2459 amino acid permease-associated region K03293 TC.AAT; amino acid transporter, AAT family D Dhaf_1325 amino acid permease-associated region K03293 TC.AAT; amino acid transporter, AAT family D Dhaf_2592 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Dhaf_4520 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Dhaf_4909 choline/carnitine/betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D Dhaf_4358 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Dhaf_1525 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Dhaf_1927 conserved hypothetical protein K03307 TC.SSS; solute:Na+ symporter, SSS family D Dhaf_4884 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Dhaf_2270 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D Dhaf_2959 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D Dhaf_1176 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D Dhaf_2794 Cobyrinic acid ac-diamide synthase K07321 cooC; CO dehydrogenase maturation factor D Dhaf_2799 Cobyrinic acid ac-diamide synthase K07321 cooC; CO dehydrogenase maturation factor D Dhaf_3793 Cobyrinic acid ac-diamide synthase K07321 cooC; CO dehydrogenase maturation factor D Dhaf_1096 Cobyrinic acid ac-diamide synthase K07321 cooC; CO dehydrogenase maturation factor D Dhaf_1168 protein of unknown function DUF542 ScdA domain protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D Dhaf_0053 sigmaK-factor processing regulatory BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery D Dhaf_4958 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein D Dhaf_2950 Exonuclease RNase T and DNA polymerase III K06348 kapD; sporulation inhibitor KapD D Dhaf_3415 nucleoside recognition domain protein K06373 spmA; spore maturation protein A D Dhaf_3414 nucleoside recognition domain protein K06374 spmB; spore maturation protein B D Dhaf_3440 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Dhaf_3462 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M D Dhaf_4313 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D Dhaf_4409 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R D Dhaf_3516 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA D Dhaf_3515 transcriptional regulator, fis family K06391 spoIIIAB; stage III sporulation protein AB D Dhaf_3514 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D Dhaf_3513 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD D Dhaf_3512 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE D Dhaf_3511 hypothetical protein K06395 spoIIIAF; stage III sporulation protein AF D Dhaf_3510 stage III sporulation protein AG, putative K06396 spoIIIAG; stage III sporulation protein AG D Dhaf_3509 hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH D Dhaf_3378 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D Dhaf_2438 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Dhaf_2440 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase D Dhaf_3439 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D Dhaf_3438 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D Dhaf_3437 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D Dhaf_3436 GerA spore germination protein K06408 spoVAF; stage V sporulation protein AF D Dhaf_3662 dipicolinic acid synthetase, A subunit K06410 spoVFA; dipicolinate synthase subunit A D Dhaf_3661 dipicolinic acid synthetase, B subunit K06411 spoVFB; dipicolinate synthase subunit B D Dhaf_0090 SpoVG family protein K06412 spoVG; stage V sporulation protein G D Dhaf_2725 AAA ATPase central domain protein K06413 spoVK; stage V sporulation protein K D Dhaf_3004 SpoVR family protein K06415 spoVR; stage V sporulation protein R D Dhaf_3101 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D Dhaf_3256 small acid-soluble spore protein alpha/beta type K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP) D Dhaf_3637 small acid-soluble spore protein alpha/beta type K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP) D Dhaf_3724 small acid-soluble spore protein (minor alpha/beta-type SASP) K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP) D Dhaf_2977 small acid-soluble spore protein alpha/beta type K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP) D Dhaf_0082 sporulation peptidase YabG K06436 yabG; spore coat assemly protein D Dhaf_4281 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein D Dhaf_3282 GerA spore germination protein K06295 gerKA; spore germination protein KA D Dhaf_2278 GerA spore germination protein K06295 gerKA; spore germination protein KA D Dhaf_0057 GerA spore germination protein K06295 gerKA; spore germination protein KA D Dhaf_0846 GerA spore germination protein K06295 gerKA; spore germination protein KA D Dhaf_0662 GerA spore germination protein K06295 gerKA; spore germination protein KA D Dhaf_0845 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Dhaf_2280 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Dhaf_3281 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Dhaf_0663 hypothetical protein K06297 gerKC; spore germination protein KC D Dhaf_0059 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC D Dhaf_4218 spore germination protein-like protein K06298 gerM; germination protein M D Dhaf_4407 hypothetical protein K06298 gerM; germination protein M D Dhaf_4848 Propeptide PepSY amd peptidase M4 K06313 ypeB; spore germination protein C 99993 Cell