+D GENES KO
#
KEGG Orthology (KO) - Lactiplantibacillus plantarum JDM1
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lpj00010]
D JDM1_1318 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JDM1_2014 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JDM1_1596 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JDM1_0293 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JDM1_0655 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JDM1_0653 gapB; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JDM1_0654 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JDM1_0538 pgm2; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM1_2535 pmg9; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM1_1614 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM1_0656 enoA1; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM1_1595 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JDM1_1607 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D JDM1_1805 pdhA; pyruvate dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JDM1_1804 pdhB; pyruvate dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JDM1_1803 pdhC; pyruvate dehydrogenase complex, E2 component; dihydrolipoamide S-acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JDM1_1802 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM1_1964 hicD3; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_1054 hicD2; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0436 ldhL1; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0908 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0314 hicD1; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_2930 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_0292 acdH; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_1399 adh1; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_2308 adh2; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_0090 oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_1454 galM2; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JDM1_2779 galM3; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JDM1_0689 galM1; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JDM1_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JDM1_2721 pck; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JDM1_1173 pbg3; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2814 pbg9; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_0370 pbg1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_0756 pbg2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2504 pbg1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2229 pbg4; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2230 pbg5; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2411 pbg6; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2899 bgl; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2802 pbg8; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2815 pbg10; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2809 pts32A; glucose PTS, EIIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2885 Phosphotransferase system IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2408 pts23A; cellobiose PTS, EIIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_0735 pts11A; PTS, EIIA (putative) K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:lpj00020]
D JDM1_1802 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM1_0917 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JDM1_1792 pycA; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JDM1_2721 pck; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JDM1_1805 pdhA; pyruvate dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JDM1_1804 pdhB; pyruvate dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JDM1_1803 pdhC; pyruvate dehydrogenase complex, E2 component; dihydrolipoamide S-acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:lpj00030]
D JDM1_2014 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JDM1_2150 gpd; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDM1_1856 conserved hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D JDM1_1292 gnd2; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JDM1_1059 gnd1; 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JDM1_1362 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JDM1_2824 tkt4; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JDM1_0893 tkt2; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JDM1_2825 tal2; putative translaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JDM1_0541 rpiA1; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JDM1_0317 rpiA2; ribose 5-phosphate epimerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JDM1_2132 xpk1; putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D JDM1_2836 xpk2; putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D JDM1_2928 rbsK3; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D JDM1_1886 rbsK2; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D JDM1_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JDM1_0397 prs1; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JDM1_1814 prs2; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JDM1_0578 2-keto-3-deoxy-6-phospho-gluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JDM1_1058 gntK; gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D JDM1_0293 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JDM1_1596 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:lpj00040]
D JDM1_0626 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JDM1_2840 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D JDM1_1362 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JDM1_2839 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D JDM1_2876 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D JDM1_2873 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D JDM1_2831 gutB; L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D JDM1_1530 ribitol-5-phosphate 2-dehydrogenase (putative) K21680 E1.1.1.137; ribulose-5-phosphate 2-dehydrogenase [EC:1.1.1.137]
D JDM1_1529 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
D JDM1_2884 conserved hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:lpj00051]
D JDM1_2906 sacK2; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JDM1_0173 sacK1; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JDM1_2592 sacK2; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JDM1_1992 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JDM1_2884 conserved hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D JDM1_2874 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D JDM1_2876 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D JDM1_2873 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D JDM1_1596 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JDM1_0217 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D JDM1_2925 srlD2; sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D JDM1_1753 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D JDM1_2831 gutB; L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D JDM1_0293 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JDM1_0655 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JDM1_0155 dak1A; glycerone kinase K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D JDM1_2596 conserved hypothetical protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D JDM1_0529 pts10B; mannose PTS, EIIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D JDM1_2595 conserved hypothetical protein K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D JDM1_2594 phosphotransferase system fructose-specific component IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D JDM1_1754 pts16ABC; fructose PTS, EIIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D JDM1_0528 pts10A; mannose PTS, EIIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D JDM1_0523 pts9AB; mannose PTS, EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D JDM1_0524 pts9C; mannose PTS, EIIC K02795 manY; mannose PTS system EIIC component
D JDM1_0525 pts9D; mannose PTS, EIID K02796 manZ; mannose PTS system EIID component
D JDM1_0216 pts2A; mannitol PTS, EIIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D JDM1_0214 pts2CB; mannitol PTS, EIICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D JDM1_2920 pts38A; sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D JDM1_1855 pts17A; glucitol/sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D JDM1_2921 pts38BC; sorbitol PTS, EIIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D JDM1_2922 pts38C; sorbitol PTS, EIIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:lpj00052]
D JDM1_1454 galM2; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JDM1_2779 galM3; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JDM1_0689 galM1; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JDM1_2774 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JDM1_2772 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JDM1_2773 galE4; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM1_0585 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM1_1762 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM1_0626 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JDM1_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JDM1_1318 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JDM1_2775 lacL; beta-galactosidase, large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JDM1_2776 lacM; beta-galactosidase, small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JDM1_2762 lacA; beta-galactosidase I K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D JDM1_2777 melA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D JDM1_0174 melA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D JDM1_2834 pts35A; galactitol PTS, EIIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D JDM1_2880 pts36A; galactitol PTS, EIIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D JDM1_2833 pts35B; galactitol PTS, EIIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D JDM1_2881 pts36B; galactitol PTS, EIIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D JDM1_2882 pts36C; galactitol PTS, EIIC K02775 gatC; galactitol PTS system EIIC component
D JDM1_2832 galactitol PTS, EIIC K02775 gatC; galactitol PTS system EIIC component
D JDM1_1596 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JDM1_0176 sacA; beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D JDM1_2821 agl5; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JDM1_0163 agl1; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JDM1_0178 agl2; alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D JDM1_0181 agl3; alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D JDM1_2897 agl6; alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D JDM1_2122 pts19A; N-acetylglucosamine/galactosamine PTS, EIIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D JDM1_2125 pts19B; N-acetylgalactosamine-specific PTS system transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-]
D JDM1_2124 pts19C; N-acetylgalactosamine PTS, EIIC K10985 agaC; galactosamine PTS system EIIC component
D JDM1_2123 pts19D; N-acetylgalactosamine-specific PTS system transporter subunit IID K10986 agaD; galactosamine PTS system EIID component
C 00053 Ascorbate and aldarate metabolism [PATH:lpj00053]
D JDM1_0575 conserved hypothetical protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D JDM1_2828 conserved hypothetical protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D JDM1_2827 pts34B; PTS, EIIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D JDM1_0576 conserved hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D JDM1_2826 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D JDM1_0577 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D JDM1_2840 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:lpj00500]
D JDM1_2577 pts24BCA; sucrose PTS, EIIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D JDM1_2811 pts32BC; sucrose PTS, EIIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D JDM1_0175 pts1BCA; sucrose PTS, EIIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D JDM1_0176 sacA; beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D JDM1_2821 agl5; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JDM1_0163 agl1; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JDM1_0626 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JDM1_1170 pts15A; beta-glucosides PTS, EIIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JDM1_0778 conserved hypothetical protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JDM1_2231 pts20A; cellobiose PTS, EIIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JDM1_1171 pts15B; beta-glucosides PTS, EIIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JDM1_2232 pts20B; cellobiose PTS, EIIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JDM1_2409 pts23B; cellobiose PTS, EIIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JDM1_1172 pts15C; beta-glucosides PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_1006 pts14C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_2798 pts29C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0366 pts7C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0369 pts8C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_2505 pts23C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_2410 pts23C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0253 pts6C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0949 pts13C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_1173 pbg3; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2814 pbg9; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_0370 pbg1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_0756 pbg2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2504 pbg1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2229 pbg4; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2230 pbg5; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2411 pbg6; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2899 bgl; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2802 pbg8; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_2815 pbg10; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JDM1_0019 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JDM1_0020 glgD; glucose-1-phosphate adenylyltransferase, subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JDM1_0021 glgA; starch (glycogen) synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JDM1_0018 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JDM1_0022 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D JDM1_0168 amy2; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D JDM1_2211 glucan 1,4-alpha-maltohydrolase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D JDM1_0178 agl2; alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D JDM1_0181 agl3; alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D JDM1_2897 agl6; alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D JDM1_1453 map3; maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D JDM1_0170 map2; maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D JDM1_0025 pgmB1; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D JDM1_0075 pgmB2; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D JDM1_2809 pts32A; glucose PTS, EIIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2885 Phosphotransferase system IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2408 pts23A; cellobiose PTS, EIIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_0735 pts11A; PTS, EIIA (putative) K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2889 pts18CBA; N-acetylglucosamine and glucose PTS, EIICBA K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D JDM1_2893 pts18CBA; N-acetylglucosamine and glucose PTS, EIICBA K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D JDM1_2890 mannose-6-phosphate isomerase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D JDM1_2894 mannose-6-phosphate isomerase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D JDM1_2818 map4; maltose phosphorylase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D JDM1_0235 treA; alpha, alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D JDM1_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JDM1_1318 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JDM1_2014 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JDM1_2906 sacK2; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JDM1_0173 sacK1; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JDM1_2592 sacK2; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lpj00520]
D JDM1_2914 conserved hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D JDM1_2809 pts32A; glucose PTS, EIIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2885 Phosphotransferase system IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2408 pts23A; cellobiose PTS, EIIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_0735 pts11A; PTS, EIIA (putative) K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2038 pts18CBA; N-acetylglucosamine and glucose PTS, EIICBA K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D JDM1_2378 pts22CBA; N-acetylglucosamine PTS, EIICBA K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D JDM1_0459 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D JDM1_0209 gnp; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D JDM1_2906 sacK2; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JDM1_0173 sacK1; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JDM1_2592 sacK2; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JDM1_0684 glmS1; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JDM1_0683 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D JDM1_0395 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JDM1_2799 N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D JDM1_2812 murQ; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D JDM1_2830 gph3; phosphoglycolate phosphatase (putative) K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D JDM1_0726 gph1; phosphoglycolate phosphatase (putative) K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D JDM1_1974 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDM1_0412 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDM1_0677 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JDM1_2853 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D JDM1_2852 nanA; N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D JDM1_1015 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JDM1_1318 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JDM1_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JDM1_0626 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JDM1_2774 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JDM1_2772 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JDM1_2773 galE4; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM1_0585 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM1_1762 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM1_0528 pts10A; mannose PTS, EIIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D JDM1_0523 pts9AB; mannose PTS, EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D JDM1_0524 pts9C; mannose PTS, EIIC K02795 manY; mannose PTS system EIIC component
D JDM1_0525 pts9D; mannose PTS, EIID K02796 manZ; mannose PTS system EIID component
D JDM1_2014 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JDM1_1992 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JDM1_0019 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JDM1_0020 glgD; glucose-1-phosphate adenylyltransferase, subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:lpj00620]
D JDM1_1805 pdhA; pyruvate dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JDM1_1804 pdhB; pyruvate dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JDM1_1803 pdhC; pyruvate dehydrogenase complex, E2 component; dihydrolipoamide S-acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JDM1_1802 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM1_2659 pflB2; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D JDM1_2930 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_0292 acdH; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_1399 adh1; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_2308 adh2; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_0090 oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_0195 ack1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM1_0275 ack2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM1_1879 ack3; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM1_0671 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JDM1_1595 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JDM1_1413 accA2; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JDM1_0534 accA1; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JDM1_1409 accB2; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM1_0531 accB1; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM1_0324 accB3; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM1_1411 accC2; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JDM1_0532 accC1; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JDM1_1412 accD2; acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JDM1_0533 accD1; acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JDM1_1301 acylphosphatase (putative) K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JDM1_0709 putative pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D JDM1_0707 pox1; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D JDM1_0710 putative pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D JDM1_2109 pox3; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D JDM1_2868 pox4; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D JDM1_2870 pox5; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D JDM1_1964 hicD3; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_1054 hicD2; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0436 ldhL1; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0908 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0314 hicD1; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_1719 ldhD; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D JDM1_0728 bifunctional protein: amino acid aminotransferase; 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D JDM1_0105 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D JDM1_0911 mae; malic enzyme, NAD-dependent K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JDM1_1792 pycA; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JDM1_0917 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JDM1_0922 mleS; malate dehydrogenase K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D JDM1_2721 pck; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JDM1_1607 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lpj00630]
D JDM1_0257 oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D JDM1_2859 kat; catalase K03781 katE; catalase [EC:1.11.1.6]
D JDM1_1627 gph2; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D JDM1_1325 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM1_1985 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDM1_1802 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM1_1968 gcsH2; glycine cleavage system, H protein K02437 gcvH; glycine cleavage system H protein
D JDM1_0270 gcsH1; glycine cleavage system, H protein K02437 gcvH; glycine cleavage system H protein
D JDM1_2619 glyK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JDM1_0901 ttdA; tartrate dehydratase subunit alpha K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32]
D JDM1_0900 ttdB; L(+)-tartrate dehydratase subunit beta K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32]
D JDM1_0578 2-keto-3-deoxy-6-phospho-gluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:lpj00640]
D JDM1_0195 ack1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM1_0275 ack2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM1_1879 ack3; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM1_0671 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JDM1_1802 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM1_2659 pflB2; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D JDM1_1413 accA2; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JDM1_0534 accA1; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JDM1_1409 accB2; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM1_0531 accB1; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM1_0324 accB3; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM1_1411 accC2; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JDM1_0532 accC1; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JDM1_1412 accD2; acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JDM1_0533 accD1; acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JDM1_1964 hicD3; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_1054 hicD2; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0436 ldhL1; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0908 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0314 hicD1; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_2434 dhaT; 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
C 00650 Butanoate metabolism [PATH:lpj00650]
D JDM1_2930 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_0292 acdH; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_2723 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D JDM1_2465 gabD; succinate-semialdehyde dehydrogenase NADP+ K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDM1_2659 pflB2; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D JDM1_1727 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D JDM1_0834 als; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM1_1694 aldB; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:lpj00660]
D JDM1_0834 als; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM1_1694 aldB; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00562 Inositol phosphate metabolism [PATH:lpj00562]
D JDM1_1799 suhB; myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JDM1_2094 oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D JDM1_0655 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lpj00190]
D JDM1_0881 ndh2; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JDM1_0278 ndh1; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JDM1_0927 cydA; cytochrome D ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JDM1_0928 cydB; cytochrome D ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JDM1_1978 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JDM1_1976 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JDM1_1977 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JDM1_1979 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JDM1_1975 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JDM1_1982 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JDM1_1980 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JDM1_1981 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JDM1_1613 mntA; cadmium-/manganese-transporting P-type ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1]
D JDM1_1545 putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D JDM1_0701 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:lpj00680]
D JDM1_1985 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDM1_1614 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM1_0656 enoA1; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM1_0155 dak1A; glycerone kinase K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D JDM1_0293 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JDM1_1596 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JDM1_0195 ack1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM1_0275 ack2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM1_1879 ack3; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM1_0671 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JDM1_1607 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D JDM1_0538 pgm2; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM1_2535 pmg9; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM1_0188 serA1; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JDM1_0189 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:lpj00910]
D JDM1_1237 narK; nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JDM1_1253 narG; nitrate reductase, alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D JDM1_1254 narH; nitrate reductase, beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D JDM1_1256 narI; nitrate reductase, gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D JDM1_1013 gdh; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JDM1_1325 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM1_2193 cah; carbonate dehydratase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:lpj00920]
