+D GENES KO
#
KEGG Orthology (KO) - Hyphomonas neptunium
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:hne00010]
D HNE_1741 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HNE_1733 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HNE_2309 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D HNE_3181 fda; fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HNE_1792 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HNE_3179 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HNE_3180 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HNE_0031 phosphoglycerate mutase 1 family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HNE_3200 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HNE_1980 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HNE_2098 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HNE_0686 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HNE_2995 pyruvate dehydrogenase E1 component homolog K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HNE_1977 pdhA; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HNE_1976 pdhB; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HNE_1975 pdhC; pyruvate dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HNE_1974 lpdA1; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3262 lpdA2; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_0560 S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_3486 alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HNE_1402 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HNE_3238 putative phosphoglucomutase/phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HNE_2705 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:hne00020]
D HNE_3453 citrate synthase family protein K01647 CS; citrate synthase [EC:2.3.3.1]
D HNE_3454 citrate synthase family protein K01647 CS; citrate synthase [EC:2.3.3.1]
D HNE_1782 gltA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D HNE_3514 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HNE_1177 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HNE_0312 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D HNE_0313 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HNE_1974 lpdA1; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3262 lpdA2; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_0311 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HNE_0310 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HNE_3245 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HNE_3247 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HNE_3243 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HNE_3244 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HNE_2950 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HNE_3218 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HNE_2705 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HNE_2995 pyruvate dehydrogenase E1 component homolog K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HNE_1977 pdhA; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HNE_1976 pdhB; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HNE_1975 pdhC; pyruvate dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:hne00030]
D HNE_1733 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HNE_1738 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HNE_1739 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D HNE_3370 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HNE_3455 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HNE_3235 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HNE_0706 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HNE_0207 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HNE_3238 putative phosphoglucomutase/phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HNE_0362 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HNE_1740 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D HNE_1187 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HNE_0464 putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D HNE_3181 fda; fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HNE_2309 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:hne00040]
D HNE_3236 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HNE_1147 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HNE_3370 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HNE_2420 putative L-ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:hne00051]
D HNE_0775 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D HNE_3238 putative phosphoglucomutase/phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HNE_0793 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HNE_2420 putative L-ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D HNE_2134 oxidoreductase, aldo/keto reductase family K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D HNE_2135 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D HNE_2133 mandelate racemase/muconate lactonizing enzyme family protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D HNE_2136 oxidoreductase, short chain dehydrogenase/reductase family K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D HNE_2309 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D HNE_3181 fda; fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HNE_1792 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HNE_0794 putative GDP-6-deoxy-D-lyxo-4-hexulose reductase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D HNE_0438 PTS system IIA component, mannose/fructose/sorbose (Man) family K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:hne00052]
D HNE_1147 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HNE_3238 putative phosphoglucomutase/phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HNE_1741 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HNE_2003 putative 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D HNE_2506 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HNE_1737 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:hne00053]
D HNE_3236 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HNE_0464 putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D HNE_2134 oxidoreductase, aldo/keto reductase family K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D HNE_2639 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:hne00500]
D HNE_2506 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HNE_1737 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HNE_1147 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HNE_2446 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HNE_1575 otsA; UDP-forming alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D HNE_1576 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D HNE_3238 putative phosphoglucomutase/phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HNE_1741 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HNE_1733 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hne00520]
D HNE_2048 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HNE_0778 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HNE_0168 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HNE_0705 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HNE_2624 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D HNE_1886 conserved hypothetical protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D HNE_1885 nucleotidyl transferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D HNE_1344 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HNE_0397 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HNE_2698 NAD-dependent epimerase/dehydratase family protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D HNE_1200 galE; UDP-glucose 4-epimerase K12448 UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5]
D HNE_1741 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HNE_3238 putative phosphoglucomutase/phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HNE_1147 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HNE_3236 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HNE_2639 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D HNE_0438 PTS system IIA component, mannose/fructose/sorbose (Man) family K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HNE_1733 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HNE_0775 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D HNE_0793 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HNE_0794 putative GDP-6-deoxy-D-lyxo-4-hexulose reductase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
C 00620 Pyruvate metabolism [PATH:hne00620]
D HNE_1402 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HNE_2995 pyruvate dehydrogenase E1 component homolog K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HNE_1977 pdhA; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HNE_1976 pdhB; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HNE_1975 pdhC; pyruvate dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HNE_1974 lpdA1; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3262 lpdA2; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_0560 S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_3486 alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_2098 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HNE_1156 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HNE_2249 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HNE_2250 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HNE_3473 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HNE_1192 lldD; L-lactate dehydrogenase (cytochrome) K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D HNE_1654 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D HNE_3387 putative lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HNE_3406 putative hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HNE_0649 metallo-beta-lactamase superfamily K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HNE_0296 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D HNE_3218 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HNE_2950 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HNE_1122 putative phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HNE_2705 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HNE_0686 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HNE_1238 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D HNE_2706 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3065 acetyl-CoA acetyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3133 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0758 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0959 bktB; beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0984 conserved hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0440 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hne00630]
D HNE_1239 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D HNE_1402 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HNE_1238 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D HNE_3218 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HNE_3453 citrate synthase family protein K01647 CS; citrate synthase [EC:2.3.3.1]
D HNE_3454 citrate synthase family protein K01647 CS; citrate synthase [EC:2.3.3.1]
D HNE_1782 gltA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D HNE_3514 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HNE_2706 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3065 acetyl-CoA acetyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3133 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0758 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0959 bktB; beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0984 conserved hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3404 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D HNE_0843 MaoC domain protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D HNE_3118 ccrA; crotonyl-CoA reductase K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85]
D HNE_1762 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D HNE_3115 putative methylmalonyl-CoA mutase K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D HNE_3379 isobutyryl-CoA dehydrogenase K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12]
D HNE_3531 MaoC domain protein K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D HNE_0078 mclA; malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D HNE_1058 carbamoyl-phosphate synthase L chain/biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D HNE_1007 putative propionyl-CoA carboxylase, beta subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D HNE_1326 mutB; methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HNE_1327 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HNE_2467 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D HNE_3433 gyaR; glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D HNE_0704 gph; phosphoglycolate phosphatase, bacterial K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HNE_2245 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HNE_1003 HAD hydrolase, IA family K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HNE_2084 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HNE_2060 glyA; serine hydroxymethyl transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HNE_2721 glycine cleavage system P-protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D HNE_2722 glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D HNE_2719 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HNE_1974 lpdA1; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3262 lpdA2; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_2720 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D HNE_2744 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D HNE_1187 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HNE_0787 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D HNE_2397 hutG; N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:hne00640]
D HNE_1402 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HNE_1974 lpdA1; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3262 lpdA2; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D HNE_0672 Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HNE_1156 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HNE_2249 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HNE_2250 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HNE_3473 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HNE_1058 carbamoyl-phosphate synthase L chain/biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D HNE_1007 putative propionyl-CoA carboxylase, beta subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D HNE_1762 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D HNE_1326 mutB; methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HNE_1327 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HNE_0310 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HNE_0311 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HNE_1828 mmsA1; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HNE_2176 mmsA2; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00650 Butanoate metabolism [PATH:hne00650]
D HNE_2706 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3065 acetyl-CoA acetyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3133 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0758 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0959 bktB; beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0984 conserved hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3469 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D HNE_0672 Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D HNE_0843 MaoC domain protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D HNE_2313 PHA/PHB synthase family protein K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D HNE_2024 PHA-synthase 2 K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D HNE_0180 phaZ; polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D HNE_3404 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D HNE_3245 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HNE_3247 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HNE_3243 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HNE_3244 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HNE_2325 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HNE_0174 gbd; 4-hydroxybutyrate dehydrogenase, NAD-dependent K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D HNE_1080 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HNE_3374 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HNE_2894 dxnG; 3-oxoadipate CoA-succinyl transferase, alpha subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D HNE_2893 dxnH; 3-oxoadipate CoA-succinyl transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D HNE_0125 bdhA; 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D HNE_0451 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_2501 putative acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_0865 putative benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_2213 thiamine pyrophosphate-dependent enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_0449 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HNE_1094 oxidoreductase, short chain dehydrogenase/reductase family K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D HNE_0924 oxidoreductase, short chain dehydrogenase/reductase family K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:hne00660]
D HNE_0451 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_2501 putative acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_0865 putative benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_2213 thiamine pyrophosphate-dependent enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_0449 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HNE_0310 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HNE_0311 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HNE_1098 MaoC domain protein K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D HNE_0078 mclA; malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D HNE_3531 MaoC domain protein K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D HNE_1477 leuC2; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HNE_0047 leuC1; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HNE_1077 putative 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HNE_1476 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HNE_0052 leuD1; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HNE_1078 leuD2; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HNE_0056 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:hne00562]
D HNE_3187 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HNE_1365 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HNE_0176 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D HNE_2184 iolE; 2-keto-myo-inositol dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D HNE_2183 iolD; thiamine pyrophosphate-dependent enzyme IolD K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D HNE_2185 iolB; myo-inositol catabolism protein IolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D HNE_2182 iolC; kinase IolC K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D HNE_1828 mmsA1; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HNE_2176 mmsA2; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HNE_1792 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hne00190]
D HNE_1742 nuoA; NADH-quinone oxidoreductase, A subunit K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D HNE_1743 nuoB; NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D HNE_1744 nuoC; NADH-quinone oxidoreductase, C subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D HNE_1745 nuoD; NADH-quinone oxidoreductase, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D HNE_1748 nuoE; NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D HNE_1749 nuoF; NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D HNE_1751 nuoG; NADH-quinone oxidoreductase, G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D HNE_1752 nuoH; NADH-quinone oxidoreductase, H subunit K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D HNE_1753 nuoI; NADH-quinone oxidoreductase, I subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D HNE_1754 nuoJ; NADH-quinone oxidoreductase, J subunit K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D HNE_1755 nuoK; NADH-quinone oxidoreductase, K subunit K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D HNE_1756 nuoL; NADH-quinone oxidoreductase, L subunit K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D HNE_1757 nuoM; NADH-quinone oxidoreductase, M subunit K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D HNE_1758 nuoN; NADH-quinone oxidoreductase, N subunit K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D HNE_3245 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HNE_3247 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HNE_3243 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HNE_3244 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D HNE_0350 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D HNE_0351 putative ubiquinol-cytochrome c reductase, cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HNE_0352 putative ubiquinol-cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D HNE_1040 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HNE_1043 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D HNE_1039 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D HNE_1038 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D HNE_1042 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D HNE_2318 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HNE_1232 ccoN; cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D HNE_1231 ccoO; cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D HNE_1230 ccoQ; cytochrome c oxidase, cbb3-type, CcoQ subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D HNE_1229 ccoP; cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D HNE_1659 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HNE_1658 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HNE_1657 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D HNE_0912 cytochrome c family protein K08738 CYC; cytochrome c
D HNE_0658 cytochrome c family protein K08738 CYC; cytochrome c
D HNE_1894 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HNE_1892 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HNE_1893 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HNE_1895 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HNE_1891 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HNE_1919 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HNE_1922 ATP synthase F0, B subunit family protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HNE_1921 ATP synthase F0, B subunit family protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HNE_1920 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HNE_0016 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D HNE_2260 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:hne00680]
D HNE_0560 S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_3486 alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_0555 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D HNE_2060 glyA; serine hydroxymethyl transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HNE_1980 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HNE_1122 putative phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HNE_3218 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HNE_0078 mclA; malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D HNE_3181 fda; fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HNE_2309 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D HNE_1402 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HNE_0031 phosphoglycerate mutase 1 family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HNE_3200 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HNE_3126 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HNE_3128 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HNE_0453 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:hne00910]
D HNE_1559 narK; nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D HNE_1560 narG; nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D HNE_1561 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D HNE_1564 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D HNE_2234 nirB; nitrite reductase [NAD(P)H], large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D HNE_2235 nirD; nitrite reductase [NAD(P)H], small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D HNE_0476 oxidoreductase, 2-nitropropane dioxygenase family K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D HNE_1329 oxidoreductase, 2-nitropropane dioxygenase family K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D HNE_3105 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HNE_2084 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HNE_0093 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HNE_0092 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HNE_0015 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D HNE_1567 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:hne00920]
D HNE_0776 cysNC; sulfate adenylyltransferase, large subunit/adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HNE_0777 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HNE_0169 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D HNE_0327 cysH; phosophoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D HNE_2476 putative sulfur oxidation diheme cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D HNE_2479 putative sulfur oxidation cytochrome SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D HNE_2478 soxY; sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D HNE_2477 putative sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D HNE_0325 putative sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D HNE_2427 sqr; sulfide-quinone oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D HNE_2480 putative sulfide dehydrogenase, flavoprotein subunit K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D HNE_2481 putative sulfide dehydrogenase, cytochrome subunit K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D HNE_1419 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HNE_1850 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HNE_1420 cysteine synthase/cystathionine beta-synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HNE_0181 cysteine synthase/cystathionine beta-synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HNE_0049 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HNE_3283 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HNE_2672 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D HNE_0828 alkK; medium-chain-fatty-acid-CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D HNE_1845 acyl-CoA dehydrogenase family protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D HNE_0668 acyl-CoA dehydrogenase family protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:hne00061]
D HNE_1156 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HNE_2249 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HNE_2250 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HNE_3473 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HNE_2157 acpP3; acyl carrier protein K02078 acpP; acyl carrier protein
D HNE_1591 acpP1; acyl carrier protein K02078 acpP; acyl carrier protein
D HNE_2160 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HNE_1162 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HNE_2380 putative 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HNE_2156 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HNE_0974 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2158 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2812 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2754 NAD dependent epimerase/dehydratase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2076 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2205 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_3435 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D HNE_3436 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D HNE_2786 trans-2-enoyl-ACP reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HNE_3287 fabK; trans-2-enoyl-ACP reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:hne00071]
D HNE_2706 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3065 acetyl-CoA acetyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3133 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0758 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0959 bktB; beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0984 conserved hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0672 Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D HNE_2690 mmgC; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_2770 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_2772 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_2795 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_0516 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_0809 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_0278 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_0669 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D HNE_2022 aas; 2-acylglycerophosphoethanolamine acyltransferase/Acyl-[acyl-carrier-protein] synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D HNE_1888 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D HNE_0560 S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_3486 alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:hne00121]
D HNE_0099 baiB; bile acid-coenzyme A ligase K15868 baiB; bile acid-coenzyme A ligase [EC:6.2.1.7]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:hne00561]
