+D GENES KO
#
KEGG Orthology (KO) - Pyrococcus abyssi
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pab00010]
D PAB1199 Glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PAB2013 pfk ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D PAB0967 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D PAB0049 Archaeal fructose 1,6-bisphosphate aldolase class 1A K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAB1515 fbp fructose 1,6-bisphosphatase (EC 3.1.3.11) K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D PAB1208 tpiA triosephosphate isomerase, archaeal triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAB0257 gap; gap glyceraldehyde 3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D PAB1679 pgk 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PAB2318 Probable phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PAB1126 eno; eno enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) (EC 4.2.1.11) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB0367 eno-like; eno-like enolase related K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB1441 pyk pyruvate kinase (EC 2.7.1.40) (PK) K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB0057 ppsA; ppsA probable phosphoenolpyruvate synthase (pyruvate,water dikinase) (PEP synthase) (EC 2.7.9.2) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PAB1475 porA pyruvate synthase subunit porA (EC 1.2.7.1) (pyruvate oxidoreductase alpha chain) (pyruvate ferredoxin oxidoreductase) K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PAB1476 porB pyruvate synthase subunit porB (EC 1.2.7.1) (pyruvate oxidoreductase beta chain) (pyruvate ferredoxin oxidoreductase) K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PAB1470 porG pyruvate/ketoisovalerate oxidoreductases common gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PAB1474 porD pyruvate synthase subunit porD (EC 1.2.7.1) (pyruvate oxidoreductase delta chain) (pyruvate ferredoxin oxidoreductase) K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PAB2359 korA-1; korA-1 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAB0346 korA-2; korA-2 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAB0344 korB-1; korB-1 2-ketoglutarate ferredoxin oxidoreductase, subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAB0347 korB-2; korB-2 2-ketoglutarate ferredoxin oxidoreductase, subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAB1937 acdA-2 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB0854 acdA-3 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB2112 acdA-1 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB1230 acdA-5 acetate--coA ligase (ADP-forming) (EC 6.2.1.13) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB2113 Hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PAB0203 sucC-like; acdB acetate--coA ligase (ADP-forming) (EC 6.2.1.13), beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PAB0819 pmm; PMM phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PAB1315 gor glyceraldehyde-3-phosphate: ferredoxin oxidoreductase K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6]
D PAB1253 pckA phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:pab00020]
D PAB0289 leuB-2; leuB-2 3-isopropylmalate dehydrogenase K17753 HICDH; isocitrate--homoisocitrate dehydrogenase [EC:1.1.1.286]
D PAB2359 korA-1; korA-1 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAB0346 korA-2; korA-2 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAB0344 korB-1; korB-1 2-ketoglutarate ferredoxin oxidoreductase, subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAB0347 korB-2; korB-2 2-ketoglutarate ferredoxin oxidoreductase, subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAB0345 korG-1; korG-1 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PAB0348 korG-2; korG-2 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PAB0341 korD; korD 2-ketoglutarate ferredoxin oxidoreductase, subunit delta K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D PAB2030 ttdA fumarate hydratase class I, N-terminal domain K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PAB2031 ttdB fumarate hydratase class I, C-terminal domain K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PAB1253 pckA phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D PAB1475 porA pyruvate synthase subunit porA (EC 1.2.7.1) (pyruvate oxidoreductase alpha chain) (pyruvate ferredoxin oxidoreductase) K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PAB1476 porB pyruvate synthase subunit porB (EC 1.2.7.1) (pyruvate oxidoreductase beta chain) (pyruvate ferredoxin oxidoreductase) K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PAB1470 porG pyruvate/ketoisovalerate oxidoreductases common gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PAB1474 porD pyruvate synthase subunit porD (EC 1.2.7.1) (pyruvate oxidoreductase delta chain) (pyruvate ferredoxin oxidoreductase) K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:pab00030]
D PAB1199 Glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PAB0295 tkt1; tkt1 transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PAB0296 tkt2; tkt2 transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PAB0522 rpi; rpi ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PAB1222 hps D-arabino 3-hexulose 6-phosphate formaldehyde lyase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27]
D PAB0819 pmm; PMM phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PAB0280 rbsk; rbsK ribokinase K21056 E2.7.1.212; alpha-D-ribose-1-phosphate 5-kinase (ADP) [EC:2.7.1.212]
D PAB2402 Translation initiation factor eIF-2B delta subunit (GDP-GTP exchange factor) K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29]
D PAB1114 prsA; Phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PAB0647 aor-2; aor-2 tungsten-containing aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D PAB2085 aor-1 tungsten-containing aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D PAB2330 aor-3 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D PAB0798 for; for formaldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D PAB1021 Putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PAB0049 Archaeal fructose 1,6-bisphosphate aldolase class 1A K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAB1515 fbp fructose 1,6-bisphosphatase (EC 3.1.3.11) K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D PAB2013 pfk ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D PAB0967 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
C 00040 Pentose and glucuronate interconversions [PATH:pab00040]
D PAB0770 ugd; GDP-mannose or UDP-glucose6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PAB0771 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAB0117 fucA; L-ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:pab00051]
D PAB0482 scrk; scrK fructokinase (EC 2.7.1.4) K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PAB0818 manC; manC mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase, bifunctional enzyme K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PAB0819 pmm; PMM phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PAB0317 mpg; Nucleotidyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PAB0645 Sugar-phosphate nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PAB0117 fucA; L-ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D PAB0816 Hypothetical protein K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
D PAB0817 Hypothetical protein K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D PAB0049 Archaeal fructose 1,6-bisphosphate aldolase class 1A K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAB1515 fbp fructose 1,6-bisphosphatase (EC 3.1.3.11) K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D PAB1208 tpiA triosephosphate isomerase, archaeal triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:pab00052]
D PAB2145 galE-1 UDP-glucose 4-epimerase) K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAB1299 galE-2 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAB0771 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAB0819 pmm; PMM phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PAB1740 bgaL-1 beta-galactosidase (EC 3.2.1.23) (lactase) K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PAB2376 bgal; bgaL-2 beta-galactosidase (EC 3.2.1.23) (lactase) K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PAB1349 Beta galactosidase, putative (EC 3.2.1.23) K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
C 00053 Ascorbate and aldarate metabolism
D PAB0770 ugd; GDP-mannose or UDP-glucose6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:pab00500]
D PAB0771 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAB0632 celB-like; Major extracellular endo-1,4-betaglucanase precursor (cellulase) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PAB2292 glgA glycogen synthase K20812 glgA; glycogen synthase [EC:2.4.1.242]
D PAB1857 Hypothetical protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PAB2414 agpa; Alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PAB0118 amyA; amyA alpha-amylase (or 4-alpha-glucanotransferase) K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PAB0819 pmm; PMM phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PAB1199 Glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PAB0482 scrk; scrK fructokinase (EC 2.7.1.4) K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pab00520]
D PAB0482 scrk; scrK fructokinase (EC 2.7.1.4) K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PAB2201 glmS Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAB1348 glmS-like glutamine-fructose-6-phosphate transaminase related protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAB1666 Phosphohexose mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PAB1115 graD-2; Nucleotidyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D PAB0379 wlbD; wlbD UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PAB0378 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PAB0773 cysE serine O-acetyltransferase (EC 2.3.1.30) K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D PAB0819 pmm; PMM phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PAB0771 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPgp) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAB0770 ugd; GDP-mannose or UDP-glucose6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PAB2145 galE-1 UDP-glucose 4-epimerase) K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAB1299 galE-2 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAB1199 Glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PAB0317 mpg; Nucleotidyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PAB0645 Sugar-phosphate nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PAB0818 manC; manC mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase, bifunctional enzyme K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PAB0774 aspB-like1; Pleiotropic regulatory protein degT K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00620 Pyruvate metabolism [PATH:pab00620]
D PAB1475 porA pyruvate synthase subunit porA (EC 1.2.7.1) (pyruvate oxidoreductase alpha chain) (pyruvate ferredoxin oxidoreductase) K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PAB1476 porB pyruvate synthase subunit porB (EC 1.2.7.1) (pyruvate oxidoreductase beta chain) (pyruvate ferredoxin oxidoreductase) K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PAB1470 porG pyruvate/ketoisovalerate oxidoreductases common gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PAB1474 porD pyruvate synthase subunit porD (EC 1.2.7.1) (pyruvate oxidoreductase delta chain) (pyruvate ferredoxin oxidoreductase) K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PAB2359 korA-1; korA-1 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAB0346 korA-2; korA-2 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAB0344 korB-1; korB-1 2-ketoglutarate ferredoxin oxidoreductase, subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAB0347 korB-2; korB-2 2-ketoglutarate ferredoxin oxidoreductase, subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAB1441 pyk pyruvate kinase (EC 2.7.1.40) (PK) K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB7421 acyP acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PAB1937 acdA-2 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB0854 acdA-3 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB2112 acdA-1 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB1230 acdA-5 acetate--coA ligase (ADP-forming) (EC 6.2.1.13) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB2113 Hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PAB0203 sucC-like; acdB acetate--coA ligase (ADP-forming) (EC 6.2.1.13), beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PAB0703 Hydroxyacylglutathione hydrolase related (EC 3.1.2.6) (glyoxalase II) K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PAB1792 NAD-dependent malate oxidoreductase (malic enzyme) (EC 1.1.1.38) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PAB1772 mmdB methylmalonyl-coA decarboxylase, beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PAB2030 ttdA fumarate hydratase class I, N-terminal domain K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PAB2031 ttdB fumarate hydratase class I, C-terminal domain K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PAB2342 Hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PAB1253 pckA phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D PAB0057 ppsA; ppsA probable phosphoenolpyruvate synthase (pyruvate,water dikinase) (PEP synthase) (EC 2.7.9.2) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB0286 leuA-2; leuA-2 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PAB0890 leuA-1; leuA-1 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PAB0894 leuA-3; leuA homolog alpha-isopropylmalate synthase related K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pab00630]
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB2438 Methylmalonyl-coA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAB2187 Methylmalonyl coA mutase, beta chain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PAB1800 mcmA1 methylmalonyl-coA mutase, subunit alpha K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PAB2374 gdh-like; Probable lactate dehydrogenase, D-isomer specific 2-hydroxyacid dehydrogenase family protein K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D PAB1008 D-isomer specific 2-hydroxyacid dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D PAB2394 Haloacid dehalogenase-like hydrolase, putative K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18]
D PAB1580 rbcL ribulose bisphosphate carboxylase, large subunit (EC 4.1.1.39) K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D PAB1292 glnA glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB2018 glyA serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAB1171 gcvP1 glycine dehydrogenase subunit 2 (EC 1.4.4.2) (glycine decarboxylase) (glycine cleavage system P-protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PAB1172 gcvP2 glycine dehydrogenase subunit 1 (EC 1.4.4.2) (glycine decarboxylase) (glycine cleavage system P-protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PAB1638 gcvT probable aminomethyltransferase (EC 2.1.2.10) (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAB0559 gcsH4; gcvH glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PAB1021 Putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PAB2442 fdhA-like; Formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PAB1390 Oxidoreductase iron-sulfur protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
C 00640 Propanoate metabolism [PATH:pab00640]
D PAB1937 acdA-2 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB0854 acdA-3 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB2112 acdA-1 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB1230 acdA-5 acetate--coA ligase (ADP-forming) (EC 6.2.1.13) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB2113 Hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PAB0203 sucC-like; acdB acetate--coA ligase (ADP-forming) (EC 6.2.1.13), beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PAB1475 porA pyruvate synthase subunit porA (EC 1.2.7.1) (pyruvate oxidoreductase alpha chain) (pyruvate ferredoxin oxidoreductase) K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PAB1476 porB pyruvate synthase subunit porB (EC 1.2.7.1) (pyruvate oxidoreductase beta chain) (pyruvate ferredoxin oxidoreductase) K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PAB1470 porG pyruvate/ketoisovalerate oxidoreductases common gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PAB1474 porD pyruvate synthase subunit porD (EC 1.2.7.1) (pyruvate oxidoreductase delta chain) (pyruvate ferredoxin oxidoreductase) K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PAB1921 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB2386 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB0086 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB0501 gabT; Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB2438 Methylmalonyl-coA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAB2187 Methylmalonyl coA mutase, beta chain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PAB1800 mcmA1 methylmalonyl-coA mutase, subunit alpha K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
C 00650 Butanoate metabolism [PATH:pab00650]
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB1772 mmdB methylmalonyl-coA decarboxylase, beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PAB1771 mmdC methylmalonyl-coA decarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PAB1770 mmdD-like methylmalonyl coA decarboxylase,delta chain, putative K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PAB2420 Arylmalonate decarboxylase or maleate isomerase (EC 5.2.1.1) K01799 nicE; maleate isomerase [EC:5.2.1.1]
D PAB1921 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB2386 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB0086 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB0501 gabT; Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB1475 porA pyruvate synthase subunit porA (EC 1.2.7.1) (pyruvate oxidoreductase alpha chain) (pyruvate ferredoxin oxidoreductase) K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PAB1476 porB pyruvate synthase subunit porB (EC 1.2.7.1) (pyruvate oxidoreductase beta chain) (pyruvate ferredoxin oxidoreductase) K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PAB1470 porG pyruvate/ketoisovalerate oxidoreductases common gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PAB1474 porD pyruvate synthase subunit porD (EC 1.2.7.1) (pyruvate oxidoreductase delta chain) (pyruvate ferredoxin oxidoreductase) K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PAB2359 korA-1; korA-1 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAB0346 korA-2; korA-2 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAB0344 korB-1; korB-1 2-ketoglutarate ferredoxin oxidoreductase, subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAB0347 korB-2; korB-2 2-ketoglutarate ferredoxin oxidoreductase, subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAB0906 acaA; 3-hydroxy-3-methylglutaryl coA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PAB0888 ilvB; ilvB acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pab00660]
D PAB0888 ilvB; ilvB acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB0891 leuC-1; leuC-1 3-isopropylmalate dehydratase large subunit (isopropylmalate isomerase) (EC 4.2.1.33) K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PAB0287 leuC-2; leuC-2 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PAB0892 leuD-1; leuD-1 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PAB0288 leuD-2; leuD-2 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PAB2424 leuB-1; leuB-1 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pab00562]
D PAB0189 imp1; imp1 hypothetical myo-inositol monophosphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PAB1989 ino1-like myo-inositol-1-phosphate synthase related K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D PAB2433 CDP-alcohol phosphatidyltransferase K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34]
D PAB1208 tpiA triosephosphate isomerase, archaeal triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pab00190]
D PAB0493 nuoB; nuoB NADH dehydrogenase I, subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PAB0494 nuoC; nuoC NADH dehydrogenase I, subunit C, putative K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PAB0495 nuoD; nuoD NADH dehydrognease I, subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PAB0492 nuoH; nuoH NADH dehydrogenase I, subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PAB0496 nuoI; nuoI NADH dehydrogenase I, subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PAB0490 nuoM; nuoM NADH dehydrogenase I, subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PAB2416 nuoN; nuoN NADH dehydrogenase I, subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PAB2378 atpA intein containing archaeal/vacuolar-type H+-transporting ATP synthase, subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D PAB1186 atpB archaeal/vacuolar-type H+-transporting ATP synthase, subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D PAB1183 atpC archaeal/vacuolar-type H+-transporting ATP synthase, subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D PAB2379 atpD archaeal/vacuolar-type H+-transporting ATP synthase, subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D PAB1182 atpE archaeal/vacuolar-type H+-transporting ATP synthase, subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D PAB1184 atpF archaeal/vacuolar-type H+-transporting ATP synthase, subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D PAB1179 atpH archaeal/vacuolar-type H+-ATPase subunit H K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D PAB1180 atpI archaeal/vacuolar-type H+-ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D PAB1181 atpK archaeal/vacuolar-type H+-ATPase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D PAB1104 ppa; ppa thermostable inorganic pyrophosphatase (EC 3.6.1.1) (pyrophosphate phospho-hydrolase) (PPASE) K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes [PATH:pab00720]