D JDM1_1156 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JDM1_1157 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D JDM1_1158 exopolyphosphatase-related protein (putative) K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D JDM1_1911 exopolyphosphatase-related protein (putative) K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D JDM1_0226 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JDM1_0228 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JDM1_2043 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D JDM1_2113 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lpj00061]
D JDM1_1413 accA2; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JDM1_0534 accA1; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JDM1_1409 accB2; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM1_0531 accB1; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM1_0324 accB3; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM1_1411 accC2; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JDM1_0532 accC1; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JDM1_1412 accD2; acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JDM1_0533 accD1; acetyl-CoA carboxylase, carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JDM1_1405 acpA2; acyl carrier protein K02078 acpP; acyl carrier protein
D JDM1_1369 acpA1; acyl carrier protein K02078 acpP; acyl carrier protein
D JDM1_1406 fabD; (acyl-carrier protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JDM1_1404 fabH2; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JDM1_0530 fabH1; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JDM1_1408 fabF; 3-oxoacyl-(acyl-carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JDM1_1407 fabG1; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_2218 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_0149 short-chain dehydrogenase/oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_1403 fabZ1; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JDM1_1410 fabZ2; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JDM1_1414 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JDM1_0759 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D JDM1_2930 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_0292 acdH; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_1399 adh1; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_2308 adh2; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_0090 oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:lpj00121]
D JDM1_2822 bsh1; choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lpj00561]
D JDM1_2619 glyK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JDM1_0155 dak1A; glycerone kinase K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D JDM1_0157 dak1B; glycerone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D JDM1_0158 dak2; dihydroxyacetone kinase phosphatase domain-containing protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D JDM1_0159 conserved hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D JDM1_0694 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JDM1_0332 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JDM1_1368 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JDM1_1549 integral membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JDM1_1722 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JDM1_0945 putative lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JDM1_1078 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D JDM1_1537 glycosyltransferase (putative) K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D JDM1_1084 alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D JDM1_2074 alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D JDM1_2777 melA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D JDM1_0174 melA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D JDM1_2434 dhaT; 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
C 00564 Glycerophospholipid metabolism [PATH:lpj00564]
D JDM1_0625 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JDM1_0333 glpD; glycerol-3-phosphate dehydrogenase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21]
D JDM1_1549 integral membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JDM1_1722 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JDM1_1056 tagD2; glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D JDM1_0945 putative lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JDM1_1960 glpQ3; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JDM1_1322 glpQ2; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JDM1_2075 glpQ4; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JDM1_1123 glpQ1; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JDM1_1712 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JDM1_1927 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D JDM1_2627 cls; cardiolipin synthetase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:lpj00600]
D JDM1_2775 lacL; beta-galactosidase, large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JDM1_2776 lacM; beta-galactosidase, small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JDM1_2777 melA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D JDM1_0174 melA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D JDM1_2914 conserved hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lpj00230]
D JDM1_2216 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JDM1_1828 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JDM1_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JDM1_0397 prs1; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JDM1_1814 prs2; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JDM1_2182 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JDM1_2178 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D JDM1_2180 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JDM1_2183 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D JDM1_2185 purS; purine biosynthesis cluster protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D JDM1_2184 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDM1_2181 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D JDM1_2187 purK1; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D JDM1_0938 purK2; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D JDM1_2188 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JDM1_2186 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D JDM1_2623 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JDM1_2179 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JDM1_1086 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JDM1_1745 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JDM1_0444 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D JDM1_2556 guaC; guanosine 5'-monophosphate oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JDM1_0223 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JDM1_2647 xtp2; xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JDM1_1900 xtp1; xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JDM1_0936 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D JDM1_0761 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JDM1_2625 guaC; guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D JDM1_1352 gmk1; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D JDM1_0722 gmk2; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D JDM1_0566 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JDM1_0565 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDM1_2351 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D JDM1_1676 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JDM1_0700 ppx2; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D JDM1_0374 ppx1; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D JDM1_0702 ppx3; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D JDM1_1860 GTP pyrophosphokinase (putative) K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D JDM1_0259 GTP pyrophosphokinase (putative) K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D JDM1_2624 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JDM1_2672 adeC; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D JDM1_2710 2',3'-cyclic-nucleotide 2'-phosphodiesterase, putative K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D JDM1_1923 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JDM1_0871 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JDM1_1157 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D JDM1_1156 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:lpj00240]
D JDM1_2165 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDM1_0426 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDM1_1500 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDM1_2166 pyrAA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDM1_0427 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDM1_1499 pyrAA2; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDM1_2168 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JDM1_2167 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JDM1_2164 pyrD; dihydroorotate dehydrogenase 1B K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D JDM1_2162 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JDM1_2163 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D JDM1_1715 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JDM1_0223 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JDM1_0405 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JDM1_1583 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D JDM1_1308 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D JDM1_1984 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D JDM1_2169 pyrR1; pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JDM1_1498 pyrR2; pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JDM1_2710 2',3'-cyclic-nucleotide 2'-phosphodiesterase, putative K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D JDM1_1923 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JDM1_2351 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D JDM1_0566 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JDM1_0565 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDM1_1785 comEB; dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D JDM1_0579 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JDM1_0543 dut; trimetaphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JDM1_1989 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D JDM1_1572 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lpj00250]
D JDM1_1277 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D JDM1_2195 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JDM1_0794 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D JDM1_2460 asnB2; asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JDM1_0813 asnB1; asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JDM1_0363 conserved hypothetical protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D JDM1_2272 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D JDM1_0642 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JDM1_0643 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JDM1_2624 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JDM1_2623 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JDM1_2168 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JDM1_2723 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D JDM1_2465 gabD; succinate-semialdehyde dehydrogenase NADP+ K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDM1_1013 gdh; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JDM1_1325 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM1_2165 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDM1_0426 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDM1_1500 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDM1_2166 pyrAA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDM1_0427 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDM1_1499 pyrAA2; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDM1_2184 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDM1_0684 glmS1; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JDM1_2182 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:lpj00260]
D JDM1_1931 thrA2; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM1_0812 thrA1; aspartate kinase I K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM1_2067 asd2; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDM1_2041 hom1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDM1_0468 hom2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDM1_0469 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D JDM1_2212 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JDM1_1985 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDM1_2619 glyK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JDM1_0538 pgm2; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM1_2535 pmg9; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM1_0188 serA1; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JDM1_0189 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JDM1_1802 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM1_1968 gcsH2; glycine cleavage system, H protein K02437 gcvH; glycine cleavage system H protein
D JDM1_0270 gcsH1; glycine cleavage system, H protein K02437 gcvH; glycine cleavage system H protein
D JDM1_0408 sdhB; L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JDM1_0409 sdhA; L-serine dehydratase, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JDM1_2228 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D JDM1_1393 trpB; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JDM1_1392 trpA; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:lpj00270]
D JDM1_0226 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JDM1_0228 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JDM1_0227 metC1; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM1_2207 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM1_2806 metC2; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM1_2316 patB; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM1_1098 mmuM; homocysteine methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D JDM1_1153 metH; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D JDM1_1154 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JDM1_1101 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JDM1_1826 mtn; methylthioadenosine nucleosidase; S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D JDM1_0306 transaminase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D JDM1_1948 signal protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D JDM1_0641 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D JDM1_1931 thrA2; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM1_0812 thrA1; aspartate kinase I K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM1_2067 asd2; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDM1_2041 hom1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDM1_0468 hom2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDM1_2043 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D JDM1_2113 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JDM1_2042 metY; O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D JDM1_1995 bcaT; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDM1_1944 gshA; glutamate-cysteine ligase (putative) K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D JDM1_1954 bifunctional glutamate--cysteine ligase/glutathione synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D JDM1_1964 hicD3; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_1054 hicD2; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0436 ldhL1; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0908 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0314 hicD1; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0408 sdhB; L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JDM1_0409 sdhA; L-serine dehydratase, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JDM1_0188 serA1; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JDM1_0189 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:lpj00280]
D JDM1_1995 bcaT; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDM1_1802 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM1_2049 hibD; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JDM1_1727 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lpj00290]
D JDM1_0834 als; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM1_1995 bcaT; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:lpj00300]
D JDM1_2041 hom1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDM1_0468 hom2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDM1_1931 thrA2; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM1_0812 thrA1; aspartate kinase I K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM1_2067 asd2; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDM1_2153 dapA2; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JDM1_1779 dapA1; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JDM1_1576 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JDM1_0431 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JDM1_1617 dapE1; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JDM1_2292 dapE2; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JDM1_1829 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JDM1_1442 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JDM1_1897 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D JDM1_2152 araT2; aromatic amino acid specific aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D JDM1_1082 araT1; aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D JDM1_0727 bifunctional protein: amino acid aminotransferase; 2-hydroxyacid dehydrogenase K00841 patA; aminotransferase [EC:2.6.1.-]
D JDM1_1896 amino acid amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D JDM1_2568 aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D JDM1_0811 murE1; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diami nopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JDM1_0420 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:lpj00310]
D JDM1_1802 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM1_2465 gabD; succinate-semialdehyde dehydrogenase NADP+ K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:lpj00220]
D JDM1_0432 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JDM1_0642 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JDM1_0643 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JDM1_2184 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDM1_1325 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM1_1013 gdh; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JDM1_0429 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D JDM1_0430 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D JDM1_0428 argC2; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D JDM1_0431 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:lpj00330]
D JDM1_0458 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D JDM1_0015 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JDM1_0016 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D JDM1_2340 pepR2; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JDM1_0093 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JDM1_0711 pepR1; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JDM1_0094 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:lpj00340]
D JDM1_2060 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D JDM1_2061 hisX; histidine-tRNA ligase (putative) K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D JDM1_2053 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D JDM1_2054 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D JDM1_2056 hisA; phosphoribosylformimino-5-aminoimidazole carboxamideribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D JDM1_2057 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D JDM1_2055 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D JDM1_2058 hisB; imidazole glycerol phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D JDM1_2052 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM1_2062 hisK; histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D JDM1_2059 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D JDM1_1191 fumarate reductase, flavoprotein subunit precursor K17363 urdA; urocanate reductase [EC:1.3.99.33]
C 00350 Tyrosine metabolism [PATH:lpj00350]
D JDM1_2052 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM1_2930 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_0292 acdH; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_1399 adh1; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_2308 adh2; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_0090 oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_0079 4-hydroxyphenylacetate-3-hydroxylase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D JDM1_2934 2-oxo-hept-3-ene-1; 2-oxo-hept-4-ene-1,7-dioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D JDM1_2465 gabD; succinate-semialdehyde dehydrogenase NADP+ K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDM1_2435 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00360 Phenylalanine metabolism [PATH:lpj00360]
D JDM1_2052 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM1_2435 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00380 Tryptophan metabolism [PATH:lpj00380]
D JDM1_1802 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM1_2859 kat; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lpj00400]
D JDM1_0895 aroA; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JDM1_0896 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D JDM1_2785 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D JDM1_2247 aroC1; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D JDM1_1697 aroI; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D JDM1_1699 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D JDM1_1701 aroF; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D JDM1_1386 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JDM1_1387 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JDM1_1388 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JDM1_1389 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D JDM1_1391 trpF; phosphorybosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D JDM1_1390 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D JDM1_1393 trpB; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JDM1_1392 trpA; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D JDM1_1698 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JDM1_2052 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D JDM1_2723 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
C 00430 Taurine and hypotaurine metabolism [PATH:lpj00430]
D JDM1_2723 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D JDM1_0671 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JDM1_0195 ack1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM1_0275 ack2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM1_1879 ack3; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:lpj00440]
D JDM1_0587 phnX; phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D JDM1_0586 phnW; (2-aminoethyl)phosphonate--pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:lpj00450]
D JDM1_2113 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JDM1_0227 metC1; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM1_2207 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM1_2806 metC2; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM1_2316 patB; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM1_1153 metH; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D JDM1_1154 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JDM1_1227 csd1; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D JDM1_0630 trxB1; thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JDM1_1156 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JDM1_0380 metS; methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:lpj00460]
D JDM1_2195 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JDM1_0794 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D JDM1_1985 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:lpj00470]
D JDM1_0423 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JDM1_1961 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDM1_1687 dltA; D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D JDM1_1176 dltC2; D-alanine-poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JDM1_1685 dltC1; D-alanine-poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JDM1_2184 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDM1_1901 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JDM1_1839 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JDM1_1277 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D JDM1_2228 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D JDM1_1829 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JDM1_1442 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:lpj00480]
D JDM1_1944 gshA; glutamate-cysteine ligase (putative) K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D JDM1_1954 bifunctional glutamate--cysteine ligase/glutathione synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D JDM1_0780 pepN; membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JDM1_1060 gshR2; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D JDM1_2620 gshR4; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D JDM1_1535 gshR3; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D JDM1_0331 gshR1; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D JDM1_1292 gnd2; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JDM1_1059 gnd1; 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JDM1_2150 gpd; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDM1_0204 gpo; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:lpj00511]
D JDM1_2775 lacL; beta-galactosidase, large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JDM1_2776 lacM; beta-galactosidase, small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JDM1_2914 conserved hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D JDM1_2901 alpha-mannosidase (putative) K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:lpj00542]
D JDM1_0603 tagO; undecaprenyl-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lpj00541]
D JDM1_0626 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JDM1_2773 galE4; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM1_0585 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM1_1762 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM1_1032 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDM1_1034 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDM1_1033 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JDM1_1035 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D JDM1_1992 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JDM1_0395 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JDM1_1015 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:lpj00550]
D JDM1_1974 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDM1_0412 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDM1_0677 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JDM1_1222 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JDM1_1839 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JDM1_0811 murE1; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diami nopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JDM1_1961 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDM1_0420 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JDM1_1659 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D JDM1_1713 uppS; di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JDM1_2715 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDM1_1111 phosphatase (putative) K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDM1_1840 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JDM1_1838 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JDM1_1473 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JDM1_1182 pbp2A; penicillin binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D JDM1_1841 pbp2B2; penicillin binding protein 2B K08724 pbpB; penicillin-binding protein 2B
D JDM1_1314 pbp2B1; penicillin binding protein 2B K21465 pbpA; penicillin-binding protein A
D JDM1_1081 dacA2; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM1_2551 dacA1; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM1_0836 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JDM1_1990 UDP-N-acetylmuramyl tripeptide synthase (putative) K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D JDM1_1991 cobQ; cobyric acid synthase (putative) K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:lpj00552]
