+E Transcription factors KO
#
Transcription Factors - Escherichia coli K-12 DH10B
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D ECDH10B_2103 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D ECDH10B_4096 rhaR; DNA-binding transcriptional activator, L-rhamnose-binding K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D ECDH10B_4095 rhaS; DNA-binding transcriptional activator, L-rhamnose-binding K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D ECDH10B_1873 chbR; DNA-binding transcriptional dual regulator K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D ECDH10B_2602 yfeG; predicted DNA-binding transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D ECDH10B_0522 appY; DLP12 prophage; DNA-binding transcriptional activator K07780 appY; AraC family transcriptional regulator, transcriptional regulator required for anaerobic and stationary phase induction of genes
D ECDH10B_0630 appY; DLP12 prophage; DNA-binding transcriptional activator K07780 appY; AraC family transcriptional regulator, transcriptional regulator required for anaerobic and stationary phase induction of genes
D ECDH10B_0524 envY; DNA-binding transcriptional activator of porin biosynthesis K11920 envY; AraC family transcriptional regulator
D ECDH10B_0632 envY; DNA-binding transcriptional activator of porin biosynthesis K11920 envY; AraC family transcriptional regulator
D ECDH10B_4251 soxS; DNA-binding transcriptional dual regulator K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D ECDH10B_1662 marA; DNA-binding transcriptional dual activator of multiple antibiotic resistance K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D ECDH10B_4554 rob; DNA-binding transcriptional activator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D ECDH10B_1509 feaR; DNA-binding transcriptional dual regulator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D ECDH10B_0293 ykgD; predicted DNA-binding transcriptional regulator K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D ECDH10B_3691 gadW; DNA-binding transcriptional activator K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D ECDH10B_3693 gadX; DNA-binding transcriptional dual regulator K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D ECDH10B_4310 melR; DNA-binding transcriptional dual regulator K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D ECDH10B_1928 yeaM; predicted DNA-binding transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D ECDH10B_2370 ada; fused DNA-binding transcriptional dual regulator; O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D ECDH10B_2977 gcvA; DNA-binding transcriptional dual regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D ECDH10B_0239 perR; CP4-6 prophage; predicted DNA-binding transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D ECDH10B_3962 ilvY; DNA-binding transcriptional dual regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D ECDH10B_4019 metR; DNA-binding transcriptional activator, homocysteine-binding K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D ECDH10B_0021 nhaR; DNA-binding transcriptional activator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D ECDH10B_4150 oxyR; DNA-binding transcriptional dual regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D ECDH10B_3091 argP; DNA-binding transcriptional activator, replication initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D ECDH10B_2704 hcaR; DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator
D ECDH10B_3292 tdcA; DNA-binding transcriptional activator K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D ECDH10B_0460 allS; DNA-binding transcriptional activator of the allD operon K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D ECDH10B_1390 cysB; DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D ECDH10B_2131 cbl; DNA-binding transcriptional activator of cysteine biosynthesis K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D ECDH10B_2529 dsdC; DNA-binding transcriptional dual regulator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D ECDH10B_1459 abgR; predicted DNA-binding transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D ECDH10B_1937 yeaT; predicted DNA-binding transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D ECDH10B_2132 nac; DNA-binding transcriptional dual regulator of nitrogen assimilation K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D ECDH10B_3420 aaeR; predicted DNA-binding transcriptional regulator, efflux system K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D ECDH10B_3235 ygiP; predicted DNA-binding transcriptional regulator K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon
D ECDH10B_3951 hdfR; DNA-binding transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D ECDH10B_1448 ycjZ; predicted DNA-binding transcriptional regulator K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling
C DeoR family