D PAB1475 porA pyruvate synthase subunit porA (EC 1.2.7.1) (pyruvate oxidoreductase alpha chain) (pyruvate ferredoxin oxidoreductase) K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PAB1476 porB pyruvate synthase subunit porB (EC 1.2.7.1) (pyruvate oxidoreductase beta chain) (pyruvate ferredoxin oxidoreductase) K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PAB1470 porG pyruvate/ketoisovalerate oxidoreductases common gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PAB1474 porD pyruvate synthase subunit porD (EC 1.2.7.1) (pyruvate oxidoreductase delta chain) (pyruvate ferredoxin oxidoreductase) K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PAB0057 ppsA; ppsA probable phosphoenolpyruvate synthase (pyruvate,water dikinase) (PEP synthase) (EC 2.7.9.2) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PAB2342 Hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PAB2030 ttdA fumarate hydratase class I, N-terminal domain K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PAB2031 ttdB fumarate hydratase class I, C-terminal domain K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB2359 korA-1; korA-1 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAB0346 korA-2; korA-2 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAB0344 korB-1; korB-1 2-ketoglutarate ferredoxin oxidoreductase, subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAB0347 korB-2; korB-2 2-ketoglutarate ferredoxin oxidoreductase, subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAB0345 korG-1; korG-1 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PAB0348 korG-2; korG-2 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PAB0341 korD; korD 2-ketoglutarate ferredoxin oxidoreductase, subunit delta K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D PAB2438 Methylmalonyl-coA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAB1800 mcmA1 methylmalonyl-coA mutase, subunit alpha K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PAB2187 Methylmalonyl coA mutase, beta chain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
C 00680 Methane metabolism [PATH:pab00680]
D PAB2442 fdhA-like; Formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PAB1390 Oxidoreductase iron-sulfur protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PAB2018 glyA serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAB1021 Putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PAB1126 eno; eno enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) (EC 4.2.1.11) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB0367 eno-like; eno-like enolase related K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB2342 Hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PAB0049 Archaeal fructose 1,6-bisphosphate aldolase class 1A K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAB1515 fbp fructose 1,6-bisphosphatase (EC 3.1.3.11) K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D PAB2013 pfk ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D PAB0967 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D PAB1222 hps D-arabino 3-hexulose 6-phosphate formaldehyde lyase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27]
D PAB1475 porA pyruvate synthase subunit porA (EC 1.2.7.1) (pyruvate oxidoreductase alpha chain) (pyruvate ferredoxin oxidoreductase) K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PAB1476 porB pyruvate synthase subunit porB (EC 1.2.7.1) (pyruvate oxidoreductase beta chain) (pyruvate ferredoxin oxidoreductase) K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PAB1470 porG pyruvate/ketoisovalerate oxidoreductases common gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PAB1474 porD pyruvate synthase subunit porD (EC 1.2.7.1) (pyruvate oxidoreductase delta chain) (pyruvate ferredoxin oxidoreductase) K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PAB0057 ppsA; ppsA probable phosphoenolpyruvate synthase (pyruvate,water dikinase) (PEP synthase) (EC 2.7.9.2) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PAB2318 Probable phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PAB0514 serA-like; serA D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAB1207 serB phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PAB1578 Glutamate decarboxylase (EC 4.1.1.15) K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00910 Nitrogen metabolism [PATH:pab00910]
D PAB1707 Prismane protein homolog K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D PAB0391 gdh; gdh glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PAB1292 glnA glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB1214 gltB-2 glutamate synthase small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PAB0593 cpa; cpa carbamate kinase-like carbamoylphosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:pab00920]
D PAB1595 sat sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PAB0781 cysC; cysC adenylylsulfate kinase (EC 2.7.1.25) APS kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PAB0168 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase), containing one PUA domain and 2 4Fe-4S binding domains K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PAB0639 hydG-2; Sulfhydrogenase II, gamma chain K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4]
D PAB1785 hydG-1 cytochrome-c3 hydrogenase, gamma chain K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4]
D PAB0638 hydB-2; Sulfhydrogenase II, beta chain K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4]
D PAB1784 hydB-1 cytochrome-c3 hydrogenase, beta chain (EC 1.12.2.1) K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4]
D PAB1787 hydA-1 cytochrome-c3 hydrogenase alpha chain K17993 hydA; sulfhydrogenase subunit alpha [EC:1.12.1.3 1.12.1.5]
D PAB0641 hydA-2; Sulfhydrogenase II,alpha chain K17993 hydA; sulfhydrogenase subunit alpha [EC:1.12.1.3 1.12.1.5]
D PAB1786 hydD-1 cytochrome-c3 hydrogenase delta chain K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5]
D PAB0640 hydD-2; Sulfhydrogenase II, delta chain K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5]
D PAB0605 metB; metB cystathionine gamma-synthase (EC 4.2.99.9) (CGS) (O-succinylhomoserine (thiol)-lyase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pab00061]
D PAB2177 Short-chain alcohol dehydrogenase, putative glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAB1085 fabG; Short-chain alcohol dehydrogenase, putative glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pab00071]
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pab00561]
D PAB1021 Putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PAB2406 glpk; glpK glycerol kinase (EC 2.7.1.30) K00864 glpK; glycerol kinase [EC:2.7.1.30]
C 00564 Glycerophospholipid metabolism [PATH:pab00564]
D PAB0183 glpA; Anaerobic glycerol 3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PAB0180 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PAB1907 Glycerol 1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D PAB0735 pcrB protein homolog K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41]
D PAB0018 ubiA-like; ubiA-like 4-hydroxybenzoate octaprenyltransferase, probable K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42]
D PAB1285 Membrane protein, putative K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67]
D PAB0109 bchP; Geranylgeranyl hydrogenase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D PAB1740 bgaL-1 beta-galactosidase (EC 3.2.1.23) (lactase) K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PAB2376 bgal; bgaL-2 beta-galactosidase (EC 3.2.1.23) (lactase) K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pab00230]
D PAB0819 pmm; PMM phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PAB1114 prsA; Phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PAB0151 purF; purF amidophosphoribosyltransferase (EC 2.4.2.14) K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PAB1271 purD phosphoribosylamine--glycine ligase (EC 6.3.4.13) K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PAB1268 purT phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) (GART 2) (GAR transformylase 2) (5'-phosphoribosylglycinamide transformylase 2) (formate-dependent GAR transformylase) K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PAB1201 purL phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3) K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PAB3433 purS phosphoribosylformylglycinamidine (FGAM) synthase, purS component K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D PAB1200 purQ phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAB1083 purM; purM phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PAB1077 purE; purE phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PAB2400 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC 6.3.2.6) K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PAB0829 purB; purB adenylosuccinate lyase (EC 4.3.2.2) K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PAB0547 Putative carboligase of the ATP-grasp superfamily K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23]
D PAB1272 Hypothetical protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23]
D PAB1250 guaB inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD) K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAB1489 ndk nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAB1235 Xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PAB2417 guaA-C; guaA-C GMP synthase [glutamine-hydrolyzing] pyrophosphatase subunit (EC 6.3.5.2) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAB0549 guaA-N; guaA-N GMP synthase-glutamine amidotransferase subunit (EC 6.3.5.2) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAB1659 Phosphorylase, PNP/MTAP family K26211 K26211; guanosine phosphorylase [EC:2.4.2.15]
D PAB1057 nrd; nrd inteins containing ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAB2337 nrdD anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PAB2098 Adenylate cyclase 2 K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D PAB0653 cyaB-like1; cyaB-like1 adenylyl cyclase, CyaB-type, putative K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D PAB1303 purA adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PAB1982 deoA thymidine phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57]
D PAB2140 adkA archaeal adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAB0739 adkE; adkE adenylate kinase (adk) (EC 2.7.4.3) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAB0757 Nucleotide kinase (related to CMP and AMP kinases) K18532 AK6; adenylate kinase [EC:2.7.4.3]
D PAB1537 Hypothetical ATP-binding protein, containing DUF265 domain K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D PAB2301 hit histidine triad protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D PAB0781 cysC; cysC adenylylsulfate kinase (EC 2.7.1.25) APS kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PAB1595 sat sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PAB0593 cpa; cpa carbamate kinase-like carbamoylphosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:pab00240]
D PAB1498 pyrB aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PAB1499 pyrI aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PAB1149 pyrC; pyrC dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PAB1936 pyrD dihydroorotase dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D PAB1150 pyrD-like; pyrD-like dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D PAB2430 pyrE orotate phosphoribosyl transferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PAB1505 pyrF orotidine-5'-monophosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PAB1870 pyrH uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PAB1489 ndk nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAB1125 Nucleotide-binding protein, Maf septum formation protein related K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PAB0231 pyrG; pyrG CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PAB0763 cmk; cmk cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PAB1839 upp uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PAB1982 deoA thymidine phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57]
D PAB2337 nrdD anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PAB1164 dcd; Probable deoxycytidine triphosphate deaminase (EC 3.5.4.13) K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PAB1057 nrd; nrd inteins containing ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAB1975 dCMP deaminase, putative K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PAB0319 tmk-like; tmk thymidylate kinase (dTMP kinase) K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PAB0861 thyX Flavin dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pab00250]
D PAB1523 aspC-2 aspartate aminotransferase (EC 2.6.1.1) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAB2343 nadB L-aspartate oxidase (EC 1.4.3.16) (quinolinate synthetase B) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PAB0912 racD-1; racD-1 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PAB2073 racD-2 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PAB2294 asnA-1 L-asparaginase (EC 3.5.1.1) K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PAB0145 asnA-2; asnA-2 L-asparaginase (EC 3.5.1.1) (L-asparagine amidohydrolase) (asparaginase 2) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PAB1605 Putative putative asparagine synthetase (glutamine-hydrolyzing) (EC 6.3.5.4) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PAB0750 asnB; Asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PAB1810 aat alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PAB1303 purA adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PAB0829 purB; purB adenylosuccinate lyase (EC 4.3.2.2) K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PAB1498 pyrB aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PAB1499 pyrI aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PAB1921 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB2386 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB0086 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB0501 gabT; Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB1214 gltB-2 glutamate synthase small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PAB0391 gdh; gdh glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PAB1292 glnA glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB1200 purQ phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAB2201 glmS Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAB1348 glmS-like glutamine-fructose-6-phosphate transaminase related protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAB0151 purF; purF amidophosphoribosyltransferase (EC 2.4.2.14) K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pab00260]
D PAB1675 lysC like2 aspartate kinase related K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB1674 lysC like1 aspartate kinase related K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB1678 asd aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAB0610 hom; hom homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAB1676 hk homoserine kinase (EC 2.7.1.39) K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PAB0369 thrC-like; thrC-like probable threonine synthase (EC 4.2.3.1) K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAB1677 thrC threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAB1869 Pyridoxal phosphate dependent enzyme K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAB2018 glyA serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAB1021 Putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PAB2318 Probable phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PAB0514 serA-like; serA D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAB1207 serB phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PAB1244 2-amino-3-oxobutanoate synthase (glycine C-acetyltransferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PAB2382 tdh threonine 3-dehydrogenase (EC 1.1.1.103) K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PAB1171 gcvP1 glycine dehydrogenase subunit 2 (EC 1.4.4.2) (glycine decarboxylase) (glycine cleavage system P-protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PAB1172 gcvP2 glycine dehydrogenase subunit 1 (EC 1.4.4.2) (glycine decarboxylase) (glycine cleavage system P-protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PAB1638 gcvT probable aminomethyltransferase (EC 2.1.2.10) (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAB0559 gcsH4; gcvH glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PAB2049 trpA tryptophan synthase, subunit alpha (EC 4.2.1.20) K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PAB2048 trpB tryptophan synthase, subunit beta (EC 4.2.1.20) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PAB1970 pyridoxal-phosphate dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pab00270]
D PAB0608 metE-like1; metE-like2 B12-independent methionine synthase homolog (EC 2.1.1.-) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PAB2361 metE-like2; metE-like1 B12-independent methionine synthase homolog (EC 2.1.1.-) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PAB2094 S-adenosylmethionine synthetase (EC 2.5.1.6) K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PAB1162 speH S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PAB2221 speE spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PAB2264 Phosphorylase, PNP/MTAP family K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D PAB0443 neac; Chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D PAB2444 aIF-2BI; aIF-2BI translation initiation factor aIF-2BI K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D PAB2317 Citosine-specific modificatrion methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PAB0269 Possible menaquinone biosynthesis methyltransferase K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-]
D PAB1372 ahcY adenosylhomocysteinase (EC 3.3.1.1) K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PAB2303 Putative 1-aminocyclopropane-1-carboxylate deaminase (EC 4.1.99.4) (ACC deaminase) K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D PAB1675 lysC like2 aspartate kinase related K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB1674 lysC like1 aspartate kinase related K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB1678 asd aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAB0610 hom; hom homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAB0605 metB; metB cystathionine gamma-synthase (EC 4.2.99.9) (CGS) (O-succinylhomoserine (thiol)-lyase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PAB1523 aspC-2 aspartate aminotransferase (EC 2.6.1.1) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAB0514 serA-like; serA D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAB1362 parB-like nuclease, putative K23370 serK; L-serine kinase (ADP) [EC:2.7.1.226]
C 00280 Valine, leucine and isoleucine degradation [PATH:pab00280]
D PAB1472 vorA ketoisovalerate oxidoreductase subunit vorA (EC 1.-.-.-) K00186 vorA; 2-oxoisovalerate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.7]
D PAB1473 vorB ketoisovalerate oxidoreductase subunit vorB (EC 1.-.-.-) K00187 vorB; 2-oxoisovalerate ferredoxin oxidoreductase beta subunit [EC:1.2.7.7]
D PAB1470 porG pyruvate/ketoisovalerate oxidoreductases common gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PAB1471 vorD ketoisovalerate oxidoreductase subunit vorD (EC 1.-.-.-) K00188 vorD; 2-oxoisovalerate ferredoxin oxidoreductase delta subunit [EC:1.2.7.7]
D PAB2438 Methylmalonyl-coA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAB2187 Methylmalonyl coA mutase, beta chain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PAB1800 mcmA1 methylmalonyl-coA mutase, subunit alpha K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB0906 acaA; 3-hydroxy-3-methylglutaryl coA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pab00290]
D PAB0891 leuC-1; leuC-1 3-isopropylmalate dehydratase large subunit (isopropylmalate isomerase) (EC 4.2.1.33) K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PAB0287 leuC-2; leuC-2 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PAB0892 leuD-1; leuD-1 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PAB0288 leuD-2; leuD-2 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PAB2424 leuB-1; leuB-1 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PAB0888 ilvB; ilvB acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB0889 ilvC; ilvC ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PAB0895 ilvD; ilvD dihydroxy-acid dehydratase (EC 4.2.1.9) K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PAB1810 aat alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PAB0286 leuA-2; leuA-2 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PAB0890 leuA-1; leuA-1 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PAB0894 leuA-3; leuA homolog alpha-isopropylmalate synthase related K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pab00300]