D JDM1_2715 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDM1_1111 phosphatase (putative) K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDM1_0603 tagO; undecaprenyl-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JDM1_0461 tagA; teichoic acid biosynthesis protein A K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D JDM1_1099 tagE1; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_1106 tagE2; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_1107 tagE3; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_2011 tagE4; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_2280 tagE5; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_2282 tagE6; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_1687 dltA; D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D JDM1_1176 dltC2; D-alanine-poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JDM1_1685 dltC1; D-alanine-poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JDM1_1686 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D JDM1_1684 dltD; D-alanyl transfer protein DltD K03740 dltD; D-alanine transfer protein
D JDM1_0256 transcription regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D JDM1_0535 transcription regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D JDM1_0829 transcription regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D JDM1_1532 tagB2; teichoic acid biosynthesis protein K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
D JDM1_1084 alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D JDM1_2074 alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D JDM1_1078 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D JDM1_1079 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D JDM1_0703 licD; lipopolysaccharide biosynthesis protein LicD K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:lpj00543]
D JDM1_0603 tagO; undecaprenyl-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JDM1_2176 ica3; glycosyltransferase (putative) K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D JDM1_1795 ica2; glycosyltransferase (putative) K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D JDM1_1278 ica1; glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D JDM1_0226 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lpj00730]
D JDM1_0114 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D JDM1_1946 csd3; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM1_1825 csd2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM1_1945 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JDM1_2097 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JDM1_0113 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D JDM1_0115 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D JDM1_1420 GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JDM1_1361 translation factor, GTPase (putative) K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JDM1_1363 conserved hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D JDM1_0871 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:lpj00740]
D JDM1_1200 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JDM1_1198 Pyrimidine reductase, riboflavin biosynthesis K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JDM1_1449 HAD superfamily hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D JDM1_1201 ribH; riboflavin synthase, beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D JDM1_1199 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D JDM1_1695 ribC2; bifunctional protein: riboflavin kinase; FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JDM1_0708 ribC1; bifunctional protein: riboflavin kinase; FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JDM1_0692 nitro/flavin reductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D JDM1_0113 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D JDM1_2216 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JDM1_1828 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:lpj00750]
D JDM1_0719 pdx; pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D JDM1_0134 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D JDM1_0189 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JDM1_2212 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:lpj00760]
D JDM1_0462 nadC1; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JDM1_2224 natC2; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JDM1_1283 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JDM1_2498 pyrophosphatase (putative) K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D JDM1_0463 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D JDM1_0377 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D JDM1_1859 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D JDM1_2465 gabD; succinate-semialdehyde dehydrogenase NADP+ K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:lpj00770]
D JDM1_0834 als; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM1_2039 panE1; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D JDM1_2238 panE2; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D JDM1_0305 panE2; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D JDM1_0760 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D JDM1_1354 dfp; pantothenate metabolism flavoprotein Dfp K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D JDM1_1789 kdtB; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JDM1_1264 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JDM1_0422 acpS; holo-(acyl-carrier protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JDM1_1415 phosphopantetheinyltransferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D JDM1_1995 bcaT; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:lpj00780]
D JDM1_1408 fabF; 3-oxoacyl-(acyl-carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JDM1_1407 fabG1; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_2218 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_0149 short-chain dehydrogenase/oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_1403 fabZ1; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JDM1_1410 fabZ2; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JDM1_1414 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JDM1_0712 birA2; biotin-(acetyl-CoA-carboxylase)ligase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JDM1_0301 birA1; biotin-(acetyl-CoA-carboxylase)ligase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:lpj00785]
D JDM1_0402 conserved hypothetical protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D JDM1_2119 lplA1; lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D JDM1_2191 lplA2; lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D JDM1_1802 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM1_1805 pdhA; pyruvate dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JDM1_1804 pdhB; pyruvate dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JDM1_1803 pdhC; pyruvate dehydrogenase complex, E2 component; dihydrolipoamide S-acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JDM1_1968 gcsH2; glycine cleavage system, H protein K02437 gcvH; glycine cleavage system H protein
D JDM1_0270 gcsH1; glycine cleavage system, H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:lpj00790]
D JDM1_2651 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D JDM1_2650 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D JDM1_2646 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JDM1_1571 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JDM1_1941 folC1; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D JDM1_2648 folC2; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D JDM1_1200 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JDM1_0062 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D JDM1_1236 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JDM1_1248 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JDM1_1234 moaE; molybdopterin biosynthesis protein, E chain K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D JDM1_1251 moaB; molybdopterin biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JDM1_1250 moeA; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JDM1_1247 mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA (putative) K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:lpj00670]
D JDM1_1571 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JDM1_1495 fhs; formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D JDM1_1340 folD; bifunctional protein: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JDM1_1985 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDM1_2180 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JDM1_2179 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JDM1_1356 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JDM1_1153 metH; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D JDM1_1572 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JDM1_1315 fthC; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:lpj00860]
D JDM1_1096 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lpj00130]
D JDM1_2734 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D JDM1_1443 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D JDM1_0933 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D JDM1_1296 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D JDM1_2590 conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lpj00900]
D JDM1_2097 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JDM1_0389 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D JDM1_1727 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D JDM1_0375 mvaA; hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D JDM1_1458 mvaK1; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D JDM1_1456 mvaK2; phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D JDM1_1457 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D JDM1_1455 idi1; isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D JDM1_1343 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JDM1_1713 uppS; di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:lpj00906]
D JDM1_2616 crtN; squalene synthase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D JDM1_2617 crtM; phytoene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JDM1_2824 tkt4; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JDM1_0893 tkt2; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:lpj00523]
D JDM1_1032 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDM1_1034 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDM1_1033 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JDM1_1035 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:lpj01054]
D JDM1_1277 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D JDM1_1034 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:lpj00946]
D JDM1_2764 ram1; alpha-L-rhamnosidase (putative) K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D JDM1_2766 ram2; alpha-L-rhamnosidase (putative) K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:lpj00311]
D JDM1_0076 bsh2; choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D JDM1_2068 bsh4; choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D JDM1_2695 bsh3; choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D JDM1_0396 bla1; beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D JDM1_1958 bla2; beta-lactamase (putative) K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:lpj00332]
D JDM1_0015 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JDM1_0016 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:lpj00261]
D JDM1_1156 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JDM1_1931 thrA2; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM1_0812 thrA1; aspartate kinase I K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM1_2067 asd2; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDM1_2153 dapA2; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JDM1_1779 dapA1; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JDM1_1576 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:lpj00521]
D JDM1_1318 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JDM1_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JDM1_1799 suhB; myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JDM1_1032 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDM1_1034 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDM1_1033 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JDM1_1035 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JDM1_1318 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:lpj00525]
D JDM1_1032 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDM1_1034 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:lpj00401]
D JDM1_1698 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JDM1_2052 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D JDM1_1386 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JDM1_1387 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JDM1_1388 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D JDM1_1406 fabD; (acyl-carrier protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JDM1_1407 fabG1; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_2218 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_0149 short-chain dehydrogenase/oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_1414 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D JDM1_1405 acpA2; acyl carrier protein K02078 acpP; acyl carrier protein
D JDM1_1369 acpA1; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D JDM1_1101 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:lpj00362]
D JDM1_1441 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D JDM1_2507 4-carboxymuconolactone decarboxylase (putative) K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D JDM1_2289 4-carboxymuconolactone decarboxylase (putative) K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
C 00627 Aminobenzoate degradation [PATH:lpj00627]
D JDM1_1301 acylphosphatase (putative) K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JDM1_2360 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59]
D JDM1_0239 vdcB; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K22959 lpdB; gallate decarboxylase subunit B
D JDM1_0240 conserved hypothetical protein K22960 lpdD; gallate decarboxylase subunit D
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:lpj00625]
D JDM1_1399 adh1; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_2308 adh2; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_0090 oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_2930 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_0292 acdH; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_2274 2-haloacid dehalogenase (putative) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D JDM1_2274 2-haloacid dehalogenase (putative) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
D JDM1_2435 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00622 Xylene degradation [PATH:lpj00622]
D JDM1_2435 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D JDM1_1441 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D JDM1_1441 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:lpj00626]
D JDM1_1399 adh1; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_2308 adh2; alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_0090 oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM1_2930 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JDM1_0292 acdH; acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lpj03020]
D JDM1_0842 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JDM1_0843 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JDM1_0876 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JDM1_1353 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JDM1_0404 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
D JDM1_0273 DNA helicase (putative) K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lpj03010]
D JDM1_1582 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JDM1_1717 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JDM1_0856 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JDM1_1949 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JDM1_0867 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JDM1_0007 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JDM1_0846 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JDM1_0864 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JDM1_0889 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JDM1_0849 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JDM1_0875 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JDM1_0845 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JDM1_0874 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JDM1_0863 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JDM1_1853 rpsN2; ribosomal protein S14-2 K02954 RP-S14; small subunit ribosomal protein S14
D JDM1_1781 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JDM1_1375 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JDM1_0859 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JDM1_0009 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JDM1_0854 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JDM1_1782 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JDM1_1663 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JDM1_0557 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JDM1_0853 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JDM1_0850 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JDM1_0851 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JDM1_0862 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JDM1_0865 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JDM1_0559 rplL; ribosomal protein L12/L7 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JDM1_0011 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JDM1_0558 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JDM1_0556 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JDM1_0888 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JDM1_0860 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JDM1_0869 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JDM1_0857 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JDM1_0877 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JDM1_0866 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JDM1_1379 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JDM1_1271 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JDM1_1333 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JDM1_0855 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JDM1_0852 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JDM1_0861 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JDM1_1335 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JDM1_1364 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JDM1_0858 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JDM1_0868 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JDM1_0414 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JDM1_1289 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JDM1_0552 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JDM1_1270 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JDM1_0873 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JDM1_rRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA09 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lpj00970]
D JDM1_tRNA62 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JDM1_tRNA08 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM1_tRNA14 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM1_tRNA49 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM1_tRNA34 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM1_tRNA17 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM1_tRNA01 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDM1_tRNA09 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDM1_tRNA03 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDM1_tRNA19 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDM1_tRNA33 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JDM1_tRNA43 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JDM1_tRNA36 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JDM1_tRNA28 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JDM1_tRNA27 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JDM1_tRNA60 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JDM1_tRNA06 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JDM1_tRNA21 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JDM1_tRNA38 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JDM1_tRNA59 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JDM1_tRNA41 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM1_tRNA12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM1_tRNA51 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM1_tRNA32 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM1_tRNA26 tRNA-His K14226 tRNA-His; tRNA His
D JDM1_tRNA30 tRNA-His K14226 tRNA-His; tRNA His
D JDM1_tRNA40 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JDM1_tRNA13 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA50 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA29 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA07 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA10 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA02 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JDM1_tRNA53 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JDM1_tRNA56 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JDM1_tRNA47 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM1_tRNA46 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM1_tRNA37 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM1_tRNA44 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM1_tRNA23 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JDM1_tRNA42 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JDM1_tRNA15 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM1_tRNA48 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM1_tRNA16 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM1_tRNA45 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM1_tRNA35 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM1_tRNA39 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM1_tRNA20 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM1_tRNA61 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM1_tRNA04 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM1_tRNA52 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM1_tRNA11 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM1_tRNA25 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JDM1_tRNA18 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JDM1_tRNA05 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JDM1_tRNA24 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JDM1_tRNA54 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM1_tRNA57 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM1_tRNA22 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM1_tRNA55 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM1_tRNA58 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM1_0546 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JDM1_0943 gatA; glutamyl-tRNA amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JDM1_0944 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JDM1_0942 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JDM1_1909 alaS; alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JDM1_1670 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDM1_0793 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JDM1_1462 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JDM1_1656 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JDM1_1655 glyS; glycine-tRNA ligase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JDM1_1268 thrS; threonine-tRNA ligase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JDM1_0406 serS1; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDM1_0838 serS2; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDM1_0547 cysS; cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JDM1_0380 metS; methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JDM1_1356 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JDM1_1942 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JDM1_1112 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDM1_1830 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JDM1_0448 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JDM1_1164 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDM1_1710 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JDM1_1671 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JDM1_1305 pheS; phenylalanine-tRNA ligase, alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JDM1_1306 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JDM1_2254 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDM1_0364 trpS; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lpj03060]
D JDM1_0870 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JDM1_0553 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JDM1_0659 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JDM1_1913 preprotein translocase, subunit (putative) K03210 yajC; preprotein translocase subunit YajC
D JDM1_2949 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM1_1300 integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM1_0609 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM1_1374 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JDM1_1372 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D JDM1_2939 sip3; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JDM1_2298 sip1; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JDM1_2299 sip2; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JDM1_1496 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lpj04122]
D JDM1_1946 csd3; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM1_1825 csd2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM1_1823 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JDM1_1234 moaE; molybdopterin biosynthesis protein, E chain K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D JDM1_1236 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JDM1_1235 moaD; molybdopterin biosynthesis protein, D chain K03636 moaD; sulfur-carrier protein
D JDM1_1252 moeB; molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D JDM1_1248 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JDM1_1251 moaB; molybdopterin biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JDM1_1945 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:lpj03018]
D JDM1_1614 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM1_0656 enoA1; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM1_0661 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JDM1_0421 rhe1; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JDM1_0798 recQ1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JDM1_1585 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JDM1_0413 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JDM1_1924 phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JDM1_1809 metallo-beta-lactamase superfamily protein (putative) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JDM1_1778 metallo-beta-lactamase superfamily protein (putative) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JDM1_1596 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JDM1_1691 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JDM1_0601 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM1_0701 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lpj03030]
D JDM1_0674 DNA-directed DNA polymerase III, epsilon chain (putative) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM1_1597 dnaE; DNA-directed DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDM1_1709 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JDM1_0570 dnaX; DNA-directed DNA polymerase III, gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDM1_0581 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDM1_1783 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDM1_0002 dnaN; DNA-directed DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDM1_0013 dnaC; replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JDM1_1654 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D JDM1_0008 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_0975 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_2082 rnh; ribonuclease H (putative) K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JDM1_1492 esbB; cell wall enzyme K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JDM1_0328 conserved hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JDM1_1557 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JDM1_1262 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM1_0940 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lpj03410]