D HNE_2744 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HNE_1335 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HNE_1161 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HNE_2147 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HNE_3392 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HNE_2608 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:hne00564]
D HNE_0982 NAD-dependent glycerol-3-phosphate dehydrogenase family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HNE_2147 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HNE_3392 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HNE_2608 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HNE_0098 hydrolase, alpha/beta fold family K01048 pldB; lysophospholipase [EC:3.1.1.5]
D HNE_2409 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HNE_0902 glycerophosphoryl diester phosphodiesterase family K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HNE_0827 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HNE_2022 aas; 2-acylglycerophosphoethanolamine acyltransferase/Acyl-[acyl-carrier-protein] synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D HNE_1773 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HNE_1243 phosphatidylserine decarboxylase-related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D HNE_1580 HAD hydrolase, IB family K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D HNE_0456 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:hne00600]
D HNE_2956 pyridoxal-dependent decarboxylase conserved domain protein K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27]
D HNE_2178 sulfatase family protein K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D HNE_2449 sulfatase family protein K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D HNE_2571 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:hne00230]
D HNE_1216 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HNE_3238 putative phosphoglucomutase/phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HNE_0362 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HNE_0717 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HNE_0922 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HNE_2264 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HNE_1942 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D HNE_2606 purS; phosphoribosylformylglycinamidine synthase PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D HNE_1937 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D HNE_2263 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D HNE_3507 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D HNE_3506 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HNE_2605 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HNE_1969 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HNE_3372 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HNE_1929 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HNE_0363 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HNE_3388 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HNE_1804 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HNE_2269 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HNE_3310 rdgB; non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HNE_1071 putative xanthine dehydrogenase, molybdenum-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D HNE_1072 putative xanthine dehydrogenase, FAD-binding subunit K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D HNE_1073 putative xanthine dehydrogenase, iron-sulfur binding subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D HNE_1808 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HNE_2153 putative guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HNE_1555 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HNE_0869 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HNE_2255 ribonucleoside reductase homolog K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HNE_0373 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HNE_2050 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D HNE_0855 HD domain protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D HNE_0873 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HNE_1801 phosphatase, Ppx/GppA family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HNE_2259 phosphatase, Ppx/GppA family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HNE_3124 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HNE_1294 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D HNE_1938 add; adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D HNE_3343 Ser/Thr protein phosphatase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D HNE_2830 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HNE_2004 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HNE_0776 cysNC; sulfate adenylyltransferase, large subunit/adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HNE_0777 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:hne00240]
D HNE_0644 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HNE_2892 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HNE_2302 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HNE_2303 putative dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HNE_0862 putative dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HNE_3488 pyrD; dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D HNE_0874 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HNE_0128 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HNE_1770 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HNE_2269 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HNE_2004 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HNE_1355 maf; maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HNE_0002 putative maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HNE_1794 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HNE_0193 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HNE_3440 putative uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D HNE_1929 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HNE_3343 Ser/Thr protein phosphatase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D HNE_1295 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HNE_2673 putative deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D HNE_1555 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HNE_0869 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HNE_2255 ribonucleoside reductase homolog K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HNE_0373 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HNE_0855 HD domain protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D HNE_1813 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HNE_3267 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HNE_3149 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D HNE_0459 thyB; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HNE_1252 monooxygenase, luciferase family K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46]
D HNE_1257 isochorismatase family protein K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]
D HNE_0523 nitroreductase family protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:hne00250]
D HNE_2968 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HNE_0652 aminotransferase, classes I and II K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HNE_0690 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HNE_3324 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HNE_1675 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HNE_0971 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HNE_3491 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HNE_3465 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HNE_3124 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HNE_1969 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HNE_2302 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HNE_2325 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HNE_0093 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HNE_0092 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HNE_3105 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HNE_2988 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HNE_2084 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HNE_0644 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HNE_2892 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HNE_1937 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D HNE_0778 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HNE_0717 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:hne00260]
D HNE_1643 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HNE_0618 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HNE_0061 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HNE_2310 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HNE_0947 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D HNE_1045 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HNE_0475 ltaE; threonine aldolase, low-specificity K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D HNE_2060 glyA; serine hydroxymethyl transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HNE_0031 phosphoglycerate mutase 1 family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HNE_3200 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HNE_2744 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D HNE_3126 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HNE_3128 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HNE_0453 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HNE_2062 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D HNE_2721 glycine cleavage system P-protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D HNE_2722 glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D HNE_2719 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HNE_1974 lpdA1; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3262 lpdA2; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_2720 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D HNE_1940 oxidoreductase, FAD-binding K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D HNE_2219 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D HNE_1212 Cys/Met metabolism PLP-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D HNE_1878 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HNE_0171 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HNE_1148 pyridoxal-phosphate-dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HNE_3474 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HNE_3476 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HNE_1640 ectB; diaminobutyrate-2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D HNE_1639 ectA; L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D HNE_1641 estC; ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D HNE_1642 ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55]
C 00270 Cysteine and methionine metabolism [PATH:hne00270]
D HNE_1850 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HNE_1420 cysteine synthase/cystathionine beta-synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HNE_0181 cysteine synthase/cystathionine beta-synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HNE_0049 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HNE_1212 Cys/Met metabolism PLP-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D HNE_1418 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HNE_0786 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HNE_0354 mtaP; methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D HNE_0363 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HNE_3448 mdeA; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D HNE_1210 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D HNE_0788 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HNE_1643 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HNE_0618 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HNE_0061 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HNE_2310 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HNE_3283 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HNE_2885 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D HNE_2672 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D HNE_3091 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_3205 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_2367 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_1374 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HNE_0301 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D HNE_2968 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HNE_0652 aminotransferase, classes I and II K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HNE_1419 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HNE_3218 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HNE_1878 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HNE_3126 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HNE_3128 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:hne00280]
D HNE_3091 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_3205 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_2367 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_1615 ldh1; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D HNE_2735 ldh2; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D HNE_1974 lpdA1; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3262 lpdA2; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_2690 mmgC; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_2770 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_2772 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_2795 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_0516 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_0809 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_0278 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D HNE_1272 ivd2; isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D HNE_0672 Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HNE_1058 carbamoyl-phosphate synthase L chain/biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D HNE_1007 putative propionyl-CoA carboxylase, beta subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D HNE_1762 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D HNE_1326 mutB; methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HNE_1327 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HNE_0895 3-hydroxyisobutyrate dehydrogenase family protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D HNE_1826 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D HNE_1828 mmsA1; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HNE_2176 mmsA2; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HNE_1285 mccA; methylcrotonoyl-CoA carboxylase alpha chain K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D HNE_1277 carboxyl transferase domain protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D HNE_1282 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D HNE_1080 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HNE_3374 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HNE_2894 dxnG; 3-oxoadipate CoA-succinyl transferase, alpha subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D HNE_2893 dxnH; 3-oxoadipate CoA-succinyl transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D HNE_2706 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3065 acetyl-CoA acetyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3133 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0758 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0959 bktB; beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0984 conserved hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hne00290]
D HNE_0171 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HNE_1148 pyridoxal-phosphate-dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HNE_1477 leuC2; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HNE_0047 leuC1; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HNE_1077 putative 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HNE_1476 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HNE_0052 leuD1; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HNE_1078 leuD2; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HNE_0056 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HNE_0451 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_2501 putative acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_0865 putative benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_2213 thiamine pyrophosphate-dependent enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_0449 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HNE_0447 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HNE_1411 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HNE_3091 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_3205 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_2367 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_1615 ldh1; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D HNE_2735 ldh2; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D HNE_0440 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:hne00300]
D HNE_2310 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HNE_1643 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HNE_0618 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HNE_0061 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HNE_2800 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HNE_0437 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HNE_0421 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D HNE_0580 argD; acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HNE_3529 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HNE_3463 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HNE_3029 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diamino-pimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HNE_3028 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:hne00310]
D HNE_0313 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HNE_1974 lpdA1; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3262 lpdA2; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D HNE_0672 Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HNE_2706 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3065 acetyl-CoA acetyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3133 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0758 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0959 bktB; beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0984 conserved hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_2325 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HNE_3138 putative L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D HNE_3117 putative D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:hne00220]
D HNE_0592 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HNE_3491 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HNE_3465 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HNE_1937 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D HNE_2084 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HNE_3105 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D HNE_2968 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HNE_0652 aminotransferase, classes I and II K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HNE_3174 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D HNE_0418 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D HNE_2314 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D HNE_0580 argD; acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:hne00330]
D HNE_3508 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D HNE_2998 peptidyl-arginine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D HNE_2997 hydrolase, carbon-nitrogen family K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D HNE_2991 decarboxylase, group IV K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D HNE_0585 putative carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HNE_1334 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1220 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1113 hydrolase, carbon-nitrogen family K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_0817 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1602 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1996 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D HNE_1993 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D HNE_1995 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D HNE_1387 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HNE_2988 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HNE_2567 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HNE_3429 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D HNE_2930 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D HNE_1861 oxidoreductase, 2OG-Fe(II) oxygenase family K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D HNE_2968 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HNE_0652 aminotransferase, classes I and II K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HNE_3117 putative D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D HNE_1940 oxidoreductase, FAD-binding K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
C 00340 Histidine metabolism [PATH:hne00340]
D HNE_0579 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D HNE_0578 tRNA synthetase class II core domain protein K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D HNE_0064 hisE; phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D HNE_3376 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D HNE_0070 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D HNE_0071 hisH; imidazoleglycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D HNE_0066 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D HNE_0073 hisB; imidazoleglycerol phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D HNE_1125 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_0095 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_2357 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_1346 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D HNE_2396 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D HNE_2398 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D HNE_2395 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D HNE_2394 hutF; formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D HNE_2397 hutG; N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:hne00350]
D HNE_2968 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HNE_0652 aminotransferase, classes I and II K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HNE_1125 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_0095 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_2357 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_2900 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D HNE_1992 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D HNE_2896 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D HNE_0613 decarboxylase, group II K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D HNE_0560 S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_3486 alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_2325 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HNE_0810 beta-eliminating lyase family protein K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
D HNE_1493 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D HNE_2119 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00360 Phenylalanine metabolism [PATH:hne00360]
D HNE_1395 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D HNE_0613 decarboxylase, group II K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D HNE_1105 putative aerobic phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D HNE_2804 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D HNE_3469 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D HNE_2968 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HNE_0652 aminotransferase, classes I and II K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HNE_1125 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_0095 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_2357 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_1493 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D HNE_2119 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D HNE_2900 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D HNE_2416 dadA; D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D HNE_3117 putative D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D HNE_2115 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D HNE_1334 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1220 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1113 hydrolase, carbon-nitrogen family K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_0817 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1602 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1888 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:hne00380]
D HNE_0313 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HNE_1974 lpdA1; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3262 lpdA2; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D HNE_0672 Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HNE_2706 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3065 acetyl-CoA acetyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3133 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0758 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0959 bktB; beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0984 conserved hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0613 decarboxylase, group II K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HNE_1334 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1220 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1113 hydrolase, carbon-nitrogen family K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_0817 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1602 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_2467 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D HNE_2115 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hne00400]
D HNE_0709 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HNE_0082 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D HNE_2248 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D HNE_0003 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D HNE_0081 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D HNE_0195 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D HNE_0823 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HNE_1790 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HNE_1789 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HNE_1788 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D HNE_3477 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D HNE_1787 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D HNE_3474 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HNE_3476 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HNE_0037 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D HNE_3400 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D HNE_0659 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D HNE_2968 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HNE_0652 aminotransferase, classes I and II K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HNE_1125 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_0095 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_2357 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_1395 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:hne00410]
D HNE_1379 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HNE_1126 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D HNE_0672 Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HNE_1828 mmsA1; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D HNE_2176 mmsA2; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:hne00430]
D HNE_2791 ggt1; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HNE_3148 ggt2; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HNE_0971 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HNE_3105 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D HNE_1810 metallo-beta-lactamase family protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:hne00450]
D HNE_1418 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HNE_1212 Cys/Met metabolism PLP-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D HNE_3448 mdeA; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D HNE_2614 cysteine desulfurase, SufS family K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HNE_0548 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HNE_0776 cysNC; sulfate adenylyltransferase, large subunit/adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HNE_0777 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HNE_2490 pyridine nucleotide-disulphide oxidoreductase / selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HNE_2489 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HNE_1831 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:hne00460]
D HNE_2446 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HNE_2791 ggt1; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HNE_3148 ggt2; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HNE_3324 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HNE_1675 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HNE_2060 glyA; serine hydroxymethyl transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:hne00470]