D PAB0610 hom; hom homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAB1675 lysC like2 aspartate kinase related K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB1674 lysC like1 aspartate kinase related K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB1678 asd aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAB0832 dapA; dapA dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAB0581 Metallopeptidase, M20/M25/M40 family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PAB0289 leuB-2; leuB-2 3-isopropylmalate dehydrogenase K17753 HICDH; isocitrate--homoisocitrate dehydrogenase [EC:1.1.1.286]
D PAB2227 Multiple substrate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PAB0290 rimK; rimK ribosomal protein S6 modification protein K25032 K25032; alpha-aminoadipate-LysW ligase/glutamate-LysW ligase [EC:6.3.2.43 6.3.2.60]
D PAB0292 argB; argB acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D PAB0291 argC; argC N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D PAB2440 argD; argD acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D PAB0294 argE; argE acetyl ornithine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00310 Lysine degradation
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:pab00220]
D PAB1502 argF ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PAB1200 purQ phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAB1292 glnA glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB0391 gdh; gdh glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PAB0593 cpa; cpa carbamate kinase-like carbamoylphosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PAB1523 aspC-2 aspartate aminotransferase (EC 2.6.1.1) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAB1810 aat alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PAB0723 argE-like; argE-like acetyl ornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D PAB0290 rimK; rimK ribosomal protein S6 modification protein K25032 K25032; alpha-aminoadipate-LysW ligase/glutamate-LysW ligase [EC:6.3.2.43 6.3.2.60]
D PAB0292 argB; argB acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D PAB0291 argC; argC N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D PAB2440 argD; argD acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D PAB0294 argE; argE acetyl ornithine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00330 Arginine and proline metabolism [PATH:pab00330]
D PAB0382 Hypothetical protein K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D PAB0050 speB; Agmatinase or arginase, arginase family protein K01480 speB; agmatinase [EC:3.5.3.11]
D PAB1539 Arginase related protein K01480 speB; agmatinase [EC:3.5.3.11]
D PAB2221 speE spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PAB1162 speH S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PAB0614 Putative amidohydrolase, acetamidase/formamidase family K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PAB1523 aspC-2 aspartate aminotransferase (EC 2.6.1.1) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
D PAB0026 hisC; hisC histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00350 Tyrosine metabolism [PATH:pab00350]
D PAB1523 aspC-2 aspartate aminotransferase (EC 2.6.1.1) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAB0026 hisC; hisC histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB1578 Glutamate decarboxylase (EC 4.1.1.15) K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00360 Phenylalanine metabolism [PATH:pab00360]
D PAB1523 aspC-2 aspartate aminotransferase (EC 2.6.1.1) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAB0026 hisC; hisC histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB0614 Putative amidohydrolase, acetamidase/formamidase family K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:pab00380]
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB0614 Putative amidohydrolase, acetamidase/formamidase family K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pab00400]
D PAB0297 aroG; aroG phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PAB0298 aroB; aroB 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PAB0299 aroD; aroD 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D PAB0300 aroE; aroE shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PAB0301 thrB-2; aroK shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PAB0306 aroA; aroA 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PAB0307 aroC; aroC chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PAB2045 trpE anthranilate synthase component I (EC 4.1.3.27) K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PAB2046 trpG anthranilate synthase component II (EC 4.1.3.27) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PAB2044 trpD anthranilate synthase component II (EC 4.1.3.27) K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PAB2047 trpF phosphoribosyl anthranilate isomerase (EC 5.3.1.24) K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PAB2043 trpC indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS) K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PAB2049 trpA tryptophan synthase, subunit alpha (EC 4.2.1.20) K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PAB2048 trpB tryptophan synthase, subunit beta (EC 4.2.1.20) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PAB1970 pyridoxal-phosphate dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PAB1523 aspC-2 aspartate aminotransferase (EC 2.6.1.1) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAB0026 hisC; hisC histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pab00410]
D PAB1578 Glutamate decarboxylase (EC 4.1.1.15) K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D PAB1921 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB2386 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB0086 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB0501 gabT; Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB1906 Hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
D PAB1991 Alkylphosphonate uptake/carbon-phosphorus lyase, membrane bound subunit, phnP homolog K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pab00450]
D PAB0605 metB; metB cystathionine gamma-synthase (EC 4.2.99.9) (CGS) (O-succinylhomoserine (thiol)-lyase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PAB0608 metE-like1; metE-like2 B12-independent methionine synthase homolog (EC 2.1.1.-) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PAB2361 metE-like2; metE-like1 B12-independent methionine synthase homolog (EC 2.1.1.-) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PAB0157 Cysteine desulfurase (EC 4.4.1.-) K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PAB0500 trxB; trxB thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PAB1595 sat sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PAB2364 metS; metS methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pab00460]
D PAB2294 asnA-1 L-asparaginase (EC 3.5.1.1) K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PAB0145 asnA-2; asnA-2 L-asparaginase (EC 3.5.1.1) (L-asparagine amidohydrolase) (asparaginase 2) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PAB2018 glyA serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pab00470]
D PAB1200 purQ phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAB0912 racD-1; racD-1 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PAB2073 racD-2 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 00480 Glutathione metabolism [PATH:pab00480]
D PAB2445 lamB-like lactam utilization related protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PAB2221 speE spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pab00511]
D PAB1740 bgaL-1 beta-galactosidase (EC 3.2.1.23) (lactase) K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PAB2376 bgal; bgaL-2 beta-galactosidase (EC 3.2.1.23) (lactase) K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pab00730]
D PAB1930 thiC thiamine biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PAB1646 thiD hydroxymethylpyrimidine phosphate kinase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D PAB0226 thii; thiI thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PAB0561 thiI-like; thiI-like thiamin biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PAB0536 thi1; Putative thiazole biosynthetic enzyme K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D PAB2432 thiM hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PAB1645 thiE thiamine phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PAB2358 thiL; thiL thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PAB1537 Hypothetical ATP-binding protein, containing DUF265 domain K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D PAB2366 phoA; phoA alkaline phosphatase IV precursor (EC 3.1.3.1) (APASE IV) K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PAB2140 adkA archaeal adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAB0739 adkE; adkE adenylate kinase (adk) (EC 2.7.4.3) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAB1641 Hypothetical protein, containing TENA/THI-4 domain K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PAB1642 Transcription activator, putative K20896 TENA_E; formylaminopyrimidine deformylase / aminopyrimidine aminohydrolase [EC:3.5.1.- 3.5.99.-]
C 00740 Riboflavin metabolism [PATH:pab00740]
D PAB0917 Putative transcriptional regulator K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161]
D PAB1507 taqD glycerol-3-phosphate cytidyltransferase, putative K14656 ribL; FAD synthetase [EC:2.7.7.2]
D PAB2432 thiM hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PAB0651 d1; ubiX 3-octaprenyl-4-hydroxybenzoate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pab00750]
D PAB0369 thrC-like; thrC-like probable threonine synthase (EC 4.2.3.1) K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAB1677 thrC threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAB1869 Pyridoxal phosphate dependent enzyme K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAB0537 Pyridoxine/pyridoxal 5-phosphate biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D PAB0538 hisH-like; Pyridoxine biosynthesis amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pab00760]
D PAB2343 nadB L-aspartate oxidase (EC 1.4.3.16) (quinolinate synthetase B) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PAB2345 nadA quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PAB2347 nadC nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PAB1131 nadC-like; Quinolinate phosphoribosyl transferase, putative K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PAB1318 nadM nicotinamide nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1]
D PAB2244 nadE NH(3)-dependent NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PAB1720 Amidase related to nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PAB0801 NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PAB1756 ppnK inorganic polyphosphate/ATP-NAD kinase (poly(P)/ATP NAD kinase) (EC 2.7.1.23) K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PAB2420 Arylmalonate decarboxylase or maleate isomerase (EC 5.2.1.1) K01799 nicE; maleate isomerase [EC:5.2.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:pab00770]
D PAB0888 ilvB; ilvB acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAB0889 ilvC; ilvC ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PAB0895 ilvD; ilvD dihydroxy-acid dehydratase (EC 4.2.1.9) K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PAB0570 nB; panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PAB0512 apbA; panE 2-dehydropantoate reductase (EC 1.1.1.169) K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PAB2407 Predicted archaeal sugar kinase, DUF113 family K06982 pok; pantoate kinase [EC:2.7.1.169]
D PAB1906 Hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
D PAB1897 dfp DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PAB0944 Phosphopantetheine adenylyltransferase K02201 E2.7.7.3B; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PAB1012 Predicted nucleotide kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PAB1106 Hypothetical protein K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237]
D PAB1578 Glutamate decarboxylase (EC 4.1.1.15) K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00780 Biotin metabolism [PATH:pab00780]
D PAB2177 Short-chain alcohol dehydrogenase, putative glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAB1085 fabG; Short-chain alcohol dehydrogenase, putative glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAB0096 birA; Biotin-(acetyl-coA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PAB0104 birA-like; birA-like biotin operon repressor/biotin--[acetyl coA carboxylase] ligase homolog K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pab00785]
D PAB1579 Radical SAM family protein K09711 lipS1; lipoyl synthase
D PAB2355 bioB-like; Biotin synthase related protein K24689 lipS2; lipoyl synthase
D PAB1916 lplA-like lipoate-protein ligase A related K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PAB0376 Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PAB1171 gcvP1 glycine dehydrogenase subunit 2 (EC 1.4.4.2) (glycine decarboxylase) (glycine cleavage system P-protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PAB1172 gcvP2 glycine dehydrogenase subunit 1 (EC 1.4.4.2) (glycine decarboxylase) (glycine cleavage system P-protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PAB1638 gcvT probable aminomethyltransferase (EC 2.1.2.10) (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAB0559 gcsH4; gcvH glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pab00790]
D PAB2366 phoA; phoA alkaline phosphatase IV precursor (EC 3.1.3.1) (APASE IV) K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PAB1123 6-pyruvoyl tetrahydrobiopterin synthase related protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PAB1446 Radical SAM family protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PAB2286 Hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PAB0223 Conserved hypothetical protein K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39]
D PAB1706 Hypothetical protein K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PAB0141 Predicted archaeal sugar kinase, DUF113 family K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D PAB1694 ghmP kinase putative ATP-binding protein K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D PAB0518 Beta lactamase-like protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D PAB1761 Metallo-beta-lactamase superfamily protein, putative K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D PAB1445 ptpS-like 6-pyruvoyl-tetrahydropterin synthase K22102 E4.1.2.59; dihydroneopterin phosphate aldolase [EC:4.1.2.59]
D PAB2273 moaA molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PAB2103 moaC molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PAB0110 moaE; moaE molybdopterin synthase, large chain K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PAB1354 moaB-2 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PAB1436 moeA-1 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PAB2014 moeA-2 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PAB1788 mobA-like molybdopterin-guanine dinucleotide biosynthesis protein a related K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:pab00670]
D PAB2018 glyA serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAB1638 gcvT probable aminomethyltransferase (EC 2.1.2.10) (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAB0861 thyX Flavin dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pab00860]
D PAB0323 gltX; gltX glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB2289 cobA/btuR ATP-corrinoid adenosyltransferase (EC 2.5.1.17) K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PAB0025 cbib; cbiB cobalamin biosynthesis protein B K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PAB1708 Hypothetical protein K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90]
D PAB2323 Nucleotidyltransferase, putative K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62]
D PAB2320 cobS cobalamin (5'-phosphate) synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
D PAB0651 d1; ubiX 3-octaprenyl-4-hydroxybenzoate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pab00900]
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB0906 acaA; 3-hydroxy-3-methylglutaryl coA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PAB2106 mvaA-3-hydroxy-3-methylglutaryl-coenzyme A reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D PAB0372 mvk; mvk mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D PAB0373 argB-like; Predicted archaeal kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26]
D PAB1061 Hypothetical protein K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182]
D PAB1062 Hypothetical protein K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182]
D PAB1798 ubiD 3-octaprenyl-4-hydroxybenzoate carboxylyase K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126]
D PAB0651 d1; ubiX 3-octaprenyl-4-hydroxybenzoate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PAB1662 fnI isopentenyl-diphosphate delta-isomerase (IPP isomerase) (EC 5.3.3.2) K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PAB2389 idsA-like multifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PAB0394 hypoth; uppS probable undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89]
D PAB0555 Heat shock protein/Zn-dependent protease with chaperone function, family M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PAB0295 tkt1; tkt1 transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PAB0296 tkt2; tkt2 transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pab00523]
D PAB0784 graD-3; Nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAB1053 graD-1; Nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAB1115 graD-2; Nucleotidyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D PAB0785 rfbB; rfbB dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PAB0787 rfbC; rfbC dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP-L-rhamnose synthetase) K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PAB0789 dTDP 4-dehydrorhamnose reductase (dTDP-L-rhamnose synthetase) K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:pab01054]
D PAB0912 racD-1; racD-1 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PAB2073 racD-2 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D PAB0785 rfbB; rfbB dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:pab00261]
D PAB1595 sat sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PAB1675 lysC like2 aspartate kinase related K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB1674 lysC like1 aspartate kinase related K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAB1678 asd aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAB0832 dapA; dapA dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pab00521]
D PAB0819 pmm; PMM phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PAB1989 ino1-like myo-inositol-1-phosphate synthase related K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D PAB0189 imp1; imp1 hypothetical myo-inositol monophosphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PAB0784 graD-3; Nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAB1053 graD-1; Nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAB1115 graD-2; Nucleotidyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D PAB0785 rfbB; rfbB dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PAB0787 rfbC; rfbC dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP-L-rhamnose synthetase) K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PAB0789 dTDP 4-dehydrorhamnose reductase (dTDP-L-rhamnose synthetase) K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:pab00525]
D PAB0784 graD-3; Nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAB1053 graD-1; Nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAB1115 graD-2; Nucleotidyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D PAB0785 rfbB; rfbB dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pab00401]
D PAB1523 aspC-2 aspartate aminotransferase (EC 2.6.1.1) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAB0026 hisC; hisC histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PAB2045 trpE anthranilate synthase component I (EC 4.1.3.27) K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PAB2046 trpG anthranilate synthase component II (EC 4.1.3.27) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PAB2177 Short-chain alcohol dehydrogenase, putative glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAB1085 fabG; Short-chain alcohol dehydrogenase, putative glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pab00999]
D PAB2094 S-adenosylmethionine synthetase (EC 2.5.1.6) K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PAB0300 aroE; aroE shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pab00362]