D JDM1_2296 nth1; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JDM1_0670 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JDM1_2685 mutY; A/G-specific adenine glycosylase (putative) K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JDM1_1680 N-methylpurine-DNA glycosylase (putative) K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D JDM1_1263 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JDM1_2420 tag2; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JDM1_0262 tag1; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JDM1_2645 tag3; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JDM1_0675 exoA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JDM1_1666 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JDM1_1262 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM1_1746 recJ; single-strand DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JDM1_0940 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lpj03420]
D JDM1_0438 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JDM1_2337 uvrA3; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D JDM1_0640 uvrA1; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D JDM1_0639 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D JDM1_1767 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D JDM1_0758 DNA helicase (putative) K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM1_0939 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM1_1262 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM1_0940 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JDM1_0273 DNA helicase (putative) K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:lpj03430]
D JDM1_1922 hexA; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D JDM1_1904 mutS; DNA mismatch repair protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D JDM1_1921 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D JDM1_0758 DNA helicase (putative) K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM1_0939 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM1_1341 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JDM1_1342 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JDM1_1746 recJ; single-strand DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JDM1_0008 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_0975 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_1597 dnaE; DNA-directed DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDM1_1709 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JDM1_0002 dnaN; DNA-directed DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDM1_0570 dnaX; DNA-directed DNA polymerase III, gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDM1_1783 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDM1_0581 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDM1_0674 DNA-directed DNA polymerase III, epsilon chain (putative) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM1_0940 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:lpj03440]
D JDM1_1746 recJ; single-strand DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JDM1_0008 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_0975 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_0004 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D JDM1_1657 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JDM1_0572 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JDM1_1925 recA; recombinase A K03553 recA; recombination protein RecA
D JDM1_1262 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM1_1917 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JDM1_1916 ruvB; Holliday junction DNA helicase B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JDM1_1367 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JDM1_1815 recD; exodeoxyribonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D JDM1_1597 dnaE; DNA-directed DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDM1_1709 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JDM1_0002 dnaN; DNA-directed DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDM1_0570 dnaX; DNA-directed DNA polymerase III, gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDM1_1783 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDM1_0581 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDM1_0674 DNA-directed DNA polymerase III, epsilon chain (putative) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM1_1355 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lpj02010]
D JDM1_1471 ABC transporter, substrate binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JDM1_1470 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D JDM1_1472 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JDM1_0280 potD; spermidine/putrescine ABC transporter, substrate binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JDM1_0281 potC; spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D JDM1_0282 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D JDM1_0283 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JDM1_0329 choS; glycine betaine/carnitine/choline ABC transporter, substrate binding and permease protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D JDM1_1349 opuC; glycine betaine/carnitine/choline ABC transporter, substrate binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D JDM1_1348 opuB; glycine betaine/carnitine/choline ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D JDM1_1350 opuD; glycine betaine/carnitine/choline ABC transporter, ATP-binding protein K05846 opuBD; osmoprotectant transport system permease protein
D JDM1_1347 opuA; glycine betaine/carnitine/choline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JDM1_0330 choQ; glycine betaine/carnitine/choline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JDM1_2905 msmK2; multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JDM1_0169 msmK1; multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JDM1_0164 malE; maltose/maltodextrin ABC transporter, substrate binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D JDM1_0165 malF; maltose/maltodextrin ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JDM1_0166 malG; maltose/maltodextrin ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JDM1_2911 sugar ABC transporter, substrate binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D JDM1_2913 sugar ABC transporter, permease protein K17319 lplB; putative aldouronate transport system permease protein
D JDM1_2912 sugar ABC transporter, permease protein K17320 lplC; putative aldouronate transport system permease protein
D JDM1_2927 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D JDM1_1122 sugar ABC transporter, substrate binding protein (putative) K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D JDM1_1120 sugar ABC transporter, permease protein (putative) K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D JDM1_1121 sugar ABC transporter, permease protein (putative) K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D JDM1_1119 sugar ABC transporter, ATP-binding protein (putative) K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D JDM1_0604 pstF; phosphate ABC transporter, substrate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JDM1_0615 pstE; phosphate ABC transporter, substrate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JDM1_0616 pstD; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D JDM1_0617 pstC; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D JDM1_0618 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JDM1_0619 pstA; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JDM1_0591 phnD; phosphonates ABC transporter, substrate binding protein (putative) K02044 phnD; phosphonate transport system substrate-binding protein
D JDM1_0588 phnE1; phosphonates ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D JDM1_0589 phnE2; phosphonates ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D JDM1_0590 phnC; phosphonates ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D JDM1_0666 glnPH1; glutamine ABC transporter, substrate binding and permease protein K10036 glnH; glutamine transport system substrate-binding protein
D JDM1_0667 glnQ1; glutamine ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D JDM1_0732 glnH1; glutamine ABC transporter, substrate binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D JDM1_0733 glnM; glutamine ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D JDM1_0734 glnP; glutamine ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D JDM1_0731 glnQ2; glutamine ABC transporter, ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D JDM1_2569 amino acid ABC transporter, substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JDM1_2572 amino acid ABC transporter, substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JDM1_2570 amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D JDM1_2571 amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D JDM1_1769 glnPH2; glutamine ABC transporter, substrate binding and permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D JDM1_1768 glnQ3; glutamine ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D JDM1_2391 livA; branched-chain amino acid ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM1_2390 livB; branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D JDM1_2389 livC; branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D JDM1_2388 livD; branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JDM1_2387 livE; branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JDM1_1965 amino acid ABC transporter, substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JDM1_1468 amino acid ABC transporter, substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JDM1_0302 amino acid ABC transporter, substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JDM1_1966 amino acid ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D JDM1_1467 amino acid ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D JDM1_0304 conserved hypothetical protein K02072 metI; D-methionine transport system permease protein
D JDM1_1967 amino acid ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JDM1_1466 amino acid ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JDM1_0303 amino acid ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JDM1_1067 oppA; oligopeptide ABC transporter, substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0185 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_2948 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0097 extracellular protein, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0186 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0017 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0648 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_1068 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D JDM1_1069 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D JDM1_1070 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JDM1_1071 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JDM1_0906 mtsA; manganese ABC transporter, substrate binding protein K19975 mntC; manganese transport system substrate-binding protein
D JDM1_0905 mtsB; manganese ABC transporter, permease protein K19976 mntB; manganese transport system permease protein
D JDM1_0904 mtsC; manganese ABC transporter, ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D JDM1_0103 hypothetical protein K02007 cbiM; cobalt/nickel transport system permease protein
D JDM1_0102 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D JDM1_0101 cobalt ABC transporter, ATP-binding protein (putative) K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D JDM1_0299 integral membrane protein K03523 bioY; biotin transport system substrate-specific component
D JDM1_0140 ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D JDM1_0886 ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D JDM1_0201 ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D JDM1_0884 cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JDM1_0885 cobalt transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JDM1_0308 tagG; teichoic acid ABC transporter, permease protein K09692 tagG; teichoic acid transport system permease protein
D JDM1_0309 tagH; teichoic acid ABC transporter, ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D JDM1_0291 conserved hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D JDM1_0290 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D JDM1_1650 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D JDM1_2321 ABC transporter, ATP-binding and permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_2916 ABC transporter, ATP-binding and permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_2917 ABC transporter, ATP-binding and permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_2010 ABC transporter, ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D JDM1_2375 lmrA; multidrug ABC transporter, ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D JDM1_2426 ABC transporter, ATP-binding and permease protein K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_2425 ABC transporter, ATP-binding protein K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_1999 ABC transporter, ATP-binding and permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_1998 ABC transporter, ATP-binding and permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_0354 plnG; bacteriocin ABC-transporter, ATP-binding and permease protein PlnG K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D JDM1_0930 cydD; cytochrome D ABC transporter, ATP-binding and permease protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D JDM1_0929 cydC; cytochrome D ABC transporter, ATP-binding and permease protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D JDM1_0200 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:lpj02060]
D JDM1_1077 ptsI; phosphoenolpyruvate-protein phosphatase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D JDM1_1076 hpr; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D JDM1_2809 pts32A; glucose PTS, EIIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2885 Phosphotransferase system IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2408 pts23A; cellobiose PTS, EIIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_0735 pts11A; PTS, EIIA (putative) K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2038 pts18CBA; N-acetylglucosamine and glucose PTS, EIICBA K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D JDM1_2378 pts22CBA; N-acetylglucosamine PTS, EIICBA K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D JDM1_2577 pts24BCA; sucrose PTS, EIIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D JDM1_2811 pts32BC; sucrose PTS, EIIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D JDM1_0175 pts1BCA; sucrose PTS, EIIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D JDM1_0237 pts5ABC; beta-glucosides PTS, EIIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_2600 pts28ABC; beta-glucosides PTS, EIIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_0236 pts4ABC; beta-glucosides PTS, EIIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_2816 pts33BCA; beta-glucosides PTS, EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_2586 pts27BCA; beta-glucosides PTS, EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_0755 pts12BCA; beta-glucosides PTS, EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_2803 pts30BCA; beta-glucosides PTS, EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_0737 pts11BC; beta-glucosides PTS, EIIBC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_2889 pts18CBA; N-acetylglucosamine and glucose PTS, EIICBA K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D JDM1_2893 pts18CBA; N-acetylglucosamine and glucose PTS, EIICBA K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D JDM1_0216 pts2A; mannitol PTS, EIIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D JDM1_0214 pts2CB; mannitol PTS, EIICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D JDM1_1170 pts15A; beta-glucosides PTS, EIIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JDM1_0778 conserved hypothetical protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JDM1_2231 pts20A; cellobiose PTS, EIIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JDM1_1171 pts15B; beta-glucosides PTS, EIIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JDM1_2232 pts20B; cellobiose PTS, EIIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JDM1_2409 pts23B; cellobiose PTS, EIIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JDM1_1172 pts15C; beta-glucosides PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_1006 pts14C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_2798 pts29C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0366 pts7C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0369 pts8C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_2505 pts23C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_2410 pts23C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0253 pts6C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0949 pts13C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0528 pts10A; mannose PTS, EIIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D JDM1_0523 pts9AB; mannose PTS, EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D JDM1_0524 pts9C; mannose PTS, EIIC K02795 manY; mannose PTS system EIIC component
D JDM1_0525 pts9D; mannose PTS, EIID K02796 manZ; mannose PTS system EIID component
D JDM1_2122 pts19A; N-acetylglucosamine/galactosamine PTS, EIIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D JDM1_2125 pts19B; N-acetylgalactosamine-specific PTS system transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-]
D JDM1_2124 pts19C; N-acetylgalactosamine PTS, EIIC K10985 agaC; galactosamine PTS system EIIC component
D JDM1_2123 pts19D; N-acetylgalactosamine-specific PTS system transporter subunit IID K10986 agaD; galactosamine PTS system EIID component
D JDM1_2920 pts38A; sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D JDM1_1855 pts17A; glucitol/sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D JDM1_2921 pts38BC; sorbitol PTS, EIIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D JDM1_2922 pts38C; sorbitol PTS, EIIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D JDM1_2834 pts35A; galactitol PTS, EIIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D JDM1_2880 pts36A; galactitol PTS, EIIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D JDM1_2833 pts35B; galactitol PTS, EIIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D JDM1_2881 pts36B; galactitol PTS, EIIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D JDM1_2882 pts36C; galactitol PTS, EIIC K02775 gatC; galactitol PTS system EIIC component
D JDM1_2832 galactitol PTS, EIIC K02775 gatC; galactitol PTS system EIIC component
D JDM1_0575 conserved hypothetical protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D JDM1_2828 conserved hypothetical protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D JDM1_2827 pts34B; PTS, EIIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D JDM1_0576 conserved hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D JDM1_2826 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D JDM1_0577 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D JDM1_2594 phosphotransferase system fructose-specific component IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D JDM1_1754 pts16ABC; fructose PTS, EIIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D JDM1_0529 pts10B; mannose PTS, EIIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D JDM1_2595 conserved hypothetical protein K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D JDM1_2596 conserved hypothetical protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D JDM1_1753 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:lpj03070]
D JDM1_0553 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JDM1_0659 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JDM1_0870 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JDM1_1913 preprotein translocase, subunit (putative) K03210 yajC; preprotein translocase subunit YajC
D JDM1_2949 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM1_1300 integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM1_0609 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM1_1372 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D JDM1_1374 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lpj02020]
D JDM1_0614 hpk3; histidine protein kinase; sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JDM1_0613 rrp3; response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D JDM1_0604 pstF; phosphate ABC transporter, substrate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JDM1_0615 pstE; phosphate ABC transporter, substrate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JDM1_0056 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM1_0052 hpk1; histidine protein kinase; sensor protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D JDM1_0051 rrp1; response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D JDM1_0001 dnaA; chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JDM1_1687 dltA; D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D JDM1_1686 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D JDM1_1176 dltC2; D-alanine-poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JDM1_1685 dltC1; D-alanine-poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JDM1_1684 dltD; D-alanyl transfer protein DltD K03740 dltD; D-alanine transfer protein
D JDM1_0562 integral membrane protein (putative) K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D JDM1_0636 aad; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JDM1_0836 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JDM1_1295 hpk5; histidine protein kinase; sensor protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D JDM1_1294 rrp5; response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D JDM1_0912 citC; (citrate (pro-3S)-lyase) ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D JDM1_0913 citD; citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D JDM1_0914 citE; citrate lyase, beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D JDM1_0915 citF; citrate lyase, alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D JDM1_0919 citX; apo-citrate lyase phosphoribosyl-ft dephospho-CoA transferase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D JDM1_0903 citG; triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D JDM1_0911 mae; malic enzyme, NAD-dependent K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JDM1_2612 lrgA; effector of murein hydrolase (putative) K05338 lrgA; holin-like protein
D JDM1_2613 lrgB; effector of murein hydrolase (putative) K05339 lrgB; holin-like protein LrgB
D JDM1_2864 agrB; accesory gene regulator protein B K07813 agrB; accessory gene regulator B
D JDM1_1139 pltK; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2862 agrC; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_0349 plnB; histidine protein kinase PlnB; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2462 hpk10; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2441 hpk9; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_1140 pltR; response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_2861 agrA; response regulator; accesory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_2461 rrp10; response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_0350 plnD; response regulator PlnD, repressor K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_2138 rrp8; response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_1253 narG; nitrate reductase, alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D JDM1_1254 narH; nitrate reductase, beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D JDM1_1256 narI; nitrate reductase, gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D JDM1_1255 narJ; nitrate reductase, delta chain K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D JDM1_1639 hpk6; histidine protein kinase; sensor protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JDM1_1638 rrp6; response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D JDM1_1244 hpk4; histidine protein kinase; sensor protein (putative) K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D JDM1_1243 rrp4; response regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D JDM1_1245 conserved hypothetical protein K10851 nreA; nitrogen regulatory protein A
D JDM1_1325 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM1_0651 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JDM1_2908 hpk12; histidine protein kinase; sensor protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D JDM1_2907 rrp12; response regulator K07720 yesN; two-component system, response regulator YesN
D JDM1_0927 cydA; cytochrome D ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JDM1_0928 cydB; cytochrome D ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JDM1_1015 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lpj02024]
D JDM1_0641 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D JDM1_1386 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JDM1_1387 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JDM1_1388 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JDM1_1025 glycosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D JDM1_2723 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D JDM1_2391 livA; branched-chain amino acid ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM1_2390 livB; branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D JDM1_2389 livC; branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D JDM1_2388 livD; branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JDM1_2387 livE; branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JDM1_1198 Pyrimidine reductase, riboflavin biosynthesis K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JDM1_2161 integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JDM1_2864 agrB; accesory gene regulator protein B K07813 agrB; accessory gene regulator B
D JDM1_1139 pltK; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2862 agrC; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_0349 plnB; histidine protein kinase PlnB; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2462 hpk10; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2441 hpk9; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_1140 pltR; response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_2861 agrA; response regulator; accesory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_2461 rrp10; response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_0350 plnD; response regulator PlnD, repressor K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_2138 rrp8; response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_1067 oppA; oligopeptide ABC transporter, substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0185 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_2948 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0097 extracellular protein, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0186 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0017 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0648 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_1068 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D JDM1_1069 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D JDM1_1070 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JDM1_1071 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JDM1_0354 plnG; bacteriocin ABC-transporter, ATP-binding and permease protein PlnG K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D JDM1_0355 plnH; bacteriocin ABC transporter, accessory factor PlnH K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D JDM1_0383 hypothetical protein K20375 ropB; HTH-type transcriptional regulator, pheromone-responsive regulator
D JDM1_2949 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM1_1300 integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM1_0553 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JDM1_0659 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JDM1_0870 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JDM1_1913 preprotein translocase, subunit (putative) K03210 yajC; preprotein translocase subunit YajC
D JDM1_0609 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM1_1372 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D JDM1_1374 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:lpj02040]
D JDM1_2569 amino acid ABC transporter, substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JDM1_2572 amino acid ABC transporter, substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JDM1_1653 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JDM1_0651 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JDM1_1614 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM1_0656 enoA1; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lpj01501]