D HNE_2417 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HNE_0725 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HNE_3117 putative D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D HNE_0393 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HNE_1937 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D HNE_2992 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HNE_3026 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HNE_1610 mandelate racemase/muconate lactonizing enzyme family protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D HNE_2922 mandelate racemase/muconate lactonizing enzyme family protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D HNE_3529 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HNE_3463 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HNE_1940 oxidoreductase, FAD-binding K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D HNE_2416 dadA; D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:hne00480]
D HNE_2791 ggt1; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HNE_3148 ggt2; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HNE_2125 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D HNE_2124 allophanate hydrolase, subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D HNE_2123 allophanate hydrolase, subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D HNE_1374 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HNE_0301 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D HNE_2273 peptidase, M17 (leucyl aminopeptidase) family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HNE_3007 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HNE_2244 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HNE_2911 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HNE_2391 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_2762 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_2960 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_3104 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_3110 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_3237 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_0050 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_0324 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_1014 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_1223 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_0132 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_0707 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D HNE_1177 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HNE_1738 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HNE_3064 glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D HNE_1052 antioxidant, AhpC/TSA family K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D HNE_2991 decarboxylase, group IV K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D HNE_0383 putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis [PATH:hne00540]
D HNE_1779 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HNE_0389 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HNE_1778 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HNE_1780 conserved hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HNE_1781 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HNE_0700 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HNE_1024 sugar isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HNE_0806 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HNE_2908 putative 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HNE_0701 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HNE_0699 bacterial lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HNE_3125 conserved hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D HNE_1799 rfaE; rfaE bifunctional protein K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D HNE_0490 D,D-heptose 1,7-bisphosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hne00541]
D HNE_1147 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HNE_3236 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HNE_2639 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D HNE_0789 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HNE_0790 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HNE_0779 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D HNE_0791 putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D HNE_0780 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D HNE_0775 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D HNE_0793 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HNE_0794 putative GDP-6-deoxy-D-lyxo-4-hexulose reductase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D HNE_0705 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:hne00550]
D HNE_1344 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HNE_0397 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HNE_3022 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HNE_1136 putative UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HNE_3026 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HNE_3029 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diamino-pimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HNE_0393 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HNE_3028 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HNE_1772 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HNE_0091 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HNE_3027 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HNE_3024 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HNE_3102 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HNE_1911 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HNE_0768 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HNE_3002 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HNE_2934 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HNE_3030 putative penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HNE_1814 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HNE_0402 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:hne00552]
D HNE_0091 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:hne00543]
D HNE_1850 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HNE_2651 bacterial sugar transferase K16566 exoY; exopolysaccharide production protein ExoY
D HNE_2648 putative glycosyl transferase ExoA K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D HNE_1195 putative glycosyl transferase K16558 exoL; succinoglycan biosynthesis protein ExoL [EC:2.-.-.-]
D HNE_1198 acyltransferase family protein K16568 exoZ; exopolysaccharide production protein ExoZ
D HNE_1403 glycosyl transferase, group 2 family protein K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-]
D HNE_1201 glycosyl transferase, group 2 family protein K16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:hne00730]
D HNE_3338 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D HNE_3234 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HNE_2620 class-V pyridoxal-phosphate-dependent aminotransferase, NifS/IscS family K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HNE_2691 putative glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D HNE_1838 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HNE_2246 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D HNE_3553 thiamine monophosphate synthase family protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HNE_3185 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HNE_1157 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D HNE_3483 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HNE_2830 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HNE_1256 hypothetical protein K20895 ylmB; formylaminopyrimidine deformylase [EC:3.5.1.-]
C 00740 Riboflavin metabolism [PATH:hne00740]
D HNE_2056 ribAB; riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HNE_2058 riboflavin biosynthesis protein RibD C-terminal domain protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HNE_2055 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D HNE_2057 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D HNE_0844 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HNE_0216 Ser/Thr protein phosphatase family protein K14379 ACP5; tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2]
D HNE_1216 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:hne00750]
D HNE_0824 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D HNE_3128 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HNE_2151 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D HNE_0875 pdxJ; pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D HNE_1045 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:hne00760]
D HNE_0690 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HNE_0692 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D HNE_0689 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D HNE_1929 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HNE_3430 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HNE_2004 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HNE_0664 hydrolase, NUDIX family K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D HNE_2577 nadE; glutamine-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D HNE_2017 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D HNE_2165 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D HNE_0882 transcriptional regulator, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D HNE_2064 ppnK; ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D HNE_1139 pntAB; NAD(P) transhydrogenase, alpha subunit part 2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HNE_1140 pntAA; NAD(P) transhydrogenase, alpha subunit part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HNE_1138 pntB; NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D HNE_1116 isochorismatase family protein K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D HNE_2325 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:hne00770]
D HNE_0451 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_2501 putative acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_0865 putative benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_2213 thiamine pyrophosphate-dependent enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HNE_0449 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HNE_0447 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HNE_1411 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HNE_0771 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D HNE_1126 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D HNE_1760 putative transcriptional activator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D HNE_3268 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D HNE_2004 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HNE_2759 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HNE_0004 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HNE_0876 holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HNE_2045 putative 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D HNE_3091 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_3205 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_2367 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_1379 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:hne00780]
D HNE_2156 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HNE_0974 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2158 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2812 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2754 NAD dependent epimerase/dehydratase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2076 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2205 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_3436 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D HNE_1248 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HNE_1590 putative serine C-palmitoyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HNE_1247 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HNE_1249 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D HNE_0048 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D HNE_1759 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:hne00785]
D HNE_1062 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D HNE_2021 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D HNE_1974 lpdA1; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3262 lpdA2; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_2995 pyruvate dehydrogenase E1 component homolog K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HNE_1977 pdhA; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HNE_1976 pdhB; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HNE_1975 pdhC; pyruvate dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HNE_0312 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D HNE_0313 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HNE_2721 glycine cleavage system P-protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D HNE_2722 glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D HNE_2719 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HNE_2720 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:hne00790]
D HNE_3203 folE2; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D HNE_3483 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HNE_2455 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D HNE_3501 phoD2; alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D HNE_0308 alkaline phosphatase homolog K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D HNE_1260 phoD1; alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D HNE_2365 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D HNE_2364 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D HNE_2366 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D HNE_0463 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HNE_3472 putative folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HNE_2056 ribAB; riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HNE_2368 pabA; 4-amino-4-deoxychorismate synthase, glutamine amidotransferase subunit K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D HNE_2369 pabB; 4-amino-4-deoxychorismate synthase, aminodeoxychorismate synthase subunit K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D HNE_0533 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D HNE_3096 putative pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D HNE_1395 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D HNE_0532 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HNE_0531 exsB; exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HNE_2538 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HNE_1855 folE1; GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D HNE_1557 moaA2; molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HNE_1069 moaA1; molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HNE_1552 moaC2; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HNE_1065 moaC1; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HNE_1067 moaE1; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HNE_1550 moaE2; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HNE_1551 moaB2; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HNE_1066 moaB1; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HNE_1553 moeA1; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D HNE_1574 moeA2; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:hne00670]
D HNE_0463 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HNE_3316 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HNE_3253 putative FolD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HNE_2060 glyA; serine hydroxymethyl transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HNE_2264 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HNE_3372 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HNE_0513 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HNE_2719 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D HNE_0459 thyB; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HNE_0787 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D HNE_2103 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HNE_2602 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:hne00860]
D HNE_2062 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D HNE_1783 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HNE_2579 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HNE_2418 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HNE_0898 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HNE_3227 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D HNE_3228 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D HNE_3568 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D HNE_0349 hemF; coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D HNE_0554 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D HNE_3566 putative membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D HNE_3567 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D HNE_0322 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D HNE_2230 cobA; uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HNE_1040 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HNE_2318 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HNE_3494 cobS; cobaltochelatase, CobS subunit K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D HNE_3493 cobT; cobaltochelatase, CobT subunit K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D HNE_3460 putative ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HNE_1513 cobO; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HNE_2169 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D HNE_1519 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D HNE_1520 putative threonine-phosphate decarboxylase CobC K02225 cobC1; cobalamin biosynthesis protein CobC
D HNE_1521 cobU; Cobinamide kinase / cobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D HNE_1511 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D HNE_1510 putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D HNE_2095 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D HNE_1512 phosphoglycerate mutase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D HNE_3076 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hne00130]
D HNE_1368 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D HNE_0617 ubiG; ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D HNE_3543 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D HNE_3273 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D HNE_2900 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:hne00900]
D HNE_1838 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HNE_1774 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D HNE_2014 ispDF; IspD/IspF bifunctional enzyme K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D HNE_0676 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D HNE_0621 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D HNE_2713 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D HNE_2706 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3065 acetyl-CoA acetyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3133 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0758 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0959 bktB; beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0984 conserved hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_1839 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D HNE_0678 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HNE_1772 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:hne00906]
D HNE_0697 conserved domain protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:hne00903]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HNE_1554 limonene-1,2-epoxide hydrolase K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8]
C 00907 Pinene, camphor and geraniol degradation [PATH:hne00907]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D HNE_0672 Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HNE_1080 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D HNE_3374 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HNE_3455 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
D HNE_3461 metallo-beta-lactamase family protein K05555 actIV; cyclase [EC:4.-.-.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:hne00523]
D HNE_0789 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HNE_0790 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HNE_0779 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D HNE_0791 putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D HNE_0780 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D HNE_0317 putative chorismate mutase, type II K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:hne01055]
D HNE_2118 FMN-dependent alpha-hydroxy acid dehydrogenase family protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D HNE_0790 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HNE_2384 putative glycosyl transferase K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:hne00946]
D HNE_2446 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D HNE_1940 oxidoreductase, FAD-binding K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
C 00332 Carbapenem biosynthesis [PATH:hne00332]
D HNE_2567 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HNE_3429 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:hne00261]
D HNE_2118 FMN-dependent alpha-hydroxy acid dehydrogenase family protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D HNE_0776 cysNC; sulfate adenylyltransferase, large subunit/adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HNE_0777 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HNE_1643 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HNE_0618 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HNE_0061 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HNE_2800 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HNE_0437 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:hne00521]
D HNE_1741 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D HNE_3238 putative phosphoglucomutase/phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D HNE_3187 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HNE_1365 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HNE_0789 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HNE_0790 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HNE_0779 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D HNE_0791 putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D HNE_0780 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D HNE_1741 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:hne00525]
D HNE_0789 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HNE_0790 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:hne00401]
D HNE_3400 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D HNE_2968 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HNE_0652 aminotransferase, classes I and II K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HNE_1125 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_0095 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_2357 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D HNE_1790 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HNE_1789 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D HNE_2160 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HNE_0974 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2158 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2812 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2754 NAD dependent epimerase/dehydratase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2076 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2205 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_3436 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:hne00998]
D HNE_2157 acpP3; acyl carrier protein K02078 acpP; acyl carrier protein
D HNE_1591 acpP1; acyl carrier protein K02078 acpP; acyl carrier protein
D HNE_1409 pyridoxal-phosphate-dependent enzyme K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:hne00999]
D HNE_0786 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HNE_0003 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D HNE_2446 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D HNE_1409 pyridoxal-phosphate-dependent enzyme K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:hne00362]
D HNE_0019 carboxymuconolactone decarboxylase domain protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D HNE_0672 Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D HNE_3469 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D HNE_2706 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3065 acetyl-CoA acetyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3133 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0758 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0959 bktB; beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0984 conserved hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:hne00627]
D HNE_3188 conserved hypothetical protein K10215 ethA; monooxygenase [EC:1.14.13.-]
D HNE_1334 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1220 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1113 hydrolase, carbon-nitrogen family K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_0817 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1602 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:hne00364]
D HNE_0527 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:hne00625]
D HNE_0985 dhlA; haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D HNE_0560 S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_3486 alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_3109 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HNE_3351 HAD hydrolase, IA family K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:hne00361]
D HNE_0985 dhlA; haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D HNE_0527 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D HNE_3351 HAD hydrolase, IA family K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:hne00623]
D HNE_1493 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D HNE_2119 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D HNE_0527 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:hne00622]
D HNE_1493 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D HNE_2119 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:hne00643]
D HNE_1992 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D HNE_2896 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D HNE_1334 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1220 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1113 hydrolase, carbon-nitrogen family K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_0817 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D HNE_1602 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:hne00930]
D HNE_1952 putative isonitrile hydratase K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D HNE_0464 putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D HNE_2810 acyl-CoA dehydrogenase K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D HNE_0566 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D HNE_0672 Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:hne00626]
D HNE_0560 S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D HNE_3486 alcohol dehydrogenase, class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
D HNE_1255 flavin reductase family protein K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hne03020]
D HNE_2858 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HNE_2857 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HNE_2827 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HNE_0872 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hne03010]
D HNE_0192 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HNE_1768 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HNE_2845 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HNE_1956 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HNE_2834 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HNE_2161 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HNE_2855 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HNE_2837 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HNE_2315 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HNE_2852 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HNE_2828 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HNE_2856 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HNE_2829 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HNE_2838 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HNE_3442 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HNE_0038 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HNE_2842 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HNE_2162 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HNE_2847 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HNE_0565 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HNE_3162 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HNE_2864 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HNE_2848 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HNE_2851 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HNE_2850 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HNE_2839 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HNE_2836 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HNE_2859 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HNE_2163 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HNE_2860 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HNE_2865 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HNE_2316 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HNE_2841 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HNE_2832 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HNE_2844 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HNE_2826 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HNE_2835 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HNE_0046 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HNE_0431 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HNE_2559 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HNE_2846 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HNE_2849 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HNE_2840 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HNE_1397 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D HNE_2560 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HNE_3498 rpmB; 50S ribosomal protein K02902 RP-L28; large subunit ribosomal protein L28