D PAB1772 mmdB methylmalonyl-coA decarboxylase, beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PAB1771 mmdC methylmalonyl-coA decarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PAB1770 mmdD-like methylmalonyl coA decarboxylase,delta chain, putative K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pab00627]
D PAB0614 Putative amidohydrolase, acetamidase/formamidase family K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PAB7421 acyP acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PAB0651 d1; ubiX 3-octaprenyl-4-hydroxybenzoate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D PAB1316 2-haloalkanoic acid dehalogenase (EC 3.8.1.2) related protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D PAB1316 2-haloalkanoic acid dehalogenase (EC 3.8.1.2) related protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D PAB1475 porA pyruvate synthase subunit porA (EC 1.2.7.1) (pyruvate oxidoreductase alpha chain) (pyruvate ferredoxin oxidoreductase) K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PAB1476 porB pyruvate synthase subunit porB (EC 1.2.7.1) (pyruvate oxidoreductase beta chain) (pyruvate ferredoxin oxidoreductase) K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PAB1470 porG pyruvate/ketoisovalerate oxidoreductases common gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PAB1474 porD pyruvate synthase subunit porD (EC 1.2.7.1) (pyruvate oxidoreductase delta chain) (pyruvate ferredoxin oxidoreductase) K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:pab00643]
D PAB0614 Putative amidohydrolase, acetamidase/formamidase family K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pab03020]
D PAB0423 rpoB; rpoB DNA-directed RNA polymerase, subunit B (EC 2.7.7.6) K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D PAB0424 rpoA1; rpoA1 DNA-directed RNA polymerase, subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D PAB0425 rpoA2; rpoA2 DNA-directed RNA polymerase, subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D PAB2410 rpoD; rpoD DNA-directed RNA polymerase, subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D PAB2316 rpoL DNA-directed RNA polymerase, subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D PAB1105 rpoE1; rpoE1 DNA-directed RNA polymerase, subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D PAB0732 rpoF DNA-directed RNA polymerase, subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D PAB7151 rpoH; rpoH DNA-directed RNA polymerase, subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D PAB7132 rpoK; rpoK DNA-directed RNA polymerase, subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D PAB7131 rpoN; rpoN DNA-directed RNA polymerase, subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D PAB3072 rpoP DNA-directed RNA polymerase, subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03022 Basal transcription factors [PATH:pab03022]
D PAB1912 TATA box binding protein TFIIB-BBRE complex, chain B K03124 TFIIB; transcription initiation factor TFIIB
D PAB1726 TATA box binding protein TFIIB-BBRE complex, chain A K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D PAB0950 Probable archaeal transcription factor, related to transcription factor TFIIE, alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D PAB2385 ERCC2/XPD/rad3 DNA repair helicase, TFIIH helicase beta subunit homolog K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pab03010]
D PAB0368 rps2P; rps2P SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D PAB2125 rps3P SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D PAB0361 rps4P; rps4P SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D PAB2136 rps5P SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D PAB0428 rps7P; rps7P SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D PAB2131 rps8E SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D PAB0366 rps9P; rps9P SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D PAB0466 rps10P; rps10P SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D PAB0362 rps11P; rps11P SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D PAB0427 rps12P; rps12P SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D PAB0360 rps13P; rps13P SSU ribosomal protein S13P/S18E K02952 RP-S13; small subunit ribosomal protein S13
D PAB7080 rps14P SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D PAB0033 rps15P; rps15P SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D PAB2127 rps17P SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D PAB2123 rps19P SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D PAB0035 rps3AE; rps3AE SSU ribosomal protein S3AE K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D PAB2397 rps4E SSU ribosomal protein S4E K02987 RP-S4e; small subunit ribosomal protein S4e
D PAB1427 rps6E SSU ribosomal protein S6E K02991 RP-S6e; small subunit ribosomal protein S6e
D PAB0749 rps8E; rps8E SSU ribosomal protein S8E K02995 RP-S8e; small subunit ribosomal protein S8e
D PAB7207 rps17E SSU ribosomal protein S17E K02962 RP-S17e; small subunit ribosomal protein S17e
D PAB1813 rps19E SSU ribosomal protein S19E K02966 RP-S19e; small subunit ribosomal protein S19e
D PAB3419 rps24E; rps24E SSU ribosomal protein S24E K02974 RP-S24e; small subunit ribosomal protein S24e
D PAB7435 rps27E SSU ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e
D PAB7165 rps28E; rps28E SSU ribosomal protein S28E K02979 RP-S28e; small subunit ribosomal protein S28e
D PAB1166 LSU ribosomal protein L1P (rpl1P) K02863 RP-L1; large subunit ribosomal protein L1
D PAB2122 rpl2P LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D PAB2120 rpl3P LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D PAB2130 rpl5P LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D PAB2132 rpl6P LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D PAB1167 rpl10E LSU ribosomal protein L10E K02864 RP-L10; large subunit ribosomal protein L10
D PAB2353 rpl11P LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D PAB1168 rpl12A LSU ribosomal protein L12A K02869 RP-L12; large subunit ribosomal protein L12
D PAB0365 rpl13P; rpl13P LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D PAB2436 rpl14P LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D PAB2138 rpl15P LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D PAB2135 rpl18P LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D PAB2396 rpl22P LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D PAB7083 rpl23P LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D PAB2128 rpl24P LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D PAB8082 rpl29P LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D PAB2137 rpl30P LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D PAB2121 rpl4P LSU ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e
D PAB0460 rpl7AE; rpl7AE LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D PAB1444 rpl10E ribosomal protein L10 K02866 RP-L10e; large subunit ribosomal protein L10e
D PAB7290 rpl14E; rpl14E LSU ribosomal protein L14E K02875 RP-L14e; large subunit ribosomal protein L14e
D PAB0575 rpl15E; rpl15E LSU ribosomal protein L15E K02877 RP-L15e; large subunit ribosomal protein L15e
D PAB0364 rpl18E; rpl18E LSU ribosomal protein L18E K02883 RP-L18e; large subunit ribosomal protein L18e
D PAB2134 rpl19E LSU ribosomal protein L19E K02885 RP-L19e; large subunit ribosomal protein L19e
D PAB0731 rpl21E; rpl21E LSU ribosomal protein L21E K02889 RP-L21e; large subunit ribosomal protein L21e
D PAB8165 rpl24E; rpl24E LSU ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e
D PAB7152 rpl30E; rpl30E LSU ribosomal protein L30E K02908 RP-L30e; large subunit ribosomal protein L30e
D PAB7387 rpl31E; rpl31E LSU ribosomal protein L31E K02910 RP-L31e; large subunit ribosomal protein L31e
D PAB2133 rpl32E LSU ribosomal protein L32E K02912 RP-L32e; large subunit ribosomal protein L32e
D PAB7289 rpL34E; rpl34E LSU ribosomal protein L34E K02915 RP-L34e; large subunit ribosomal protein L34e
D PAB7092 rpl35AE LSU ribosomal protein L35AE K02917 RP-L35Ae; large subunit ribosomal protein L35Ae
D PAB7160 rpl37E; rpl37E LSU ribosomal protein L37E K02922 RP-L37e; large subunit ribosomal protein L37e
D PAB7067 rpl37AE; rpl37AE LSU ribosomal protein L37AE K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D PAB3384 rpl39E; rpl39E LSU ribosomal protein L39E K02924 RP-L39e; large subunit ribosomal protein L39e
D PAB7211 rpl40E; rpl40E LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D PAB1221 rpl44E LSU ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e
D PAB7388 rplXA; rplXA LSU ribosomal protein LXA K02944 RP-LX; large subunit ribosomal protein LX
D 16S_rRNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 5S_rRNA-1 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pab00970]
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Tyr tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAB0323 gltX; gltX glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB1901 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7]
D PAB1902 Archaeal Glu-tRNAGln amidotransferase subunit E K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7]
D PAB1245 alaS alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB0066 alaRS-like alanyl-tRNA synthetase related protein (fragment) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB1190 alaRS-like alanyl-tRNA synthetase related protein (fragment) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB1440 alaRS-like alanyl-tRNA synthetase related protein (fragment) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB0646 aspS; aspS aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAB2203 asnS asparaginyl-tRNA synthetase (EC 6.1.1.22) (asparagine--tRNA ligase) (ASNRS) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PAB2356 asnS-like; asnS-like asparaginyl-tRNA synthetase related protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PAB0380 glyS; glyS glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAB1490 thrS threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAB0881 serS; serS seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAB0931 cysS; cysS cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAB2364 metS; metS methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAB1255 valS valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAB1782 leuS leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAB0616 ileS; ileS isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAB0139 lysS; lysS lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PAB0469 argS; argS arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAB1724 proS prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAB1100 hisS; hisS histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAB2426 pheS; pheS phenylalanyl-tRNA synthetase, subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAB2427 pheT; pheT phenylalanyl-tRNA synthetase, subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAB1728 tyrS tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAB1111 trpS; trpS tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pab03060]
D PAB2139 secY protein translocase subunit K03076 secY; preprotein translocase subunit SecY
D PAB1177 secD protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D PAB1176 secF-like protein-export membrane related protein K03074 secF; preprotein translocase subunit SecF
D PAB0320 srp54; srp54 signal recognition particle, subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D 7S_rRNA 7S ribosomal RNA K01983 ffs; SRP RNA
D PAB2025 GTP-binding signal recognition particle receptor (SRP alpha, SRP54) K03110 ftsY; fused signal recognition particle receptor
D PAB3002 Preprotein translocase secE subunit (protein transport protein SEC61 gamma subunit homolog K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D PAB2061 srp19 signal recognition particle, subunit SRP19, putative K03105 SRP19; signal recognition particle subunit SRP19
D PAB1555 arsA putative arsenical pump-driving ATPase (arsenite-translocating ATPase) (arsenical resistance ATPase) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PAB0966 Signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PAB0983 Signal peptidase related protein, putative K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pab04122]
D PAB0110 moaE; moaE molybdopterin synthase, large chain K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PAB2273 moaA molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PAB3357 moaD molybdopterin synthase, small subunit K03636 moaD; sulfur-carrier protein
D PAB3241 moaD-like; moaD-like molybdopterin converting factor related, subunit 1 K03636 moaD; sulfur-carrier protein
D PAB2302 moeB/thiF molybdopterin or thiamine synthase protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PAB2103 moaC molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PAB1354 moaB-2 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PAB0226 thii; thiI thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PAB0561 thiI-like; thiI-like thiamin biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome [PATH:pab03050]
D PAB2233 26S protease regulatory subunit 4 K03420 psmR; proteasome regulatory subunit
D PAB0417 psmA; psmA proteasome, subunit alpha (EC 3.4.99.46) K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PAB1867 psmB-like proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PAB2199 psmB proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:pab03018]
D PAB2314 RNA-binding protein, putative, containing S1 RNA binding domain K07573 CSL4; exosome complex component CSL4
D PAB0419 Predicted exosome subunit, RNA-binding protein rrp4 K03679 RRP4; exosome complex component RRP4
D PAB0421 RNAse PH-related exoribonuclease K12589 RRP42; exosome complex component RRP42
D PAB0420 rph; rph ribonuclease PH, exosome complex exonuclease K11600 RRP41; exosome complex component RRP41
D PAB1126 eno; eno enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) (EC 4.2.1.11) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB0367 eno-like; eno-like enolase related K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB1035 Predicted hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PAB1751 Metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pab03030]
D PAB0316 Primase dnaG-like K02316 dnaG; DNA primase [EC:2.7.7.101]
D PAB0352 rnhB; rnhB ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PAB1128 polI; polI DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D PAB2266 dp1/polB intein containing DNA polymerase II small subunit (2.7.7.7) K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
D PAB2404 dp2/polC intein containing DNA polymerase II large subunit (EC 2.7.7.7) K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
D PAB2373 cdc21; MCM inteins containing helicase, minichromosome maintenance protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D PAB2236 DNA primase K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D PAB2235 Eukaryotic-type DNA primase, large subunit K18882 priL; DNA primase large subunit
D PAB1465 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PAB0068 rfcS; rfcS intein containing activator 1, replication factor C, small subunit K04801 rfcS; replication factor C small subunit
D PAB0069 rfcL; rfcL activator 1, replication factor C, large subunit K04800 rfcL; replication factor C large subunit
D PAB1877 fen1 FLAP endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PAB2002 lig DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03410 Base excision repair [PATH:pab03410]
D PAB0459 nth; nth endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PAB1465 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PAB1877 fen1 FLAP endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PAB2002 lig DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D PAB1530 alkA 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PAB0474 Thermostable uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PAB1103 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PAB0034 recJ-like; recJ-like single-stranded exonuclease recJ homolog K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
C 03420 Nucleotide excision repair [PATH:pab03420]
D PAB2385 ERCC2/XPD/rad3 DNA repair helicase, TFIIH helicase beta subunit homolog K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PAB1465 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PAB2002 lig DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03430 Mismatch repair [PATH:pab03430]
D PAB1307 mutS-like DNA mismatch recognition protein, muts2 homolog K07456 mutS2; DNA mismatch repair protein MutS2
D PAB0034 recJ-like; recJ-like single-stranded exonuclease recJ homolog K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PAB1465 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PAB2002 lig DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03440 Homologous recombination [PATH:pab03440]
D PAB0034 recJ-like; recJ-like single-stranded exonuclease recJ homolog K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PAB1002 Bacterial regulatory protein, Fis family, putative K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
C 03450 Non-homologous end-joining
D PAB1877 fen1 FLAP endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
D PAB7428 rpoE2; rpoE2 DNA-directed RNA polymerase, subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
D PAB2352 nusG transcription antitermination protein K15172 SUPT5H; transcription elongation factor SPT5
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pab02010]
D PAB0101 ABC-type molybdate transport system protein, periplasmic component K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D PAB0102 Transport system permease protein, substrate unknown K15496 wtpB; molybdate/tungstate transport system permease protein
D PAB0103 ABC transporter, ATP-binding protein, substrate unknown K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D PAB1835 Thiamine-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein
D PAB0543 ABC transporter integral membrane protein K02063 thiP; thiamine transport system permease protein
D PAB0545 ABC-transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PAB0123 msmK; malK-2 ATP hydrolyzing subunit of the trehalose/maltose transport system K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAB2336 malK-1 ATP hydrolyzing subunit of the trehalose/maltose transport system K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAB0119 malE; malE maltose-binding periplasmic protein precursor (maltodextrin-binding protein) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PAB0120 malC; malF maltodextrin transport system permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAB0121 malG; malG maltose transport system permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAB0302 tmpC-like; Membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PAB0304 rbsC-1; Putative ABC-type transport system, permease component K23535 nupB; general nucleoside transport system permease protein
D PAB0305 rbsC-2; ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein
D PAB0303 rbsA; ABC-type transport system, ATPase component, substrate unknown K23537 nupA; general nucleoside transport system ATP-binding protein
D PAB2439 Extracellular solute binding protein, substrate unknown K17237 inoE; inositol-phosphate transport system substrate-binding protein
D PAB2230 Sugar transport binding protein dependent membrane protein (MALFG subfamily) K17238 inoF; inositol-phosphate transport system permease protein
D PAB2231 Sugar transport binding protein dependent protein (inner membrane) (MALFG subfamily) K17239 inoG; inositol-phosphate transport system permease protein
D PAB2232 Sugar transport, ABC transporter ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D PAB2365 phoX; pstS phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PAB0698 pstC; pstC phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D PAB0699 pstA; pstA phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D PAB0700 pstB; pstB phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PAB2248 bioY biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D PAB2261 Cobalt transport protein, cbiQ family K16785 ecfT; energy-coupling factor transport system permease protein
D PAB0249 ABC ABC-type transport system, ATPase component, substrate unknown K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PAB2260 ABC transporter, ATP-binding protein, substrate unknown K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:pab03070]
D PAB1177 secD protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D PAB1176 secF-like protein-export membrane related protein K03074 secF; preprotein translocase subunit SecF
D PAB2139 secY protein translocase subunit K03076 secY; preprotein translocase subunit SecY
D PAB2025 GTP-binding signal recognition particle receptor (SRP alpha, SRP54) K03110 ftsY; fused signal recognition particle receptor
D PAB0320 srp54; srp54 signal recognition particle, subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pab02020]