motility C 99995 Signaling proteins D Dhaf_2726 GTP-binding protein TypA K06207 typA; GTP-binding protein D Dhaf_1126 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D Dhaf_4280 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Dhaf_3602 PhoH family protein K07175 phoH2; PhoH-like ATPase D Dhaf_3006 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase D Dhaf_3127 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D Dhaf_0936 conserved hypothetical protein K22116 capC; gamma-polyglutamate biosynthesis protein CapC D Dhaf_2115 secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein D Dhaf_2455 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Dhaf_1719 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Dhaf_1550 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Dhaf_2162 RND family efflux transporter MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Dhaf_1759 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Dhaf_1669 RND family efflux transporter MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Dhaf_4678 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Dhaf_3128 transcriptional regulator, XRE family K15539 rodZ; cytoskeleton protein RodZ D Dhaf_0736 hypothetical protein K21565 cprB; membrane ancheor protein D Dhaf_4895 microcompartments protein K27272 pduT; bacterial microcompartment shell protein D Dhaf_0360 microcompartments protein K27272 pduT; bacterial microcompartment shell protein C 99994 Others D Dhaf_1238 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Dhaf_0183 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Dhaf_2262 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Dhaf_0211 periplasmic copper-binding K07218 nosD; nitrous oxidase accessory protein D Dhaf_4561 DNA binding domain protein, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein D Dhaf_0212 hypothetical protein K19342 nosL; copper chaperone NosL D Dhaf_4509 protein of unknown function DUF1648 K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D Dhaf_2450 GCN5-related N-acetyltransferase K02348 elaA; ElaA protein D Dhaf_2956 transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein D Dhaf_3827 Patatin K07001 K07001; NTE family protein D Dhaf_2955 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D Dhaf_3596 3-demethylubiquinone-9 3-methyltransferase K04750 phnB; PhnB protein D Dhaf_1590 3-demethylubiquinone-9 3-methyltransferase K04750 phnB; PhnB protein D Dhaf_4631 protein of unknown function DUF336 K11477 glcG; glc operon protein GlcG D Dhaf_0874 LemA family protein K03744 lemA; LemA protein D Dhaf_2430 LemA family protein K03744 lemA; LemA protein D Dhaf_2577 protein of unknown function DUF218 K03748 sanA; SanA protein D Dhaf_1150 SNARE associated Golgi protein K03975 dedA; membrane-associated protein D Dhaf_4314 membrane protein of unknown function K08972 K08972; putative membrane protein D Dhaf_2667 conserved hypothetical protein K08984 yjdF; putative membrane protein D Dhaf_0048 Protein of unknown function DUF1980 K08986 ycgQ; putative membrane protein C 99997 Function unknown D Dhaf_4919 Radical SAM domain protein K06871 K06871; uncharacterized protein D Dhaf_0109 Radical SAM domain protein K06871 K06871; uncharacterized protein D Dhaf_4244 Radical SAM domain protein K06871 K06871; uncharacterized protein D Dhaf_0875 protein of unknown function DUF477 K06872 K06872; uncharacterized protein D Dhaf_3077 protein of unknown function DUF477 K06872 K06872; uncharacterized protein D Dhaf_4439 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein D Dhaf_3335 protein of unknown function DUF255 K06888 K06888; uncharacterized protein D Dhaf_1620 conserved hypothetical protein K06889 K06889; uncharacterized protein D Dhaf_2579 conserved hypothetical protein K06889 K06889; uncharacterized protein D Dhaf_4501 ATPase K06921 K06921; uncharacterized protein D Dhaf_3284 protein of unknown function DUF815 K06923 K06923; uncharacterized protein D Dhaf_4680 conserved hypothetical protein K06926 K06926; uncharacterized protein D Dhaf_2600 CoA-binding domain protein K06929 K06929; uncharacterized protein D Dhaf_3444 CoA-binding protein-like protein K06929 K06929; uncharacterized protein D Dhaf_1981 protein of unknown function DUF134 K06933 K06933; uncharacterized protein D Dhaf_3045 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Dhaf_2464 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Dhaf_2008 HD family hydrolase K06950 K06950; uncharacterized protein D Dhaf_2787 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Dhaf_0150 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Dhaf_3759 conserved hypothetical protein K06960 K06960; uncharacterized protein D Dhaf_1739 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07005 K07005; uncharacterized protein D Dhaf_2326 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07005 K07005; uncharacterized protein D Dhaf_2859 conserved hypothetical protein K07034 K07034; uncharacterized protein D Dhaf_0364 amidohydrolase 2 K07045 K07045; uncharacterized protein D Dhaf_1832 amidohydrolase 2 K07045 K07045; uncharacterized protein D Dhaf_1261 domain of unknown function DUF1731 K07071 K07071; uncharacterized protein D Dhaf_1803 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein D Dhaf_2315 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein D Dhaf_3941 