D HNE_2843 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HNE_2833 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HNE_3193 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HNE_1981 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HNE_2282 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HNE_0412 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HNE_0430 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HNE_3350 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HNE_2659 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HNE_2656 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HNE_2655 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hne00970]
D HNE_2657 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HNE_0197 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HNE_3145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HNE_2575 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HNE_0224 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HNE_3447 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HNE_1682 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HNE_1425 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HNE_1680 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HNE_2637 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HNE_1967 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HNE_2599 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HNE_2683 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HNE_1000 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HNE_1999 tRNA-His K14226 tRNA-His; tRNA His
D HNE_2658 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HNE_2078 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HNE_0963 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HNE_3222 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HNE_1063 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HNE_1595 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HNE_1132 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HNE_0545 tRNA-Met K14230 tRNA-Met; tRNA Met
D HNE_2654 tRNA-Met K14230 tRNA-Met; tRNA Met
D HNE_1022 tRNA-Met K14230 tRNA-Met; tRNA Met
D HNE_1730 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HNE_3046 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HNE_1165 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HNE_2573 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HNE_2738 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HNE_1816 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HNE_2557 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HNE_2238 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HNE_3478 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HNE_1341 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HNE_3231 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HNE_1829 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HNE_1736 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HNE_2685 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HNE_0978 tRNA-Val K14237 tRNA-Val; tRNA Val
D HNE_0703 tRNA-Val K14237 tRNA-Val; tRNA Val
D HNE_0232 tRNA-Val K14237 tRNA-Val; tRNA Val
D HNE_2487 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D HNE_1783 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HNE_2579 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HNE_2293 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HNE_2291 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HNE_2299 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HNE_2741 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HNE_2257 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HNE_0683 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HNE_0685 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HNE_3196 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HNE_1930 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HNE_2489 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HNE_3201 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HNE_1831 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HNE_0513 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HNE_1676 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HNE_3557 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HNE_0849 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HNE_3072 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D HNE_2715 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HNE_1764 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HNE_0577 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HNE_0433 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HNE_0435 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HNE_2625 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HNE_0520 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:hne03060]
D HNE_2831 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HNE_2001 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HNE_1793 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HNE_1926 secD1; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HNE_1925 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HNE_2378 secD2; protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D HNE_1927 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HNE_0414 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HNE_3176 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HNE_0006 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HNE_0036 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HNE_3526 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HNE_1934 tatA2; twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D HNE_1933 tatA1; twin-arginine translocation protein TatA K03117 tatB; sec-independent protein translocase protein TatB
D HNE_1932 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D HNE_1842 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HNE_1728 lspA2; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HNE_0850 lspA1; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:hne04122]
D HNE_2620 class-V pyridoxal-phosphate-dependent aminotransferase, NifS/IscS family K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HNE_1419 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D HNE_0641 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HNE_1067 moaE1; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HNE_1550 moaE2; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HNE_1557 moaA2; molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HNE_1069 moaA1; molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HNE_1548 putative molybdopterin converting factor K03636 moaD; sulfur-carrier protein
D HNE_1068 putative molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D HNE_3431 putative molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D HNE_1552 moaC2; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HNE_1065 moaC1; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HNE_1551 moaB2; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HNE_1066 moaB1; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HNE_2247 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:hne03018]
D HNE_3207 hydrolase, NUDIX family K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D HNE_0673 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D HNE_1732 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HNE_1980 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HNE_3441 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HNE_1118 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HNE_2280 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HNE_0553 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HNE_0541 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HNE_2532 ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HNE_3565 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HNE_1761 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HNE_3321 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HNE_1962 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HNE_2006 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HNE_2260 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HNE_0346 tRNA nucleotidyltransferase/poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hne03030]
D HNE_0005 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HNE_1767 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HNE_0372 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HNE_1812 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HNE_3559 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HNE_2272 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HNE_0563 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HNE_2164 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HNE_2889 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HNE_2764 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HNE_0945 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HNE_2755 rnhB; ribonuclease HIII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HNE_1412 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HNE_0386 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:hne03410]
D HNE_2040 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HNE_1914 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HNE_3274 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HNE_3393 putative DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D HNE_0860 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HNE_2611 conserved hypothetical protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D HNE_2792 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D HNE_1908 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D HNE_3549 putative exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HNE_1935 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HNE_1412 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HNE_1968 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HNE_0386 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:hne03420]
D HNE_1985 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HNE_2765 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HNE_3045 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HNE_2966 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HNE_2938 putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HNE_1412 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HNE_0386 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:hne03430]
D HNE_0297 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HNE_0913 putative DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D HNE_2938 putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HNE_0920 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HNE_1840 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HNE_1968 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HNE_2764 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HNE_1767 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HNE_0563 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HNE_0372 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HNE_3559 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HNE_1812 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HNE_0005 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HNE_2272 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HNE_0386 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:hne03440]
D HNE_1968 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HNE_2764 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HNE_0561 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HNE_0879 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HNE_0370 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HNE_2742 recA; recA protein K03553 recA; recombination protein RecA
D HNE_1412 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HNE_0146 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HNE_0147 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HNE_0145 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HNE_1987 putative ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HNE_1767 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HNE_0563 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HNE_0372 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HNE_3559 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HNE_1812 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HNE_0005 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HNE_2272 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HNE_1896 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:hne02010]
D HNE_2693 ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HNE_2694 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D HNE_2695 iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HNE_2106 toluene tolerance protein, Ttg2 family K07323 mlaC; phospholipid transport system substrate-binding protein
D HNE_2138 toluene tolerance protein, Ttg2 family K07323 mlaC; phospholipid transport system substrate-binding protein
D HNE_2919 virulence factor Mce homolog K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HNE_2253 mammalian cell entry protein homolog K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HNE_2921 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HNE_0724 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HNE_2920 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HNE_0723 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HNE_2990 putative phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HNE_2032 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D HNE_2031 pstA; phosphate ABC transporter, permease protein PtsA K02038 pstA; phosphate transport system permease protein
D HNE_2030 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HNE_2459 phnD; phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HNE_2461 phnE; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D HNE_2460 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HNE_2874 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HNE_2879 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HNE_2880 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HNE_0172 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HNE_0795 lipopolysaccharide ABC transporter, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D HNE_0796 lipopolysaccharide ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D HNE_1765 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D HNE_1766 lipoprotein releasing system, ATP-binding protein, homolog K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HNE_3517 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D HNE_3516 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D HNE_3515 ccmA; heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D HNE_2274 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D HNE_1586 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D HNE_2275 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D HNE_1587 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D HNE_0205 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HNE_3391 putative permease K09811 ftsX; cell division transport system permease protein
D HNE_3390 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HNE_1366 efflux ABC transporter, permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D HNE_1242 efflux ABC transporter, heavy metal transporter (HMT) family (ABCB), permease/ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D HNE_3241 putative multidrug ABC transporter, permease/ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D HNE_1661 putative amino acid ABC transporter, ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HNE_1660 amino acid ABC transporter, permease/ATP-binding protein CydD, putaive K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HNE_1647 putative macrolide efflux ABC transporter, permease/ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:hne02060]
D HNE_0439 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D HNE_0438 PTS system IIA component, mannose/fructose/sorbose (Man) family K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HNE_0619 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D HNE_3289 sugar transporter, PTS fructose-mannitol (Fru) family K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:hne03070]
D HNE_1678 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D HNE_1865 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D HNE_2514 type II secretion system protein K02453 gspD; general secretion pathway protein D
D HNE_1864 gspC; general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D HNE_1867 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D HNE_2518 bacterial type II secretion system protein F K02455 gspF; general secretion pathway protein F
D HNE_1868 gspG1; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D HNE_2516 gspG2; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D HNE_1869 gspH; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D HNE_1870 gspI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D HNE_1871 gspJ; general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D HNE_1872 gspK; general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D HNE_1873 gspL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D HNE_1874 gspM; general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D HNE_1866 gspE; general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HNE_2517 type II secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HNE_1926 secD1; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HNE_2378 secD2; protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D HNE_1925 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HNE_2001 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HNE_1793 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HNE_2831 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HNE_1927 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HNE_0414 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HNE_3176 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HNE_3526 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HNE_0006 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HNE_0036 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HNE_1934 tatA2; twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D HNE_1933 tatA1; twin-arginine translocation protein TatA K03117 tatB; sec-independent protein translocase protein TatB
D HNE_1932 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D HNE_1445 TraG/TraD family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D HNE_1622 TraG/TraD family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:hne02020]
D HNE_3058 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HNE_2028 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D HNE_3483 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HNE_2455 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D HNE_3501 phoD2; alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D HNE_0308 alkaline phosphatase homolog K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D HNE_1260 phoD1; alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D HNE_2990 putative phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HNE_3094 sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HNE_3093 ompR; DNA-binding response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D HNE_0472 protease, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D HNE_1313 protease, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D HNE_2189 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D HNE_2188 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D HNE_1692 conserved hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D HNE_1694 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D HNE_1693 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D HNE_0264 flagellin Laf1 K02406 fliC; flagellin
D HNE_0253 putative chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D HNE_3347 chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D HNE_2318 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HNE_0564 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HNE_1404 chvG; sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D HNE_1408 chvI; DNA-binding response regulator ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D HNE_0394 conserved hypothetical protein K19611 fepA; ferric enterobactin receptor
D HNE_3534 citE; citrate lyase, beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D HNE_1097 HpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D HNE_1560 narG; nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D HNE_1561 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D HNE_1564 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D HNE_1562 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D HNE_0411 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D HNE_0086 spore coat family protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HNE_0089 putative lipoprotein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HNE_0087 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D HNE_2496 putative fimbrial assembly protein K07346 fimC; fimbrial chaperone protein
D HNE_0088 fimbrial usher protein K07347 fimD; outer membrane usher protein
D HNE_2495 fimbrial usher protein K07347 fimD; outer membrane usher protein
D HNE_3017 flp/fap pilus protein K02651 flp; pilus assembly protein Flp/PilA
D HNE_3172 flp/fap pilus protein K02651 flp; pilus assembly protein Flp/PilA
D HNE_1149 putative Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D HNE_3015 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D HNE_1150 type II/III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D HNE_3014 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D HNE_1152 putative pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D HNE_3012 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D HNE_1153 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HNE_3011 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HNE_3010 secretion system protein K12510 tadB; tight adherence protein B
D HNE_1154 putative Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D HNE_3009 type II secretion system protein K12511 tadC; tight adherence protein C
D HNE_1155 putative Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D HNE_0760 conserved hypothetical protein K27080 tadG; tight adherence protein G
D HNE_0518 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D HNE_2083 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D HNE_2012 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HNE_2011 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D HNE_2084 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HNE_2010 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D HNE_2009 ntrX; sigma-54 dependent DNA-binding response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D HNE_2706 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3065 acetyl-CoA acetyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3133 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0758 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0959 bktB; beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0984 conserved hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0206 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D HNE_0640 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HNE_0639 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HNE_2910 pleC; non-motile and phage-resistance protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D HNE_2284 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D HNE_0746 putative sensor histidine kinase DivJ K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D HNE_2285 cell division response regulator DivK K11443 divK; two-component system, cell cycle response regulator DivK
D HNE_0507 putative sensor histidine kinase/response regulator CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D HNE_0638 conserved hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D HNE_0944 ctrA; DNA-binding response regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
D HNE_0229 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D HNE_1234 fixL; sensory box sensor histidine kinase FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D HNE_1235 fixJ; DNA-binding response regulator FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D HNE_1469 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HNE_3398 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D HNE_3399 regA; DNA-binding response regulator RegA K15012 regA; two-component system, response regulator RegA
D HNE_0350 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D HNE_0351 putative ubiquinol-cytochrome c reductase, cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HNE_0352 putative ubiquinol-cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D HNE_0912 cytochrome c family protein K08738 CYC; cytochrome c
D HNE_0658 cytochrome c family protein K08738 CYC; cytochrome c
D HNE_1232 ccoN; cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D HNE_1231 ccoO; cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D HNE_1230 ccoQ; cytochrome c oxidase, cbb3-type, CcoQ subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D HNE_1229 ccoP; cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D HNE_1659 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HNE_1658 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HNE_1657 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D HNE_1678 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D HNE_2650 polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D HNE_0219 sigma factor regulatory protein, FecR/PupR family K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:hne04148]
D HNE_2991 decarboxylase, group IV K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D HNE_0350 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:hne02024]
D HNE_2006 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HNE_1790 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HNE_1789 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HNE_0709 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HNE_1721 type IV secretion system protein TrbG family protein K20532 trbG; type IV secretion system protein TrbG
D HNE_1720 type IV secretion system protein TrbI family protein K20533 trbI; type IV secretion system protein TrbI
D HNE_3377 metallo-beta-lactamase family lipoprotein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D HNE_1469 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HNE_0655 transcriptional regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D HNE_2058 riboflavin biosynthesis protein RibD C-terminal domain protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HNE_1648 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D HNE_3059 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D HNE_2874 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HNE_2879 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HNE_2880 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HNE_0172 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HNE_0414 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HNE_3412 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D HNE_2378 secD2; protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D HNE_2001 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HNE_1793 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HNE_2831 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HNE_1927 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HNE_3176 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HNE_3526 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HNE_0006 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HNE_0036 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:hne02030]
D HNE_0639 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HNE_0640 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HNE_1392 putative flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HNE_0246 putative flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D HNE_1394 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HNE_0244 putative flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HNE_0253 putative chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D HNE_3347 chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D HNE_0251 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D HNE_0894 putative chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:hne02040]
D HNE_0271 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HNE_0242 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HNE_1392 putative flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HNE_0246 putative flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D HNE_0268 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HNE_0261 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D HNE_0241 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HNE_0259 hypothetical protein K02415 fliL; flagellar protein FliL