D JDM1_1067 oppA; oligopeptide ABC transporter, substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0185 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_2948 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0097 extracellular protein, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0186 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0017 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0648 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_1068 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D JDM1_1069 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D JDM1_1070 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JDM1_1071 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JDM1_0396 bla1; beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D JDM1_1958 bla2; beta-lactamase (putative) K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D JDM1_2010 ABC transporter, ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D JDM1_2375 lmrA; multidrug ABC transporter, ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D JDM1_1473 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JDM1_1182 pbp2A; penicillin binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:lpj01502]
D JDM1_0636 aad; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JDM1_1961 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDM1_0423 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JDM1_0420 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JDM1_1840 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JDM1_1838 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JDM1_0836 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lpj01503]
D JDM1_1672 lytH; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JDM1_0056 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM1_1687 dltA; D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D JDM1_1686 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D JDM1_1176 dltC2; D-alanine-poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JDM1_1685 dltC1; D-alanine-poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JDM1_1684 dltD; D-alanyl transfer protein DltD K03740 dltD; D-alanine transfer protein
D JDM1_0562 integral membrane protein (putative) K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lpj01000]
C 01001 Protein kinases [BR:lpj01001]
D JDM1_1359 pkn1; serine/threonine protein kinase (putative) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JDM1_1765 cps4B; exopolysaccharide biosynthesis protein; chain length determinator K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D JDM1_0614 hpk3; histidine protein kinase; sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JDM1_0052 hpk1; histidine protein kinase; sensor protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D JDM1_1295 hpk5; histidine protein kinase; sensor protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D JDM1_1639 hpk6; histidine protein kinase; sensor protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JDM1_1244 hpk4; histidine protein kinase; sensor protein (putative) K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D JDM1_1139 pltK; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2862 agrC; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_0349 plnB; histidine protein kinase PlnB; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2462 hpk10; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2441 hpk9; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2908 hpk12; histidine protein kinase; sensor protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lpj01009]
D JDM1_1596 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JDM1_1358 pppL; serine/threonine specific protein phosphatase (putative) K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:lpj01002]
D JDM1_1496 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JDM1_0540 pepC1; cysteine aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D JDM1_2938 pepC2; cysteine aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D JDM1_0761 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JDM1_0117 conserved hypothetical protein K07010 K07010; putative glutamine amidotransferase
D JDM1_0354 plnG; bacteriocin ABC-transporter, ATP-binding and permease protein PlnG K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D JDM1_1813 extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase (putative) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JDM1_2724 extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase (putative) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JDM1_2029 extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase (putative) K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D JDM1_2182 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JDM1_0684 glmS1; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JDM1_2460 asnB2; asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JDM1_0813 asnB1; asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JDM1_0076 bsh2; choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D JDM1_2068 bsh4; choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D JDM1_2695 bsh3; choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D JDM1_2822 bsh1; choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D JDM1_0416 srtA; sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JDM1_0795 pepD3; dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D JDM1_0297 pepD2; dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D JDM1_0213 pepD1; dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D JDM1_1440 pepD4; dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D JDM1_2864 agrB; accesory gene regulator protein B K07813 agrB; accessory gene regulator B
D JDM1_2333 CAAX family protease K07052 K07052; CAAX protease family protein
D JDM1_0356 plnT; integral membrane protein PlnT K07052 K07052; CAAX protease family protein
D JDM1_0357 plnU; integral membrane protein PlnU, membrane-bound protease CAAX family K07052 K07052; CAAX protease family protein
D JDM1_0358 plnV; integral membrane protein plnV K07052 K07052; CAAX protease family protein
D JDM1_0267 CAAX family protease K07052 K07052; CAAX protease family protein
D JDM1_0765 CAAX family protease K07052 K07052; CAAX protease family protein
D JDM1_0599 CAAX family protease K07052 K07052; CAAX protease family protein
D JDM1_0359 plnW; integral membrane protein PlnW K07052 K07052; CAAX protease family protein
D JDM1_0266 CAAX family protease K07052 K07052; CAAX protease family protein
D JDM1_0780 pepN; membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JDM1_1862 pepF1; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D JDM1_2745 pepO; endopeptidase PepO K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D JDM1_0836 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JDM1_0636 aad; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JDM1_1116 pepV; dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D JDM1_1617 dapE1; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JDM1_2292 dapE2; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JDM1_1600 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D JDM1_1896 amino acid amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D JDM1_0229 pepM; methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JDM1_1891 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D JDM1_1336 pepP; Xaa-Pro aminopeptidase (putative) K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D JDM1_0445 ftsH; cell division protein FtsH, ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JDM1_0418 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D JDM1_1711 zinc-dependent protease, membrane associated (putative) K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D JDM1_0056 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM1_1081 dacA2; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM1_2551 dacA1; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM1_0650 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JDM1_0503 Clp protease domain protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JDM1_0714 pepX; x-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D JDM1_1788 lon; endopeptidase La (putative) K07177 K07177; Lon-like protease
D JDM1_1725 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D JDM1_2939 sip3; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JDM1_2298 sip1; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JDM1_2299 sip2; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JDM1_2340 pepR2; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JDM1_0093 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JDM1_0711 pepR1; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JDM1_0094 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JDM1_1566 ctpA; carboxy-terminal processing proteinase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D JDM1_1319 conserved hypothetical protein K05995 pepE; dipeptidase E [EC:3.4.13.21]
D JDM1_1316 integral membrane protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D JDM1_1487 bacteriocin immunity protein (putative) K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D JDM1_0987 protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D JDM1_0046 prophage Lp3 protein 18 K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D JDM1_1552 hslV; ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
C 01003 Glycosyltransferases [BR:lpj01003]
D JDM1_1078 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D JDM1_1537 glycosyltransferase (putative) K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D JDM1_1079 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D JDM1_0021 glgA; starch (glycogen) synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JDM1_1473 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JDM1_1182 pbp2A; penicillin binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D JDM1_0461 tagA; teichoic acid biosynthesis protein A K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D JDM1_1099 tagE1; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_1106 tagE2; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_1107 tagE3; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_2011 tagE4; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_2280 tagE5; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_2282 tagE6; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JDM1_0603 tagO; undecaprenyl-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JDM1_2176 ica3; glycosyltransferase (putative) K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D JDM1_1795 ica2; glycosyltransferase (putative) K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D JDM1_1278 ica1; glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lpj01005]
D JDM1_1025 glycosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D JDM1_1195 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D JDM1_0603 tagO; undecaprenyl-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JDM1_1730 glycosyltransferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lpj01011]
D JDM1_1974 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDM1_0412 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDM1_0677 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JDM1_1222 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JDM1_1839 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JDM1_0811 murE1; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diami nopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JDM1_1961 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDM1_0423 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JDM1_1901 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JDM1_1487 bacteriocin immunity protein (putative) K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D JDM1_1840 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JDM1_1838 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JDM1_2715 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDM1_1111 phosphatase (putative) K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDM1_1473 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JDM1_1182 pbp2A; penicillin binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D JDM1_1841 pbp2B2; penicillin binding protein 2B K08724 pbpB; penicillin-binding protein 2B
D JDM1_1314 pbp2B1; penicillin binding protein 2B K21465 pbpA; penicillin-binding protein A
D JDM1_1081 dacA2; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM1_2551 dacA1; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM1_0636 aad; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JDM1_0836 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JDM1_1813 extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase (putative) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JDM1_2724 extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase (putative) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JDM1_0416 srtA; sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JDM1_1307 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D JDM1_1672 lytH; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:lpj01004]
D JDM1_1406 fabD; (acyl-carrier protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JDM1_1404 fabH2; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JDM1_0530 fabH1; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JDM1_1408 fabF; 3-oxoacyl-(acyl-carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JDM1_1407 fabG1; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_2218 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_0149 short-chain dehydrogenase/oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM1_1403 fabZ1; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JDM1_1410 fabZ2; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JDM1_1414 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JDM1_0759 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D JDM1_1368 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JDM1_1549 integral membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JDM1_1722 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:lpj01008]
D JDM1_1277 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:lpj01006]
D JDM1_1343 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JDM1_1713 uppS; di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JDM1_2617 crtM; phytoene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
D JDM1_1323 miaA; tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JDM1_1443 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D JDM1_0933 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D JDM1_1296 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:lpj01007]
D JDM1_0546 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JDM1_2254 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDM1_0364 trpS; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JDM1_0547 cysS; cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JDM1_1164 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDM1_0380 metS; methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JDM1_1830 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JDM1_1942 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JDM1_1112 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDM1_0448 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JDM1_1670 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDM1_0793 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JDM1_1462 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JDM1_1671 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JDM1_1656 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JDM1_1655 glyS; glycine-tRNA ligase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JDM1_0406 serS1; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDM1_0838 serS2; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDM1_1710 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JDM1_1268 thrS; threonine-tRNA ligase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JDM1_1909 alaS; alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JDM1_1305 pheS; phenylalanine-tRNA ligase, alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JDM1_1306 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JDM1_0306 transaminase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D JDM1_2152 araT2; aromatic amino acid specific aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D JDM1_1082 araT1; aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D JDM1_0727 bifunctional protein: amino acid aminotransferase; 2-hydroxyacid dehydrogenase K00841 patA; aminotransferase [EC:2.6.1.-]
D JDM1_2052 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM1_2207 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM1_2806 metC2; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM1_2316 patB; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM1_0431 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JDM1_1995 bcaT; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDM1_0586 phnW; (2-aminoethyl)phosphonate--pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D JDM1_0189 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lpj00194]
D JDM1_1975 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JDM1_1976 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JDM1_1977 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JDM1_1978 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JDM1_1979 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JDM1_1980 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JDM1_1981 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JDM1_1982 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lpj03000]
D JDM1_2787 transcription regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D JDM1_2793 transcription regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D JDM1_2279 transcription regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D JDM1_0067 transcription regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D JDM1_2835 transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D JDM1_1752 fruR; transcription regulator of fructose operon K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D JDM1_1620 transcription regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D JDM1_2895 transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JDM1_1890 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JDM1_2763 lacR; transcription regulator of beta-galactosidase gene K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JDM1_2771 galR1; galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JDM1_2780 galR2; galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JDM1_2929 ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JDM1_2819 transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JDM1_0177 sacR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D JDM1_2843 araR; arabinose operon repressor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D JDM1_0234 treR; transcription regulator K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D JDM1_2503 transcription regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D JDM1_0144 transcription regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D JDM1_0460 transcription regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D JDM1_2126 transcription regulator K03710 K03710; GntR family transcriptional regulator
D JDM1_2151 aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D JDM1_1651 transcription regulator K07979 ytrA; GntR family transcriptional regulator
D JDM1_0289 transcription regulator K07979 ytrA; GntR family transcriptional regulator
D JDM1_2495 transcription regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D JDM1_2754 transcription regulator (putative) K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D JDM1_2030 transcription regulator, AsnC-type K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JDM1_2681 transcription regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D JDM1_0740 transcription regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D JDM1_1145 transcription regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D JDM1_1534 transcription regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D JDM1_1606 transcription regulator (putative) K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D JDM1_1324 glnR; glutamine synthetase repressor K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D JDM1_2147 transcription regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D JDM1_2490 transcription regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D JDM1_0248 transcription regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D JDM1_0723 metal uptake regulator K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D JDM1_2607 fur; ferric uptake regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D JDM1_1204 transcription regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D JDM1_2744 transcription regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D JDM1_0091 transcription regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D JDM1_2400 transcription regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D JDM1_1953 transcription regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D JDM1_2932 padR; regulator of phenolic acid metabolism PadR K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D JDM1_2574 transcription regulator (putative) K10947 K10947; PadR family transcriptional regulator
D JDM1_2455 transcription regulator (putative) K10947 K10947; PadR family transcriptional regulator
D JDM1_0825 metal-dependent regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D JDM1_2844 transcription regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D JDM1_0712 birA2; biotin-(acetyl-CoA-carboxylase)ligase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JDM1_0301 birA1; biotin-(acetyl-CoA-carboxylase)ligase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JDM1_0383 hypothetical protein K20375 ropB; HTH-type transcriptional regulator, pheromone-responsive regulator
D JDM1_0394 purR; purine operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D JDM1_0597 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D JDM1_2770 transcription regulator K07726 K07726; putative transcriptional regulator
D JDM1_1260 transcription regulator (putative) K07727 K07727; putative transcriptional regulator
D JDM1_0208 transcription regulator K07729 K07729; putative transcriptional regulator
D JDM1_2804 bglG4; transcription antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D JDM1_0754 bglG2; transcription antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D JDM1_2817 bglG5; transcription antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D JDM1_0215 mtlR; transcription regulator, mannitol operon K03483 mtlR; mannitol operon transcriptional activator
D JDM1_0574 conserved hypothetical protein K03483 mtlR; mannitol operon transcriptional activator
D JDM1_2740 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D JDM1_2170 pucR; purine transport regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D JDM1_2560 parB1; chromosome partitioning protein, DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JDM1_2562 parB2; chromosome partitioning protein, DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JDM1_1180 argR1; arginine catabolic regulator K03402 argR; transcriptional regulator of arginine metabolism
D JDM1_1345 argR2; arginine catabolic regulator K03402 argR; transcriptional regulator of arginine metabolism
D JDM1_1693 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D JDM1_0839 ctsR; transcription regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D JDM1_0621 stress-responsive transcription regulator (putative) K03973 pspC; phage shock protein C
D JDM1_0652 cggR; central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator
D JDM1_2169 pyrR1; pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JDM1_1498 pyrR2; pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JDM1_1265 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D JDM1_1844 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lpj03021]
D JDM1_0273 DNA helicase (putative) K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D JDM1_0876 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JDM1_0842 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JDM1_0843 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JDM1_0404 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D JDM1_1353 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JDM1_1653 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JDM1_0551 sigH; DNA-directed RNA polymerase, sigma factor 30 K27000 sigH; RNA polymerase sigma-H factor
D JDM1_0651 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JDM1_1707 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D JDM1_1339 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D JDM1_0554 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JDM1_1309 greA2; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D JDM1_0206 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D JDM1_0413 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:lpj03019]
D JDM1_1370 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JDM1_1809 metallo-beta-lactamase superfamily protein (putative) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JDM1_1778 metallo-beta-lactamase superfamily protein (putative) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JDM1_1924 phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JDM1_0661 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JDM1_1186 conserved hypothetical protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D JDM1_0421 rhe1; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JDM1_1910 rhe3; ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D JDM1_0798 recQ1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JDM1_1585 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JDM1_1614 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM1_0656 enoA1; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM1_0413 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JDM1_1596 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JDM1_1691 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JDM1_0601 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM1_0701 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D JDM1_0645 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:lpj03011]
D JDM1_1582 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JDM1_1717 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JDM1_0856 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JDM1_1949 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JDM1_0867 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JDM1_0007 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JDM1_0846 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JDM1_0864 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JDM1_0889 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JDM1_0849 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JDM1_0875 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JDM1_0845 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JDM1_0874 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JDM1_0863 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JDM1_1853 rpsN2; ribosomal protein S14-2 K02954 RP-S14; small subunit ribosomal protein S14
D JDM1_1781 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JDM1_1375 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JDM1_0859 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JDM1_0009 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JDM1_0854 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JDM1_1782 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JDM1_1663 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JDM1_0557 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JDM1_0853 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JDM1_0850 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JDM1_0851 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JDM1_0862 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JDM1_0865 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JDM1_0011 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JDM1_0558 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JDM1_0556 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JDM1_0559 rplL; ribosomal protein L12/L7 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JDM1_0888 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JDM1_0860 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JDM1_0869 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JDM1_0857 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JDM1_0877 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JDM1_0866 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JDM1_1379 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JDM1_1271 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JDM1_1333 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JDM1_0855 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JDM1_0852 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JDM1_0861 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JDM1_1335 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JDM1_1364 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JDM1_0858 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JDM1_0868 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JDM1_0414 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JDM1_1289 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JDM1_0552 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JDM1_1270 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JDM1_0873 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JDM1_rRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA09 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:lpj03009]
