+D
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Transfer RNA Biogenesis - Gloeobacter violaceus
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D glr4119 ycf56; ORF_ID:glr4119; hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
C CCA adding factors
D gll1453 ORF_ID:gll1453; probable poly A polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D gll2924 ORF_ID:gll2924 K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
C tRNA splicing ligase complex
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
C tRNA import factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D gll2378 gltX; ORF_ID:gll2378 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D gll2525 ORF_ID:gll2525 K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D gll3651 ileS; ORF_ID:gll3651 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D gll4081 leuS; ORF_ID:gll4081 K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D gll3023 metS; ORF_ID:gll3023 K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D glr4279 argS; ORF_ID:glr4279 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D gll3356 lysS; ORF_ID:gll3356 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D gll1928 aspS; ORF_ID:gll1928 K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
C Other AARSs
D gll2348 alaS; ORF_ID:gll2348 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D gll2349 ORF_ID:gll2349; similar to alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D glr2886 thrS; ORF_ID:glr2886 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D glr0716 serS; ORF_ID:glr0716 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D glr0851 cysS; ORF_ID:glr0851 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D glr2919 valS; ORF_ID:glr2919 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D gll2557 hisS; ORF_ID:gll2557 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D glr3128 pheS; ORF_ID:glr3128 K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D gll2926 pheT; ORF_ID:gll2926 K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D gll4415 tyrS; ORF_ID:gll4415 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D glr3011 trpS; ORF_ID:glr3011 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
C AARS associated factors
D gll0929 ORF_ID:gll0929 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferase
C Methyltransferases
C Psudouridine synthases
D gll3569 ORF_ID:gll3569 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D gll3690 ORF_ID:gll3690 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
C Thiolation factors
D gll4384 ORF_ID:gll4384 K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
C Elongator complex
C Elongator related proteins
C Other tRNA modification factors
D glr3274 ORF_ID:glr3274; hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D gll3248 ORF_ID:gll3248 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D glr2452 ORF_ID:glr2452; probable thiophene and furan oxidation protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D gll0881 gidA; ORF_ID:gll0881 K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
B tRNA degradation factors
C TRAMP complex
C Rapid tRNA decay (RTD) pathway factors
D gll2643 ORF_ID:gll2643 K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D gll3645 ORF_ID:gll3645 K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
D glr1475 rnpA; ORF_ID:glr1475 K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D glr4119 ycf56; ORF_ID:glr4119; hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D gll1616 ORF_ID:gll1616 K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D gll3123 ORF_ID:gll3123 K03684 rnd; ribonuclease D [EC:3.1.13.5]
D glr3747 ORF_ID:glr3747; probable ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
C CCA adding factors
D gll1453 ORF_ID:gll1453; probable poly A polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D gll2924 ORF_ID:gll2924 K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D gll4081 leuS; ORF_ID:gll4081 K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D gll2525 ORF_ID:gll2525 K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D gll4415 tyrS; ORF_ID:gll4415 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D glr3011 trpS; ORF_ID:glr3011 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D glr2886 thrS; ORF_ID:glr2886 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D gll3651 ileS; ORF_ID:gll3651 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D gll3356 lysS; ORF_ID:gll3356 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D gll2348 alaS; ORF_ID:gll2348 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D gll2349 ORF_ID:gll2349; similar to alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D glr2919 valS; ORF_ID:glr2919 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D gll3023 metS; ORF_ID:gll3023 K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D glr0716 serS; ORF_ID:glr0716 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D gll1928 aspS; ORF_ID:gll1928 K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D glr1446 glyQ; ORF_ID:glr1446 K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D glr1646 glyS; ORF_ID:glr1646 K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D glr0851 cysS; ORF_ID:glr0851 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D gll2378 gltX; ORF_ID:gll2378 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D glr4279 argS; ORF_ID:glr4279 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D glr3128 pheS; ORF_ID:glr3128 K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D gll2926 pheT; ORF_ID:gll2926 K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D gll2557 hisS; ORF_ID:gll2557 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
C Trans-editing factors
B tRNA modification factors
C Deaminases
D gll1053 ORF_ID:gll1053; putative cytidine and deoxycytidylate deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
C Methylthiotransferases
D glr4015 ORF_ID:glr4015; hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
C Methyltransferases
D glr0536 ORF_ID:glr0536; hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D glr2140 ORF_ID:glr2140; probable methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D glr3603 ORF_ID:glr3603 K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D glr0889 ORF_ID:glr0889 K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D glr2452 ORF_ID:glr2452; probable thiophene and furan oxidation protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D gll0699 ORF_ID:gll0699; probable tRNA/rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D gll0554 ORF_ID:gll0554; probable tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
C Psudouridine synthases
D gll3569 ORF_ID:gll3569 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D gll3690 ORF_ID:gll3690 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
C Thiolation factors
D gll0551 ORF_ID:gll0551 K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D gll4382 ORF_ID:gll4382; hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D gll4384 ORF_ID:gll4384 K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D glr1472 ORF_ID:glr1472; hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
C KEOPS/EKC complex
C Other tRNA modification factors
D gll0881 gidA; ORF_ID:gll0881 K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D gll3248 ORF_ID:gll3248 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D glr3587 ORF_ID:glr3587 K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D gll3037 ORF_ID:gll3037; hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D glr3579 6-pyruvoyl-tetrahydropterin synthase homolog; ORF_ID:glr3579 K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D gll3036 ORF_ID:gll3036; hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D gll3593 ORF_ID:gll3593; hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D gll1464 ORF_ID:gll1464; hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D glr0802 ORF_ID:glr0802 K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D gll0401 ycf62; ORF_ID:gll0401; hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D gll4285 ORF_ID:gll4285; hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D glr3274 ORF_ID:glr3274; hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D gll1354 ORF_ID:gll1354 K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D gll2992 ORF_ID:gll2992; hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
B tRNA degradation factors
C gll1448 ORF_ID:gll1448; Zam protein homolog K12573 rnr; ribonuclease R [EC:3.1.13.1]
C gll3149 ORF_ID:gll3149 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C gll0844 ORF_ID:gll0844; hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C glr3875 ORF_ID:glr3875; hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C glr4343 ORF_ID:glr4343; virulence-associated protein VapC homolog K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024