D HNE_1394 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HNE_0244 putative flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HNE_0245 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HNE_0272 fliQ; flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HNE_0274 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HNE_0273 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HNE_0275 FlhB/HrpN/YscU/SpaS family protein K02401 flhB; flagellar biosynthesis protein FlhB
D HNE_0257 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HNE_0269 putative flagellar protein K02387 flgB; flagellar basal-body rod protein FlgB
D HNE_0270 flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D HNE_0260 putative basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HNE_0250 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D HNE_0255 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HNE_0256 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HNE_0258 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HNE_0247 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HNE_0262 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D HNE_0249 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HNE_0248 putative flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HNE_0264 flagellin Laf1 K02406 fliC; flagellin
D HNE_0253 putative chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D HNE_3347 chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D HNE_0251 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D HNE_0894 putative chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D HNE_2888 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HNE_0206 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HNE_1980 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:hne04980]
D HNE_3460 putative ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HNE_1326 mutB; methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D HNE_1327 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:hne01501]
D HNE_0295 putative muropeptide permease AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HNE_0337 transporter, peptide-acetyl-coenzyme A transporter (PAT) family K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HNE_2048 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HNE_0411 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D HNE_2874 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HNE_2879 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HNE_2880 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HNE_0172 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HNE_2906 peptidase, M56 family K02172 blaR1; bla regulator protein blaR1
D HNE_2905 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D HNE_0212 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HNE_2191 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HNE_0211 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D HNE_1648 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D HNE_3059 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D HNE_1678 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D HNE_1911 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HNE_0768 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HNE_2934 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HNE_3030 putative penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HNE_2763 putative beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:hne01502]
D HNE_0393 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HNE_2417 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HNE_0725 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HNE_3028 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HNE_3027 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HNE_3024 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hne01503]
D HNE_0674 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HNE_0472 protease, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D HNE_1313 protease, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D HNE_0212 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HNE_2191 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HNE_0211 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D HNE_1678 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D HNE_1779 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hne01000]
C 01001 Protein kinases [BR:hne01001]
D HNE_1631 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HNE_1246 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HNE_1496 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HNE_2144 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HNE_1636 protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D HNE_1194 chain length determinant family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D HNE_3058 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HNE_3094 sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HNE_2189 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D HNE_1404 chvG; sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D HNE_2012 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HNE_2010 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D HNE_2910 pleC; non-motile and phage-resistance protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D HNE_0746 putative sensor histidine kinase DivJ K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D HNE_0507 putative sensor histidine kinase/response regulator CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D HNE_1234 fixL; sensory box sensor histidine kinase FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D HNE_3398 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:hne01009]
D HNE_0788 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HNE_0453 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:hne01002]
D HNE_1728 lspA2; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HNE_0850 lspA1; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HNE_2653 gspO; prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HNE_3016 pilus assembly protein CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D HNE_1808 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HNE_0717 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HNE_0093 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HNE_0778 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HNE_1075 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D HNE_1952 putative isonitrile hydratase K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D HNE_0710 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein
D HNE_2911 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HNE_1947 angiotensin-converting enzyme family protein K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D HNE_3288 dcp; peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D HNE_3062 peptidase, M13 family K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D HNE_1330 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HNE_0852 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D HNE_0853 peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D HNE_2273 peptidase, M17 (leucyl aminopeptidase) family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HNE_3007 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HNE_2244 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HNE_1970 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D HNE_1997 peptidase, M20/M25/M40 family K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D HNE_0614 peptidase, M20/M25/M40 family K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D HNE_0953 map1; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HNE_1332 map2; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HNE_0381 peptidase, M24 family K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HNE_0158 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HNE_3367 peptidase, M48B family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HNE_0650 peptidase, M48 family K23010 OMA1; metalloendopeptidase OMA1, mitochondrial [EC:3.4.24.-]
D HNE_1775 peptidase, M50 family K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HNE_2906 peptidase, M56 family K02172 blaR1; bla regulator protein blaR1
D HNE_0472 protease, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D HNE_1313 protease, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D HNE_3412 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D HNE_0034 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D HNE_1217 dipeptidyl aminopeptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D HNE_2146 ptrB; protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D HNE_1167 peptidase, S9A family K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D HNE_1814 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HNE_0402 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HNE_0542 putative ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HNE_2087 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HNE_0977 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HNE_1786 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HNE_1842 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HNE_2930 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D HNE_2413 putative epoxide hydrolase K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
D HNE_3209 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HNE_2638 sppA; signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D HNE_1137 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D HNE_2033 hslV; ATP-dependent protease HslVU K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D HNE_3324 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HNE_1675 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D HNE_2791 ggt1; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HNE_3148 ggt2; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D HNE_1364 pmbA; pmbA protein K03592 pmbA; PmbA protein
D HNE_1034 tldD; TldD protein K03568 tldD; TldD protein
D HNE_3003 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin
D HNE_0470 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D HNE_0469 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:hne01003]
D HNE_2077 putative membrane protein K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D HNE_3102 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HNE_3002 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HNE_1911 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HNE_0768 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HNE_2376 mdoH; periplasmic glucan biosynthesis protein K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D HNE_2648 putative glycosyl transferase ExoA K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D HNE_1195 putative glycosyl transferase K16558 exoL; succinoglycan biosynthesis protein ExoL [EC:2.-.-.-]
D HNE_1403 glycosyl transferase, group 2 family protein K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-]
D HNE_1201 glycosyl transferase, group 2 family protein K16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-]
D HNE_3194 glycosyl transferase, group 2 family protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D HNE_1575 otsA; UDP-forming alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:hne01005]
D HNE_1779 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HNE_1781 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HNE_0389 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HNE_1778 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HNE_1780 conserved hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HNE_0700 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HNE_0699 bacterial lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HNE_0701 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HNE_3125 conserved hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D HNE_0806 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HNE_2908 putative 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HNE_1024 sugar isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HNE_0490 D,D-heptose 1,7-bisphosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D HNE_1799 rfaE; rfaE bifunctional protein K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hne01011]
D HNE_1344 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HNE_0397 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HNE_3022 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HNE_1136 putative UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HNE_3026 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HNE_3029 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diamino-pimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HNE_0393 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HNE_2417 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HNE_0725 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HNE_2992 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HNE_1137 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D HNE_3027 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HNE_3024 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HNE_0091 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HNE_0519 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D HNE_1911 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HNE_0768 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HNE_3002 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D HNE_2934 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HNE_3030 putative penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HNE_1814 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HNE_0402 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HNE_3102 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HNE_1330 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HNE_2801 transglycosylase, Slt family K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HNE_0008 putative transglycosylase MltA K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D HNE_3349 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D HNE_2155 conserved hypothetical protein TIGR00247 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D HNE_1815 rlpA; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HNE_0674 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:hne01004]
D HNE_2160 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HNE_1162 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HNE_2380 putative 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HNE_2156 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HNE_0974 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2158 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2812 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2754 NAD dependent epimerase/dehydratase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2076 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_2205 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HNE_3435 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D HNE_3436 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D HNE_2786 trans-2-enoyl-ACP reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HNE_3287 fabK; trans-2-enoyl-ACP reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HNE_2571 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D HNE_1402 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HNE_2570 vlacs; very-long-chain acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D HNE_1593 putative AMP binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D HNE_1161 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HNE_2147 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HNE_3392 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HNE_2608 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:hne01008]
D HNE_1818 oxidoreductase, 2-nitropropane dioxygenase family K15329 pksE; trans-AT polyketide synthase, acyltransferase and oxidoreductase domains
D HNE_3461 metallo-beta-lactamase family protein K05555 actIV; cyclase [EC:4.-.-.-]
D HNE_2384 putative glycosyl transferase K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310]
D HNE_2118 FMN-dependent alpha-hydroxy acid dehydrogenase family protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:hne01006]
D HNE_1839 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D HNE_0678 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HNE_1772 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HNE_0697 conserved domain protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D HNE_0452 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HNE_1368 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D HNE_1040 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:hne01007]
D HNE_3072 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D HNE_1783 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HNE_2579 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HNE_3481 aminoacyl-tRNA synthetase class I family protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HNE_2625 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HNE_0520 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HNE_3201 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HNE_2715 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HNE_1831 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HNE_0849 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HNE_1676 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HNE_3557 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HNE_2257 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HNE_0577 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HNE_0683 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HNE_0685 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HNE_1930 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HNE_1764 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HNE_3196 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HNE_2741 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HNE_0433 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HNE_0435 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HNE_2968 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HNE_0652 aminotransferase, classes I and II K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HNE_2311 aminotransferase, classes I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D HNE_1125 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_0095 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_2357 aminotransferase, classes I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HNE_2062 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D HNE_1248 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HNE_1590 putative serine C-palmitoyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HNE_0580 argD; acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HNE_1640 ectB; diaminobutyrate-2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D HNE_1247 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HNE_2418 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HNE_3117 putative D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D HNE_3091 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_3205 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_2367 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HNE_3128 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:hne00199]
C 00194 Photosynthesis proteins [BR:hne00194]
D HNE_1891 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HNE_1892 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HNE_1893 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HNE_1894 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HNE_1895 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HNE_1922 ATP synthase F0, B subunit family protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HNE_1921 ATP synthase F0, B subunit family protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HNE_1920 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HNE_1919 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HNE_1918 putative ATP synthase, subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:hne03000]
D HNE_3385 ada; ADA regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D HNE_0321 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HNE_1459 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HNE_3036 putative oxidative stress regulatory protein OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D HNE_1531 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D HNE_2216 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D HNE_1468 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D HNE_1121 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HNE_2393 putative histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D HNE_1111 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D HNE_1102 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D HNE_1655 putative transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D HNE_2206 transcriptional regulator, GntR family K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D HNE_2447 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D HNE_0025 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D HNE_2320 transcription regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D HNE_1537 transcriptional regulator, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D HNE_0182 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D HNE_2585 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D HNE_2502 transcriptional regulator, LuxR family K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D HNE_2193 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D HNE_3121 transcriptional regulator, MarR family K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D HNE_3520 transcriptional regulator, MarR family K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D HNE_2387 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D HNE_3364 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D HNE_1380 transcriptional regulator, MerR family K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D HNE_3426 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D HNE_0528 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D HNE_0655 transcriptional regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D HNE_1469 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HNE_1290 cyclic nucleotide-binding protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D HNE_1558 cyclic nucleotide binding protein K13642 ftrB; CRP/FNR family transcriptional regulator, transcriptional activator FtrB
D HNE_1541 putative transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D HNE_0993 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D HNE_1627 transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D HNE_2431 putative transcriptional regulator NolR K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D HNE_1237 DNA-binding protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D HNE_2905 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D HNE_1759 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HNE_1687 conserved hypothetical protein K07726 K07726; putative transcriptional regulator
D HNE_3312 DNA-binding protein K07727 K07727; putative transcriptional regulator
D HNE_3074 DNA-binding protein K07729 K07729; putative transcriptional regulator
D HNE_2988 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D HNE_1709 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D HNE_1487 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D HNE_0084 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D HNE_2530 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HNE_3560 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HNE_3419 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D HNE_3317 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D HNE_1119 conserved hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D HNE_3292 pspF; psp operon transcription activator K03974 pspF; psp operon transcriptional activator
D HNE_3296 pspC; phage shock protein C K03973 pspC; phage shock protein C
D HNE_2351 regulatory protein K06140 rnk; regulator of nucleoside diphosphate kinase
D HNE_1718 prophage CP4-57 regulatory protein AlpA family protein K07733 alpA; prophage regulatory protein
D HNE_0918 putative FMN-binding protein K07734 paiB; transcriptional regulator
D HNE_2332 conserved hypothetical protein K07734 paiB; transcriptional regulator
D HNE_1049 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D HNE_0503 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D HNE_2059 nrdR; transcriptional regulator, NrdR family K07738 nrdR; transcriptional repressor NrdR
D HNE_3033 putative MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:hne03021]
D HNE_2827 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HNE_2858 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HNE_2857 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HNE_0872 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HNE_2888 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HNE_0785 RNA polymerase sigma-70 factor, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HNE_1318 RNA polymerase sigma-70 factor, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HNE_1698 Sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HNE_3328 RNA polymerase sigma factor, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HNE_1358 RNA polymerase sigma-70 factor, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HNE_3450 putative alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D HNE_0330 rpoH; alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D HNE_0206 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D HNE_0112 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HNE_2054 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HNE_2000 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HNE_0503 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D HNE_0643 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D HNE_3565 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:hne03019]
D HNE_0673 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D HNE_1732 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HNE_0877 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HNE_1761 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HNE_2280 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HNE_1118 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D HNE_0553 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HNE_0541 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HNE_2532 ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HNE_1980 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HNE_3441 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HNE_3565 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HNE_3321 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HNE_1962 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HNE_2006 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HNE_2260 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HNE_0346 tRNA nucleotidyltransferase/poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D HNE_3207 hydrolase, NUDIX family K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D HNE_0401 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:hne03011]
D HNE_0192 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HNE_1768 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HNE_2845 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HNE_1956 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HNE_2834 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HNE_2161 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HNE_2855 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HNE_2837 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HNE_2315 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HNE_2852 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HNE_2828 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HNE_2856 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HNE_2829 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HNE_2838 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HNE_3442 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HNE_0038 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HNE_2842 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HNE_2162 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HNE_2847 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HNE_0565 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HNE_3162 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HNE_2864 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HNE_2848 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HNE_2851 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HNE_2850 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HNE_2839 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HNE_2836 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HNE_2163 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HNE_2860 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HNE_2865 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HNE_2859 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HNE_2316 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HNE_2841 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HNE_2832 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HNE_2844 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HNE_2826 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HNE_2835 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HNE_0046 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HNE_0431 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HNE_2559 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HNE_2846 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HNE_2849 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HNE_2840 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HNE_2560 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HNE_3498 rpmB; 50S ribosomal protein K02902 RP-L28; large subunit ribosomal protein L28