D JDM1_1370 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JDM1_1658 era; GTP-binding protein Era K03595 era; GTPase
D JDM1_1751 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D JDM1_1707 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D JDM1_1339 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D JDM1_0554 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JDM1_1114 rsuA; pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D JDM1_0387 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JDM1_1357 sunL; rRNA methylase (putative) K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D JDM1_0568 rsmc; 16S RNA methylase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D JDM1_1790 N6-adenine-specific methylase (putative) K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D JDM1_1678 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D JDM1_2563 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JDM1_1843 mraW; cell division protein MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JDM1_0583 methyltransferase (putative) K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JDM1_1344 hemolysin-like protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D JDM1_1851 rrmA; rRNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D JDM1_0549 trmH; tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D JDM1_0057 SPOUT methyltransferase superfamily protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D JDM1_2016 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D JDM1_0946 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D JDM1_1588 rluB; pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D JDM1_2128 rluA; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JDM1_1858 rluD2; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JDM1_0799 rluE; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JDM1_1497 rluD1; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JDM1_0593 rimI1; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D JDM1_0594 rimI2; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D JDM1_2277 ribosomal protein acetylating enzyme K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D JDM1_1973 ribosomal protein acetylating enzyme K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D JDM1_1377 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D JDM1_1679 ribosomal protein L11 methyltransferase (putative) K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D JDM1_1907 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D JDM1_0548 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D JDM1_0421 rhe1; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JDM1_1910 rhe3; ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D JDM1_1420 GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JDM1_1361 translation factor, GTPase (putative) K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JDM1_1581 engA; GTP-binding protein EngA K03977 engA; GTPase
D JDM1_1558 GTPase K14540 rbgA; ribosome biogenesis GTPase A
D JDM1_0746 GTPase K03665 hflX; GTPase
D JDM1_1281 GTP-binding protein YqeH K06948 yqeH; 30S ribosome assembly GTPase
D JDM1_1986 SUA5 family translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JDM1_1676 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JDM1_1703 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D JDM1_1708 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D JDM1_0003 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D JDM1_1285 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D JDM1_1660 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D JDM1_1282 conserved hypothetical protein K07574 yhbY; RNA-binding protein
D JDM1_0608 ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D JDM1_2558 translation-associated GTPase K06942 ychF; ribosome-binding ATPase
D JDM1_1288 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lpj03016]
D JDM1_1749 beta-lactamase superfamily hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D JDM1_1575 papL; tRNA CCA-pyrophosphorylase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D JDM1_1710 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JDM1_1830 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JDM1_1112 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDM1_0380 metS; methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JDM1_1164 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDM1_0448 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JDM1_1670 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDM1_1909 alaS; alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JDM1_0793 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JDM1_1462 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JDM1_1268 thrS; threonine-tRNA ligase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JDM1_0406 serS1; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDM1_0838 serS2; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDM1_0547 cysS; cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JDM1_1942 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JDM1_1671 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JDM1_1305 pheS; phenylalanine-tRNA ligase, alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JDM1_1306 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JDM1_2254 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDM1_0364 trpS; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JDM1_1675 D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D JDM1_1214 cell-cycle regulation histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JDM1_1218 methyl transferase (putative) K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D JDM1_0887 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JDM1_1696 truB; pseudouridylate synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JDM1_1946 csd3; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM1_1825 csd2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM1_1986 SUA5 family translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JDM1_1323 miaA; tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JDM1_2945 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D JDM1_2944 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JDM1_2950 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JDM1_1656 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JDM1_1655 glyS; glycine-tRNA ligase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JDM1_0546 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JDM1_2135 transcription regulator (putative) K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D JDM1_0569 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D JDM1_0447 transcription regulator K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D JDM1_1554 gidC; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D JDM1_1378 trmD; tRNA (guanine-N1-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JDM1_1602 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D JDM1_1848 cspR; rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D JDM1_1302 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D JDM1_1823 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JDM1_1915 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D JDM1_0062 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D JDM1_1914 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D JDM1_1945 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JDM1_0443 mesJ; cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JDM1_0592 gpp; glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JDM1_0595 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JDM1_0672 ATPase or kinase (putative) K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D JDM1_1287 conserved hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D JDM1_0661 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:lpj03012]
D JDM1_1704 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JDM1_1269 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JDM1_0596 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D JDM1_1716 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D JDM1_1776 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JDM1_0847 fusA2; elongation factor G K02355 fusA; elongation factor G
D JDM1_1988 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D JDM1_1714 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D JDM1_1987 hemK; protoporphyrinogen oxidase (putative) K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JDM1_0437 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JDM1_0872 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D JDM1_1337 efp; elongation factor P K02356 efp; elongation factor P
D JDM1_0611 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D JDM1_1061 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:lpj03110]
D JDM1_1599 clpB; ATP-dependent Clp protease, ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D JDM1_0840 clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JDM1_1074 clpE; ATP-dependent Clp protease, ATP-binding subunit ClpE K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D JDM1_2865 clpL; ATP-dependent Clp protease, ATP-binding subunit ClpL K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D JDM1_1774 clpX; ATP-dependent protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JDM1_1551 hslU; ATP-dependent protease ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D JDM1_1691 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JDM1_0601 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM1_1690 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JDM1_0446 hsp33; heat shock protein HSP33 K04083 hslO; molecular chaperone Hsp33
D JDM1_1692 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D JDM1_2688 hsp3; small heat shock protein K13993 HSP20; HSP20 family protein
D JDM1_0127 hsp1; small heat shock protein K13993 HSP20; HSP20 family protein
D JDM1_2141 hsp2; small heat shock protein K13993 HSP20; HSP20 family protein
D JDM1_0600 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D JDM1_0056 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM1_0445 ftsH; cell division protein FtsH, ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JDM1_1982 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JDM1_2914 conserved hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D JDM1_1870 ppiB; peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D JDM1_1212 prsA; peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D JDM1_2739 trxA3; thioredoxin K03671 TXN; thioredoxin
D JDM1_0219 trxA1; thioredoxin K03671 TXN; thioredoxin
D JDM1_1903 trxA2; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:lpj04131]
D JDM1_0223 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JDM1_2901 alpha-mannosidase (putative) K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D JDM1_0653 gapB; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JDM1_0538 pgm2; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM1_2535 pmg9; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM1_1595 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JDM1_2342 integral membrane protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:lpj04121]
C 03051 Proteasome [BR:lpj03051]
C 03032 DNA replication proteins [BR:lpj03032]
D JDM1_2082 rnh; ribonuclease H (putative) K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JDM1_1492 esbB; cell wall enzyme K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JDM1_0328 conserved hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JDM1_1579 hbsU; DNA-binding protein II K03530 hupB; DNA-binding protein HU-beta
D JDM1_0001 dnaA; chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JDM1_0013 dnaC; replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JDM1_0979 DNA replication protein K02315 dnaC; DNA replication protein DnaC
D JDM1_1654 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D JDM1_1266 dnaB; replication initiation and membrane attachment protein DnaB K03346 dnaB; replication initiation and membrane attachment protein
D JDM1_1267 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D JDM1_0008 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_0975 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_1597 dnaE; DNA-directed DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDM1_1709 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JDM1_0002 dnaN; DNA-directed DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDM1_1783 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDM1_0581 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDM1_0674 DNA-directed DNA polymerase III, epsilon chain (putative) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM1_0570 dnaX; DNA-directed DNA polymerase III, gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDM1_1557 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JDM1_1262 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM1_0940 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JDM1_0006 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JDM1_0005 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JDM1_1547 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JDM1_1548 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JDM1_1555 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lpj03036]
D JDM1_1370 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JDM1_1579 hbsU; DNA-binding protein II K03530 hupB; DNA-binding protein HU-beta
D JDM1_0001 dnaA; chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JDM1_2502 stress induced DNA binding protein K04047 dps; starvation-inducible DNA-binding protein
D JDM1_2030 transcription regulator, AsnC-type K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JDM1_1371 smc; cell division protein Smc K03529 smc; chromosome segregation protein
D JDM1_1590 conserved hypothetical protein K05896 scpA; segregation and condensation protein A
D JDM1_1589 transcription regulator (putative) K06024 scpB; segregation and condensation protein B
D JDM1_1836 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JDM1_0441 conserved hypothetical protein K13052 divIC; cell division protein DivIC
D JDM1_1221 ftsK1; cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JDM1_1847 ftsK2; cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JDM1_1842 ftsL; cell division protein FtsL (putative) K03586 ftsL; cell division protein FtsL
D JDM1_1837 ftsQ; cell division initiation protein FtsQ K03589 ftsQ; cell division protein FtsQ
D JDM1_1793 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D JDM1_1835 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDM1_1905 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D JDM1_1672 lytH; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JDM1_1947 ezrA; septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D JDM1_1936 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D JDM1_1935 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D JDM1_1831 divIVA; cell division initiation protein DivIVA K04074 divIVA; cell division initiation protein
D JDM1_1834 cell division protein (putative) K09772 sepF; cell division inhibitor SepF
D JDM1_1939 mreB1; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JDM1_1972 mreB2; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JDM1_1938 mreC; cell shape determining protein MreC K03570 mreC; rod shape-determining protein MreC
D JDM1_1937 mreD; cell shape determining protein MreD K03571 mreD; rod shape-determining protein MreD
D JDM1_1969 rodA2; rod-shape determining protein K05837 rodA; rod shape determining protein RodA
D JDM1_2561 parA; chromosome partitioning protein, membrane-associated ATPase K03496 parA; chromosome partitioning protein
D JDM1_2560 parB1; chromosome partitioning protein, DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JDM1_2562 parB2; chromosome partitioning protein, DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JDM1_1547 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JDM1_1548 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JDM1_2944 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JDM1_2563 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JDM1_1554 gidC; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D JDM1_1553 codV; integrase/recombinase K03733 xerC; integrase/recombinase XerC
D JDM1_1592 integrase/recombinase K04763 xerD; integrase/recombinase XerD
D JDM1_2769 fic; cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D JDM1_1773 GTPase EngB K03978 engB; GTP-binding protein
D JDM1_0647 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:lpj03400]
D JDM1_0670 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JDM1_1680 N-methylpurine-DNA glycosylase (putative) K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D JDM1_2685 mutY; A/G-specific adenine glycosylase (putative) K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JDM1_2296 nth1; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JDM1_0273 DNA helicase (putative) K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D JDM1_2026 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JDM1_0720 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JDM1_0543 dut; trimetaphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JDM1_2285 ogt; methylated-DNA-(protein)-cysteine S-methyltransferase K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JDM1_2420 tag2; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JDM1_0262 tag1; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JDM1_2645 tag3; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JDM1_1263 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JDM1_0675 exoA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JDM1_1666 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JDM1_1746 recJ; single-strand DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JDM1_0940 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JDM1_1262 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM1_2337 uvrA3; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D JDM1_0640 uvrA1; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D JDM1_0639 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D JDM1_1767 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D JDM1_0758 DNA helicase (putative) K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM1_0939 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM1_0842 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JDM1_0843 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JDM1_0876 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JDM1_0404 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D JDM1_1353 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JDM1_0438 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JDM1_1922 hexA; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D JDM1_1904 mutS; DNA mismatch repair protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D JDM1_1921 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D JDM1_1341 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JDM1_1342 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JDM1_1597 dnaE; DNA-directed DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDM1_1709 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JDM1_0002 dnaN; DNA-directed DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDM1_1783 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDM1_0581 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDM1_0674 DNA-directed DNA polymerase III, epsilon chain (putative) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM1_0570 dnaX; DNA-directed DNA polymerase III, gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDM1_0008 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_0975 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_1815 recD; exodeoxyribonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D JDM1_1925 recA; recombinase A K03553 recA; recombination protein RecA
D JDM1_1917 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JDM1_1916 ruvB; Holliday junction DNA helicase B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JDM1_1355 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JDM1_1297 sbcC; exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D JDM1_1298 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D JDM1_1184 phosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11
D JDM1_0544 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D JDM1_0004 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D JDM1_1367 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JDM1_1657 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JDM1_0572 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JDM1_1346 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D JDM1_1474 recU; Holliday junction-specific endonuclease K03700 recU; recombination protein U
D JDM1_2159 rexA; ATP-dependent nuclease, subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D JDM1_2160 rexB; ATP-dependent nuclease, subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D JDM1_0006 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JDM1_0005 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JDM1_1555 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JDM1_1579 hbsU; DNA-binding protein II K03530 hupB; DNA-binding protein HU-beta
D JDM1_0798 recQ1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JDM1_1585 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JDM1_1912 dinP; DNA-damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JDM1_2423 umuC; UV-damage repair protein K03502 umuC; DNA polymerase V
D JDM1_1725 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D JDM1_1048 recX; recombination regulator RecX K03565 recX; regulatory protein
D JDM1_1459 dinG; ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D JDM1_0566 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JDM1_0565 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDM1_1158 exopolyphosphatase-related protein (putative) K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D JDM1_1911 exopolyphosphatase-related protein (putative) K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:lpj03029]
D JDM1_1704 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JDM1_1269 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JDM1_1716 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D JDM1_1776 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JDM1_0847 fusA2; elongation factor G K02355 fusA; elongation factor G
D JDM1_1658 era; GTP-binding protein Era K03595 era; GTPase
D JDM1_2254 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDM1_1112 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDM1_1670 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDM1_1164 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDM1_0943 gatA; glutamyl-tRNA amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JDM1_0944 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JDM1_0942 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JDM1_0008 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_0975 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D JDM1_1691 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JDM1_1692 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D JDM1_0601 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM1_0600 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D JDM1_1690 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JDM1_1946 csd3; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM1_1825 csd2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM1_2949 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM1_1300 integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lpj02000]
D JDM1_2321 ABC transporter, ATP-binding and permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_2916 ABC transporter, ATP-binding and permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_2917 ABC transporter, ATP-binding and permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_2010 ABC transporter, ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D JDM1_2375 lmrA; multidrug ABC transporter, ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D JDM1_2426 ABC transporter, ATP-binding and permease protein K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_2425 ABC transporter, ATP-binding protein K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_1999 ABC transporter, ATP-binding and permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_1998 ABC transporter, ATP-binding and permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM1_0354 plnG; bacteriocin ABC-transporter, ATP-binding and permease protein PlnG K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D JDM1_0930 cydD; cytochrome D ABC transporter, ATP-binding and permease protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D JDM1_0929 cydC; cytochrome D ABC transporter, ATP-binding and permease protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D JDM1_0200 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D JDM1_1573 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D JDM1_1471 ABC transporter, substrate binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JDM1_1470 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D JDM1_1472 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JDM1_0280 potD; spermidine/putrescine ABC transporter, substrate binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JDM1_0281 potC; spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D JDM1_0282 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D JDM1_0283 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JDM1_0329 choS; glycine betaine/carnitine/choline ABC transporter, substrate binding and permease protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D JDM1_1349 opuC; glycine betaine/carnitine/choline ABC transporter, substrate binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D JDM1_1348 opuB; glycine betaine/carnitine/choline ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D JDM1_1350 opuD; glycine betaine/carnitine/choline ABC transporter, ATP-binding protein K05846 opuBD; osmoprotectant transport system permease protein
D JDM1_1347 opuA; glycine betaine/carnitine/choline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JDM1_0330 choQ; glycine betaine/carnitine/choline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JDM1_2905 msmK2; multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JDM1_0169 msmK1; multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JDM1_0164 malE; maltose/maltodextrin ABC transporter, substrate binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D JDM1_0165 malF; maltose/maltodextrin ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JDM1_0166 malG; maltose/maltodextrin ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JDM1_2911 sugar ABC transporter, substrate binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D JDM1_2913 sugar ABC transporter, permease protein K17319 lplB; putative aldouronate transport system permease protein
D JDM1_2912 sugar ABC transporter, permease protein K17320 lplC; putative aldouronate transport system permease protein
D JDM1_1122 sugar ABC transporter, substrate binding protein (putative) K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D JDM1_1120 sugar ABC transporter, permease protein (putative) K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D JDM1_1121 sugar ABC transporter, permease protein (putative) K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D JDM1_1119 sugar ABC transporter, ATP-binding protein (putative) K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D JDM1_2581 transport protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D JDM1_2582 ABC transporter, ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D JDM1_0604 pstF; phosphate ABC transporter, substrate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JDM1_0615 pstE; phosphate ABC transporter, substrate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JDM1_0616 pstD; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D JDM1_0617 pstC; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D JDM1_0618 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JDM1_0619 pstA; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JDM1_0591 phnD; phosphonates ABC transporter, substrate binding protein (putative) K02044 phnD; phosphonate transport system substrate-binding protein