D ECDH10B_0909 deoR; DNA-binding transcriptional repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D ECDH10B_3597 glpR; DNA-binding transcriptional repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D ECDH10B_3304 agaR; DNA-binding transcriptional dual regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D ECDH10B_2974 fucR; DNA-binding transcriptional activator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D ECDH10B_2875 srlR; DNA-bindng transcriptional repressor K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D ECDH10B_4386 ulaR; DNA-binding transcriptional dual regulator K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D ECDH10B_4074 yihW; predicted DNA-binding transcriptional regulator K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
C LacI family
D ECDH10B_1357 lacI; DNA-binding transcriptional repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D ECDH10B_3750 xylR; DNA-binding transcriptional activator, xylose-binding K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECDH10B_2308 galS; DNA-binding transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECDH10B_3009 galR; DNA-binding transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ECDH10B_4123 cytR; DNA-binding transcriptional dual regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D ECDH10B_4436 treR; DNA-binding transcriptional repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D ECDH10B_2882 ascG; DNA-binding transcriptional repressor K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D ECDH10B_3611 gntR; DNA-binding transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D ECDH10B_4457 idnR; DNA-binding transcriptional repressor, 5-gluconate-binding K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D ECDH10B_3250 ebgR; DNA-binding transcriptional repressor K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D ECDH10B_1753 malI; DNA-binding transcriptional repressor K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D ECDH10B_3870 yidP; predicted DNA-binding transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D ECDH10B_4293 phnF; predicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D ECDH10B_3550 frlR; predicted DNA-binding transcriptional regulator K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D ECDH10B_0796 mngR; DNA-binding transcriptional dual regulator, fatty-acyl-binding K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D ECDH10B_1240 fadR; DNA-binding transcriptional dual regulator of fatty acid metabolism K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D ECDH10B_0093 pdhR; DNA-binding transcriptional dual regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D ECDH10B_3157 glcC; DNA-binding transcriptional dual regulator, glycolate-binding K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D ECDH10B_3270 exuR; DNA-binding transcriptional repressor K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D ECDH10B_3786 lldR; DNA-binding transcriptional repressor K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D ECDH10B_3881 dgoR; predicted DNA-binding transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D ECDH10B_3403 nanR; DNA-binding transcriptional dual regulator K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D ECDH10B_1580 yncC; predicted DNA-binding transcriptional regulator K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D ECDH10B_2831 csiR; DNA-binding transcriptional dual regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D ECDH10B_1671 ydfH; predicted DNA-binding transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
C TetR/AcrR family
D ECDH10B_0300 betI; DNA-binding transcriptional repressor K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D ECDH10B_0420 acrR; DNA-binding transcriptional repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D ECDH10B_3823 ttk; division inhibitor K05501 slmA; TetR/AcrR family transcriptional regulator
D ECDH10B_1085 rutR; rut operon repressor K09017 rutR; TetR/AcrR family transcriptional regulator
D ECDH10B_1783 ydhM; predicted DNA-binding transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D ECDH10B_1751 uidR; DNA-binding transcriptional repressor K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D ECDH10B_3439 envR; DNA-binding transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D ECDH10B_4444 yjgJ; predicted transcriptional regulator K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D ECDH10B_1183 ycfQ; predicted DNA-binding transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D ECDH10B_4152 fabR; DNA-binding transcriptional repressor K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D ECDH10B_0864 ybiH; predicted DNA-binding transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D ECDH10B_0915 ybjK; predicted DNA-binding transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D ECDH10B_3931 asnC; DNA-binding transcriptional dual regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D ECDH10B_0959 lrp; DNA-binding transcriptional dual regulator, leucine-binding K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D ECDH10B_0403 ybaO; predicted DNA-binding transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D ECDH10B_2057 sdiA; DNA-binding transcriptional activator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D ECDH10B_0282 matA; predicted regulator K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D ECDH10B_2093 rcsA; DNA-binding transcriptional activator, co-regulator with RcsB K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D ECDH10B_1112 csgD; DNA-binding transcriptional regulator of adhesion determinants K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D ECDH10B_3683 yhiF; predicted DNA-binding ranscriptional regulator K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator
D ECDH10B_4522 bglJ; DNA-binding transcriptional activator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D ECDH10B_3593 malT; fused conserved protein; DNA-binding transcriptional activator, maltotriose-ATP-binding K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D ECDH10B_3688 gadE; acid-induced positive regulator of glutamate-dependent acid resistance K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator
C MarR family
D ECDH10B_1661 marR; DNA-binding transcriptional repressor of multiple antibiotic resistance K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D ECDH10B_1776 slyA; DNA-binding transcriptional activator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
C MerR family
D ECDH10B_0444 cueR; DNA-binding transcriptional activator of copper-responsive regulon genes K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D ECDH10B_3467 zntR; DNA-binding transcriptional activator in response to Zn(II) K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D ECDH10B_4252 soxR; DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D ECDH10B_2282 mlrA; DNA-binding transcriptional regulator K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D ECDH10B_1211 ycgE; predicted DNA-binding transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
C Fur family
D ECDH10B_0748 fur; DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D ECDH10B_4235 zur; DNA-binding transcriptional repressor, Zn(II)-binding K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D ECDH10B_4207 iclR; DNA-binding transcriptional repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D ECDH10B_1358 mhpR; DNA-binding transcriptional activator, 3HPP-binding K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D ECDH10B_0462 allR; DNA-binding transcriptional repressor K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D ECDH10B_1966 kdgR; predicted DNA-binding transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D ECDH10B_4500 yjhI; KpLE2 phage-like element; predicted DNA-binding transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D ECDH10B_3755 yiaJ; predicted DNA-binding transcriptional repressor K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
C CRP/FNR family
D ECDH10B_3533 crp; DNA-binding transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D ECDH10B_1454 fnr; DNA-binding transcriptional dual regulator, global regulator of anaerobic growth K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D ECDH10B_2320 yeiL; DNA-binding transcriptional activator of stationary phase nitrogen survival K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
C Rrf2 family
D ECDH10B_2698 iscR; Fe-S cluster-containing transcription factor K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D ECDH10B_4373 nsrR; predicted DNA-binding transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D ECDH10B_3677 arsR; DNA-binding transcriptional repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D ECDH10B_1564 ydcN; predicted DNA-binding transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D ECDH10B_0886 mntR; DNA-binding transcriptional regulator of mntH K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D ECDH10B_4280 rpiR; DNA-binding transcriptional repressor K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon
D ECDH10B_2592 yfeT; predicted DNA-binding transcriptional regulator K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D ECDH10B_1994 yebK; predicted DNA-binding transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D ECDH10B_4162 birA; bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor, bio-5'-AMP-binding K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D ECDH10B_3436 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D ECDH10B_4551 trpR; DNA-binding transcriptional repressor, tryptophan-binding K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D ECDH10B_3362 sfsB; DNA-binding transcriptional activator of maltose metabolism K07724 ner; Ner family transcriptional regulator
