+E Transcription factors KO
#
Transcription Factors - Escherichia coli K-12 W3110
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D JW1944 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D JW0063 araC; DNA-binding transcriptional dual regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D JW3877 rhaR; DNA-binding transcriptional activator, L-rhamnose-binding K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D JW3876 rhaS; DNA-binding transcriptional activator, L-rhamnose-binding K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D JW1724 chbR; DNA-binding transcriptional dual regulator K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D JW4077 adiY; DNA-binding transcriptional activator K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D JW2430 yfeG; predicted DNA-binding transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D JW0553 appY; DNA-binding transcriptional activator K07780 appY; AraC family transcriptional regulator, transcriptional regulator required for anaerobic and stationary phase induction of genes
D JW0555 envY; DNA-binding transcriptional activator K11920 envY; AraC family transcriptional regulator
D JW4023 soxS; DNA-binding transcriptional dual regulator K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D JW5249 marA; DNA-binding transcriptional dual regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D JW4359 rob; DNA-binding transcriptional activator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D JW1379 feaR; DNA-binding transcriptional regulator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D JW0298 ykgD; predicted DNA-binding transcriptional regulator K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D JW3483 gadW; DNA-binding transcriptional activator K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D JW3484 gadX; DNA-binding transcriptional dual regulator K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D JW4079 melR; DNA-binding transcriptional dual regulator K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D JW1779 yeaM; predicted DNA-binding transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D JW2201 ada; fused DNA-binding transcriptional dual regulator and O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D JW2779 gcvA; DNA-binding transcriptional dual regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D JW0244 perR; predicted DNA-binding transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D JW3746 ilvY; DNA-binding transcriptional dual regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D JW3804 metR; DNA-binding transcriptional activator, homocysteine-binding K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D JW0019 nhaR; DNA-binding transcriptional activator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D JW3933 oxyR; DNA-binding transcriptional dual regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D JW2883 argP; DNA-binding transcriptional activator, replication initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D JW0075 leuO; DNA-binding transcriptional activator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D JW2521 hcaR; DNA-binding transcriptional regulator K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator
D JW3089 tdcA; DNA-binding transcriptional activator K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D JW0492 ybbS; transcriptional activator of the allD operon K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D JW5894 cynR; DNA-binding transcriptional dual regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D JW1267 cysB; DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D JW1966 cbl; DNA-binding transcriptional activator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D JW2361 dsdC; DNA-binding transcriptional dual regulator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D JW1333 abgR; predicted DNA-binding transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D JW1788 yeaT; predicted DNA-binding transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D JW1967 nac; DNA-binding transcriptional dual regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D JW4290 yjiE; predicted DNA-binding transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D JW3212 aaeR; predicted DNA-binding transcriptional regulator, efflux system K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D JW3032 ygiP; predicted DNA-binding transcriptional regulator K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon
D JW5607 hdfR; DNA-binding transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D JW1321 ycjZ; predicted DNA-binding transcriptional regulator K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling
C DeoR family
D JW0824 deoR; DNA-binding transcriptional repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D JW3386 glpR; DNA-binding transcriptional repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D JW3100 agaR; DNA-binding transcriptional dual regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D JW2776 fucR; DNA-binding transcriptional activator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D JW2676 srlR; DNA-bindng transcriptional repressor K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D JW4149 ulaR; DNA-binding transriptional dual regulator K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D JW5567 yihW; predicted DNA-binding transcriptional regulator K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
C LacI family
D JW0336 lacI; DNA-binding transcriptional repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D JW2138 galS; DNA-binding transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JW3541 xylR; DNA-binding transcriptional activator, xylose-binding K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JW2805 galR; DNA-binding transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JW3732 rbsR; DNA-binding transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JW3905 cytR; DNA-binding transcriptional dual regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D JW0078 fruR; DNA-binding transcriptional dual regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D JW4200 treR; DNA-binding transcriptional repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D JW5434 ascG; DNA-binding transcriptional regulator K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D JW1650 purR; DNA-binding transcriptional repressor, hypoxanthine-binding K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D JW5946 gntR; DNA-binding transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D JW4221 idnR; DNA-binding transcriptional repressor, 5-gluconate-binding K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D JW3046 ebgR; DNA-binding transcriptional repressor K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D JW1612 malI; DNA-binding transcriptional repressor K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D JW3661 yidP; predicted DNA-binding transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D JW4063 phnF; transcriptional regulator of phosphonate uptake and biodegradation K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D JW5698 frlR; predicted DNA-binding transcriptional regulator K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D JW0719 mngR; DNA-binding transcriptional dual regulator, fatty-acyl-binding K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D JW1176 fadR; DNA-binding transcriptional dual regulator K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D JW0109 pdhR; DNA-binding transcriptional dual regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D JW2947 glcC; DNA-binding transcriptional dual regulator, glycolate-binding K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D JW4287 uxuR; DNA-binding transcriptional repressor K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D JW3065 exuR; DNA-binding transcriptional repressor K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D JW3579 lldR; DNA-binding transcriptional repressor K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D JW5627 dgoR; predicted DNA-binding transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D JW3195 nanR; DNA-binding transcriptional dual regulator K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D JW1445 yncC; predicted DNA-binding transcriptional regulator K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D JW2639 csiR; DNA-binding transcriptional dual regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D JW1533 ydfH; predicted DNA-binding transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D JW5792 yjjM; predicted DNA-binding transcriptional regulator K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
C TetR/AcrR family
D JW0305 betI; DNA-binding transcriptional repressor K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D JW0453 acrR; DNA-binding transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D JW5641 ttk; division inhibitor K05501 slmA; TetR/AcrR family transcriptional regulator
D JW0998 ycdC; predicted DNA-binding transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D JW5874 ydhM; predicted DNA-binding transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D JW1610 uidR; DNA-binding transcriptional repressor K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D JW3232 envR; DNA-binding transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D JW4208 yjgJ; predicted transcriptional regulator K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D JW5159 ycfQ; predicted DNA-binding transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D JW3935 fabR; DNA-binding transcriptional repressor K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D JW0780 ybiH; predicted DNA-binding transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D JW5114 ybjK; predicted DNA-binding transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D JW3721 asnC; DNA-binding transcriptional dual regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D JW0872 lrp; DNA-binding transcriptional dual regulator, leucine-binding K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JW0437 ybaO; predicted DNA-binding transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D JW1901 sdiA; DNA-binding transcriptional activator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D JW5031 ykgK; predicted regulator K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D JW1935 rcsA; DNA-binding transcriptional co-regulator with RcsB K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D JW1023 csgD; DNA-binding transcriptional activator in two-component regulatory system K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D JW3475 yhiF; predicted DNA-binding ranscriptional regulator K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator
D JW5955 bglJ; DNA-binding transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D JW3381 malT; DNA-binding transcriptional activator, maltotriose-ATP-binding K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D JW3480 gadE; DNA-binding transcriptional activator K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator
C MarR family
D JW5248 marR; DNA-binding transcriptional repressor K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D JW5267 slyA; DNA-binding transcriptional activator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D JW2659 mprA; DNA-binding transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
C MerR family
D JW0476 cueR; DNA-binding transcriptional activator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D JW3254 zntR; DNA-binding transcriptional activator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D JW4024 soxR; DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D JW2115 mlrA; DNA-binding transcriptional regulator K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D JW1149 ycgE; predicted DNA-binding transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
C Fur family
D JW0669 fur; DNA-binding transcriptional dual regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D JW5714 zur; DNA-binding transcriptional activator, Zn(II)-binding K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D JW3978 iclR; DNA-binding transcriptional repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D JW0337 mhpR; DNA-binding transcriptional activator, 3HPP-binding K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D JW0494 allR; DNA-binding transcriptional regulator K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D JW1816 kdgR; predicted DNA-binding transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D JW4261 yjhI; predicted DNA-binding transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D JW3546 yiaJ; predicted DNA-binding transcriptional repressor K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
C CRP/FNR family
D JW5702 crp; DNA-binding transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JW1328 fnr; DNA-binding transcriptional dual regulator, global regulator of anaerobic growth K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D JW2150 yeiL; DNA-binding transcriptional activator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