D PAB2366 phoA; phoA alkaline phosphatase IV precursor (EC 3.1.3.1) (APASE IV) K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PAB2365 phoX; pstS phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PAB0313 Putative ATP:dephospho-coA triphosphoribosyl transferase, citG family K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D PAB1792 NAD-dependent malate oxidoreductase (malic enzyme) (EC 1.1.1.38) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PAB1292 glnA glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB1329 cheR chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PAB1026 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB1336 Methyl accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB1308 Methyl-accepting chemotaxis related protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB2066 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB1027 cheW; cheW purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PAB1332 cheA chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PAB1330 cheY chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAB1331 cheB protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PAB0379 wlbD; wlbD UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PAB0378 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PAB0632 celB-like; Major extracellular endo-1,4-betaglucanase precursor (cellulase) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pab02024]
D PAB2045 trpE anthranilate synthase component I (EC 4.1.3.27) K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PAB2046 trpG anthranilate synthase component II (EC 4.1.3.27) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PAB1343 dppA-3 dipeptide transport protein precursor (dipeptide-binding protein) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB1871 ABC-type periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB0091 dppA-1; Bacterial extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB0627 appA; appA oligopeptide-binding protein appA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB1193 Hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB1344 dppB-3 dipeptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB1872 dppB-2 dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB0092 dppB-1; Binding protein-dependent transport system, inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB0628 appB-2; appB-2 oligopeptide transport system permease protein appB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB1194 dppB-1 dipeptide transport system permease protein dppB or oligopeptide transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB1345 dppC-3 ABC transporter, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB1873 dppC-2 dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB2363 appC-2; appC-2 oligopeptide transport integral membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB0093 dppC-1; Binding protein-dependent transport system, inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB1195 dppC-1 dipeptide transport system permease protein dppC or oligopeptide transport system permease protein oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB1346 dppD-3 dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB1874 dppD-2 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB0094 dppD-1; ABC transporter, ATP-binding protein, substrate unknown K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB0630 appF-2; appF-2 oligopeptide transport ATP-binding protein appF K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB1196 dppD-1 dipeptide transport system ATP-binding protein dppD or dppF or oligopeptide transport system ATP-binding protein oppD or oppF K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB1347 dppF-3 dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAB1875 dppF-2 dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAB0095 dppF-1; dppF-1 dipeptide ABC transporter, dipeptide-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAB0631 appF-3; appF-3 oligopeptide transport ATP-binding protein appF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAB1197 appF-1 dipeptide transport system ATP-binding protein dppF or oligopeptide transport system ATP-binding protein appF or oppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAB2139 secY protein translocase subunit K03076 secY; preprotein translocase subunit SecY
D PAB2025 GTP-binding signal recognition particle receptor (SRP alpha, SRP54) K03110 ftsY; fused signal recognition particle receptor
D PAB0320 srp54; srp54 signal recognition particle, subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pab02030]
D PAB1026 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB1336 Methyl accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB1308 Methyl-accepting chemotaxis related protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB2066 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB1332 cheA chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PAB1027 cheW; cheW purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PAB1330 cheY chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAB1333 cheC-2 chemotaxis protein cheC K03410 cheC; chemotaxis protein CheC
D PAB1334 cheC-1 chemotaxis protein cheC K03410 cheC; chemotaxis protein CheC
D PAB1331 cheB protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PAB1335 cheD chemotaxis protein cheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D PAB1329 cheR chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
C 02040 Flagellar assembly
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PAB1126 eno; eno enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) (EC 4.2.1.11) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB0367 eno-like; eno-like enolase related K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D PAB2398 Lysine arginine ornithine transport system kinase K07588 MMAA; GTPase [EC:3.6.5.-]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pab01000]
C 01001 Protein kinases [BR:pab01001]
D PAB1047 Hypothetical protein K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D PAB0405 Predicted serine/threonine protein kinase, rio1 family K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PAB1013 Predicted serine/threonine protein kinase, RIO-like K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D PAB1332 cheA chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pab01009]
D PAB0959 Translation initiation factor eIF-2, beta subunit, putative K03238 EIF2S2; translation initiation factor 2 subunit 2
D PAB1372 ahcY adenosylhomocysteinase (EC 3.3.1.1) K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PAB1207 serB phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pab01002]
D PAB1309 flaK flagella-related protein K K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D PAB0909 vhtD; Hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D PAB0576 Hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D PAB1419 pcp pyrrolidone-carboxylate peptidase (EC 3.4.19.3) (5-oxoprolyl-peptidase) (pyroglutamyl-peptidase I) K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D PAB2417 guaA-C; guaA-C GMP synthase [glutamine-hydrolyzing] pyrophosphatase subunit (EC 6.3.5.2) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAB0549 guaA-N; guaA-N GMP synthase-glutamine amidotransferase subunit (EC 6.3.5.2) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAB0151 purF; purF amidophosphoribosyltransferase (EC 2.4.2.14) K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PAB2201 glmS Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAB1348 glmS-like glutamine-fructose-6-phosphate transaminase related protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAB1605 Putative putative asparagine synthetase (glutamine-hydrolyzing) (EC 6.3.5.4) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PAB0750 asnB; Asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PAB0311 pfpI; pfpI intracellular protease. protease I K26818 pfpI; archaeal arginyl aminopeptidase [EC:3.4.11.27]
D PAB0241 Probable protease, caaX family K07052 K07052; CAAX protease family protein
D PAB0268 Probable protease, caaX family K07052 K07052; CAAX protease family protein
D PAB0274 Probable protease, caaX family K07052 K07052; CAAX protease family protein
D PAB0581 Metallopeptidase, M20/M25/M40 family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PAB1434 map methionine aminopeptidase (EC 3.4.11.18) K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PAB1637 pepQ-2 cobalt-dependent proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PAB1781 pepQ-3 X-pro aminopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PAB2178 pepQ-1 X-pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PAB1320 Thermostable carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D PAB0437 endO 1,4-betaglucanase (cellulase M) (EGM) K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-]
D PAB2096 Aminopeptidase from family M42 K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-]
D PAB0555 Heat shock protein/Zn-dependent protease with chaperone function, family M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D PAB0758 htpX; Heat shock protein/Zn-dependent protease with chaperone function, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PAB2097 Hypothetical protein K06974 amzA; archaemetzincin [EC:3.4.-.-]
D PAB2114 Metallopeptidase-2 K06974 amzA; archaemetzincin [EC:3.4.-.-]
D PAB1969 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D PAB0037 Membrane protein, putative K24131 prsW; protease PrsW [EC:3.4.-.-]
D PAB0045 D-aminopeptidase (EC 3.4.11.19) K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D PAB0762 preP prolyl oligopeptidase (EC 3.4.21.26) K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D PAB1313 lon intein containing ATP-dependent protease La homolog K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D PAB0966 Signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PAB0983 Signal peptidase related protein, putative K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PAB1960 Putative protease K04773 sppA; protease IV [EC:3.4.21.-]
D PAB0417 psmA; psmA proteasome, subunit alpha (EC 3.4.99.46) K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PAB1867 psmB-like proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PAB2199 psmB proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PAB0145 asnA-2; asnA-2 L-asparaginase (EC 3.5.1.1) (L-asparagine amidohydrolase) (asparaginase 2) K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PAB1548 tldD-like modulator of DNA gyrase, tldD protein homolog K03592 pmbA; PmbA protein
D PAB1547 tldD-like modulator of DNA gyrase, tldD protein homolog K03568 tldD; TldD protein
D PAB0154 tldD; tldD-like modulator of DNA gyrase, tldD protein homolog K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:pab01003]
D PAB1288 GNPTA UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC 2.7.8.15) (GTP) (G1PT) (N-acetylglucosamine-1-phosphate transferase) (GLCNAC-1-P transferase) K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15]
D PAB0974 Oligosaccharyl transferase, STT3 subunit K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18]
D PAB2202 Oligosaccharyl transferase, STT3 subunit K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21]
D PAB1586 Oligosaccharyl transferase, STT3 subunit K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21]
D PAB2307 dpm1 dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D PAB0816 Hypothetical protein K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pab01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins
C 01004 Lipid biosynthesis proteins [BR:pab01004]
D PAB2177 Short-chain alcohol dehydrogenase, putative glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAB1085 fabG; Short-chain alcohol dehydrogenase, putative glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAB1937 acdA-2 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB0854 acdA-3 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB2112 acdA-1 acetate--coA ligase (ADP-forming) (EC 6.2.1.13), alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB1230 acdA-5 acetate--coA ligase (ADP-forming) (EC 6.2.1.13) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PAB2113 Hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PAB0203 sucC-like; acdB acetate--coA ligase (ADP-forming) (EC 6.2.1.13), beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
C 01008 Polyketide biosynthesis proteins [BR:pab01008]
D PAB0912 racD-1; racD-1 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PAB2073 racD-2 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:pab01006]
D PAB2389 idsA-like multifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
C 01007 Amino acid related enzymes [BR:pab01007]
D PAB0139 lysS; lysS lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PAB0323 gltX; gltX glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB1728 tyrS tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAB1111 trpS; trpS tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PAB0931 cysS; cysS cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAB0469 argS; argS arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAB2364 metS; metS methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAB0616 ileS; ileS isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAB1255 valS valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAB1782 leuS leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAB0646 aspS; aspS aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAB2203 asnS asparaginyl-tRNA synthetase (EC 6.1.1.22) (asparagine--tRNA ligase) (ASNRS) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PAB2356 asnS-like; asnS-like asparaginyl-tRNA synthetase related protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PAB1100 hisS; hisS histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAB0380 glyS; glyS glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAB0881 serS; serS seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAB1724 proS prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAB1490 thrS threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAB1245 alaS alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB0066 alaRS-like alanyl-tRNA synthetase related protein (fragment) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB1190 alaRS-like alanyl-tRNA synthetase related protein (fragment) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB1440 alaRS-like alanyl-tRNA synthetase related protein (fragment) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB2426 pheS; pheS phenylalanyl-tRNA synthetase, subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAB2427 pheT; pheT phenylalanyl-tRNA synthetase, subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAB1523 aspC-2 aspartate aminotransferase (EC 2.6.1.1) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAB1810 aat alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PAB0525 aspC; aspC-1 aspartate aminotransferase (EC 2.6.1.1) K10907 K10907; aminotransferase [EC:2.6.1.-]
D PAB0026 hisC; hisC histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAB1244 2-amino-3-oxobutanoate synthase (glycine C-acetyltransferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PAB2440 argD; argD acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D PAB1921 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB2386 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB0086 Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB0501 gabT; Pyridoxal phosphate-dependent aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAB0774 aspB-like1; Pleiotropic regulatory protein degT K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pab03000]
D PAB2317 Citosine-specific modificatrion methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PAB1726 TATA box binding protein TFIIB-BBRE complex, chain A K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D PAB0392 Transcriptional regulatory protein Lrp-AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PAB1938 Transcriptional regulatory protein, Lrp-AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PAB0625 Transcription regulatory protein, arsR family, zinc exporter/cadmium efflux system accessory protein homolog K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D PAB0208 Putative transcriptional regulator K07721 K07721; ArsR family transcriptional regulator
D PAB0877 Hypothetical protein K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator
D PAB0714 Iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D PAB0096 birA; Biotin-(acetyl-coA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PAB0104 birA-like; birA-like biotin operon repressor/biotin--[acetyl coA carboxylase] ligase homolog K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PAB0838 Hypothetical protein, contains helix-turn-helix motif K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D PAB1517 tfx DNA binding protein K09714 tfx; HTH-type transcriptional regulator, fmd operon transcriptional regulator
D PAB1691 Hypothetical protein K07725 csa3; CRISPR-associated protein Csa3
D PAB2104 Hypothetical protein, containing helix-turn-helix motif K07728 K07728; putative transcriptional regulator
D PAB7155 Helix-turn-helix repressor protein family K07729 K07729; putative transcriptional regulator
D PAB0475 Predicted transcriptional regulator K07731 K07731; putative transcriptional regulator
D PAB0960 nikR nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D PAB1641 Hypothetical protein, containing TENA/THI-4 domain K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 03021 Transcription machinery [BR:pab03021]
D PAB1912 TATA box binding protein TFIIB-BBRE complex, chain B K03124 TFIIB; transcription initiation factor TFIIB
D PAB1726 TATA box binding protein TFIIB-BBRE complex, chain A K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D PAB0950 Probable archaeal transcription factor, related to transcription factor TFIIE, alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D PAB2385 ERCC2/XPD/rad3 DNA repair helicase, TFIIH helicase beta subunit homolog K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PAB7428 rpoE2; rpoE2 DNA-directed RNA polymerase, subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
D PAB2352 nusG transcription antitermination protein K15172 SUPT5H; transcription elongation factor SPT5
D PAB0955 ATP(GTP)binding protein K24104 GPN; GPN-loop GTPase
D PAB0426 nusA; nusA transcription termination-antitermination factor nusA, putative K02600 nusA; transcription termination/antitermination protein NusA
D PAB0424 rpoA1; rpoA1 DNA-directed RNA polymerase, subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D PAB0425 rpoA2; rpoA2 DNA-directed RNA polymerase, subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D PAB0423 rpoB; rpoB DNA-directed RNA polymerase, subunit B (EC 2.7.7.6) K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D PAB2410 rpoD; rpoD DNA-directed RNA polymerase, subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D PAB1105 rpoE1; rpoE1 DNA-directed RNA polymerase, subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D PAB0732 rpoF DNA-directed RNA polymerase, subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D PAB7151 rpoH; rpoH DNA-directed RNA polymerase, subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D PAB7132 rpoK; rpoK DNA-directed RNA polymerase, subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D PAB2316 rpoL DNA-directed RNA polymerase, subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D PAB7131 rpoN; rpoN DNA-directed RNA polymerase, subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D PAB3072 rpoP DNA-directed RNA polymerase, subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
D PAB1464 tfs archaeal transcription factor S K03057 tfs; transcription factor S
C 03019 Messenger RNA biogenesis [BR:pab03019]
D PAB7428 rpoE2; rpoE2 DNA-directed RNA polymerase, subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
D PAB2352 nusG transcription antitermination protein K15172 SUPT5H; transcription elongation factor SPT5
D PAB2086 Cdc48 cell division control protein 48, AAA family K13525 VCP; transitional endoplasmic reticulum ATPase
D PAB1478 ATPase of the AAA+ family K13525 VCP; transitional endoplasmic reticulum ATPase
D PAB0468 pelA; pelA cell division protein pelota K06965 PELO; protein pelota
D PAB0396 prf1 peptide chain release factor subunit 1 (translation termination factor ARF1) K03265 ETF1; peptide chain release factor subunit 1
D PAB0465 tuf; tuf translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha
D PAB2314 RNA-binding protein, putative, containing S1 RNA binding domain K07573 CSL4; exosome complex component CSL4
D PAB0419 Predicted exosome subunit, RNA-binding protein rrp4 K03679 RRP4; exosome complex component RRP4
D PAB0420 rph; rph ribonuclease PH, exosome complex exonuclease K11600 RRP41; exosome complex component RRP41
D PAB0421 RNAse PH-related exoribonuclease K12589 RRP42; exosome complex component RRP42
D PAB1035 Predicted hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PAB1751 Metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PAB1126 eno; eno enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) (EC 4.2.1.11) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB0367 eno-like; eno-like enolase related K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB2313 Probable ATP-dependent RNA helicase K03725 K03725; putative ATP-dependent RNA helicase [EC:5.6.2.-]
C 03041 Spliceosome
C 03011 Ribosome [BR:pab03011]
D PAB0035 rps3AE; rps3AE SSU ribosomal protein S3AE K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D PAB2397 rps4E SSU ribosomal protein S4E K02987 RP-S4e; small subunit ribosomal protein S4e