D JDM1_0588 phnE1; phosphonates ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D JDM1_0589 phnE2; phosphonates ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D JDM1_0590 phnC; phosphonates ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D JDM1_0666 glnPH1; glutamine ABC transporter, substrate binding and permease protein K10036 glnH; glutamine transport system substrate-binding protein
D JDM1_0667 glnQ1; glutamine ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D JDM1_0732 glnH1; glutamine ABC transporter, substrate binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D JDM1_0733 glnM; glutamine ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D JDM1_0734 glnP; glutamine ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D JDM1_0731 glnQ2; glutamine ABC transporter, ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D JDM1_2569 amino acid ABC transporter, substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JDM1_2572 amino acid ABC transporter, substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JDM1_2570 amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D JDM1_2571 amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D JDM1_1769 glnPH2; glutamine ABC transporter, substrate binding and permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D JDM1_1768 glnQ3; glutamine ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D JDM1_2391 livA; branched-chain amino acid ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM1_2390 livB; branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D JDM1_2389 livC; branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D JDM1_2388 livD; branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JDM1_2387 livE; branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JDM1_1965 amino acid ABC transporter, substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JDM1_1468 amino acid ABC transporter, substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JDM1_0302 amino acid ABC transporter, substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JDM1_1966 amino acid ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D JDM1_1467 amino acid ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D JDM1_0304 conserved hypothetical protein K02072 metI; D-methionine transport system permease protein
D JDM1_1967 amino acid ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JDM1_1466 amino acid ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JDM1_0303 amino acid ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JDM1_2045 ABC transporter, substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D JDM1_2381 ABC transporter, substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D JDM1_2046 ABC transporter, permease protein (putative) K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D JDM1_2380 ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D JDM1_2047 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D JDM1_2379 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D JDM1_1932 glnH2; glutamine ABC transporter, substrate binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JDM1_1934 glnP2; glutamine ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D JDM1_1933 glnQ4; glutamine ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JDM1_1067 oppA; oligopeptide ABC transporter, substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0185 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_2948 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0097 extracellular protein, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0186 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0017 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_0648 lipoprotein precursor, peptide binding protein OppA-like protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JDM1_1068 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D JDM1_1069 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D JDM1_1070 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JDM1_1071 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JDM1_2480 ferrichrome ABC transporter, substrate binding lipo protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D JDM1_2482 fhuB; ferrichrome ABC transporter, permease protein K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D JDM1_2483 fhuG; ferrichrome ABC transporter, permease protein K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D JDM1_2481 fhuC; ferrichrome ABC transporter, ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D JDM1_1230 fecB; iron chelatin ABC transporter, substrate binding protein (putative) K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JDM1_1232 fecD; iron chelatin ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D JDM1_1231 fecE; iron chelatin ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JDM1_0906 mtsA; manganese ABC transporter, substrate binding protein K19975 mntC; manganese transport system substrate-binding protein
D JDM1_0905 mtsB; manganese ABC transporter, permease protein K19976 mntB; manganese transport system permease protein
D JDM1_0904 mtsC; manganese ABC transporter, ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D JDM1_0102 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D JDM1_0103 hypothetical protein K02007 cbiM; cobalt/nickel transport system permease protein
D JDM1_0101 cobalt ABC transporter, ATP-binding protein (putative) K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D JDM1_0299 integral membrane protein K03523 bioY; biotin transport system substrate-specific component
D JDM1_2266 integral membrane protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D JDM1_0142 conserved hypothetical protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D JDM1_0140 ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D JDM1_0886 ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D JDM1_0201 ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D JDM1_0884 cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JDM1_0885 cobalt transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JDM1_0141 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JDM1_0202 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JDM1_0203 ABC transporter subunit (putative) K16925 ykoE; energy-coupling factor transport system permease protein
D JDM1_2654 ABC transporter substrate binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D JDM1_2417 ABC transporter substrate binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D JDM1_0393 zinc/iron ABC transporter, permease protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D JDM1_0392 zinc/iron ABC transporter, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D JDM1_0308 tagG; teichoic acid ABC transporter, permease protein K09692 tagG; teichoic acid transport system permease protein
D JDM1_0309 tagH; teichoic acid ABC transporter, ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D JDM1_1604 drrB; ABC transporter, permease protein K25140 drrB; daunorubicin/doxorubicin transport system permease protein
D JDM1_1605 drrA; ABC transporter, ATP-binding protein K25141 drrA; daunorubicin/doxorubicin transport system ATP-binding protein
D JDM1_0151 ABC transporter, permease protein K25149 narB; polyether ionophore transport system permease protein
D JDM1_0150 ABC transporter, ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D JDM1_0291 conserved hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D JDM1_0290 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D JDM1_1650 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D JDM1_1216 ecsB; ABC transporter, permease protein K25157 ecsB; ABC-2 type transport system permease protein
D JDM1_1215 ecsA; ABC transporter, ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D JDM1_2287 ABC transporter, permease protein (putative) K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDM1_1128 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDM1_1384 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDM1_1488 transport protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDM1_1510 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDM1_1640 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDM1_1647 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDM1_2226 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDM1_2100 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM1_2200 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM1_1130 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM1_1383 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM1_1489 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM1_2227 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM1_2286 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM1_1129 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM1_1509 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM1_1641 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM1_1646 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM1_2197 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JDM1_2264 ABC transporter, permease protein (putative) K02004 ABC.CD.P; putative ABC transport system permease protein
D JDM1_2293 ABC transporter, permease protein (putative) K02004 ABC.CD.P; putative ABC transport system permease protein
D JDM1_0264 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JDM1_2402 ABC transporter, ATP-binding and permease protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JDM1_2196 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JDM1_2265 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JDM1_2294 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JDM1_0265 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JDM1_1225 ABC transporter, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D JDM1_1161 cation efflux protein (putative) K26937 dinF; MATE family, multidrug efflux pump
D JDM1_0092 cation efflux protein (putative) K26937 dinF; MATE family, multidrug efflux pump
D JDM1_2765 sugar transport protein K06610 iolF; MFS transporter, SP family, inositol transporter
D JDM1_2767 sugar transport protein K06610 iolF; MFS transporter, SP family, inositol transporter
D JDM1_2877 sugar transport protein K06610 iolF; MFS transporter, SP family, inositol transporter
D JDM1_1702 transport protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D JDM1_2788 transport protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D JDM1_2794 transport protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D JDM1_0132 transport protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D JDM1_1237 narK; nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JDM1_0637 multidrug transport protein K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D JDM1_0130 transport protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D JDM1_1780 multidrug transport protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D JDM1_2704 transport protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D JDM1_2458 transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D JDM1_2699 multidrug transport protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D JDM1_1615 transport protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D JDM1_2342 integral membrane protein K06902 UMF1; MFS transporter, UMF1 family
D JDM1_2025 transport protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D JDM1_1077 ptsI; phosphoenolpyruvate-protein phosphatase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D JDM1_1076 hpr; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D JDM1_2809 pts32A; glucose PTS, EIIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2885 Phosphotransferase system IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2408 pts23A; cellobiose PTS, EIIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_0735 pts11A; PTS, EIIA (putative) K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JDM1_2038 pts18CBA; N-acetylglucosamine and glucose PTS, EIICBA K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D JDM1_2378 pts22CBA; N-acetylglucosamine PTS, EIICBA K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D JDM1_2577 pts24BCA; sucrose PTS, EIIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D JDM1_2811 pts32BC; sucrose PTS, EIIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D JDM1_0175 pts1BCA; sucrose PTS, EIIBCA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D JDM1_0237 pts5ABC; beta-glucosides PTS, EIIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_2600 pts28ABC; beta-glucosides PTS, EIIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_0236 pts4ABC; beta-glucosides PTS, EIIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_2816 pts33BCA; beta-glucosides PTS, EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_2586 pts27BCA; beta-glucosides PTS, EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_0755 pts12BCA; beta-glucosides PTS, EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_2803 pts30BCA; beta-glucosides PTS, EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_0737 pts11BC; beta-glucosides PTS, EIIBC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JDM1_2889 pts18CBA; N-acetylglucosamine and glucose PTS, EIICBA K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D JDM1_2893 pts18CBA; N-acetylglucosamine and glucose PTS, EIICBA K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D JDM1_2596 conserved hypothetical protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D JDM1_2594 phosphotransferase system fructose-specific component IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D JDM1_1754 pts16ABC; fructose PTS, EIIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D JDM1_0529 pts10B; mannose PTS, EIIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D JDM1_2595 conserved hypothetical protein K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D JDM1_2808 pts31A; putative fructose-like phosphotransferase system subunit EIIA K11201 frvA; fructose-like PTS system EIIA component [EC:2.7.1.-]
D JDM1_2807 pts31BC; putative PTS transporter components IIBC K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D JDM1_0216 pts2A; mannitol PTS, EIIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D JDM1_0214 pts2CB; mannitol PTS, EIICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D JDM1_1170 pts15A; beta-glucosides PTS, EIIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JDM1_0778 conserved hypothetical protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JDM1_2231 pts20A; cellobiose PTS, EIIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JDM1_1171 pts15B; beta-glucosides PTS, EIIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JDM1_2232 pts20B; cellobiose PTS, EIIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JDM1_2409 pts23B; cellobiose PTS, EIIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JDM1_1172 pts15C; beta-glucosides PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_1006 pts14C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_2798 pts29C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0366 pts7C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0369 pts8C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_2505 pts23C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_2410 pts23C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0253 pts6C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_0949 pts13C; cellobiose PTS, EIIC K02761 celB; cellobiose PTS system EIIC component
D JDM1_2920 pts38A; sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D JDM1_1855 pts17A; glucitol/sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D JDM1_2921 pts38BC; sorbitol PTS, EIIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D JDM1_2922 pts38C; sorbitol PTS, EIIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D JDM1_2834 pts35A; galactitol PTS, EIIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D JDM1_2880 pts36A; galactitol PTS, EIIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D JDM1_2833 pts35B; galactitol PTS, EIIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D JDM1_2881 pts36B; galactitol PTS, EIIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D JDM1_2882 pts36C; galactitol PTS, EIIC K02775 gatC; galactitol PTS system EIIC component
D JDM1_2832 galactitol PTS, EIIC K02775 gatC; galactitol PTS system EIIC component
D JDM1_0523 pts9AB; mannose PTS, EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D JDM1_0528 pts10A; mannose PTS, EIIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D JDM1_0524 pts9C; mannose PTS, EIIC K02795 manY; mannose PTS system EIIC component
D JDM1_0525 pts9D; mannose PTS, EIID K02796 manZ; mannose PTS system EIID component
D JDM1_2122 pts19A; N-acetylglucosamine/galactosamine PTS, EIIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D JDM1_2125 pts19B; N-acetylgalactosamine-specific PTS system transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-]
D JDM1_2124 pts19C; N-acetylgalactosamine PTS, EIIC K10985 agaC; galactosamine PTS system EIIC component
D JDM1_2123 pts19D; N-acetylgalactosamine-specific PTS system transporter subunit IID K10986 agaD; galactosamine PTS system EIID component
D JDM1_0575 conserved hypothetical protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D JDM1_2828 conserved hypothetical protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D JDM1_2827 pts34B; PTS, EIIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D JDM1_0576 conserved hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D JDM1_2826 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D JDM1_0577 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D JDM1_0159 conserved hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D JDM1_2758 glpF6; glycerol uptake facilitator protein K06188 aqpZ; aquaporin Z
D JDM1_1017 glpF4; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D JDM1_2738 glpF5; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D JDM1_0109 glpF1; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D JDM1_0160 gplF2; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D JDM1_0334 glpF3; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D JDM1_1444 potassium transport protein K10716 kch; voltage-gated potassium channel
D JDM1_0313 amtB; ammonium transport protein K03320 amt; ammonium transporter, Amt family
D JDM1_1125 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D JDM1_1895 mechanosensitive transport protein K22044 ybiO; moderate conductance mechanosensitive channel
D JDM1_1846 Mg2+ and Co2+ transport protein K03284 corA; magnesium transporter
D JDM1_2064 Mg2+ and Co2+ transport protein K03284 corA; magnesium transporter
D JDM1_0198 integral membrane protein K06199 crcB; fluoride exporter
D JDM1_0199 integral membrane protein K06199 crcB; fluoride exporter
D JDM1_2070 integral membrane protein K24915 TMEM175; TMEM175 potassium channel family protein
D JDM1_2473 integral membrane protein K24915 TMEM175; TMEM175 potassium channel family protein
D JDM1_2143 integral membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JDM1_0514 reticulocyte binding protein K21449 ata; trimeric autotransporter adhesin
D JDM1_0999 tail fiber K21449 ata; trimeric autotransporter adhesin
D JDM1_2612 lrgA; effector of murein hydrolase (putative) K05338 lrgA; holin-like protein
D JDM1_2778 lacS2; sugar transport protein K16209 lacS; lactose/raffinose/galactose permease
D JDM1_2761 lacS1; lactose transport protein K16209 lacS; lactose/raffinose/galactose permease
D JDM1_1452 sugar transport protein (putative) K16211 malY; maltose/moltooligosaccharide transporter
D JDM1_2820 sugar transport protein K16211 malY; maltose/moltooligosaccharide transporter
D JDM1_2896 sugar transport protein K16211 malY; maltose/moltooligosaccharide transporter
D JDM1_0835 lysP; lysine transport protein K11733 lysP; lysine-specific permease
D JDM1_1097 amino acid transport protein K16235 mmuP; S-methylmethionine transporter
D JDM1_2641 cation efflux protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JDM1_2637 qacC; quaternary ammonium compound-resistance protein K03297 emrE; small multidrug resistance pump
D JDM1_2638 qacH; quaternary ammonium compound-resistance protein K03297 emrE; small multidrug resistance pump
D JDM1_0748 sugE; GroEL supressor protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D JDM1_2015 sugar transport protein K05340 glcU; glucose uptake protein
D JDM1_2083 sugar transport protein K05340 glcU; glucose uptake protein
D JDM1_2926 rbsU; ribose transport protein K06216 rbsU; putative ribose uptake protein
D JDM1_2161 integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JDM1_1057 gntP; gluconate transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D JDM1_1527 L-lactate transport protein (putative) K03303 lutP; lactate permease
D JDM1_2262 proton/sodium-glutamate symport protein K11102 gltP; proton glutamate symport protein
D JDM1_0180 nha1; Na(+)/H(+) antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D JDM1_2675 Na(+)/H(+) antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D JDM1_2676 Na(+)/H(+) antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D JDM1_2096 Na(+)/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D JDM1_2497 Na(+)/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D JDM1_0678 Na(+)/H(+) antiporter (putative) K24163 nhaK; monovalent cation/hydrogen antiporter
D JDM1_2145 Na(+)/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D JDM1_2269 napA3; Na(+)/H(+) antiporter K26730 napA; Na+:H+ antiporter
D JDM1_0346 napA1; Na(+)/H(+) antiporter K26730 napA; Na+:H+ antiporter
D JDM1_2849 napA4; Na(+)/H(+) antiporter K26730 napA; Na+:H+ antiporter
D JDM1_1822 ntpJ; sodium ATP synthase, Na(+) translocating subunit J K03498 trkH; trk/ktr system potassium uptake protein
D JDM1_1821 ktrA; potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D JDM1_1983 pyrP; uracil transport protein K02824 uraA; uracil permease
D JDM1_2171 pucK; xanthine / uracil transport protein K16169 pbuX; xanthine permease
D JDM1_2172 transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D JDM1_1087 integral membrane protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D JDM1_0706 transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D JDM1_2564 nupC; nucleoside transport protein K16323 yxjA; purine nucleoside transport protein
D JDM1_0407 sdaC; serine transporter K03837 sdaC; serine transporter
D JDM1_0658 eriC; chloride channel protein K03281 clcA; chloride channel protein, CIC family
D JDM1_0243 mntH1; manganese transport protein K03322 mntH; manganese transport protein
D JDM1_1095 mntH3; cation transport protein K03322 mntH; manganese transport protein
D JDM1_2396 mntH2; manganese transport protein K03322 mntH; manganese transport protein
D JDM1_2711 transport protein K13936 mdcF; malonate transporter and related proteins
D JDM1_0923 mleP2; malate transport protein K24180 mleP; malate permease and related proteins
D JDM1_0536 mleP1; malate transport protein K24180 mleP; malate permease and related proteins
D JDM1_2271 mleP3; malate transport protein (putative) K24180 mleP; malate permease and related proteins
D JDM1_0425 kup1; potassium uptake protein K03549 kup; KUP system potassium uptake protein
D JDM1_2633 kup2; potassium uptake protein K03549 kup; KUP system potassium uptake protein
D JDM1_1178 amino acid efflux protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D JDM1_2549 branched-chain amino acid transport protein K26605 azlC; branched chain amino acid efflux pump
D JDM1_0815 amino acid transport protein K26605 azlC; branched chain amino acid efflux pump
D JDM1_2548 integral membrane protein K26606 azlD; branched chain amino acid efflux pump
D JDM1_0814 integral membrane protein K26606 azlD; branched chain amino acid efflux pump
D JDM1_1587 integral membrane protein K23675 fmnP; riboflavin transporter
D JDM1_2694 integral membrane protein K22736 VIT; vacuolar iron transporter family protein
D JDM1_2693 integral membrane protein K22736 VIT; vacuolar iron transporter family protein
D JDM1_1793 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D JDM1_1253 narG; nitrate reductase, alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D JDM1_1254 narH; nitrate reductase, beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D JDM1_1256 narI; nitrate reductase, gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D JDM1_0355 plnH; bacteriocin ABC transporter, accessory factor PlnH K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D JDM1_1765 cps4B; exopolysaccharide biosynthesis protein; chain length determinator K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D JDM1_1766 cps4A; exopolysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D JDM1_0231 integral membrane protein K03811 pnuC; nicotinamide mononucleotide transporter
D JDM1_0457 transport protein K03811 pnuC; nicotinamide mononucleotide transporter
D JDM1_1223 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D JDM1_1431 tspO; sensory protein K05770 TSPO; translocator protein
C 02044 Secretion system [BR:lpj02044]
D JDM1_1833 cell division protein (putative) K02221 yggT; YggT family protein
D JDM1_1786 competence protein K02237 comEA; competence protein ComEA
D JDM1_1787 competence protein K02237 comEA; competence protein ComEA
D JDM1_1785 comEB; dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D JDM1_1784 comEC; ComE operon protein 3 K02238 comEC; competence protein ComEC
D JDM1_0606 comFA; ATP-dependent DNA helicase/translocase (putative) K02240 comFA; competence protein ComFA
D JDM1_0607 late competence protein K02242 comFC; competence protein ComFC
D JDM1_1885 comGA; ComG operon protein 1 K02243 comGA; competence protein ComGA
D JDM1_1884 comGB; ComG operon protein 2 K02244 comGB; competence protein ComGB
D JDM1_1883 comGC; ComG operon protein 3 precursor K02245 comGC; competence protein ComGC
D JDM1_1882 conserved hypothetical protein K02246 comGD; competence protein ComGD
D JDM1_0844 type 4 prepilin-like proteins leader peptide processing enzyme K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JDM1_0609 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM1_0553 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JDM1_0659 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JDM1_0870 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JDM1_1374 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JDM1_1372 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D JDM1_1913 preprotein translocase, subunit (putative) K03210 yajC; preprotein translocase subunit YajC
D JDM1_2949 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM1_1300 integral membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:lpj02042]
D JDM1_2143 integral membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JDM1_2639 hly; hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:lpj02022]
D JDM1_0614 hpk3; histidine protein kinase; sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JDM1_0613 rrp3; response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D JDM1_0052 hpk1; histidine protein kinase; sensor protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D JDM1_0051 rrp1; response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D JDM1_1295 hpk5; histidine protein kinase; sensor protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D JDM1_1294 rrp5; response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D JDM1_2018 rrp7; response regulator K02483 K02483; two-component system, OmpR family, response regulator
D JDM1_1639 hpk6; histidine protein kinase; sensor protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JDM1_1638 rrp6; response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D JDM1_1244 hpk4; histidine protein kinase; sensor protein (putative) K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D JDM1_1243 rrp4; response regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D JDM1_1139 pltK; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2862 agrC; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_0349 plnB; histidine protein kinase PlnB; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2462 hpk10; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_2441 hpk9; histidine protein kinase; sensor protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D JDM1_1140 pltR; response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_2861 agrA; response regulator; accesory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_2461 rrp10; response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_0350 plnD; response regulator PlnD, repressor K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_2138 rrp8; response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