C Rrf2 family
D JW2515 iscR; DNA-binding transcriptional activator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D JW4136 yjeB; predicted DNA-binding transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D JW3468 arsR; DNA-binding transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D JW1430 ydcN; predicted DNA-binding transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D JW0801 mntR; transcriptional regulator of mntH K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D JW4050 rpiR; DNA-binding transcriptional repressor K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon
D JW2420 yfeT; predicted DNA-binding transcriptional regulator K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D JW1842 yebK; predicted DNA-binding transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D JW3941 birA; bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor, bio-5'-AMP-binding K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JW3229 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D JW4356 trpR; DNA-binding transcriptional repressor, tryptophan-binding K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D JW0322 prpR; DNA-binding transcriptional regulator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D JW3155 sfsB; DNA-binding transcriptional regulator K07724 ner; Ner family transcriptional regulator
D JW0068 sgrR; DNA-binding transcriptional regulator K11925 sgrR; SgrR family transcriptional regulator
D JW5800 nadR; bifunctional DNA-binding transcriptional repressor and NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D JW2989 ygiT; predicted DNA-binding transcriptional regulator K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D JW1292 puuR; DNA-binding transcriptional repressor K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D JW1501 hipB; DNA-binding transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D JW1562 dicA; predicted regulator for DicB K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D JW3053 ygjM; predicted DNA-binding transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D JW2476 hyfR; DNA-binding transcriptional activator, formate sensing K12146 hyfR; hydrogenase-4 transcriptional activator
D JW5843 norR; DNA-binding transcriptional activator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D JW2701 fhlA; DNA-binding transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator
D JW5013 cdaR; DNA-binding transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D JW0744 modE; DNA-binding transcriptional dual regulator K02019 modE; molybdate transport system regulatory protein
D JW3524 yiaG; predicted transcriptional regulator K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D JW3446 nikR; DNA-binding transcriptional regulator, Ni-binding K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D JW3909 metJ; DNA-binding transcriptional repressor, S-adenosylmethionine-binding K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D JW0999 putA; fused DNA-binding transcriptional regulator, proline dehydrogenase, and pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JW1556 relB; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
D JW3701 bglG; transcriptional antiterminator of the bgl operon K03488 licT; beta-glucoside operon transcriptional antiterminator
D JW3868 frvR; predicted regulator K18531 frvR; putative frv operon regulatory protein
C Others
D JW0348 frmR; regulator protein that represses frmRAB operon K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D JW2092 yohL; conserved hypothetical protein K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D JW5060 bolA; regulator of penicillin binding proteins and beta lactamase transcription (morphogene) K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D JW3818 rfaH; DNA-binding transcriptional antiterminator K05785 rfaH; transcriptional antiterminator RfaH
D JW3206 argR; DNA-binding transcriptional dual regulator, L-arginine-binding K03402 argR; transcriptional regulator of arginine metabolism
D JW0662 nagC; DNA-binding transcriptional dual regulator K02565 nagC; N-acetylglucosamine repressor
D JW1586 dgsA; DNA-binding transcriptional repressor K15545 mlc; transcriptional regulator of PTS gene
D JW3575 mtlR; DNA-binding transcriptional repressor K02562 mtlR; mannitol operon repressor
D JW1316 tyrR; DNA-binding transcriptional dual regulator, tyrosine-binding K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D JW4094 cadC; DNA-binding transcriptional activator K03765 cadC; transcriptional activator of cad operon
D JW2820 ygeH; predictedtranscriptional regulator K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D JW2464 gcvR; DNA-binding transcriptional repressor, regulatory protein accessory to GcvA K03567 gcvR; glycine cleavage system transcriptional repressor
D JW1394 paaX; DNA-binding transcriptional regulator, aryl-CoA responsive K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D JW1296 pspF; DNA-binding transcriptional activator K03974 pspF; psp operon transcriptional activator
D JW1299 pspC; transcriptional activator K03973 pspC; phage shock protein C
D JW1505 ydeW; predicted DNA-binding transcriptional regulator K11531 lsrR; lsr operon transcriptional repressor
D JW5188 dhaR; predicted DNA-binding transcriptional regulator, dihydroxyacetone K05880 dhaR; transcriptional activator for dhaKLM operon
D JW0602 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D JW2604 alpA; DNA-binding transcriptional activator K07733 alpA; prophage regulatory protein
D JW2915 yqgE; hypothetical protein K07735 algH; putative transcriptional regulator
D JW0033 caiF; DNA-binding transcriptional activator K08277 caiF; transcriptional activator CaiF
D JW0141 dksA; transcriptional regulator of rRNA transcription, DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D JW0403 ybaD; conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D JW0230 crl; DNA-binding transcriptional regulator K11926 crl; sigma factor-binding protein Crl
D JW3385 rtcR; sigma 54-dependent transcriptional regulator of rtcBA expression K14414 rtcR; transcriptional regulatory protein RtcR
D JW1561 dicC; DNA-binding transcriptional regulator K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D JW0079 mraZ; conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
D JW5502 ygiV; predicted transcriptional regulator K07471 ygiV; probable transcriptional regulator
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0