+E Transcription factors KO
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Transcription Factors - Geobacillus kaustophilus
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
C LysR family
D GK1430 gltC; transcription activator of glutamate synthase(LysR family) K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D GK3035 transcriptional regulator (LysR family) K21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD
D GK1408 transcriptional regulator (LysR family) K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D GK0891 transcriptional regulator (LysR family) K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D GK1840 transcriptional regulator (DeoR family) K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D GK3334 transcriptional regulator of sigma-E/sigma-K-dependent gene (stage III sporulation protein D) K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D GK2485 hypothetical conserved protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
D GK1901 transcriptional regulator involved in degradation (LacI family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GK3275 transcriptional regulator (lacI family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GK2810 transcriptional regulator involved in carbon catabolite control K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GK3231 transcriptional repressor of the ribose operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GK2147 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GK1942 transcriptional regulator (LacI family) K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D GK2115 transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
C GntR family
D GK1907 araR; arabinose metabolism transcriptional repressor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D GK1745 treR; transcriptional repressor of trehalose operon (GntR family) K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D GK1855 transcriptional regulator (GntR family) K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D GK2275 transcriptional regulator (GntR family) K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GK1282 transcriptional regulator (GntR family) K03710 K03710; GntR family transcriptional regulator
D GK0396 transcriptional regulator (GntR family) K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D GK2015 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D GK2743 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D GK0738 transcriptional regulator (GntR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D GK1620 transcriptional regulator (GntR family) K07979 ytrA; GntR family transcriptional regulator
C TetR/AcrR family
D GK2689 transcriptional regulator (TetR/AcrR family) K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D GK1596 transcriptional regulator (TetR/AcrR family) K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
C Lrp/AsnC family
C LuxR family
D GK2670 transcriptional regulator K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
C MarR family
D GK0652 transcriptional regulator K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr
D GK0958 transcriptional regulator (MarR family) K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D GK1864 transcriptional regulator (MarR family) K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D GK1605 transcriptional regulator (MarR family) K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D GK1326 glnR; transcriptional repressor of glutamine synthetase K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D GK3095 transcriptional regulator involved in mercury resistance operon K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D GK0438 transcriptional activator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D GK1748 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D GK1860 transcriptional regulator K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator
C Fur family
D GK2317 transcriptional regulator (Fur family) (ferric uptake regulator) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D GK2469 transcriptional regulator (Fur family) K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D GK0478 transcriptional regulator (Fur family) K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
D GK1499 transcriptional regulator (IclR family) K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D GK1536 transcriptional regulator (IclR family) K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D GK1968 transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D GK0768 fnr; transcriptional regulator of anaerobic genes (FNR/CRP family) K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D GK1738 hypothetical conserved protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D GK2565 hypothetical conserved protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
C ArsR family
D GK3224 transcriptional regulator (ArsR family) K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D GK0587 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D GK0351 cadmium efflux system accessory protein (cadmium-binding protein) K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D GK0584 cadmium efflux system accessory protein (cadmium-binding protein) K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D GK0749 cadmium efflux system accessory protein (cadmium-binding protein) K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D GK0580 transcriptional regulator (ArsR family) K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D GK1406 transcriptional regulator (ArsR family) K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D GK2134 transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
C XRE family
C PadR family
C Other families
D GK2416 transcriptional regulator (manganese transport regulator) K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D GK2180 birA; biotin [acetyl-CoA carboxylase] synthetase; transcriptional repressor of the biotin operon K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D GK0040 transcriptional repressor of the purine operon K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D GK0709 acetoin operon expression regulatory protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D GK0185 transcriptional regulator (NtrC/NifA family) K06714 rocR; arginine utilization regulatory protein
D GK0242 hypothetical conserved protein K01926 rex; redox-sensing transcriptional repressor
D GK1215 transcription pleiotropic repressor K03706 codY; transcriptional pleiotropic repressor
D GK0181 transcriptional regulator K07727 K07727; putative transcriptional regulator
D GK0551 hypothetical protein K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D GK0232 hypothetical conserved protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C Other families
B Other transcription factors
C BglG family
D GK3445 transcription antiterminator K26932 sacT; sacPA operon transcriptional antiterminator
D GK0990 transcription antiterminator K03480 glcT; transcriptional antiterminator
D GK1947 transcriptional regulator K03483 mtlR; mannitol operon transcriptional activator
D GK2018 hypothetical conserved protein K03483 mtlR; mannitol operon transcriptional activator
C Others
D GK0901 hypothetical conserved protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D GK1425 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D GK0030 transition state regulator K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D GK0049 spoVT; stage V sporulation protein T (transcriptional regulator) K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D GK3489 spo0J; stage 0 sporulation protein J (antagonist of Soj) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GK3491 hypothetical conserved protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GK2154 transcriptional antiterminator of glycerol uptake operon K02443 glpP; glycerol uptake operon antiterminator
D GK2390 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D GK2506 transcriptional repressor of class I heat shock genes K03705 hrcA; heat-inducible transcriptional repressor
D GK0618 transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D GK0622 thiamine-phosphate pyrophosphorylase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D GK0075 transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D GK2034 repressor in the phenylacetic acid catabolism K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D GK1997 repressor in the phenylacetic acid catabolism K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D GK3059 transcriptional regulator (central glycolytic gene regulator) K05311 cggR; central glycolytic genes regulator
D GK2213 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) (trp RNA-binding attenuation protein) K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D GK1147 pyrimidine operon regulatory protein; uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GK2570 transcriptional activator K06314 rsfA; prespore-specific regulator
D GK3413 hypothetical conserved protein K06314 rsfA; prespore-specific regulator
D GK1714 transcriptional repressor of sporulation and degradative enzymes production K07734 paiB; transcriptional regulator
D GK0739 transcriptional repressor of sporulation and degradative enzymes production K07734 paiB; transcriptional regulator
D GK2723 hypothetical conserved protein K07738 nrdR; transcriptional repressor NrdR
D GK0384 transcriptional activator of the histidine utilization operon K09683 hutP; hut operon positive regulatory protein
D GK0678 comK; competence transcription factor K02250 comK; competence protein ComK
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0