D PAB1427 rps6E SSU ribosomal protein S6E K02991 RP-S6e; small subunit ribosomal protein S6e
D PAB0749 rps8E; rps8E SSU ribosomal protein S8E K02995 RP-S8e; small subunit ribosomal protein S8e
D PAB7207 rps17E SSU ribosomal protein S17E K02962 RP-S17e; small subunit ribosomal protein S17e
D PAB1813 rps19E SSU ribosomal protein S19E K02966 RP-S19e; small subunit ribosomal protein S19e
D PAB3419 rps24E; rps24E SSU ribosomal protein S24E K02974 RP-S24e; small subunit ribosomal protein S24e
D PAB7435 rps27E SSU ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e
D PAB7165 rps28E; rps28E SSU ribosomal protein S28E K02979 RP-S28e; small subunit ribosomal protein S28e
D PAB2121 rpl4P LSU ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e
D PAB0460 rpl7AE; rpl7AE LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D PAB1444 rpl10E ribosomal protein L10 K02866 RP-L10e; large subunit ribosomal protein L10e
D PAB7290 rpl14E; rpl14E LSU ribosomal protein L14E K02875 RP-L14e; large subunit ribosomal protein L14e
D PAB0575 rpl15E; rpl15E LSU ribosomal protein L15E K02877 RP-L15e; large subunit ribosomal protein L15e
D PAB0364 rpl18E; rpl18E LSU ribosomal protein L18E K02883 RP-L18e; large subunit ribosomal protein L18e
D PAB2134 rpl19E LSU ribosomal protein L19E K02885 RP-L19e; large subunit ribosomal protein L19e
D PAB0731 rpl21E; rpl21E LSU ribosomal protein L21E K02889 RP-L21e; large subunit ribosomal protein L21e
D PAB8165 rpl24E; rpl24E LSU ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e
D PAB7152 rpl30E; rpl30E LSU ribosomal protein L30E K02908 RP-L30e; large subunit ribosomal protein L30e
D PAB7387 rpl31E; rpl31E LSU ribosomal protein L31E K02910 RP-L31e; large subunit ribosomal protein L31e
D PAB2133 rpl32E LSU ribosomal protein L32E K02912 RP-L32e; large subunit ribosomal protein L32e
D PAB7289 rpL34E; rpl34E LSU ribosomal protein L34E K02915 RP-L34e; large subunit ribosomal protein L34e
D PAB7092 rpl35AE LSU ribosomal protein L35AE K02917 RP-L35Ae; large subunit ribosomal protein L35Ae
D PAB7160 rpl37E; rpl37E LSU ribosomal protein L37E K02922 RP-L37e; large subunit ribosomal protein L37e
D PAB7067 rpl37AE; rpl37AE LSU ribosomal protein L37AE K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D PAB3384 rpl39E; rpl39E LSU ribosomal protein L39E K02924 RP-L39e; large subunit ribosomal protein L39e
D PAB7211 rpl40E; rpl40E LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D PAB1221 rpl44E LSU ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e
D PAB0368 rps2P; rps2P SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D PAB2125 rps3P SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D PAB0361 rps4P; rps4P SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D PAB2136 rps5P SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D PAB0428 rps7P; rps7P SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D PAB2131 rps8E SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D PAB0366 rps9P; rps9P SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D PAB0466 rps10P; rps10P SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D PAB0362 rps11P; rps11P SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D PAB0427 rps12P; rps12P SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D PAB0360 rps13P; rps13P SSU ribosomal protein S13P/S18E K02952 RP-S13; small subunit ribosomal protein S13
D PAB7080 rps14P SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D PAB0033 rps15P; rps15P SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D PAB2127 rps17P SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D PAB2123 rps19P SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D PAB1166 LSU ribosomal protein L1P (rpl1P) K02863 RP-L1; large subunit ribosomal protein L1
D PAB2122 rpl2P LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D PAB2120 rpl3P LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D PAB2130 rpl5P LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D PAB2132 rpl6P LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D PAB1167 rpl10E LSU ribosomal protein L10E K02864 RP-L10; large subunit ribosomal protein L10
D PAB2353 rpl11P LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D PAB0365 rpl13P; rpl13P LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D PAB2436 rpl14P LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D PAB2138 rpl15P LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D PAB2135 rpl18P LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D PAB2396 rpl22P LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D PAB7083 rpl23P LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D PAB2128 rpl24P LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D PAB8082 rpl29P LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D PAB2137 rpl30P LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D PAB1168 rpl12A LSU ribosomal protein L12A K02869 RP-L12; large subunit ribosomal protein L12
D PAB7388 rplXA; rplXA LSU ribosomal protein LXA K02944 RP-LX; large subunit ribosomal protein LX
D 5S_rRNA-1 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 16S_rRNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pab03009]
D PAB2305 Nop58p-like pre mRNA splicing protein K14564 NOP56; nucleolar protein 56
D PAB0356 trub; truB tRNA pseudouridine synthase II K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D PAB7213 Small nucleolar ribonucleoprotein, trans-acting factor intervening in ribosome biogenesis K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D PAB2357 Component of the U3 small nucleolar ribonucleoprotein, imp4 homolog K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D PAB1852 Hypothetical protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D PAB0406 Predicted RNA-binding protein K06961 KRR1; ribosomal RNA assembly protein
D PAB0405 Predicted serine/threonine protein kinase, rio1 family K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PAB1013 Predicted serine/threonine protein kinase, RIO-like K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D PAB0757 Nucleotide kinase (related to CMP and AMP kinases) K18532 AK6; adenylate kinase [EC:2.7.4.3]
D PAB0824 ABC transporter ATP-binding protein K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
D PAB0558 obg-like; GTP-binding protein, putative K06943 NOG1; nucleolar GTP-binding protein
D PAB2126 RNAse P protein subunit P29/POP4 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D PAB0467 RNAse P subunit P14 ortholog K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D PAB1136 Ribonuclease P subunit rpp30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PAB0124 Predicted GTPase or GTP-binding protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
D PAB1005 eif-6; Ribosome anti-association factor eIF6 homolog K03264 EIF6; translation initiation factor 6
D PAB1716 Hypothetical protein K07562 NMD3; 60S ribosomal export protein NMD3
D PAB0418 Hypothetical protein K14574 SDO1; ribosome maturation protein SDO1
D PAB2086 Cdc48 cell division control protein 48, AAA family K13525 VCP; transitional endoplasmic reticulum ATPase
D PAB1478 ATPase of the AAA+ family K13525 VCP; transitional endoplasmic reticulum ATPase
D PAB0176 Protein involved in ribosomal biogenesis K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D PAB1065 Hypothetical protein, possibly GTP-binding K03595 era; GTPase
D PAB2306 Fibrillarin pre-rRNA splicing protein K04795 flpA; fibrillarin-like pre-rRNA processing protein
D PAB0460 rpl7AE; rpl7AE LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D PAB3084 Hypothetical protein K07569 gar1; RNA-binding protein
D PAB0426 nusA; nusA transcription termination-antitermination factor nusA, putative K02600 nusA; transcription termination/antitermination protein NusA
D PAB0253 ksgA; ksgA dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PAB2390 Sun/NOL1/NOP nucleolar protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PAB0830 Sun/NOL1/NOP2 nucleolar protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PAB1237 Hypothetical protein, Met-10+ like protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PAB0760 RNA methyltransferase, putative K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D PAB1098 N-terminal acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PAB0722 hflX-like; hflX-like GTP-binding protein hflx K03665 hflX; GTPase
D PAB1302 Putative translation factor, SUA5 related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PAB1812 Hypothetical protein, UPF0044 family K07574 yhbY; RNA-binding protein
D PAB1357 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D PAB0071 Ribonuclease E homolog, putative K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-]
C 03016 Transfer RNA biogenesis [BR:pab03016]
D PAB2126 RNAse P protein subunit P29/POP4 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D PAB0467 RNAse P subunit P14 ortholog K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D PAB1136 Ribonuclease P subunit rpp30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PAB0385 RNAse P protein subunit RPR2 K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
D PAB0728 Putative sulfatase, ATSA/ELAC family K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PAB0383 rtcB homolog, intein containing K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D PAB1946 Hypothetical protein K24956 ZBTB8OS; protein archease
D PAB0465 tuf; tuf translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha
D PAB0323 gltX; gltX glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB1724 proS prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAB0616 ileS; ileS isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAB1782 leuS leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAB2364 metS; metS methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAB0469 argS; argS arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAB0646 aspS; aspS aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAB1245 alaS alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB0066 alaRS-like alanyl-tRNA synthetase related protein (fragment) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB1190 alaRS-like alanyl-tRNA synthetase related protein (fragment) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB1440 alaRS-like alanyl-tRNA synthetase related protein (fragment) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAB2203 asnS asparaginyl-tRNA synthetase (EC 6.1.1.22) (asparagine--tRNA ligase) (ASNRS) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PAB2356 asnS-like; asnS-like asparaginyl-tRNA synthetase related protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PAB0380 glyS; glyS glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAB1490 thrS threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAB0881 serS; serS seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAB0931 cysS; cysS cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAB1255 valS valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAB1100 hisS; hisS histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAB2426 pheS; pheS phenylalanyl-tRNA synthetase, subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAB2427 pheT; pheT phenylalanyl-tRNA synthetase, subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAB1728 tyrS tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAB1111 trpS; trpS tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PAB2349 Hypothetical protein K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PAB1134 Hypothetical protein, UPF0004 family K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
D PAB2092 TRM1 N2,N2-dimethylguanosine tRNA methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D PAB1173 Sun/NOL1/NOP nucleolar protein K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D PAB2272 Hypothetical protein, Met-10+ like protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PAB0505 Hypothetical protein, Met-10+ like protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PAB0283 pimT-like; SAM-dependent methyltransferase, putative K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D PAB2039 Radical SAM family protein K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D PAB1538 Hypothetical protein, Met-10+ like protein K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114]
D PAB0615 Hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D PAB2159 Hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D PAB1701 truA pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PAB0430 Hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D PAB2391 Hypothetical protein, containing THUMP domain K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
D PAB1047 Hypothetical protein K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D PAB1159 gcp; gcp O-sialoglycoprotein endopeptidase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D PAB1215 N-acetyltransferase, GNAT family K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D PAB1302 Putative translation factor, SUA5 related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PAB0046 Hypothetical protein, sharing a conserved domain with thiamine biosynthesis protein thiI K06963 TAN1; tRNA acetyltransferase TAN1
D PAB0051 Hypothetical protein sharing a conserved domain with thiamine biosynthesis protein thiI K06963 TAN1; tRNA acetyltransferase TAN1
D PAB0263 Conserved archaebacterial protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5]
D PAB0063 cca; cca tRNA nucleotidyltransferase (CCA adding enzyme) K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72]
D PAB1099 endA; Archaeal tRNA intron endonuclease (EC 3.1.27.9) K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
D PAB0062 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D PAB2247 Probable RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D PAB0139 lysS; lysS lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PAB0719 RNA methyltransferase, putative K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D PAB1866 Hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D PAB0523 Nucleolar protein from the nop2 family K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-]
D PAB0880 Hypothetical protein K15566 trm10; tRNA (adenine9-N1/guanine9-N1)-methyltransferase [EC:2.1.1.218 2.1.1.221]
D PAB0923 Putative RNA methylase, UPF0020 family K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256]
D PAB1283 Methylase, puative RNA modification protein K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213]
D PAB1040 Uncharacterized ArCR K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206]
D PAB1947 Sun/NOL1/NOP2 nucleolar protein K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-]
D PAB1092 Predicted ATPase of the PP-loop superfamilyl K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D PAB1522 Hypothetical protein K09119 cgi121; KEOPS complex subunit Cgi121
D PAB3073 Hypothetical protein K09741 pcc1; KEOPS complex subunit Pcc1
D PAB2286 Hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PAB1123 6-pyruvoyl tetrahydrobiopterin synthase related protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PAB1446 Radical SAM family protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PAB0740 tgtA; Queuine-archaeosine tRNA ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48]
D PAB0226 thii; thiI thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PAB0561 thiI-like; thiI-like thiamin biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PAB0247 Predicted DNA-binding protein K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22]
D PAB2428 Acetyltransferase (GNAT) family, containing ATP/GTP-binding site motif A K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
C 03012 Translation factors [BR:pab03012]
D PAB2441 aif1A; eIF1A translation initiation factor eIF-1A K03236 EIF1A; translation initiation factor 1A
D PAB7082 suI1-like protein translation factor SUI1 homolog K03113 EIF1; translation initiation factor 1
D PAB0568 aif2A; eIF2A translation initiation factor eIF-2, subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1
D PAB0959 Translation initiation factor eIF-2, beta subunit, putative K03238 EIF2S2; translation initiation factor 2 subunit 2
D PAB2040 eIF2G translation initiation factor eIF-2, subunit gamma (eIF2G) K03242 EIF2S3; translation initiation factor 2 subunit 3
D PAB1306 Putative translation initiation factor eIF-2B delta subunit K03680 EIF2B4; translation initiation factor eIF-2B subunit delta
D PAB1854 Translation initiation factor eIF5A (hypusine containing) K03263 EIF5A; translation initiation factor 5A
D PAB0755 infB; infB intein containing translation initiation factor aIF-2 K03243 EIF5B; translation initiation factor 5B
D PAB1005 eif-6; Ribosome anti-association factor eIF6 homolog K03264 EIF6; translation initiation factor 6
D PAB0465 tuf; tuf translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha
D PAB3009 EF-1 beta translation elongation factor EF-1, subunit beta K03232 EEF1B; elongation factor 1-beta
D PAB0187 fus; fus translation elongation factor EF-2 K03234 EEF2; elongation factor 2
D PAB0746 Putative diphthamide synthesis protein K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108]
D PAB0759 Predicted ATPases of PP-loop superfamily K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14]
D PAB0396 prf1 peptide chain release factor subunit 1 (translation termination factor ARF1) K03265 ETF1; peptide chain release factor subunit 1
D PAB0284 Predicted rRNA or tRNA methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PAB0429 Hypothetical protein K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]
C 03110 Chaperones and folding catalysts [BR:pab03110]
D PAB2341 thermosome subunit (chaperonin subunit) K22447 cct; archaeal chaperonin
D PAB2072 Hsp20 small heat shock protein K13993 HSP20; HSP20 family protein
D PAB1006 Prefoldin alpha subunit (gimC alpha subunit) K04797 pfdA; prefoldin alpha subunit
D PAB1364 Prefoldin beta subunit (gimC beta subunit) K04798 pfdB; prefoldin beta subunit
D PAB0399 hypA; hypA hydrogenase expression/formation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D PAB1864 slyD FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
C 04131 Membrane trafficking [BR:pab04131]
D PAB1489 ndk nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAB2086 Cdc48 cell division control protein 48, AAA family K13525 VCP; transitional endoplasmic reticulum ATPase
D PAB1478 ATPase of the AAA+ family K13525 VCP; transitional endoplasmic reticulum ATPase
D PAB1555 arsA putative arsenical pump-driving ATPase (arsenite-translocating ATPase) (arsenical resistance ATPase) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PAB3002 Preprotein translocase secE subunit (protein transport protein SEC61 gamma subunit homolog K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D PAB1441 pyk pyruvate kinase (EC 2.7.1.40) (PK) K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB0465 tuf; tuf translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha
C 04121 Ubiquitin system [BR:pab04121]
D PAB7211 rpl40E; rpl40E LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
C 03051 Proteasome [BR:pab03051]
D PAB0417 psmA; psmA proteasome, subunit alpha (EC 3.4.99.46) K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PAB1867 psmB-like proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PAB2199 psmB proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PAB2233 26S protease regulatory subunit 4 K03420 psmR; proteasome regulatory subunit
C 03032 DNA replication proteins [BR:pab03032]
D PAB1465 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PAB1877 fen1 FLAP endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PAB2002 lig DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D PAB2317 Citosine-specific modificatrion methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PAB7213 Small nucleolar ribonucleoprotein, trans-acting factor intervening in ribosome biogenesis K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D PAB0356 trub; truB tRNA pseudouridine synthase II K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D PAB0316 Primase dnaG-like K02316 dnaG; DNA primase [EC:2.7.7.101]
D PAB2265 Cdc6/orc1 cell division control protein 6 K10725 cdc6A; archaeal cell division control protein 6
D PAB2373 cdc21; MCM inteins containing helicase, minichromosome maintenance protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D PAB2236 DNA primase K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D PAB2235 Eukaryotic-type DNA primase, large subunit K18882 priL; DNA primase large subunit
D PAB1466 Hypothetical protein K09723 ginS; DNA replication factor GINS
D PAB0956 Hypothetical protein K09723 ginS; DNA replication factor GINS
D PAB0352 rnhB; rnhB ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PAB1128 polI; polI DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D PAB2404 dp2/polC intein containing DNA polymerase II large subunit (EC 2.7.7.7) K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
D PAB2266 dp1/polB intein containing DNA polymerase II small subunit (2.7.7.7) K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
D PAB0069 rfcL; rfcL activator 1, replication factor C, large subunit K04800 rfcL; replication factor C large subunit
D PAB0068 rfcS; rfcS intein containing activator 1, replication factor C, small subunit K04801 rfcS; replication factor C small subunit
D PAB2411 top6A; Top6A DNA topoisomerase VI, subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2]