D HNE_2843 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HNE_2833 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HNE_3193 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HNE_1981 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HNE_2282 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HNE_0412 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HNE_0430 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HNE_3350 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HNE_1397 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D HNE_2655 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HNE_2659 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HNE_2656 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:hne03009]
D HNE_0877 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HNE_0878 era; GTP-binding protein Era K03595 era; GTPase
D HNE_2562 GTP-binding protein, GTP1/OBG family K03979 obgE; GTPase [EC:3.6.5.-]
D HNE_0503 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D HNE_0112 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HNE_2054 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HNE_2000 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HNE_0755 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HNE_2152 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HNE_1806 NOL1/NOP2/sun domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D HNE_3368 putative ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D HNE_0756 putative methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HNE_2778 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HNE_1369 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HNE_3562 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HNE_3032 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HNE_0763 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HNE_0818 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D HNE_2686 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HNE_1802 putative ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D HNE_0304 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HNE_2871 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D HNE_2091 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D HNE_3331 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HNE_2781 putative 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D HNE_0406 RNA pseudouridine synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HNE_0940 pseudouridine synthase rsuA family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HNE_1002 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D HNE_2640 pseudouridine synthase family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D HNE_3500 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HNE_1378 RNA pseudouridine synthase family protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D HNE_1844 Ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D HNE_0526 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HNE_3114 alpha-L-glutamate ligases, RimK family K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D HNE_0041 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D HNE_1951 RNA modification enzyme, MiaB family K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D HNE_0379 putative ribosomal protein L11 methyltransferase PrmA K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D HNE_0673 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D HNE_1732 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HNE_2300 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HNE_0553 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HNE_0774 engA; GTP-binding protein EngA K03977 engA; GTPase
D HNE_2005 putative GTP-binding protein HflX K03665 hflX; GTPase
D HNE_1848 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HNE_0873 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HNE_0115 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D HNE_0111 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D HNE_0303 iojap homolog K09710 ybeB; ribosome-associated protein
D HNE_0105 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D HNE_3290 conserved hypothetical protein K05808 hpf; ribosome hibernation promoting factor
D HNE_1924 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:hne03016]
D HNE_1292 metallo-beta-lactamase family protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D HNE_1783 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HNE_2579 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HNE_1764 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HNE_0849 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HNE_3557 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HNE_1831 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HNE_2715 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HNE_2257 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HNE_2741 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HNE_3196 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HNE_1930 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HNE_3201 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HNE_1676 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HNE_0577 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HNE_0433 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HNE_0435 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HNE_2625 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HNE_0520 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HNE_2290 histidine triad family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HNE_0109 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HNE_0515 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HNE_0117 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HNE_2620 class-V pyridoxal-phosphate-dependent aminotransferase, NifS/IscS family K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HNE_1848 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HNE_0452 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HNE_3564 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HNE_3563 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HNE_2490 pyridine nucleotide-disulphide oxidoreductase / selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HNE_0169 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D HNE_0413 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HNE_3315 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D HNE_2258 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D HNE_0202 putative exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D HNE_3221 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D HNE_3072 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D HNE_0683 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HNE_0685 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HNE_3481 aminoacyl-tRNA synthetase class I family protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HNE_0062 YbaK/prolyl-tRNA synthetase domain protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D HNE_2776 cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HNE_0293 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D HNE_2013 putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D HNE_0103 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D HNE_3527 tRNA-i(6)A37 thiotransferase enzyme MiaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D HNE_0314 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D HNE_1178 RNA methyltransferase, TrmH family K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D HNE_2768 gid; gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D HNE_0045 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HNE_2870 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D HNE_0406 RNA pseudouridine synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HNE_0641 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HNE_2769 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D HNE_2612 iscA; iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D HNE_0861 putative aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ
D HNE_3298 FAD dependent oxidoreductase domain protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D HNE_2757 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D HNE_0531 exsB; exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HNE_2538 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HNE_0533 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D HNE_0532 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HNE_1855 folE1; GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D HNE_3103 putative iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D HNE_2491 conserved hypothetical protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D HNE_1130 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HNE_0157 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HNE_0524 peptidase family M22, nonpeptidase homolog K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HNE_0136 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HNE_1887 conserved hypothetical protein TIGR00150 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HNE_2280 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HNE_3441 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:hne03012]
D HNE_0114 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HNE_0428 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HNE_2924 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D HNE_1769 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HNE_1734 tuf1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HNE_2853 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HNE_2854 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HNE_2488 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D HNE_0626 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HNE_1771 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HNE_0629 methyltransferase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HNE_1396 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HNE_1354 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HNE_3140 efp; translation elongation factor P K02356 efp; elongation factor P
D HNE_3139 tRNA synthetase, class II K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D HNE_1912 prfB; peptide chain release factor 2, programmed frameshift K02836 prfB; peptide chain release factor 2
D HNE_0752 putative peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D HNE_2699 peptidyl-tRNA hydrolase domain protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:hne03110]
D HNE_1030 clpA; ATP-dependent Clp protease, ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D HNE_0631 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HNE_2086 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HNE_2034 hslU; heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D HNE_3321 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HNE_0525 heat shock protein, Hsp70 family K04046 yegD; hypothetical chaperone protein
D HNE_1962 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HNE_0761 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HNE_0360 molecular chaperone, DnaJ family K05801 djlA; DnaJ like chaperone protein
D HNE_0594 hslO; 33 kDa chaperonin HslO K04083 hslO; molecular chaperone Hsp33
D HNE_3318 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HNE_0027 16 kDa heat shock protein A K04080 ibpA; molecular chaperone IbpA
D HNE_3416 S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D HNE_1961 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D HNE_0472 protease, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D HNE_1313 protease, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D HNE_0158 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HNE_1919 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HNE_0087 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D HNE_2496 putative fimbrial assembly protein K07346 fimC; fimbrial chaperone protein
D HNE_0006 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HNE_0819 putative lipoprotein K09796 pccA; periplasmic copper chaperone A
D HNE_3412 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D HNE_1791 peptidylprolyl cis-trans isomerase, homolog K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D HNE_1565 putative peptidylprolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D HNE_3175 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D HNE_2150 PPIC-type PPIASE domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D HNE_1882 trx; thioredoxin K03671 TXN; thioredoxin
D HNE_2426 putative thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D HNE_3547 putative thioredoxin K05838 ybbN; putative thioredoxin
D HNE_3169 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D HNE_1949 glutaredoxin homolog K07390 grxD; monothiol glutaredoxin
D HNE_3519 putative thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:hne04131]
D HNE_2269 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HNE_1628 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D HNE_3181 fda; fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HNE_3179 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HNE_0031 phosphoglycerate mutase 1 family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HNE_2098 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HNE_2422 putative membrane protein K06902 UMF1; MFS transporter, UMF1 family
D HNE_3021 putative membrane protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:hne03032]
D HNE_0945 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HNE_3264 conserved hypothetical protein K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D HNE_2469 hup2; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HNE_0712 hup1; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HNE_1163 putative integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D HNE_0191 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D HNE_0564 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HNE_2164 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HNE_2889 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HNE_2764 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HNE_1767 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HNE_0563 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HNE_2272 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HNE_3559 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HNE_1812 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HNE_0005 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HNE_0372 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HNE_2755 rnhB; ribonuclease HIII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HNE_1412 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HNE_0386 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HNE_2760 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HNE_0552 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HNE_0881 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HNE_0976 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HNE_2276 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:hne03036]
D HNE_0877 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HNE_3181 fda; fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HNE_2469 hup2; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HNE_0712 hup1; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HNE_1163 putative integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D HNE_0191 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D HNE_0564 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HNE_1800 hemimethylated DNA binding domain protein K11940 hspQ; heat shock protein HspQ
D HNE_2969 dps; dps protein K04047 dps; starvation-inducible DNA-binding protein
D HNE_2006 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HNE_1917 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D HNE_2047 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D HNE_2046 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D HNE_0391 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HNE_3390 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HNE_3030 putative penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HNE_3541 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HNE_3031 putative cell division protein FtsL K03586 ftsL; cell division protein FtsL
D HNE_0392 putative cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D HNE_3025 cell cycle protein, RodA/FtsW/SpoVE family K03588 ftsW; cell division protein FtsW
D HNE_3391 putative permease K09811 ftsX; cell division transport system permease protein
D HNE_0390 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HNE_3457 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D HNE_0331 ATPase, AFG1 family K06916 zapE; cell division protein ZapE
D HNE_0674 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HNE_0212 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HNE_2191 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HNE_2937 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HNE_2936 putative rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D HNE_2933 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D HNE_1128 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D HNE_3561 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D HNE_1300 CobQ/CobB/MinD/ParA nucleotide binding domain K03496 parA; chromosome partitioning protein
D HNE_0708 nucleotide binding protein K03496 parA; chromosome partitioning protein
D HNE_2530 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HNE_3560 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HNE_0881 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HNE_0976 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HNE_3563 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HNE_3562 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HNE_2768 gid; gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D HNE_3308 putative tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D HNE_0080 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D HNE_0468 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HNE_0415 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:hne03400]
D HNE_1798 deoxyribodipyrimidine photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D HNE_3082 deoxyribodipyrimidine photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D HNE_1914 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HNE_2040 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HNE_3173 putative mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HNE_2782 hydrolase, NUDIX family, NudH subfamily K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HNE_3267 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HNE_3385 ada; ADA regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D HNE_1422 deoxyribodipyrimidine photolyase homolog K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D HNE_1522 alkB; alkylated DNA repair protein AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D HNE_2611 conserved hypothetical protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D HNE_2792 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D HNE_1908 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D HNE_3393 putative DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D HNE_0860 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HNE_3274 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HNE_3549 putative exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HNE_1935 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HNE_1968 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HNE_0386 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HNE_1412 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HNE_2765 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HNE_3045 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HNE_2966 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HNE_2938 putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HNE_2858 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HNE_2857 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HNE_2827 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HNE_0872 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HNE_1985 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HNE_0297 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HNE_0913 putative DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D HNE_0920 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HNE_1840 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HNE_1767 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HNE_0563 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HNE_2272 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HNE_3559 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HNE_1812 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HNE_0005 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HNE_0372 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HNE_2764 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HNE_2742 recA; recA protein K03553 recA; recombination protein RecA
D HNE_0146 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HNE_0147 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HNE_0145 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HNE_2952 RusA family protein K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D HNE_1896 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HNE_0720 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HNE_0561 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HNE_1987 putative ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HNE_0879 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HNE_0370 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HNE_0385 putative DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HNE_1883 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D HNE_1884 conserved hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D HNE_3107 conserved hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D HNE_2760 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HNE_0552 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HNE_2276 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HNE_2469 hup2; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HNE_0712 hup1; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HNE_1163 putative integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D HNE_0191 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D HNE_0541 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HNE_2532 ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HNE_2286 putative DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HNE_1786 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HNE_2464 conserved hypothetical protein K14160 imuA; protein ImuA
D HNE_2465 conserved hypothetical protein K14161 imuB; protein ImuB
D HNE_2466 putative DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D HNE_0604 ATP-dependent helicase, DEAD/DEAH family K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D HNE_1555 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HNE_0869 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HNE_2255 ribonucleoside reductase homolog K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HNE_0373 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:hne03029]
D HNE_0351 putative ubiquinol-cytochrome c reductase, cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D HNE_0114 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HNE_0428 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HNE_1769 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HNE_1734 tuf1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HNE_2853 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HNE_2854 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HNE_1160 conserved hypothetical protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D HNE_3415 putative helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D HNE_0878 era; GTP-binding protein Era K03595 era; GTPase
D HNE_2625 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HNE_3557 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HNE_2257 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HNE_2715 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HNE_2293 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HNE_2291 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HNE_2299 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HNE_3264 conserved hypothetical protein K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D HNE_2764 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HNE_1776 outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D HNE_3321 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HNE_3318 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HNE_1962 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HNE_1961 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D HNE_0761 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HNE_2620 class-V pyridoxal-phosphate-dependent aminotransferase, NifS/IscS family K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HNE_1949 glutaredoxin homolog K07390 grxD; monothiol glutaredoxin
D HNE_0468 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HNE_0443 conserved domain protein K18180 COA7; cytochrome c oxidase assembly factor 7
D HNE_1040 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D HNE_1042 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D HNE_2318 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D HNE_0414 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HNE_1044 conserved domain protein K14998 SURF1; surfeit locus 1 family protein
D HNE_3397 SCO1/SenC family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hne02000]
D HNE_1366 efflux ABC transporter, permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D HNE_1242 efflux ABC transporter, heavy metal transporter (HMT) family (ABCB), permease/ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D HNE_3241 putative multidrug ABC transporter, permease/ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D HNE_3089 ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HNE_3192 efflux ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HNE_1661 putative amino acid ABC transporter, ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HNE_1660 amino acid ABC transporter, permease/ATP-binding protein CydD, putaive K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HNE_1647 putative macrolide efflux ABC transporter, permease/ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D HNE_0754 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D HNE_2693 ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HNE_2694 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D HNE_2695 iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HNE_2919 virulence factor Mce homolog K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HNE_2253 mammalian cell entry protein homolog K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HNE_2921 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HNE_0724 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HNE_2920 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HNE_0723 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HNE_2918 putative lipoprotein K18480 linN; cholesterol transport system auxiliary component
D HNE_2106 toluene tolerance protein, Ttg2 family K07323 mlaC; phospholipid transport system substrate-binding protein
D HNE_2138 toluene tolerance protein, Ttg2 family K07323 mlaC; phospholipid transport system substrate-binding protein
D HNE_2990 putative phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HNE_2032 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D HNE_2031 pstA; phosphate ABC transporter, permease protein PtsA K02038 pstA; phosphate transport system permease protein
D HNE_2030 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HNE_2459 phnD; phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D HNE_2461 phnE; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D HNE_2460 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D HNE_2874 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HNE_2879 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HNE_2880 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HNE_0172 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HNE_1143 iron compound ABC transporter, periplasmic substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HNE_1515 putative iron ABC transporter, periplasmic iron-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HNE_1144 iron compound ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D HNE_1516 iron compound ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D HNE_1145 iron compound ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HNE_1517 iron compound ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HNE_0795 lipopolysaccharide ABC transporter, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D HNE_0796 lipopolysaccharide ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D HNE_2274 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D HNE_1586 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D HNE_2275 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D HNE_1587 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D HNE_0205 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HNE_3510 putative ABC transporter, permease protein K25151 gldF; gliding motility-associated transport system permease protein