D JDM1_2908 hpk12; histidine protein kinase; sensor protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D JDM1_2907 rrp12; response regulator K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:lpj02035]
D JDM1_2569 amino acid ABC transporter, substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JDM1_2572 amino acid ABC transporter, substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lpj04812]
D JDM1_1939 mreB1; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JDM1_1972 mreB2; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JDM1_1835 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDM1_1836 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JDM1_1936 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D JDM1_1935 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D JDM1_2561 parA; chromosome partitioning protein, membrane-associated ATPase K03496 parA; chromosome partitioning protein
D JDM1_2560 parB1; chromosome partitioning protein, DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JDM1_2562 parB2; chromosome partitioning protein, DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lpj04147]
D JDM1_1614 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM1_0656 enoA1; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM1_0653 gapB; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JDM1_0654 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JDM1_1595 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JDM1_0601 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM1_1691 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JDM1_2014 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JDM1_2556 guaC; guanosine 5'-monophosphate oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JDM1_1776 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JDM1_1214 cell-cycle regulation histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JDM1_1964 hicD3; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_1054 hicD2; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0436 ldhL1; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0908 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0314 hicD1; L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JDM1_0871 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JDM1_1086 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JDM1_1745 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JDM1_0643 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JDM1_0642 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JDM1_2774 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JDM1_0018 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JDM1_0694 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JDM1_0332 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JDM1_1325 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM1_0188 serA1; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JDM1_2179 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JDM1_1802 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM1_2150 gpd; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDM1_0655 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JDM1_0538 pgm2; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM1_2535 pmg9; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:lpj02048]
D JDM1_1880 type I restriction-modification system methyltransferase subunit (putative) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D JDM1_0040 prophage Lp3 protein 12 K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D JDM1_1562 mrr; mrr restriction system protein K07448 mrr; restriction system protein
D JDM1_0424 conserved hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D JDM1_2310 conserved hypothetical protein K18842 chpS; antitoxin ChpS
D JDM1_0621 stress-responsive transcription regulator (putative) K03973 pspC; phage shock protein C
D JDM1_0360 plnX; plantaricin biosynthesis protein PlnX (putative) K07334 higB-1; toxin HigB-1
D JDM1_0361 plnY; plantaricin biosynthesis protein PlnY (putative) K21498 higA-1; antitoxin HigA-1
D JDM1_1835 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDM1_1939 mreB1; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JDM1_1972 mreB2; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JDM1_1547 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JDM1_1548 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JDM1_1946 csd3; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM1_1825 csd2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:lpj04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:lpj01504]
D JDM1_0084 fusA1; elongation factor G K18220 tetM; ribosomal protection tetracycline resistance protein
D JDM1_0200 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D JDM1_1505 cat; chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D JDM1_0396 bla1; beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D JDM1_1958 bla2; beta-lactamase (putative) K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D JDM1_0836 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JDM1_0636 aad; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JDM1_1687 dltA; D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D JDM1_1686 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D JDM1_1176 dltC2; D-alanine-poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JDM1_1685 dltC1; D-alanine-poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JDM1_1684 dltD; D-alanyl transfer protein DltD K03740 dltD; D-alanine transfer protein
D JDM1_0562 integral membrane protein (putative) K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D JDM1_2147 transcription regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D JDM1_2490 transcription regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D JDM1_2010 ABC transporter, ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D JDM1_2375 lmrA; multidrug ABC transporter, ATP-binding and permease protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lpj03100]
D JDM1_tRNA62 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JDM1_tRNA08 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM1_tRNA14 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM1_tRNA49 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM1_tRNA34 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM1_tRNA17 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM1_tRNA01 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDM1_tRNA09 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDM1_tRNA03 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDM1_tRNA19 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDM1_tRNA33 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JDM1_tRNA43 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JDM1_tRNA36 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JDM1_tRNA28 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JDM1_tRNA27 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JDM1_tRNA60 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JDM1_tRNA06 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JDM1_tRNA21 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JDM1_tRNA38 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JDM1_tRNA59 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JDM1_tRNA41 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM1_tRNA12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM1_tRNA51 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM1_tRNA32 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM1_tRNA26 tRNA-His K14226 tRNA-His; tRNA His
D JDM1_tRNA30 tRNA-His K14226 tRNA-His; tRNA His
D JDM1_tRNA40 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JDM1_tRNA13 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA50 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA29 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA07 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA10 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM1_tRNA02 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JDM1_tRNA53 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JDM1_tRNA56 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JDM1_tRNA47 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM1_tRNA46 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM1_tRNA37 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM1_tRNA44 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM1_tRNA23 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JDM1_tRNA42 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JDM1_tRNA15 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM1_tRNA48 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM1_tRNA16 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM1_tRNA45 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM1_tRNA35 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM1_tRNA39 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM1_tRNA20 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM1_tRNA61 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM1_tRNA04 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM1_tRNA52 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM1_tRNA11 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM1_tRNA25 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JDM1_tRNA18 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JDM1_tRNA05 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JDM1_tRNA24 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JDM1_tRNA54 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM1_tRNA57 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM1_tRNA22 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM1_tRNA55 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM1_tRNA58 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM1_rRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM1_rRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA09 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM1_rRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM1_rRNA11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D JDM1_2250 oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D JDM1_2251 oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D JDM1_2781 oxidoreductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D JDM1_0191 Aryl-alcohol dehydrogenase family enzyme K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D JDM1_2867 lox; lactate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D JDM1_2318 oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D JDM1_2241 oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D JDM1_1563 conserved hypothetical protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D JDM1_2315 conserved hypothetical protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D JDM1_1395 oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JDM1_0112 oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JDM1_1962 oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JDM1_1274 oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JDM1_0792 acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D JDM1_0083 acyl carrier protein phosphodiesterase (putative) K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D JDM1_1132 mrsA1; protein-methionine-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JDM1_1669 msrA4; protein-methionine-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JDM1_1543 msrA2; protein-methionine-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JDM1_1544 msrA3; methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D JDM1_2048 npr2; NADH peroxidase K05910 npr; NADH peroxidase [EC:1.11.1.1]
D JDM1_1206 npr1; NADH peroxidase K05910 npr; NADH peroxidase [EC:1.11.1.1]
D JDM1_0122 hpo; halo peroxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D JDM1_1943 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JDM1_0715 redox protein, regulator of disulfide bond formation (putative) K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D JDM1_2733 iron dependent peroxidase (putative) K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D JDM1_1428 extracellular protein K21713 lpmo; lytic chitin monoxygenase [EC:1.14.99.53]
D JDM1_2076 trxB2; thioredoxin reductase (NADPH) K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JDM1_0069 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D JDM1_2350 nrdG; anaerobic ribonucleotide reductase activator protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D JDM1_2085 pflA1; formate acetyltransferase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JDM1_2660 pflA2; formate acetyltransferase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JDM1_1427 cfa1; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JDM1_2539 cfa2; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JDM1_1477 conserved hypothetical protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D JDM1_0340 thgA1; galactoside O-acetyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18]
D JDM1_1533 transcription repressor K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D JDM1_1628 thgA2; galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D JDM1_2051 maa1; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D JDM1_2215 O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D JDM1_2297 thgA3; galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D JDM1_2312 maa2; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D JDM1_2838 maa3; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D JDM1_0187 acetyltransferase (putative) K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D JDM1_1643 acetyltransferase (putative) K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D JDM1_0106 NCAIR mutase, PurE-related protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D JDM1_0624 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D JDM1_2784 apbE3; thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JDM1_0883 apbE1; thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JDM1_2354 apbE2; thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JDM1_1366 conserved hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D JDM1_1664 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D JDM1_0681 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D JDM1_0623 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D JDM1_1159 astA; arylsulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D JDM1_0660 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D JDM1_2716 conserved hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D JDM1_2133 est1; acetylesterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D JDM1_2796 est2; acetylesterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D JDM1_2192 ptp3; protein-tyrosine phosphatase (putative) K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D JDM1_0078 ptp1; protein-tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D JDM1_2626 ptp2; protein-tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D JDM1_1764 cps4C; exopolysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D JDM1_1280 HAD superfamily hydrolase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D JDM1_0010 exopolyphosphatase-related protein (putative) K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D JDM1_0385 DNAse (putative) K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JDM1_0386 conserved hypothetical protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D JDM1_2910 dexB; glucan 1,6-alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D JDM1_2593 alpha-mannosidase (putative) K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D JDM1_2353 def2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JDM1_1806 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JDM1_2371 metal-dependent hydrolase (putative) K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52]
D JDM1_2933 pdc; p-coumaric acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D JDM1_0136 conserved hypothetical protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D JDM1_1115 conserved hypothetical protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D JDM1_0110 conserved hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D JDM1_0107 conserved hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D JDM1_0108 conserved hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D JDM1_1447 4-aminobutyrate aminotransferase K20708 E5.1.1.21; isoleucine 2-epimerase [EC:5.1.1.21]
D JDM1_2875 conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D JDM1_2555 prtM2; peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D JDM1_2696 copB; copper transporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D JDM1_0464 pacL2; cation transporting P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D JDM1_2709 pacL3; cation transporting P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D JDM1_2737 cadA; cadmium transporting P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D JDM1_0948 cation transporting P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D JDM1_2386 hypothetical protein K04767 acuB; acetoin utilization protein AcuB
D JDM1_2673 conserved hypothetical protein K19504 gfrE; glucoselysine-6-phosphate deglycase
C 99982 Energy metabolism
D JDM1_1228 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D JDM1_1513 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D JDM1_1570 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D JDM1_2936 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D JDM1_2040 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D JDM1_2144 nrdI; conserved hypothetical protein K03647 nrdI; protein involved in ribonucleotide reduction
D JDM1_0560 prophage Lp1 protein 65 K15051 endA; DNA-entry nuclease
D JDM1_2329 endA; DNA-entry nuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D JDM1_1080 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D JDM1_1591 conserved hypothetical protein K02859 ribT; riboflavin biosynthesis RibT protein
D JDM1_2759 protein kinase K03688 ubiB; ubiquinone biosynthesis protein
D JDM1_1249 mobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D JDM1_0225 oxidoreductase (putative) K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JDM1_0826 cspC; cold shock protein CspC K03704 cspA; cold shock protein
D JDM1_0028 cspL; cold shock protein CspL K03704 cspA; cold shock protein
D JDM1_0049 cspL; cold shock protein CspL K03704 cspA; cold shock protein
D JDM1_0954 cspP; cold shock protein CspP K03704 cspA; cold shock protein
D JDM1_2860 nrpR5; negative regulator of proteolysis K16509 spxA; regulatory protein spx
D JDM1_1865 nrpR3; negative regulator of proteolysis K16509 spxA; regulatory protein spx
D JDM1_0696 nrpR1; negative regulator of proteolysis K16509 spxA; regulatory protein spx
D JDM1_1622 nrpR2; negative regulator of proteolysis K16509 spxA; regulatory protein spx
D JDM1_2682 nrpR4; negative regulator of proteolysis K16509 spxA; regulatory protein spx
D JDM1_0466 tex; transcription accessory protein K06959 tex; protein Tex
C 99974 Translation
D JDM1_1869 polyribonucleotide nucleotidyltransferase (putative) K07570 GSP13; general stress protein 13
D JDM1_0442 conserved hypothetical protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D JDM1_1775 tig; trigger factor K03545 tig; trigger factor
D JDM1_0662 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D JDM1_0567 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D JDM1_1864 mecA; adaptor protein K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D JDM1_2601 nth2; DNA-(apurinic or apyrimidinic site) lyase K07457 K07457; endonuclease III related protein
D JDM1_1720 endonuclease K07461 K07461; putative endonuclease
D JDM1_1556 dprA; DNA processing protein K04096 smf; DNA processing protein
D JDM1_1463 dnaD; DNA replication protein DnaD K02086 dnaD; DNA replication protein
D JDM1_1955 cshA3; recombination factor protein RarA K07478 ycaJ; putative ATPase
D JDM1_1293 cshA2; recombination factor protein RarA K07478 ycaJ; putative ATPase
D JDM1_0041 transposase-like protein K07482 K07482; transposase, IS30 family
D JDM1_1019 Hin-like DNA-binding protein K07483 K07483; transposase
D JDM1_1020 transposase K07497 K07497; putative transposase
D JDM1_1736 Transposase (orfB) of ISLsa2 (IS150 family) K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D JDM1_0571 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D JDM1_1524 amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family
D JDM1_1878 amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family
D JDM1_2677 amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family
D JDM1_0120 amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family
D JDM1_0717 amino acid transport protein (putative) K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JDM1_0739 amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JDM1_1448 amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JDM1_2632 amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JDM1_0924 amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JDM1_2668 glycine betaine/carnitine/choline transport protein K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D JDM1_0450 dtpT; di-/tripeptide transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D JDM1_2848 transport protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D JDM1_2760 brnQ3; branched-chain amino acid transport protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D JDM1_0345 brnQ1; branched-chain amino acid transport protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D JDM1_1850 brnQ2; branched-chain amino acid transport protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D JDM1_0116 purine-cytosine transport protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D JDM1_2703 purine-cytosine transport protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D JDM1_0066 cation transport protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D JDM1_0898 cation transport protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D JDM1_0909 cation transport protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D JDM1_0439 integral membrane protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D JDM1_2946 conserved hypothetical protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
D JDM1_2440 conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D JDM1_1798 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D JDM1_2020 conserved hypothetical protein K07166 K07166; ACT domain-containing protein
D JDM1_1661 phoH; phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D JDM1_0952 lys; lysozyme (putative) K07273 acm; lysozyme
D JDM1_0520 putative phage lysin K07273 acm; lysozyme
C 99994 Others
D JDM1_0620 phoU; phosphate transport system protein K02039 phoU; phosphate transport system protein
D JDM1_1857 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
D JDM1_1952 integral membrane protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JDM1_0676 oxidoreductase (putative) K03810 mviM; virulence factor
D JDM1_1163 acetyltransferase (putative) K02348 elaA; ElaA protein
D JDM1_2691 acetyltransferase (putative) K02348 elaA; ElaA protein
D JDM1_0276 acetyltransferase (putative) K02348 elaA; ElaA protein
D JDM1_1863 coiA; competence protein K06198 coiA; competence protein CoiA
D JDM1_1220 conserved hypothetical protein K06878 K06878; tRNA-binding protein
D JDM1_0261 transport protein K06994 K06994; putative drug exporter of the RND superfamily
D JDM1_1718 HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D JDM1_2313 HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D JDM1_1229 ABC transporter component, iron regulated (putative) K09014 sufB; Fe-S cluster assembly protein SufB
D JDM1_1226 ABC transporter component (putative) K09015 sufD; Fe-S cluster assembly protein SufD
D JDM1_1016 integral membrane protein K07058 K07058; membrane protein
D JDM1_0417 conserved hypothetical protein K03744 lemA; LemA protein
D JDM1_0467 conserved hypothetical protein K03095 sprL; SprT-like protein
D JDM1_0757 DedA protein K03975 dedA; membrane-associated protein
D JDM1_1871 integral membrane protein K03975 dedA; membrane-associated protein
D JDM1_1126 integral membrane protein K01421 yhgE; putative membrane protein
D JDM1_2326 integral membrane protein K01421 yhgE; putative membrane protein
D JDM1_2629 hypothetical protein K01421 yhgE; putative membrane protein
D JDM1_0622 integral membrane protein K08972 K08972; putative membrane protein
D JDM1_1523 integral membrane protein K08974 K08974; putative membrane protein
D JDM1_0319 integral membrane protein K08987 K08987; putative membrane protein
D JDM1_2263 integral membrane protein K08996 yagU; putative membrane protein
C 99997 Function unknown
D JDM1_0337 conserved hypothetical protein K06867 K06867; uncharacterized protein
D JDM1_0401 hydrolase (putative) K06885 K06885; uncharacterized protein
D JDM1_2705 cell surface hydrolase, membrane-bound (putative) K06889 K06889; uncharacterized protein
D JDM1_2103 cell surface hydrolase, membrane-bound (putative) K06889 K06889; uncharacterized protein
D JDM1_2111 lipase/esterase (putative) K06889 K06889; uncharacterized protein
D JDM1_2365 esterase (putative) K06889 K06889; uncharacterized protein
D JDM1_2618 cell surface hydrolase, membrane-bound (putative) K06889 K06889; uncharacterized protein
D JDM1_1480 lipase/esterase (putative) K06889 K06889; uncharacterized protein
D JDM1_0391 cell surface hydrolase, membrane-bound (putative) K06889 K06889; uncharacterized protein
D JDM1_1261 integral membrane protein K06890 K06890; uncharacterized protein
D JDM1_1303 conserved hypothetical protein K06950 K06950; uncharacterized protein
D JDM1_2137 conserved hypothetical protein K06950 K06950; uncharacterized protein
D JDM1_1376 conserved hypothetical protein K06960 K06960; uncharacterized protein
D JDM1_0550 conserved hypothetical protein K06962 K06962; uncharacterized protein
D JDM1_2615 zinc-dependent proteinase (putative) K06973 K06973; uncharacterized protein
D JDM1_0542 acetyltransferase (putative) K06975 K06975; uncharacterized protein
D JDM1_2366 integral membrane protein (putative) K07035 K07035; uncharacterized protein
D JDM1_2585 metal-dependent hydrolase (putative) K07045 K07045; uncharacterized protein
D JDM1_2731 conserved hypothetical protein K07045 K07045; uncharacterized protein
D JDM1_2155 transport protein K07090 K07090; uncharacterized protein
D JDM1_1065 transport protein K07090 K07090; uncharacterized protein
D JDM1_2547 transport protein K07090 K07090; uncharacterized protein
D JDM1_0744 transport protein K07090 K07090; uncharacterized protein
D JDM1_0059 transport protein K07090 K07090; uncharacterized protein
D JDM1_1899 phosphoesterase (putative) K07095 K07095; uncharacterized protein
D JDM1_2223 conserved hypothetical protein K07105 K07105; uncharacterized protein
D JDM1_1849 conserved hypothetical protein K07118 K07118; uncharacterized protein
D JDM1_1748 short-chain dehydrogenase/oxidoreductase K07124 K07124; uncharacterized protein
D JDM1_1645 integral membrane protein K07149 K07149; uncharacterized protein
D JDM1_1416 integral membrane protein K07150 K07150; uncharacterized protein
D JDM1_2260 transport protein K07150 K07150; uncharacterized protein
D JDM1_1971 hlyA; alpha-hemolysin-like protein K08998 K08998; uncharacterized protein
D JDM1_1888 conserved hypothetical protein K09004 K09004; uncharacterized protein
D JDM1_1662 conserved hypothetical protein K09117 K09117; uncharacterized protein
D JDM1_2019 conserved hypothetical protein K09157 K09157; uncharacterized protein
D JDM1_0781 conserved hypothetical protein K09384 K09384; uncharacterized protein
D JDM1_0321 conserved hypothetical protein K09384 K09384; uncharacterized protein
D JDM1_2902 conserved hypothetical protein K09704 K09704; uncharacterized protein
D JDM1_1373 conserved hypothetical protein K09787 K09787; uncharacterized protein
D JDM1_1593 conserved hypothetical protein K00243 K00243; uncharacterized protein
D JDM1_0095 conserved hypothetical protein K09861 K09861; uncharacterized protein
D JDM1_1202 conserved hypothetical protein K09962 K09962; uncharacterized protein
D JDM1_2801 conserved hypothetical protein K09963 K09963; uncharacterized protein
D JDM1_2813 conserved hypothetical protein K09963 K09963; uncharacterized protein
D JDM1_2220 conserved hypothetical protein K09963 K09963; uncharacterized protein
D JDM1_1723 conserved hypothetical protein K09976 K09976; uncharacterized protein
D JDM1_1504 conserved hypothetical protein K05937 K05937; uncharacterized protein
D JDM1_1503 conserved hypothetical protein K05937 K05937; uncharacterized protein
D JDM1_1334 ribosomal protein (putative) K07584 ysxB; uncharacterized protein
D JDM1_1049 conserved hypothetical protein K07586 ygaC; uncharacterized protein
D JDM1_1706 conserved hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 13, 2024