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein D Dhaf_2587 aldo/keto reductase K07079 K07079; uncharacterized protein D Dhaf_3563 aldo/keto reductase K07079 K07079; uncharacterized protein D Dhaf_0619 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Dhaf_1223 permease K07089 K07089; uncharacterized protein D Dhaf_0047 permease K07089 K07089; uncharacterized protein D Dhaf_1689 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Dhaf_0238 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Dhaf_3059 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Dhaf_4878 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Dhaf_3156 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Dhaf_3160 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Dhaf_0354 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Dhaf_3036 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Dhaf_1255 metallophosphoesterase K07098 K07098; uncharacterized protein D Dhaf_3376 metallophosphoesterase K07098 K07098; uncharacterized protein D Dhaf_2080 membrane protein AbrB duplication K07120 K07120; uncharacterized protein D Dhaf_1964 membrane protein AbrB duplication K07120 K07120; uncharacterized protein D Dhaf_2925 Radical SAM domain protein K07129 K07129; uncharacterized protein D Dhaf_4450 conserved hypothetical protein K07133 K07133; uncharacterized protein D Dhaf_4768 conserved hypothetical protein K07133 K07133; uncharacterized protein D Dhaf_4874 ATPase K07133 K07133; uncharacterized protein D Dhaf_0055 ATPase K07133 K07133; uncharacterized protein D Dhaf_4738 putative GTP-binding protein K07133 K07133; uncharacterized protein D Dhaf_3692 conserved hypothetical protein K07133 K07133; uncharacterized protein D Dhaf_0125 putative ATPase K07133 K07133; uncharacterized protein D Dhaf_4096 conserved hypothetical protein K07133 K07133; uncharacterized protein D Dhaf_0124 putative GTP-binding protein K07133 K07133; uncharacterized protein D Dhaf_1155 conserved hypothetical protein K07137 K07137; uncharacterized protein D Dhaf_0834 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D Dhaf_4103 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 K07138; uncharacterized protein D Dhaf_1335 conserved hypothetical protein K07139 K07139; uncharacterized protein D Dhaf_1382 protein of unknown function DUF161 K07149 K07149; uncharacterized protein D Dhaf_2145 protein of unknown function DUF554 K07150 K07150; uncharacterized protein D Dhaf_4952 protein of unknown function DUF554 K07150 K07150; uncharacterized protein D Dhaf_0559 VWA containing CoxE family protein K07161 K07161; uncharacterized protein D Dhaf_4081 VWA containing CoxE family protein K07161 K07161; uncharacterized protein D Dhaf_2760 VWA containing CoxE family protein K07161 K07161; uncharacterized protein D Dhaf_4291 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D Dhaf_2777 protein of unknown function UPF0182 K09118 K09118; uncharacterized protein D Dhaf_2904 protein of unknown function DUF401 K09133 K09133; uncharacterized protein D Dhaf_4260 protein of unknown function DUF364 K09138 K09138; uncharacterized protein D Dhaf_2669 protein of unknown function DUF438 K09155 K09155; uncharacterized protein D Dhaf_1127 protein of unknown function DUF711 K09157 K09157; uncharacterized protein D Dhaf_3619 metal dependent phosphohydrolase K09163 K09163; uncharacterized protein D Dhaf_4438 conserved hypothetical protein K09388 K09388; uncharacterized protein D Dhaf_2201 protein of unknown function DUF917 K09703 K09703; uncharacterized protein D Dhaf_2687 amino acid-binding ACT domain protein K09707 K09707; uncharacterized protein D Dhaf_4099 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Dhaf_3215 protein of unknown function DUF188 K09768 K09768; uncharacterized protein D Dhaf_4202 protein of unknown function DUF327 K09770 K09770; uncharacterized protein D Dhaf_3490 acid phosphatase/vanadium-dependent haloperoxidase related K09775 K09775; uncharacterized protein D Dhaf_3603 protein of unknown function DUF458 K09776 K09776; uncharacterized protein D Dhaf_1746 YCII-related K09780 K09780; uncharacterized protein D Dhaf_3005 sporulation protein YhbH K09786 K09786; uncharacterized protein D Dhaf_3762 putative helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein D Dhaf_2936 protein of unknown function DUF454 K09790 K09790; uncharacterized protein D Dhaf_1558 protein of unknown function DUF454 K09790 K09790; uncharacterized protein D Dhaf_2530 protein of unknown function DUF456 K09793 K09793; uncharacterized protein D Dhaf_2903 RNA binding S1 domain protein K00243 K00243; uncharacterized protein D Dhaf_0239 protein of unknown function DUF328 K09861 K09861; uncharacterized protein D Dhaf_3859 conserved hypothetical protein K09931 K09931; uncharacterized protein D Dhaf_2589 protein of unknown function DUF1287 K09974 K09974; uncharacterized protein D Dhaf_1364 conserved hypothetical protein K09981 K09981; uncharacterized protein D Dhaf_0800 conserved hypothetical protein K05967 K05967; uncharacterized protein D Dhaf_2382 conserved hypothetical protein K01163 K01163; uncharacterized protein D Dhaf_4337 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein D Dhaf_4359 protein of unknown function DUF47 K07220 K07220; uncharacterized protein D Dhaf_3678 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 13, 2024