D HNE_3509 ABC transporter, ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D HNE_3511 conserved hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D HNE_1536 ABC transporter, permease protein K25180 ybhR; drug efflux transport system permease protein
D HNE_1535 ABC transporter, permease protein K25181 ybhS; drug efflux transport system permease protein
D HNE_1534 ABC transporter, ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D HNE_1533 HlyD family secretion protein K25183 ybhG; membrane fusion protein YbhG
D HNE_1765 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D HNE_1766 lipoprotein releasing system, ATP-binding protein, homolog K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HNE_3517 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D HNE_3516 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D HNE_3515 ccmA; heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D HNE_3391 putative permease K09811 ftsX; cell division transport system permease protein
D HNE_3390 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HNE_3164 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HNE_3056 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HNE_3165 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HNE_1881 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HNE_0187 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HNE_0186 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HNE_2616 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D HNE_0962 sodium:sulfate symporter family protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D HNE_0711 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D HNE_2771 putative DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D HNE_2304 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HNE_3037 putative membrane protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D HNE_1559 narK; nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D HNE_0295 putative muropeptide permease AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HNE_0337 transporter, peptide-acetyl-coenzyme A transporter (PAT) family K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HNE_0492 tetA; tetracycline-efflux transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D HNE_3113 drug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D HNE_1370 major facilitator family transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D HNE_2405 drug resistance transporter, EmrB/QacA family K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D HNE_2422 putative membrane protein K06902 UMF1; MFS transporter, UMF1 family
D HNE_3021 putative membrane protein K06902 UMF1; MFS transporter, UMF1 family
D HNE_0619 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D HNE_0439 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D HNE_0438 PTS system IIA component, mannose/fructose/sorbose (Man) family K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HNE_3289 sugar transporter, PTS fructose-mannitol (Fru) family K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D HNE_0461 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D HNE_0436 transporter, cation channel family K10716 kch; voltage-gated potassium channel
D HNE_3152 cation channel family protein K08714 VGSC; voltage-gated sodium channel
D HNE_3542 ammonium transporter family protein K03320 amt; ammonium transporter, Amt family
D HNE_2391 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_2762 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_2960 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_3104 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_3110 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_3237 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_0050 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_0324 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_1014 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_1223 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_0132 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HNE_2140 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D HNE_2236 fnt; formate/nitrite transporter K21993 fdhC; formate transporter
D HNE_0190 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D HNE_0597 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D HNE_0598 transporter, small conductance mechanosensitive ion channel (MscS) family K03442 mscS; small conductance mechanosensitive channel
D HNE_1377 transporter, small conductance mechanosensitive ion channel (MscS) family K16052 ynaI; MscS family membrane protein
D HNE_1270 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D HNE_0253 putative chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D HNE_3347 chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D HNE_0251 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D HNE_0894 putative chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D HNE_2634 putative TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D HNE_2635 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D HNE_2632 putative TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D HNE_2633 putative TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D HNE_0151 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D HNE_0152 transport energizing protein, ExbD/TolR family K03560 tolR; biopolymer transport protein TolR
D HNE_2787 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D HNE_1001 crcB; crcB protein K06199 crcB; fluoride exporter
D HNE_1689 merT; mercuric transport protein MerT K08363 merT; mercuric ion transport protein
D HNE_1690 merP; mercuric transport protein, periplasmic component K08364 merP; periplasmic mercuric ion binding protein
D HNE_0072 putative transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HNE_0083 CBS/transporter domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HNE_1020 putative outer membrane protein K16079 omp31; outer membrane immunogenic protein
D HNE_0822 conserved hypothetical protein K16079 omp31; outer membrane immunogenic protein
D HNE_1943 OmpA family protein K16079 omp31; outer membrane immunogenic protein
D HNE_1432 membrane protein, OmpA family K03286 TC.OOP; OmpA-OmpF porin, OOP family
D HNE_0935 ompA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D HNE_2869 conserved hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D HNE_1821 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D HNE_1998 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D HNE_0088 fimbrial usher protein K07347 fimD; outer membrane usher protein
D HNE_2495 fimbrial usher protein K07347 fimD; outer membrane usher protein
D HNE_0394 conserved hypothetical protein K19611 fepA; ferric enterobactin receptor
D HNE_2116 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor
D HNE_1142 putative TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D HNE_1514 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D HNE_1653 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D HNE_1973 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2174 TonB-dependent receptor family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_0220 transporter, outer membrane receptor (OMR) family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2423 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2180 transporter, outer membrane receptor (OMR) family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_1470 putative TonB dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2329 transporter, outer membrane receptor (OMR) family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_1051 TonB dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2505 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_1258 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_1261 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_1466 putative TonB dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_1084 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_1117 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_1337 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_0836 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_0164 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_0165 tonB dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_1611 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_1617 transporter, outer membrane receptor (OMR) family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2816 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_3050 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_3538 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_3381 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2389 transporter, outer membrane receptor (OMR) family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2408 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2121 transporter, outer membrane receptor (OMR) family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2128 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2210 transporter, outer membrane receptor (OMR) family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2448 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2456 transporter, outer membrane receptor (OMR) family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2355 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_2662 transporter, outer membrane receptor (OMR) family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D HNE_1716 efflux transporter, outer membrane factor (OMF) family K15725 czcC; outer membrane protein, heavy metal efflux system
D HNE_1678 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D HNE_0213 RND efflux system, outer membrane lipoprotein, NodT family K18300 oprN; outer membrane protein, multidrug efflux system
D HNE_2187 putative outer membrane efflux protein K18300 oprN; outer membrane protein, multidrug efflux system
D HNE_1648 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D HNE_3059 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D HNE_2650 polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D HNE_1776 outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D HNE_0773 PQQ enzyme repeat domain protein K17713 bamB; outer membrane protein assembly factor BamB
D HNE_0387 putative competence lipoprotein ComL K05807 bamD; outer membrane protein assembly factor BamD
D HNE_1857 outer membrane protein, OMP85 family K07278 tamA; translocation and assembly module TamA
D HNE_1858 conserved domain protein K09800 tamB; translocation and assembly module TamB
D HNE_2142 Hep/Hag repeat protein K21449 ata; trimeric autotransporter adhesin
D HNE_0204 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D HNE_0203 conserved hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D HNE_2149 conserved hypothetical protein K04744 lptD; LPS-assembly protein
D HNE_3558 putative lipoprotein K03643 lptE; LPS-assembly lipoprotein
D HNE_0106 CBS/transporter domain protein K06189 corC; hemolysin (HlyC) family protein
D HNE_0549 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D HNE_0184 metal cation transporter, zinc (Zn2+)-iron (Fe2+) permease (ZIP) family K16267 zipB; zinc and cadmium transporter
D HNE_1714 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D HNE_2373 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D HNE_1693 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D HNE_1851 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18303 mexK; multidrug efflux pump
D HNE_0211 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D HNE_0815 AcrB/AcrD/AcrF family protein K18989 vexF; multidrug efflux pump
D HNE_0908 multidrug resistance protein, SMR family K03297 emrE; small multidrug resistance pump
D HNE_2609 quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D HNE_0481 putative membrane protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D HNE_3537 rarD; transporter, chloramphenicol-sensitivity protein (RarD) family K05786 rarD; chloramphenicol-sensitive protein RarD
D HNE_1490 choline/carnitine/betaine transporter K02168 betT; choline/glycine/proline betaine transport protein
D HNE_3087 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D HNE_0473 sodium/calcium exchanger K07301 yrbG; cation:H+ antiporter
D HNE_1856 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D HNE_1081 probable cation/acetate symporter ActP K11928 putP; sodium/proline symporter
D HNE_1645 transporter, solute:sodium symporter (SSS) family K11928 putP; sodium/proline symporter
D HNE_1401 transporter, solute:sodium symporter (SSS) family K14393 actP; cation/acetate symporter
D HNE_1971 Na+/H+ antiporter family protein K18218 tet35; tetracycline resistance efflux pump
D HNE_2462 putative transporter K24160 NHA1; sodium/hydrogen antiporter
D HNE_0214 transporter, monovalent cation:proton antiporter-2 (CPA2) family K11105 cvrA; potassium/hydrogen antiporter
D HNE_0044 kefC; glutathione-regulated potassium-efflux system protein KefC K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D HNE_2775 glutathione-regulated potassium-efflux system protein K03455 KEA1_2_3; K+:H+ antiporter
D HNE_2733 putative potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D HNE_1323 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D HNE_2007 putative potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D HNE_2008 trkA; potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D HNE_0575 putative chromate ion transporter K07240 chrA; chromate transporter
D HNE_0610 inorganic anion transporter, sulfate permease (SulP) family K03321 TC.SULP; sulfate permease, SulP family
D HNE_0998 inorganic anion transporter, sulfate permease (SulP) family K03321 TC.SULP; sulfate permease, SulP family
D HNE_2126 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D HNE_1902 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D HNE_0992 putative arsenical-resistance protein K03325 ACR3; arsenite transporter
D HNE_0732 putative membrane protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D HNE_0733 monovalent cation/proton antiporter, MnhB/PhaB family K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D HNE_0734 putative NADH-quinone oxidoreductase K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D HNE_0738 putative NADH-quinone oxidoreductase K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D HNE_0735 putative NADH-quinone oxidoreductase K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D HNE_0736 putative NADH-quinone oxidoreductase K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D HNE_0729 monovalent cation/proton antiporter, MnhE/PhaE family K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D HNE_0730 monovalent cation/proton antiporter, MnhF/PhaF family K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D HNE_0731 monovalent cation/proton antiporter, MnhG/PhaG family K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D HNE_0519 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D HNE_2301 auxin efflux carrier family protein K13936 mdcF; malonate transporter and related proteins
D HNE_0885 putative membrane protein K22736 VIT; vacuolar iron transporter family protein
D HNE_0501 membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein
D HNE_3025 cell cycle protein, RodA/FtsW/SpoVE family K03588 ftsW; cell division protein FtsW
D HNE_1628 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D HNE_2631 TonB family protein K03832 tonB; periplasmic protein TonB
D HNE_0155 ompA family protein K03640 pal; peptidoglycan-associated lipoprotein
D HNE_3490 hypothetical protein K03646 tolA; colicin import membrane protein
D HNE_0154 tolB; tolB protein K03641 tolB; TolB protein
D HNE_1158 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D HNE_1560 narG; nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D HNE_1561 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D HNE_1564 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D HNE_2404 transporter, membrane fusion protein (MFP) family K03543 emrA; membrane fusion protein, multidrug efflux system
D HNE_2372 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D HNE_1715 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D HNE_1694 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D HNE_2112 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D HNE_0212 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HNE_2191 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HNE_0816 efflux transporter, RND family, MFP subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D HNE_1646 efflux transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D HNE_1194 chain length determinant family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D HNE_1176 pnuC; nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D HNE_1310 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D HNE_1704 copD; copper resistance protein D K07245 pcoD; copper resistance protein D
D HNE_1705 copC; copper resistance protein CopC K07156 copC; copper resistance protein C
D HNE_2400 putative MltA-interacting protein MipA K07274 mipA; MipA family protein
D HNE_2224 MipA family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:hne02044]
D HNE_1678 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D HNE_1864 gspC; general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D HNE_1865 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D HNE_2514 type II secretion system protein K02453 gspD; general secretion pathway protein D
D HNE_1866 gspE; general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HNE_2517 type II secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HNE_1867 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D HNE_2518 bacterial type II secretion system protein F K02455 gspF; general secretion pathway protein F
D HNE_1868 gspG1; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D HNE_2516 gspG2; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D HNE_1869 gspH; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D HNE_1870 gspI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D HNE_1871 gspJ; general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D HNE_1872 gspK; general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D HNE_1873 gspL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D HNE_1874 gspM; general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D HNE_1875 gspN; general secretion pathway protein N K02463 gspN; general secretion pathway protein N
D HNE_2653 gspO; prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HNE_3016 pilus assembly protein CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D HNE_1149 putative Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D HNE_3015 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D HNE_1150 type II/III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D HNE_3014 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D HNE_3013 pilus assembly protein CpaD K02281 cpaD; pilus assembly protein CpaD
D HNE_1152 putative pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D HNE_3012 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D HNE_1153 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HNE_3011 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HNE_3010 secretion system protein K12510 tadB; tight adherence protein B
D HNE_1154 putative Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D HNE_3009 type II secretion system protein K12511 tadC; tight adherence protein C
D HNE_1155 putative Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D HNE_0760 conserved hypothetical protein K27080 tadG; tight adherence protein G
D HNE_3017 flp/fap pilus protein K02651 flp; pilus assembly protein Flp/PilA
D HNE_3172 flp/fap pilus protein K02651 flp; pilus assembly protein Flp/PilA
D HNE_3255 conserved hypothetical protein K02221 yggT; YggT family protein
D HNE_0273 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HNE_0275 FlhB/HrpN/YscU/SpaS family protein K02401 flhB; flagellar biosynthesis protein FlhB
D HNE_0242 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HNE_0268 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HNE_1394 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HNE_0244 putative flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HNE_0245 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HNE_0272 fliQ; flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HNE_0274 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HNE_1445 TraG/TraD family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D HNE_1622 TraG/TraD family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D HNE_1721 type IV secretion system protein TrbG family protein K20532 trbG; type IV secretion system protein TrbG
D HNE_1720 type IV secretion system protein TrbI family protein K20533 trbI; type IV secretion system protein TrbI
D HNE_0087 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D HNE_2496 putative fimbrial assembly protein K07346 fimC; fimbrial chaperone protein
D HNE_0088 fimbrial usher protein K07347 fimD; outer membrane usher protein
D HNE_2495 fimbrial usher protein K07347 fimD; outer membrane usher protein
D HNE_0086 spore coat family protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HNE_0089 putative lipoprotein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HNE_3176 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HNE_0006 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HNE_1926 secD1; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HNE_2378 secD2; protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D HNE_2001 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HNE_1925 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HNE_1793 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HNE_2831 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HNE_0036 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HNE_3526 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HNE_1927 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HNE_0414 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HNE_1934 tatA2; twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D HNE_1933 tatA1; twin-arginine translocation protein TatA K03117 tatB; sec-independent protein translocase protein TatB
D HNE_1932 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:hne02042]
D HNE_0072 putative transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HNE_0083 CBS/transporter domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:hne02022]
D HNE_3058 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HNE_2028 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D HNE_3094 sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D HNE_3093 ompR; DNA-binding response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D HNE_2189 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D HNE_2188 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D HNE_1404 chvG; sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D HNE_1408 chvI; DNA-binding response regulator ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D HNE_1306 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D HNE_1312 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D HNE_2361 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D HNE_2012 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D HNE_2011 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D HNE_2010 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D HNE_2009 ntrX; sigma-54 dependent DNA-binding response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D HNE_0639 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HNE_2910 pleC; non-motile and phage-resistance protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D HNE_0746 putative sensor histidine kinase DivJ K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D HNE_2284 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D HNE_2285 cell division response regulator DivK K11443 divK; two-component system, cell cycle response regulator DivK
D HNE_1984 conserved hypothetical protein K13591 popA; two-component system, cell cycle response regulator PopA
D HNE_0507 putative sensor histidine kinase/response regulator CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D HNE_0944 ctrA; DNA-binding response regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
D HNE_0229 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D HNE_1234 fixL; sensory box sensor histidine kinase FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D HNE_1235 fixJ; DNA-binding response regulator FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D HNE_3398 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D HNE_3399 regA; DNA-binding response regulator RegA K15012 regA; two-component system, response regulator RegA
D HNE_2233 nasT; response regulator NasT K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D HNE_1618 ANTAR domain protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:hne02035]
D HNE_0640 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HNE_0639 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HNE_0268 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HNE_0245 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D HNE_0272 fliQ; flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D HNE_0274 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D HNE_0273 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D HNE_0275 FlhB/HrpN/YscU/SpaS family protein K02401 flhB; flagellar biosynthesis protein FlhB
D HNE_1392 putative flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D HNE_0246 putative flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D HNE_1394 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HNE_0244 putative flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D HNE_0242 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D HNE_0247 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D HNE_0257 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D HNE_0258 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D HNE_0241 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D HNE_0259 hypothetical protein K02415 fliL; flagellar protein FliL
D HNE_0271 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D HNE_0261 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D HNE_0269 putative flagellar protein K02387 flgB; flagellar basal-body rod protein FlgB
D HNE_0270 flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D HNE_0260 putative basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D HNE_0255 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D HNE_0256 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D HNE_0262 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D HNE_0250 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D HNE_0249 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D HNE_0248 putative flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D HNE_0264 flagellin Laf1 K02406 fliC; flagellin
D HNE_0253 putative chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D HNE_3347 chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D HNE_0251 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D HNE_0894 putative chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D HNE_0265 putative flagellar biosynthesis regulatory protein K06602 flaF; flagellar biosynthesis activator protein FlaF
D HNE_0499 flbT; flagellum biosynthesis repressor protein FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT
D HNE_0266 putative flagellum biosynthesis repressor protein FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT
D HNE_0942 flagellar biosynthesis protein FlhF homolog K02404 flhF; flagellar biosynthesis protein FlhF
D HNE_0943 motR; motR protein K04562 flhG; flagellar biosynthesis protein FlhG
D HNE_2653 gspO; prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HNE_3017 flp/fap pilus protein K02651 flp; pilus assembly protein Flp/PilA
D HNE_3172 flp/fap pilus protein K02651 flp; pilus assembly protein Flp/PilA
D HNE_3016 pilus assembly protein CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D HNE_1149 putative Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D HNE_3015 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D HNE_1150 type II/III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D HNE_3014 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC
D HNE_3013 pilus assembly protein CpaD K02281 cpaD; pilus assembly protein CpaD
D HNE_1152 putative pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D HNE_3012 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D HNE_1153 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HNE_3011 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HNE_0087 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D HNE_2496 putative fimbrial assembly protein K07346 fimC; fimbrial chaperone protein
D HNE_0088 fimbrial usher protein K07347 fimD; outer membrane usher protein
D HNE_2495 fimbrial usher protein K07347 fimD; outer membrane usher protein
D HNE_0086 spore coat family protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D HNE_0089 putative lipoprotein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:hne04812]
D HNE_2937 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HNE_0390 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HNE_0391 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HNE_1128 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D HNE_3561 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D HNE_1300 CobQ/CobB/MinD/ParA nucleotide binding domain K03496 parA; chromosome partitioning protein
D HNE_0708 nucleotide binding protein K03496 parA; chromosome partitioning protein
D HNE_2530 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HNE_3560 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:hne04147]