D ECDH10B_4548 nadR; NadR transcriptional repressor / ribosylnicotinamide kinase / NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D ECDH10B_3195 ygiT; predicted DNA-binding transcriptional regulator K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D ECDH10B_1416 puuR; DNA-binding transcriptional repressor K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D ECDH10B_1639 hipB; DNA-binding transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D ECDH10B_1702 dicA; Qin prophage; predicted regulator for DicB K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D ECDH10B_3257 ygjM; predicted DNA-binding transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D ECDH10B_2657 hyfR; DNA-binding transcriptional activator, formate sensing K12146 hyfR; hydrogenase-4 transcriptional activator
D ECDH10B_2877 norR; DNA-binding transcriptional activator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D ECDH10B_2899 fhlA; DNA-binding transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator
D ECDH10B_0142 cdaR; DNA-binding transcriptional activator K02647 cdaR; carbohydrate diacid regulator
D ECDH10B_0829 modE; DNA-binding transcriptional dual regulator K02019 modE; molybdate transport system regulatory protein
D ECDH10B_3734 yiaG; predicted transcriptional regulator K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D ECDH10B_3655 nikR; DNA-binding transcriptional repressor, Ni-binding K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D ECDH10B_4127 metJ; DNA-binding transcriptional repressor, S-adenosylmethionine-binding K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D ECDH10B_1086 putA; multifunctional proline dehydrogenase, delta-1-pyrroline-5-carboxylate dehydrogenase, and DNA-binding transcriptional regulator K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D ECDH10B_1696 relB; Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
D ECDH10B_3910 bglG; transcriptional antiterminator of the bgl operon K03488 licT; beta-glucoside operon transcriptional antiterminator
D ECDH10B_4087 frvR; predicted regulator K18531 frvR; putative frv operon regulatory protein
C Others
D ECDH10B_0312 frmR; regulator protein that represses frmRAB operon K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D ECDH10B_2258 rcnR; transcriptional repressor of rcnA K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D ECDH10B_0391 bolA; regulator of penicillin binding proteins and beta lactamase transcription (morphogene) K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D ECDH10B_4031 rfaH; DNA-binding transcriptional antiterminator K05785 rfaH; transcriptional antiterminator RfaH
D ECDH10B_3414 argR; DNA-binding transcriptional dual regulator, L-arginine-binding K03402 argR; transcriptional regulator of arginine metabolism
D ECDH10B_0741 nagC; DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine K02565 nagC; N-acetylglucosamine repressor
D ECDH10B_1727 dgsA; DNA-binding transcriptional repressor K15545 mlc; transcriptional regulator of PTS gene
D ECDH10B_3782 mtlR; DNA-binding repressor K02562 mtlR; mannitol operon repressor
D ECDH10B_1442 tyrR; DNA-binding transcriptional dual regulator, tyrosine-binding K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D ECDH10B_4326 cadC; DNA-binding transcriptional activator K03765 cadC; transcriptional activator of cad operon
D ECDH10B_3024 ygeH; predictedtranscriptional regulator K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D ECDH10B_2645 gcvR; DNA-binding transcriptional repressor, regulatory protein accessory to GcvA K03567 gcvR; glycine cleavage system transcriptional repressor
D ECDH10B_1524 paaX; DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D ECDH10B_1420 pspF; DNA-binding transcriptional activator K03974 pspF; psp operon transcriptional activator
D ECDH10B_1423 pspC; DNA-binding transcriptional activator K03973 pspC; phage shock protein C
D ECDH10B_1643 lsrR; lsr operon transcriptional repressor K11531 lsrR; lsr operon transcriptional repressor
D ECDH10B_1254 dhaR; predicted DNA-binding transcriptional regulator, dihydroxyacetone K05880 dhaR; transcriptional activator for dhaKLM operon
D ECDH10B_0678 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D ECDH10B_0570 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D ECDH10B_2790 alpA; CP4-57 prophage; DNA-binding transcriptional activator K07733 alpA; prophage regulatory protein
D ECDH10B_3123 yqgE; predicted protein K07735 algH; putative transcriptional regulator
D ECDH10B_0035 caiF; DNA-binding transcriptional activator K08277 caiF; transcriptional activator CaiF
D ECDH10B_0125 dksA; DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D ECDH10B_0369 nrdR; DNA-binding transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D ECDH10B_0222 crl; DNA-binding transcriptional regulator K11926 crl; sigma factor-binding protein Crl
D ECDH10B_3596 rtcR; sigma 54-dependent transcriptional regulator of rtcBA expression K14414 rtcR; transcriptional regulatory protein RtcR
D ECDH10B_1701 dicC; Qin prophage; DNA-binding transcriptional regulator for DicB K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D ECDH10B_0063 mraZ; conserved protein K03925 mraZ; transcriptional regulator MraZ
D ECDH10B_3197 ygiV; predicted transcriptional regulator K07471 ygiV; probable transcriptional regulator
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0