D PAB0407 top6B; Top6B DNA topoisomerase VI, subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2]
D PAB1430 topA DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PAB2423 top-RG; top-RG reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:pab03036]
D PAB2317 Citosine-specific modificatrion methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PAB2119 Hypothetical protein K09142 SPOUT1; methyltransferase [EC:2.1.1.-]
D PAB3089 han1; han1 histone-like protein han1 subunit K24450 hmf; DNA-binding protein
D PAB3117 hpyA1-2; hpyA1-2 archaeal histone a1/a2 K24450 hmf; DNA-binding protein
D PAB2109 smc1 chromosome segregation protein K03529 smc; chromosome segregation protein
D PAB2110 Hypothetical protein K05896 scpA; segregation and condensation protein A
D PAB2162 Transcriptional regulator, putative (ypuH-like) K06024 scpB; segregation and condensation protein B
D PAB2351 ftsZ-1 cell division GTPase, ftsZ homolog K03531 ftsZ; cell division protein FtsZ
D PAB0851 ftsZ-2; ftsZ-2 cell division GTPase, ftsZ homolog K03531 ftsZ; cell division protein FtsZ
D PAB1983 minD-1 ATPase involved in chromosome partitioning, minD/MRP superfamily K03609 minD; septum site-determining protein MinD
D PAB0954 minD-2; minD-2 ATPase involved in chromosome partitioning, minD/MRP superfamily K03609 minD; septum site-determining protein MinD
D PAB0852 soj; ATPase involved in chromosome partitioning, minD/MRP superfamily K03496 parA; chromosome partitioning protein
D PAB0255 xerD-like; xerC/D integrase/recombinase protein K04763 xerD; integrase/recombinase XerD
D PAB0400 mrp-like; ATPase involved in chromosome partitioning, minD/MRP superfamily K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:pab03400]
D PAB0260 ogt; ogt 6-O-methylguanine-DNA methyltransferase (EC 2.1.1.63) K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PAB0459 nth; nth endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PAB1465 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PAB1877 fen1 FLAP endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PAB2002 lig DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D PAB2385 ERCC2/XPD/rad3 DNA repair helicase, TFIIH helicase beta subunit homolog K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PAB1968 ADP-ribose pyrophosphatase (nudix family) (EC 3.6.1.13) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PAB0474 Thermostable uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PAB1530 alkA 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PAB1103 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PAB0916 nfi; nfi endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D PAB0034 recJ-like; recJ-like single-stranded exonuclease recJ homolog K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PAB1307 mutS-like DNA mismatch recognition protein, muts2 homolog K07456 mutS2; DNA mismatch repair protein MutS2
D PAB0812 Rad50 purine ntpase K03546 sbcC; DNA repair protein SbcC/Rad50
D PAB0811 rad32; Rad32/mre11 DNA repair protein (EC 3.1.-.-) K03547 sbcD; DNA repair protein SbcD/Mre11
D PAB1002 Bacterial regulatory protein, Fis family, putative K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PAB0164 radA; radA DNA repair protein rad51 : DNA repair and recombination protein radA K04483 radA; DNA repair protein RadA
D PAB2270 radB DNA repair and recombination protein K04484 radB; DNA repair protein RadB
D PAB0552 Hjc holliday-junction resolvase K03552 hjr; holliday junction resolvase [EC:3.1.21.10]
D PAB0810 Predicted ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PAB0813 Putative 5' to 3'nuclease, nura homolog K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-]
D PAB0592 DNA helicase K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D PAB1430 topA DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PAB0744 lhr-2; lhr-2 large helicase-related protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PAB1817 lhr-1 large helicase-related protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PAB1057 nrd; nrd inteins containing ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAB2062 Hypothetical protein K22585 nreA; DNA repair protein NreA
C 03029 Mitochondrial biogenesis [BR:pab03029]
D PAB2126 RNAse P protein subunit P29/POP4 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D PAB0467 RNAse P subunit P14 ortholog K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D PAB1136 Ribonuclease P subunit rpp30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PAB1065 Hypothetical protein, possibly GTP-binding K03595 era; GTPase
D PAB1728 tyrS tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAB1782 leuS leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAB0380 glyS; glyS glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAB0469 argS; argS arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAB0400 mrp-like; ATPase involved in chromosome partitioning, minD/MRP superfamily K03593 mrp; ATP-binding protein involved in chromosome partitioning
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pab02000]
D PAB2147 ABC-type transport system, ATPase component, substrate unknown K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PAB2148 ABC-type transport system, ATPase component, substrate unknown K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PAB0101 ABC-type molybdate transport system protein, periplasmic component K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D PAB0102 Transport system permease protein, substrate unknown K15496 wtpB; molybdate/tungstate transport system permease protein
D PAB0103 ABC transporter, ATP-binding protein, substrate unknown K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D PAB1835 Thiamine-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein
D PAB0543 ABC transporter integral membrane protein K02063 thiP; thiamine transport system permease protein
D PAB0545 ABC-transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PAB0123 msmK; malK-2 ATP hydrolyzing subunit of the trehalose/maltose transport system K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAB2336 malK-1 ATP hydrolyzing subunit of the trehalose/maltose transport system K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAB0119 malE; malE maltose-binding periplasmic protein precursor (maltodextrin-binding protein) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PAB0120 malC; malF maltodextrin transport system permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAB0121 malG; malG maltose transport system permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAB2439 Extracellular solute binding protein, substrate unknown K17237 inoE; inositol-phosphate transport system substrate-binding protein
D PAB2230 Sugar transport binding protein dependent membrane protein (MALFG subfamily) K17238 inoF; inositol-phosphate transport system permease protein
D PAB2231 Sugar transport binding protein dependent protein (inner membrane) (MALFG subfamily) K17239 inoG; inositol-phosphate transport system permease protein
D PAB2232 Sugar transport, ABC transporter ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D PAB0302 tmpC-like; Membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PAB0304 rbsC-1; Putative ABC-type transport system, permease component K23535 nupB; general nucleoside transport system permease protein
D PAB0305 rbsC-2; ABC-type transport system, permease component K23536 nupC; general nucleoside transport system permease protein
D PAB0303 rbsA; ABC-type transport system, ATPase component, substrate unknown K23537 nupA; general nucleoside transport system ATP-binding protein
D PAB2333 Bacterial type extracellular binding protein, substrate unknown K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PAB2334 malF-like probable sugar ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D PAB2335 Sugar permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PAB2365 phoX; pstS phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PAB0698 pstC; pstC phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D PAB0699 pstA; pstA phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D PAB0700 pstB; pstB phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PAB1343 dppA-3 dipeptide transport protein precursor (dipeptide-binding protein) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB1871 ABC-type periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB0091 dppA-1; Bacterial extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB0627 appA; appA oligopeptide-binding protein appA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB1193 Hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAB1344 dppB-3 dipeptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB1872 dppB-2 dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB0092 dppB-1; Binding protein-dependent transport system, inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB0628 appB-2; appB-2 oligopeptide transport system permease protein appB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB1194 dppB-1 dipeptide transport system permease protein dppB or oligopeptide transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAB1345 dppC-3 ABC transporter, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB1873 dppC-2 dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB2363 appC-2; appC-2 oligopeptide transport integral membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB0093 dppC-1; Binding protein-dependent transport system, inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB1195 dppC-1 dipeptide transport system permease protein dppC or oligopeptide transport system permease protein oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAB1346 dppD-3 dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB1874 dppD-2 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB0094 dppD-1; ABC transporter, ATP-binding protein, substrate unknown K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB0630 appF-2; appF-2 oligopeptide transport ATP-binding protein appF K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB1196 dppD-1 dipeptide transport system ATP-binding protein dppD or dppF or oligopeptide transport system ATP-binding protein oppD or oppF K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAB1347 dppF-3 dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAB1875 dppF-2 dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAB0095 dppF-1; dppF-1 dipeptide ABC transporter, dipeptide-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAB0631 appF-3; appF-3 oligopeptide transport ATP-binding protein appF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAB1197 appF-1 dipeptide transport system ATP-binding protein dppF or oligopeptide transport system ATP-binding protein appF or oppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAB0676 hemv-3; hemV-3 iron (III) ABC transporter, ATP-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PAB0677 hemU-1; Ferrichrome transport system permease protein (ABC) K02015 ABC.FEV.P; iron complex transport system permease protein
D PAB0678 hemV-1; Iron transport ABC protein, ATP-binding K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAB0349 Iron (III) ABC transporter, periplasmic-binding protein, putative K25034 btuF; cobalamin transport system substrate-binding protein
D PAB1535 hemU iron (III) ABC transporter, permease protein K25027 btuC; cobalamin transport system permease protein
D PAB1536 hemV-2 iron (III) ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D PAB2248 bioY biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D PAB2261 Cobalt transport protein, cbiQ family K16785 ecfT; energy-coupling factor transport system permease protein
D PAB0249 ABC ABC-type transport system, ATPase component, substrate unknown K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PAB2260 ABC transporter, ATP-binding protein, substrate unknown K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PAB1356 Putative adhesion lipoprotein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PAB0351 ABC transporter, permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D PAB0350 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D PAB1669 Hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAB1844 Hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAB1848 Hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAB0435 natB-like ABC-type transport protein, Na+ efflux pump membrane component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAB2071 ABC type transporter permease component, substrate unknown K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAB1704 ABC-type transporter permease component, substrate unknown K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAB1924 ABC type transporter permease component, substrate unknown K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAB2069 ABC type transporter permease component, substrate unknown K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAB1668 ATP-binding transport protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAB1696 ABC transporter, ATP-binding protein, unknown substrate K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAB1703 ABC-type multidrug transporter, ATPase component, substrate unknown K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAB1845 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAB0434 natA-like ABC-type transport protein, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAB1923 ABC-type multidrug transporter, ATPase component, substrate unknown K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAB2068 ABC-type multidrug transporter, ATPase component, substrate unknown K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAB1855 ABC transporter, ATPase subunit K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PAB0243 dinF-like; Bacterial multidrug resistance related protein K26939 norM; MATE family, multidrug efflux pump
D PAB1439 Multi antimicrobial extrusion (MatE) protein K26937 dinF; MATE family, multidrug efflux pump
D PAB1438 Multi antimicrobial extrusion (MatE) protein K26937 dinF; MATE family, multidrug efflux pump
D PAB0883 mgtE-like; Divalent cation transporter K07244 K07244; mgtE-like transporter
D PAB1925 Chromosome condensation protein, crcB homolog K06199 crcB; fluoride exporter
D PAB1443 gufA protein homolog, putative heavy metal ion transport protein K07238 TC.ZIP; zinc transporter, ZIP family
D PAB0665 Hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D PAB1426 Membrane protein, putative K03298 TC.DME; drug/metabolite transporter, DME family
D PAB0285 Predicted permease K03298 TC.DME; drug/metabolite transporter, DME family
D PAB1029 Na+/Ca2+ exchange integral membrane protein K07301 yrbG; cation:H+ antiporter
D PAB1518 nhaP type Na+/H+ and K+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter
D PAB1247 napA-3 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D PAB0084 napA-1; napA-1 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D PAB0390 napA-2; napA-2 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D PAB0809 napA-4; napA-4 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D PAB0248 trkH; trkG/H trk potassium uptake system protein K03498 trkH; trk/ktr system potassium uptake protein
D PAB1178 trkA trk potassium uptake system protein K03499 trkA; trk/ktr system potassium uptake protein
D PAB1660 Membrane protein, xanthine/uracil permease family K06901 pbuG; adenine/guanine/hypoxanthine permease
D PAB2010 eriC voltage gated chloride channel K03281 clcA; chloride channel protein, CIC family
D PAB1555 arsA putative arsenical pump-driving ATPase (arsenite-translocating ATPase) (arsenical resistance ATPase) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PAB2415 Multisubunit Na+/H+ antiporter, putative MnhB subunit K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PAB1399 Multisubunit Na+/H+ antiporter,putative MnhB subunit K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PAB1886 Conserved hypothetical protein (C-terminal fragment) K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PAB0805 Multisubunit Na+/H+ antiporter MnhB subunit, putative K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PAB0804 Multisubunit Na+/H+ antiporter MnhB subunit, putative K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PAB1400 Putative integral membrane protein, DUF67 family K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D PAB1887 Hypothetical protein, potential integral membrane protein DUF67 family K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D PAB0488 Multisubunit Na+/H+ antiporter, putative K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D PAB7306 Hypothetical protein K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D PAB1888 NADH ubiquinone oxidoreductase subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PAB1402 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PAB0806 NADH ubiquinone oxidoreductase chain 4 related (EC 1.6.5.3) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PAB0485 Multisubunit Na+/H+ antiporter, putative K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D PAB1401 Putative integral membrane protein, DUF68 family K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D PAB1884 Hypothetical protein, potential transmembrane protein DUF68 family K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D PAB0802 Multisubunit Na+/H+ antiporter, putative K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D PAB3171 Multisubunit Na+/H+ antiporter, putative MnhF subunit K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D PAB3177 Multiple resistance and pH regulation protein F (mrpF / phaF) K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D PAB3299 Multiple resistance and pH regulation protein F (mrpF / PhaF) K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D PABs8723 Na+/H+ antiporter MnhF subunit, putative K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D PAB0486 Multisubunit Na+/H+ antiporter, putative K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D PAB1398 Na+/H+ antiporter subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D PAB1885 Na+/H+ antiporter subunit, phaG_mnhG_yufB family K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D PAB0803 Multisubunit Na+/H+ antiporter, putative K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D PAB1273 Membrane protein, putative K22736 VIT; vacuolar iron transporter family protein
D PAB0863 Multiple antibiotic resistance protein related, MarC family K05595 marC; multiple antibiotic resistance protein
D PAB2220 Multiple antibiotic resistance (Mar)-related protein K05595 marC; multiple antibiotic resistance protein
D PAB1772 mmdB methylmalonyl-coA decarboxylase, beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PAB1769 mmdA methylmalonyl-coA decarboxylase, alpha chain K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D PAB1771 mmdC methylmalonyl-coA decarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PAB1770 mmdD-like methylmalonyl coA decarboxylase,delta chain, putative K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PAB3260 Fe2+ transport protein, putative K04758 feoA; ferrous iron transport protein A
D PAB0708 feoB; feoB ferrous iron transport protein B homolog GTP-binding K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:pab02044]
D PAB1378 flaB1-3 flagellin B2 precursor, putative K07325 flaB; archaeal flagellin FlaB
D PAB1379 flaB1-2 flagellin B4 precursor K07325 flaB; archaeal flagellin FlaB
D PAB1380 flaB1-1 flagellin B5 precursor K07325 flaB; archaeal flagellin FlaB
D PAB1381 flaC flagella-related protein C K07822 flaC; archaeal flagellar protein FlaC
D PAB1382 flaD/E flagella-related protein D or E K07327 flaD; archaeal flagellar protein FlaD
D PAB1383 flaF flagella-related protein F K07329 flaF; archaeal flagellar protein FlaF
D PAB1384 flaG flagella-related protein G K07330 flaG; archaeal flagellar protein FlaG
D PAB1385 flaH flagella-related protein H K07331 flaH; archaeal flagellar protein FlaH
D PAB1386 flaI flagella-related protein I K07332 flaI; archaeal flagellar protein FlaI
D PAB1457 Intein containing bacterial type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI
D PAB1387 flaJ flagella-related protein J K07333 flaJ; archaeal flagellar protein FlaJ
D PAB1458 Hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ
D PAB1309 flaK flagella-related protein K K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D PAB1975 dCMP deaminase, putative K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PAB1177 secD protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D PAB1176 secF-like protein-export membrane related protein K03074 secF; preprotein translocase subunit SecF
D PAB2166 Hypothetical protein K22228 secG; preprotein translocase subunit SecG
D PAB2139 secY protein translocase subunit K03076 secY; preprotein translocase subunit SecY
D PAB0320 srp54; srp54 signal recognition particle, subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PAB2025 GTP-binding signal recognition particle receptor (SRP alpha, SRP54) K03110 ftsY; fused signal recognition particle receptor
D PAB3002 Preprotein translocase secE subunit (protein transport protein SEC61 gamma subunit homolog K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D PAB2061 srp19 signal recognition particle, subunit SRP19, putative K03105 SRP19; signal recognition particle subunit SRP19
C 02042 Bacterial toxins
C 02022 Two-component system [BR:pab02022]