D HNE_3181 fda; fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D HNE_1980 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HNE_3179 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HNE_3180 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HNE_2098 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HNE_1970 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D HNE_1962 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HNE_3321 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HNE_1733 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HNE_1217 dipeptidyl aminopeptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D HNE_0464 putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D HNE_1804 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HNE_1734 tuf1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HNE_2853 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HNE_2290 histidine triad family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HNE_2706 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3065 acetyl-CoA acetyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_3133 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0758 acetyl-CoA acyltransferase/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0959 bktB; beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0984 conserved hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HNE_1947 angiotensin-converting enzyme family protein K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D HNE_0788 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HNE_2830 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HNE_3465 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HNE_3491 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HNE_1212 Cys/Met metabolism PLP-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D HNE_0613 decarboxylase, group II K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D HNE_0383 putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D HNE_1335 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HNE_2084 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HNE_0898 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HNE_2900 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D HNE_3096 putative pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D HNE_3483 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HNE_3126 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HNE_3372 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HNE_1974 lpdA1; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3262 lpdA2; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HNE_3470 etfA; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D HNE_1738 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HNE_1792 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HNE_0031 phosphoglycerate mutase 1 family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HNE_2399 lipocalin-like lipoprotein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:hne02048]
D HNE_2539 type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HNE_2541 type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HNE_2542 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HNE_1901 ccrM; modification methylase CcrM K13581 ccrM; modification methylase [EC:2.1.1.72]
D HNE_2533 conserved domain protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D HNE_3296 pspC; phage shock protein C K03973 pspC; phage shock protein C
D HNE_3295 pspB; phage shock protein B K03970 pspB; phage shock protein B
D HNE_0348 putative addiction module toxin K07341 doc; death on curing protein
D HNE_2665 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D HNE_2664 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D HNE_0390 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HNE_2937 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HNE_0881 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HNE_0976 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HNE_1783 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HNE_2579 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HNE_1986 TPR repeat protein K09159 cptB; antitoxin CptB
D HNE_2620 class-V pyridoxal-phosphate-dependent aminotransferase, NifS/IscS family K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:hne04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:hne04090]
D HNE_1217 dipeptidyl aminopeptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D HNE_1947 angiotensin-converting enzyme family protein K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:hne01504]
D HNE_0492 tetA; tetracycline-efflux transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D HNE_1971 Na+/H+ antiporter family protein K18218 tet35; tetracycline resistance efflux pump
D HNE_2906 peptidase, M56 family K02172 blaR1; bla regulator protein blaR1
D HNE_2905 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D HNE_2189 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D HNE_2188 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D HNE_0212 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HNE_2191 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D HNE_0211 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D HNE_1648 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D HNE_3059 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D HNE_0213 RND efflux system, outer membrane lipoprotein, NodT family K18300 oprN; outer membrane protein, multidrug efflux system
D HNE_2187 putative outer membrane efflux protein K18300 oprN; outer membrane protein, multidrug efflux system
D HNE_1851 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18303 mexK; multidrug efflux pump
D HNE_1678 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D HNE_2112 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:hne00537]
D HNE_3483 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HNE_1970 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:hne03100]
D HNE_2657 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HNE_0197 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HNE_3145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HNE_2575 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HNE_0224 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HNE_3447 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HNE_1682 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HNE_1425 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HNE_1680 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HNE_2637 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HNE_1967 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HNE_2599 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HNE_2683 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HNE_1000 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HNE_1999 tRNA-His K14226 tRNA-His; tRNA His
D HNE_2658 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HNE_2078 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HNE_0963 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HNE_3222 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HNE_1063 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HNE_1595 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HNE_1132 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HNE_0545 tRNA-Met K14230 tRNA-Met; tRNA Met
D HNE_2654 tRNA-Met K14230 tRNA-Met; tRNA Met
D HNE_1022 tRNA-Met K14230 tRNA-Met; tRNA Met
D HNE_1730 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HNE_3046 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HNE_1165 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HNE_2573 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HNE_2738 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HNE_1816 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HNE_2557 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HNE_2238 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HNE_3478 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HNE_1341 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HNE_3231 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HNE_1829 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HNE_1736 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HNE_2685 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HNE_0978 tRNA-Val K14237 tRNA-Val; tRNA Val
D HNE_0703 tRNA-Val K14237 tRNA-Val; tRNA Val
D HNE_0232 tRNA-Val K14237 tRNA-Val; tRNA Val
D HNE_2487 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D HNE_2659 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HNE_2656 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HNE_2655 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HNE_2964 sRNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HNE_0529 dehydrogenase, glucose/sorbosone family K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D HNE_2788 dehydrogenase, glucose/sorbosone family K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D HNE_0129 adhA; alcohol dehydrogenase (acceptor) K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1]
D HNE_2803 calB; coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D HNE_3070 pyruvate ferredoxin/flavodoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D HNE_2483 putative isoquinoline 1-oxidoreductase, alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D HNE_2482 putative isoquinoline 1-oxidoreductase, beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D HNE_2202 putative isoquinoline 1-oxidoreductase, beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D HNE_0588 lys1; saccharopine dehydrogenase (NAD+, L-lysine forming) K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D HNE_1909 putative electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D HNE_2746 putative quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D HNE_3323 putative quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D HNE_2975 oxidoreductase, zinc-binding dehydrogenase family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D HNE_2433 putative quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D HNE_0510 oxidoreductase, 2-nitropropane dioxygenase family K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D HNE_1621 oxidoreductase, 2-nitropropane dioxygenase family K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D HNE_0965 acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D HNE_3479 msrA2; methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D HNE_3001 msrA1; methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D HNE_3496 msrA3; methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D HNE_0120 msrB1; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D HNE_1166 msrB2; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D HNE_0315 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D HNE_3365 chloride peroxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D HNE_2627 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HNE_2388 ohr; organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D HNE_3034 alkylhydroperoxidase, AhpD family K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D HNE_3035 ahpC; alkylhydroperoxide reductase C K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D HNE_0536 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D HNE_1491 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D HNE_2117 oxidoreductase, 2OG-Fe(II) oxygenase family K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D HNE_1625 oxidoreductase, 2OG-Fe(II) oxygenase family K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D HNE_3277 putative hydrolase NrgC K22027 iacA; indole-3-acetate monooxygenase [EC:1.14.13.235]
D HNE_1691 merA; mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D HNE_3151 ferredoxin-NADP reductase family protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D HNE_3533 putative arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D HNE_0991 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D HNE_1679 putative protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D HNE_1928 pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D HNE_1795 putative cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D HNE_1174 acetyltransferase, GNAT family K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D HNE_1674 acetyltransferase, GNAT family K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D HNE_0857 conserved hypothetical protein K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D HNE_0107 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D HNE_0514 acetyltransferase, GNAT family K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D HNE_0416 acetyltransferase, GNAT family K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D HNE_3535 acetyltransferase, GNAT family K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D HNE_2251 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D HNE_0893 ate; arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D HNE_1384 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HNE_1652 ApbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HNE_0001 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D HNE_1316 glnE; glutamate ammonia ligase adenylyl-transferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D HNE_0163 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D HNE_0624 acetyl xylan esterase domain protein K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D HNE_1211 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D HNE_0150 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D HNE_0654 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D HNE_1296 conserved hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D HNE_3084 phosphoglycerate mutase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D HNE_1671 metallo-beta-lactamase family protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D HNE_1811 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HNE_3468 putative nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D HNE_3449 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D HNE_1271 putative lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D HNE_2603 putative licheninase K16559 exoK; endo-1,3-1,4-beta-glycanase ExoK [EC:3.2.1.-]
D HNE_2652 putative licheninase K16559 exoK; endo-1,3-1,4-beta-glycanase ExoK [EC:3.2.1.-]
D HNE_1025 putative D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D HNE_0480 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HNE_0512 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HNE_0221 penicillin amidase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D HNE_0584 hydrolase, carbon-nitrogen family K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D HNE_0465 putative Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D HNE_0342 ATPase, AAA family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D HNE_1205 ATPase, AAA family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D HNE_2080 carbohydrate kinase family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D HNE_2132 conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D HNE_0864 fcs2; feruloyl-CoA synthetase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D HNE_0167 fcs1; feruloyl-CoA synthetase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D HNE_1963 AMP-binding enzyme K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42]
D HNE_2444 fcs4; feruloyl-CoA synthetase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-]
D HNE_1835 fcs3; feruloyl-CoA synthetase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-]
D HNE_1226 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D HNE_1713 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D HNE_1889 fdxB; ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
D HNE_3418 fdxA; ferredoxin K05524 fdxA; ferredoxin
D HNE_2402 cytochrome c family protein K12263 cccB; cytochrome c551
D HNE_1308 tetratricopeptide repeat protein K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG
D HNE_3471 eftB; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D HNE_3458 putative membrane protein K06203 cysZ; CysZ protein
D HNE_3552 alanine racemase, N-terminal domain protein K06997 yggS; PLP dependent protein
D HNE_0035 conserved hypothetical protein K22479 argA; N-acetyltransferase
D HNE_2946 conserved hypothetical protein K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D HNE_1196 putative O-antigen polymerase K16567 exoQ; exopolysaccharide production protein ExoQ
D HNE_0799 putative membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D HNE_3230 HemY domain protein K02498 hemY; HemY protein
D HNE_3271 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D HNE_2107 p-aminobenzoyl-glutamate transporter (AbgT) family, permease protein K12942 abgT; aminobenzoyl-glutamate transport protein
D HNE_2082 hypothetical protein K18586 COQ4; ubiquinone biosynthesis protein COQ4
D HNE_3161 rpsU-divergently transcribed protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D HNE_2020 cyclase/dehydrase family protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D HNE_2438 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D HNE_2195 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HNE_1966 cold shock DNA-binding protein K03704 cspA; cold shock protein
D HNE_0110 cold shock DNA-binding protein K03704 cspA; cold shock protein
D HNE_0960 cold shock protein K03704 cspA; cold shock protein
D HNE_2386 S1 RNA binding domain protein K06959 tex; protein Tex
C 99974 Translation
D HNE_1669 conserved hypothetical protein K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D HNE_1029 clpS; ATP-dependent Clp protease, adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D HNE_2069 tig; trigger factor K03545 tig; trigger factor
D HNE_2799 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D HNE_2678 peptidase, T1A (proteasome) family K07395 K07395; putative proteasome-type protease
D HNE_1070 putative xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D HNE_0511 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC
D HNE_0764 conserved hypothetical protein TIGR00252 K07460 yraN; putative endonuclease
D HNE_2148 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D HNE_2642 ATPase, AAA family K07478 ycaJ; putative ATPase
D HNE_0539 ISHne1, transposase orfA K07483 K07483; transposase
D HNE_2576 ISHne3, transposase K07486 K07486; transposase
D HNE_3446 ISHne3, transposase K07486 K07486; transposase
D HNE_3248 ISHne3, transposase K07486 K07486; transposase
D HNE_2322 ISHne5, transposase K07486 K07486; transposase
D HNE_3101 ISHne5, transposase K07486 K07486; transposase
D HNE_1056 ISHne3, transposase K07486 K07486; transposase
D HNE_1948 ISHne4, transposase K07486 K07486; transposase
D HNE_2108 ISHne4, transposase K07486 K07486; transposase
D HNE_0538 ISHne1, transposase orfB K07497 K07497; putative transposase
D HNE_2511 ISHne6, transposase K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D HNE_3294 pspA; phage shock protein A K03969 pspA; phage shock protein A
D HNE_0371 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HNE_2445 sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HNE_0615 transporter, major facilitator family K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HNE_1474 major facilitator family transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HNE_2129 putative membrane protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HNE_2645 putative major facilitator family transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HNE_1338 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HNE_2674 amino acid transporter, cationic amino acid transporter (CAT) family K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HNE_2593 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HNE_1376 proton/peptide symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D HNE_3040 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D HNE_2177 transporter, solute:sodium symporter (SSS) family K03307 TC.SSS; solute:Na+ symporter, SSS family
D HNE_2932 sodium-dependent symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HNE_0101 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HNE_2334 sodium/alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HNE_2817 nucleoside transporter, NupC family K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D HNE_3522 putative intracellular septation protein A K06190 ispZ; intracellular septation protein
D HNE_1539 hemerythrin HHE cation binding domain protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D HNE_2556 site-specific recombinase, resolvase family K06400 spoIVCA; site-specific DNA recombinase
D HNE_3210 peptidase, M23 family K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D HNE_0364 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D HNE_3327 putative anti-sigma factor, ChR family K07167 chrR; putative transcriptional regulator
D HNE_0964 HPP family/CBS domain protein K07168 K07168; CBS domain-containing membrane protein
D HNE_2669 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D HNE_0104 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D HNE_2105 putative lipoprotein VacJ K04754 mlaA; phospholipid-binding lipoprotein MlaA
D HNE_3369 putative lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D HNE_0445 glycosyl hydrolase, family 25 K07273 acm; lysozyme
D HNE_0173 putative outer membrane protein OmpW K07275 ompW; outer membrane protein
D HNE_2677 conserved hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D HNE_1424 AsmA family protein K07289 asmA; AsmA protein
D HNE_2939 AsmA family protein K07290 yhjG; AsmA family protein
D HNE_1054 nodulation efficiency protein D family protein K07340 ybbJ; inner membrane protein
D HNE_3106 putative membrane protein K11744 tqsA; AI-2 transport protein TqsA
D HNE_1309 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D HNE_1314 putative cytochrome c-type biogenesis protein CycL K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D HNE_2029 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D HNE_3075 BFD-like [2Fe-2S] binding domain protein K02192 bfd; bacterioferritin-associated ferredoxin
D HNE_2377 mdoG; periplasmic glucans biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D HNE_0574 membrane protein, TerC family K05794 terC; tellurite resistance protein TerC
D HNE_3475 cutA; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D HNE_2671 apaG; ApaG protein K06195 apaG; ApaG protein
D HNE_1706 copper resistance protein B K07233 pcoB; copper resistance protein B
D HNE_1484 copB; copper resistance protein B K07233 pcoB; copper resistance protein B
D HNE_1556 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HNE_0719 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D HNE_0833 csaA; export-related chaperone CsaA K06878 K06878; tRNA-binding protein
D HNE_1540 protozoan/cyanobacterial globin family protein K06886 glbN; hemoglobin
D HNE_1173 protozoan/cyanobacterial globin family protein K06886 glbN; hemoglobin
D HNE_2581 protozoan/cyanobacterial globin family protein K06886 glbN; hemoglobin
D HNE_0544 phospholipase, patatin family K07001 K07001; NTE family protein
D HNE_2780 phospholipase, patatin family K07001 K07001; NTE family protein
D HNE_1276 cyclic nucleotide-binding/patatin-like phospholipase domain protein K07001 K07001; NTE family protein
D HNE_0420 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D HNE_2619 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D HNE_2615 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D HNE_0479 putative membrane protein K07058 K07058; membrane protein
D HNE_0744 Fe-S metabolism protein, SufE family K02426 sufE; cysteine desulfuration protein SufE
D HNE_2710 rhodanese domain protein K07146 K07146; UPF0176 protein
D HNE_1018 glyoxalase family protein K04750 phnB; PhnB protein
D HNE_0990 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D HNE_0886 LemA family protein K03744 lemA; LemA protein
D HNE_0126 putative membrane protein K08989 K08989; putative membrane protein
D HNE_2716 conserved domain protein K08990 ycjF; putative membrane protein
D HNE_1289 putative lipoprotein K09914 K09914; putative lipoprotein
D HNE_2270 conserved hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D HNE_0757 putative lipoprotein K06889 K06889; uncharacterized protein
D HNE_2403 putative lipoprotein K06889 K06889; uncharacterized protein
D HNE_3219 putative membrane protein K06890 K06890; uncharacterized protein
D HNE_2096 conserved hypothetical protein K06938 K06938; uncharacterized protein
D HNE_3340 conserved hypothetical protein K06940 K06940; uncharacterized protein
D HNE_0609 conserved domain protein K06953 K06953; uncharacterized protein
D HNE_1797 conserved hypothetical protein K06954 K06954; uncharacterized protein
D HNE_3301 conserved domain protein K06975 K06975; uncharacterized protein
D HNE_3299 conserved hypothetical protein K06975 K06975; uncharacterized protein
D HNE_2265 conserved hypothetical protein K06975 K06975; uncharacterized protein
D HNE_2621 conserved hypothetical protein K07018 K07018; uncharacterized protein
D HNE_1747 glyoxalase family protein K07032 K07032; uncharacterized protein
D HNE_2439 conserved hypothetical protein K07044 K07044; uncharacterized protein
D HNE_0057 amidohydrolase family protein K07045 K07045; uncharacterized protein
D HNE_2884 putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D HNE_3049 conserved hypothetical protein K07076 K07076; uncharacterized protein
D HNE_1527 putative membrane protein K07086 K07086; uncharacterized protein
D HNE_0484 putative membrane protein K07090 K07090; uncharacterized protein
D HNE_1064 putative membrane protein K07090 K07090; uncharacterized protein
D HNE_1546 putative membrane protein K07090 K07090; uncharacterized protein
D HNE_1616 putative membrane protein K07090 K07090; uncharacterized protein
D HNE_2773 conserved hypothetical protein K07090 K07090; uncharacterized protein
D HNE_2732 putative membrane protein K07090 K07090; uncharacterized protein
D HNE_2356 putative membrane protein K07090 K07090; uncharacterized protein
D HNE_1288 Tat (twin-arginine translocation) pathway signal sequence domain protein K07093 K07093; uncharacterized protein
D HNE_2452 conserved hypothetical protein K07093 K07093; uncharacterized protein
D HNE_2085 Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein
D HNE_2295 SET domain protein K07117 K07117; uncharacterized protein
D HNE_3380 oxidoreductase, short chain dehydrogenase/reductase family K07124 K07124; uncharacterized protein
D HNE_0693 conserved domain protein K07126 K07126; uncharacterized protein
D HNE_3423 conserved hypothetical protein K07126 K07126; uncharacterized protein
D HNE_1363 conserved hypothetical protein K07136 K07136; uncharacterized protein
D HNE_0627 MOSC domain protein K07140 K07140; MOSC domain-containing protein
D HNE_1830 putative membrane protein K07148 K07148; uncharacterized protein
D HNE_3546 ATP-dependent protease, La family K07157 K07157; uncharacterized protein
D HNE_1900 VWA domain protein K07161 K07161; uncharacterized protein
D HNE_3197 conserved hypothetical protein K08998 K08998; uncharacterized protein
D HNE_1965 conserved hypothetical protein K09005 K09005; uncharacterized protein
D HNE_2891 conserved hypothetical protein K09117 K09117; uncharacterized protein
D HNE_3254 conserved hypothetical protein K09131 K09131; uncharacterized protein
D HNE_3302 conserved hypothetical protein K09160 K09160; uncharacterized protein
D HNE_1796 conserved hypothetical protein K09701 K09701; uncharacterized protein
D HNE_2504 conserved hypothetical protein K09703 K09703; uncharacterized protein
D HNE_3405 conserved hypothetical protein K09705 K09705; uncharacterized protein
D HNE_0201 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D HNE_1453 YCII domain protein K09780 K09780; uncharacterized protein
D HNE_0133 conserved hypothetical protein K09780 K09780; uncharacterized protein
D HNE_1032 conserved hypothetical protein K09790 K09790; uncharacterized protein
D HNE_3545 conserved hypothetical protein K09791 K09791; uncharacterized protein
D HNE_3208 conserved hypothetical protein K09798 K09798; uncharacterized protein
D HNE_1023 outer membrane protein homolog K09807 K09807; uncharacterized protein
D HNE_1731 conserved hypothetical protein K09862 K09862; uncharacterized protein
D HNE_2289 conserved hypothetical protein K09919 K09919; uncharacterized protein
D HNE_1936 putative membrane protein K09922 K09922; uncharacterized protein
D HNE_1904 conserved hypothetical protein K09931 K09931; uncharacterized protein
D HNE_0471 hypothetical protein K09937 K09937; uncharacterized protein
D HNE_1649 putative membrane protein K09939 K09939; uncharacterized protein
D HNE_0188 putative lipoprotein K09950 K09950; uncharacterized protein
D HNE_1629 putative lipoprotein K09950 K09950; uncharacterized protein
D HNE_0225 GumN family protein K09973 K09973; uncharacterized protein
D HNE_2044 conserved hypothetical protein K09974 K09974; uncharacterized protein
D HNE_0636 conserved hypothetical protein K09978 K09978; uncharacterized protein
D HNE_3182 conserved hypothetical protein K09981 K09981; uncharacterized protein
D HNE_1529 conserved hypothetical protein K09981 K09981; uncharacterized protein
D HNE_3437 conserved hypothetical protein K09982 K09982; uncharacterized protein
D HNE_1944 conserved hypothetical protein K09983 K09983; uncharacterized protein
D HNE_3183 conserved hypothetical protein K09984 K09984; uncharacterized protein
D HNE_2955 conserved hypothetical protein K09985 K09985; uncharacterized protein
D HNE_0343 conserved hypothetical protein K09986 K09986; uncharacterized protein
D HNE_0010 conserved hypothetical protein K09987 K09987; uncharacterized protein
D HNE_0494 conserved hypothetical protein K09989 K09989; uncharacterized protein
D HNE_1677 conserved domain protein K09991 K09991; uncharacterized protein
D HNE_0642 conserved hypothetical protein K07276 K07276; uncharacterized protein
D HNE_0113 conserved hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 19, 2024