D PAB1332 cheA chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PAB1330 cheY chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAB1331 cheB protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C 02035 Bacterial motility proteins [BR:pab02035]
D PAB1332 cheA chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PAB1027 cheW; cheW purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PAB1333 cheC-2 chemotaxis protein cheC K03410 cheC; chemotaxis protein CheC
D PAB1334 cheC-1 chemotaxis protein cheC K03410 cheC; chemotaxis protein CheC
D PAB1335 cheD chemotaxis protein cheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D PAB1329 cheR chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PAB1331 cheB protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PAB1330 cheY chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAB1026 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB1336 Methyl accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB1308 Methyl-accepting chemotaxis related protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB2066 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAB1378 flaB1-3 flagellin B2 precursor, putative K07325 flaB; archaeal flagellin FlaB
D PAB1379 flaB1-2 flagellin B4 precursor K07325 flaB; archaeal flagellin FlaB
D PAB1380 flaB1-1 flagellin B5 precursor K07325 flaB; archaeal flagellin FlaB
D PAB1381 flaC flagella-related protein C K07822 flaC; archaeal flagellar protein FlaC
D PAB1382 flaD/E flagella-related protein D or E K07327 flaD; archaeal flagellar protein FlaD
D PAB1383 flaF flagella-related protein F K07329 flaF; archaeal flagellar protein FlaF
D PAB1384 flaG flagella-related protein G K07330 flaG; archaeal flagellar protein FlaG
D PAB1385 flaH flagella-related protein H K07331 flaH; archaeal flagellar protein FlaH
D PAB1386 flaI flagella-related protein I K07332 flaI; archaeal flagellar protein FlaI
D PAB1457 Intein containing bacterial type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI
D PAB1387 flaJ flagella-related protein J K07333 flaJ; archaeal flagellar protein FlaJ
D PAB1458 Hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ
D PAB1309 flaK flagella-related protein K K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pab04812]
D PAB0370 Predicted dioxygenase K06990 MEMO1; MEMO1 family protein
D PAB2351 ftsZ-1 cell division GTPase, ftsZ homolog K03531 ftsZ; cell division protein FtsZ
D PAB0851 ftsZ-2; ftsZ-2 cell division GTPase, ftsZ homolog K03531 ftsZ; cell division protein FtsZ
D PAB1820 ftsZ-3 cell division GTPase, ftsZ homolog K22222 cetZ; tubulin-like protein CetZ
D PAB1983 minD-1 ATPase involved in chromosome partitioning, minD/MRP superfamily K03609 minD; septum site-determining protein MinD
D PAB0954 minD-2; minD-2 ATPase involved in chromosome partitioning, minD/MRP superfamily K03609 minD; septum site-determining protein MinD
D PAB0852 soj; ATPase involved in chromosome partitioning, minD/MRP superfamily K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:pab04147]
D PAB1126 eno; eno enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) (EC 4.2.1.11) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB0367 eno-like; eno-like enolase related K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAB1679 pgk 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PAB1441 pyk pyruvate kinase (EC 2.7.1.40) (PK) K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAB1673 Peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PAB0465 tuf; tuf translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha
D PAB0187 fus; fus translation elongation factor EF-2 K03234 EEF2; elongation factor 2
D PAB1877 fen1 FLAP endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PAB1250 guaB inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD) K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAB2086 Cdc48 cell division control protein 48, AAA family K13525 VCP; transitional endoplasmic reticulum ATPase
D PAB1478 ATPase of the AAA+ family K13525 VCP; transitional endoplasmic reticulum ATPase
D PAB0907 acaB; Acetyl coA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAB1372 ahcY adenosylhomocysteinase (EC 3.3.1.1) K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PAB2140 adkA archaeal adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAB0739 adkE; adkE adenylate kinase (adk) (EC 2.7.4.3) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAB2406 glpk; glpK glycerol kinase (EC 2.7.1.30) K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PAB1292 glnA glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAB2366 phoA; phoA alkaline phosphatase IV precursor (EC 3.1.3.1) (APASE IV) K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PAB0514 serA-like; serA D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAB0555 Heat shock protein/Zn-dependent protease with chaperone function, family M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D PAB0391 gdh; gdh glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PAB1208 tpiA triosephosphate isomerase, archaeal triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:pab02048]
D PAB1689 DEAD-box/DEAH box helicase superfamily protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D PAB1690 Metal dependent phosphohydrolase, HD domain K07475 cas3; CRISPR-associated endonuclease Cas3-HD [EC:3.1.-.-]
D PAB1686 Hypothetical protein K19074 csa2; CRISPR-associated protein Csa2
D PAB1691 Hypothetical protein K07725 csa3; CRISPR-associated protein Csa3
D PAB2143 Hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D PAB1687 Hypothetical protein K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c
D PAB1064 Hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D PAB1613 Hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D PAB2154 hsdR type I restriction-modification enzyme, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PAB2150 hsdS type I restriction-modification enzyme, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D PAB2149 hsdM type I restriction modification enzyme, subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PAB2246 Site specific DNA-methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PAB2317 Citosine-specific modificatrion methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PAB2351 ftsZ-1 cell division GTPase, ftsZ homolog K03531 ftsZ; cell division protein FtsZ
D PAB0851 ftsZ-2; ftsZ-2 cell division GTPase, ftsZ homolog K03531 ftsZ; cell division protein FtsZ
D PAB0323 gltX; gltX glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAB0882 Conserved hypothetical protein K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pab00537]
D PAB2366 phoA; phoA alkaline phosphatase IV precursor (EC 3.1.3.1) (APASE IV) K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pab03100]
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Tyr tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D 16S_rRNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 5S_rRNA-1 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 7S_rRNA 7S ribosomal RNA K01983 ffs; SRP RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PAB0775 NADH dependent dehydrogenase homolog K18855 E1.1.1.374; UDP-N-acetylglucosamine 3-dehydrogenase [EC:1.1.1.374]
D PAB0718 iorA-2; iorA-like indolepyruvate ferredoxin oxidoreductase related protein, alpha and beta subunits K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D PAB0855 iorA-1; iorA indolepyruvate ferredoxin oxidoreductase, subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D PAB0143 iorB-2; iorB-like indolepyruvate ferredoxin oxidoreductase related protein K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D PAB0857 iorB-1; iorB indolepyruvate ferredoxin oxidoreductase, subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D PAB1931 noxA-2 NADH oxidase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3]
D PAB0936 noxA-1; noxA-1 NADH oxidase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D PAB1738 gltB-1 glutamate synthase small chain K20202 sudA; sulfide dehydrogenase subunit alpha [EC:1.8.1.19]
D PAB1737 Oxidoreductase, substrate unknown, carrying the FAD binding domain K20203 sudB; sulfide dehydrogenase subunit beta [EC:1.8.1.19]
D PAB1892 cooH-like CO-induced hydrogenase K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2]
D PAB1891 NADH dehydrogenase, 30 kD subunit K18017 mbhK; membrane-bound hydrogenase subunit beta [EC:1.12.7.2]
D PAB1890 NADH ubiquinone oxidoreductase subunit K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D PAB0599 sor superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2]
D PAB1213 hydG-like hydrogenase, gamma chain K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PAB1899 moaA-like intein containing molybdenum cofactor biosynthesis moaA homolog K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D PAB1859 act-like pyruvate formate-lyase activating enzyme related protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PAB2338 Anaerobic ribonucleotide triphosphate reductase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PAB0742 pflX; pflX pyruvate formate-lyase activating enzyme K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PAB1392 Hydrogenase 4, component B or formate hydrogen lyase, subunit 3 K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D PAB1391 NADH ubiquinone oxidoreductase K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D PAB1206 pcm L-isoaspartyl protein carboxyl methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PAB1501 dph5 diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98]
D PAB1612 Putative carbamoyl transferase, nodU family K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D PAB1210 Probable glycosyltransferase K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268]
D PAB0511 dys1; dhs deoxyhypusine synthase (EC 2.5.1.46) K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D PAB0872 Predicted methyltransferase, DUF43 family K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128]
D PAB0082 Queuine tRNA-ribosyltransferase K07557 tgtA2; archaeosine synthase alpha-subunit [EC:2.6.1.97 2.6.1.-]
D PAB0194 Predicted Fe-S oxidoreductase K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-]
D PAB2253 2-phosphoglycerate kinase, containing ATP cone domain K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16]
D PAB1730 Hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D PAB1041 pgsA-like; Putative CDP-alcohol phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39]
D PAB1965 Hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D PAB0707 tatD related DNAse K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PAB0704 Thermonuclease precursor K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D PAB2263 Hypothetical protein, DUF91 family K07503 nucS; endonuclease [EC:3.1.-.-]
D PAB0090 ndaD; ndaD D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D PAB1341 Hypothetical protein K22408 dac; N,N'-diacetylchitobiose non-reducing end deacetylase [EC:3.5.1.136]
D PAB0825 Translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PAB0848 moxR-3; moxR-3 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PAB1296 moxR-2 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PAB1276 moxR-1 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PAB1317 Hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D PAB1144 Hypothetical protein, YjeF-related K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PAB1695 Hypothetical protein K01741 E4.2.99.18; DNA-(apurinic or apyrimidinic site) lyase [EC:4.2.99.18]
D PAB1943 rtcA probable RNA 3'-terminal phosphate cyclase (EC 6.5.1.4) (RNA-3'-phosphate cyclase) (RNA cyclase) K18105 rtcA; RNA 3'-terminal phosphate cyclase (GTP) [EC:6.5.1.5]
D PAB2252 Cyclic 2,3-diphosphoglycerate synthase K05716 CPGS; cyclic 2,3-diphosphoglycerate synthase [EC:6.5.1.9]
D PAB1020 Hypothetical protein K07468 K07468; DNA/RNA ligase [EC:6.5.1.-]
D PAB0626 cS; Zinc-transporting ATPase (translocating P-type) (EC 3.6.3.5) K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D PAB7439 fdxA ferredoxin K05337 fer; ferredoxin
D PAB1395 Formate hydrogen lyase subunit 6 (hydrogenase 3 component F) K12143 hyfH; hydrogenase-4 component H
D PAB1393 Hydrogenase 4, component C or formate hydrogen lyase, subunit 4 K15829 hycD; formate hydrogenlyase subunit 4
D PAB1893 NADH dehydrogenase subunit K15829 hycD; formate hydrogenlyase subunit 4
D PAB1894 cooX-like CO-induced hydrogenase related, subunit X K15831 hycF; formate hydrogenlyase subunit 6
D PABs4324 Conserved hypothetical protein K14113 ehbD; energy-converting hydrogenase B subunit D
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D PAB0826 Integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
D PAB1174 Integral membrane protein, putative K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D PAB2288 mobB-like molybdopterin-guanine dinucleotide biosynthesis protein B related K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PAB0842 DNA binding helix-turn helix protein K03627 MBF1; putative transcription factor
D PAB7094 Conserved hypothetical protein, DUF78 family K03622 ssh10b; archaea-specific DNA-binding protein
D PAB8160 snrnp; Heptameric Sm/Lsm protein K04796 RUXX; small nuclear ribonucleoprotein
D PAB3329 Hypothetical protein K07743 K07743; transcriptional regulator
D PAB2181 Hypothetical protein K07745 K07745; transcriptional regulator
C 99974 Translation
D PAB0252 Predicted RNA-binding protein K07572 K07572; putative nucleotide binding protein
D PAB1205 Methyltransferase related protein K07579 K07579; putative methylase
D PABs13722 Predicted Zn-ribbon RNA-binding protein involved in translation K07580 K07580; Zn-ribbon RNA-binding protein
D PAB1135 Hypothetical protein K07581 K07581; RNA-binding protein
D PAB0172 Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase K07585 K07585; tRNA methyltransferase
C 99975 Protein processing
D PAB7315 hypC hydrogenase expression/formation protein K04653 hypC; hydrogenase expression/formation protein HypC
D PAB1559 hypD hydrogenase expression/formation protein K04654 hypD; hydrogenase expression/formation protein HypD
D PAB0868 hypE; hypE hydrogenase expression/formation protein K04655 hypE; hydrogenase expression/formation protein HypE
D PAB0403 hypE-like; hypE-like hydrogenase expression/formation related protein K04655 hypE; hydrogenase expression/formation protein HypE
D PAB1560 hypF hydrogenase expression/formation regulatory protein K04656 hypF; hydrogenase maturation protein HypF
D PAB1905 Hypothetical protein K07397 yhfA; putative redox protein
D PAB1932 nfeD nodulation protein homolog, probable membrane protein K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D PAB0588 Predicted DNA methylase K07445 K07445; putative DNA methylase
D PAB2076 Resolvase related protein K07450 K07450; putative resolvase
D PAB1284 recJ-like phosphoesterase, containing RNA binding S1 and OB-fold nucleic acid binding domain K07463 K07463; archaea-specific RecJ-like exonuclease
D PAB2107 TBP-interacting protein, TIP49 homolog K07472 TIP49; TBP-interacting protein
D PAB2425 Translin homolog, putative K07477 K07477; translin
D PAB1251 Intein containing hypothetical protein K07500 K07500; DNA endonuclease
D PAB1452 Transposon ISC1913 related orf K07496 K07496; putative transposase
D PAB2077 Transposon ISC1913 related orf K07496 K07496; putative transposase
D PAB1802 Transposon ISC1904 linked orf, putative transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D PAB0064 Hypothetical protein K07504 K07504; predicted type IV restriction endonuclease
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PAB0927 pitA-2 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PAB1652 pitA-1 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PAB2354 putP-3; Proline or pantothenate permease K03307 TC.SSS; solute:Na+ symporter, SSS family
D PAB1841 Proline or pantothenate permease K03307 TC.SSS; solute:Na+ symporter, SSS family
D PAB0609 putP-1; Proline or pantothenate permease K03307 TC.SSS; solute:Na+ symporter, SSS family
D PAB1527 Probable Na+/alanine transport protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D PAB0377 spoIIM-like; spoIIM-like stage II sporulation protein M related K06384 spoIIM; stage II sporulation protein M
C 99993 Cell motility
D PAB1338 Hypothetical protein K09156 cheF; taxis protein CheF
C 99995 Signaling proteins
D PAB1554 cstA carbon starvation protein A K06200 cstA; carbon starvation protein
D PAB0564 Predicted protein kinase, putative K07176 K07176; putative serine/threonine protein kinase
D PAB0620 Hypothetical protein K06875 PDCD5; programmed cell death protein 5
C 99992 Structural proteins
C 99994 Others
D PAB0701 phoU-like phosphate ABC transporter, regulatory protein K02039 phoU; phosphate transport system protein
D PAB0702 phoU; phoU phosphate ABC transporter, regulatory protein K02039 phoU; phosphate transport system protein
D PAB1717 C type cytochrome biogenesis protein cycY K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PAB0560 Putative phosphotransferase, php family K04477 ycdX; putative hydrolase
D PAB1633 Hypothetical protein, containing KH nucleic acid binding domain K06865 K06865; ATPase
D PAB1684 Hypothetical protein, containing ZPR1 zinc-finger domain K06874 K06874; zinc finger protein
D PAB1722 DEAD/DEAH box RNA helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D PAB0278 RNA binding protein, emap domain K06878 K06878; tRNA-binding protein
D PAB1224 Hydrolase, HAD family K07025 K07025; putative hydrolase of the HAD superfamily
D PAB1576 Haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PAB2019 Haloacid dehalogenase-like hydrolase, putative K07025 K07025; putative hydrolase of the HAD superfamily
D PAB2197 Haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PAB0131 Predicted membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D PAB1699 Hypothetical protein, containing metalloenzyme DUF136 domain K07049 K07049; TatD-related deoxyribonuclease
D PAB1540 Hypothetical protein, containing potential zinc-binding domain K07143 K07143; UPF0148 protein
D PAB0115 Integral membrane protein unknown function K08971 K08971; putative membrane protein
D PAB1241 Hypothetical protein, containing archaeal domain of unknown function DUF373 K08975 K08975; putative membrane protein
C 99997 Function unknown
D PAB0075 Archaebacterial protein, unknown function. DUF75 family K06869 K06869; uncharacterized protein
D PAB0498 Archaeal serine protease, putative K06870 K06870; uncharacterized protein
D PAB2116 metal-dependent phosphohydrolase, puative, containing HD region K06885 K06885; uncharacterized protein
D PAB0571 Hypothetical protein, containing DUF238 and DUF234 domains K06921 K06921; uncharacterized protein
D PAB0634 Archaeal ATPase K06921 K06921; uncharacterized protein
D PAB0664 Hypothetical protein, contains DUF238 domain K06921 K06921; uncharacterized protein
D PAB0800 ATP-binding protein, putative K06921 K06921; uncharacterized protein
D PAB0862 Hypothetical protein, containing DUF238 domain K06921 K06921; uncharacterized protein
D PAB1359 Hypothetical protein, containing ATP/GTP-binding site motif A K06921 K06921; uncharacterized protein
D PAB1370 Hypothetical protein, containing ATP/GTP-binding site motif A K06921 K06921; uncharacterized protein
D PAB1371 Hypothetical protein, containing ATP/GTP-binding site motif A K06921 K06921; uncharacterized protein
D PAB1412 Hypothetical protein K06921 K06921; uncharacterized protein
D PAB1413 Hypothetical protein K06921 K06921; uncharacterized protein
D PAB1516 Hypothetical protein, containing DUF238 and DUF234 domains K06921 K06921; uncharacterized protein
D PAB1582 Hypothetical protein, containing DUF238 and DUF234 domains K06921 K06921; uncharacterized protein
D PAB1597 Hypothetical protein, containing ATP/GTP-binding site motif A K06921 K06921; uncharacterized protein
D PAB1598 Hypothetical protein, containing DUF238 and DUF234 domains K06921 K06921; uncharacterized protein
D PAB1618 ATPase of the AAA superfamily, putative K06921 K06921; uncharacterized protein
D PAB1619 Hypothetical protein, containing ATP/GTP-binding site motif A K06921 K06921; uncharacterized protein
D PAB1620 Hypothetical protein, containing DUF238 and DUF234 domains K06921 K06921; uncharacterized protein
D PAB1945 Archaeal ATPase K06921 K06921; uncharacterized protein
D PAB1954 Hypothetical protein, containing ATP/GTP-binding site motif A K06921 K06921; uncharacterized protein
D PAB2152 Hypothetical protein, containing ATP/GTP-binding site motif A K06921 K06921; uncharacterized protein
D PAB2304 Hypothetical protein, containing ATP/GTP-binding site motif A K06921 K06921; uncharacterized protein
D PAB2383 Hypothetical protein, containing DUF238 and DUF234 domains K06921 K06921; uncharacterized protein
D PAB0589 Hypothetical protein K06922 K06922; uncharacterized protein
D PAB1624 Hypothetical protein K06929 K06929; uncharacterized protein
D PAB1543 Hypothetical protein K06933 K06933; uncharacterized protein
D PAB0835 DNA-binding protein, putative K06934 K06934; uncharacterized protein
D PAB1998 mooA-like molybdenum cofactor biosynthesis protein A related K06935 K06935; uncharacterized protein
D PAB0321 Predicted Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein
D PAB2060 Hypothetical protein, containing a putative zinc binding site K06940 K06940; uncharacterized protein
D PAB1118 hydrolase, containing HD domain, putative K06950 K06950; uncharacterized protein
D PAB0562 Phosphoesterase, putative K06953 K06953; uncharacterized protein
D PAB0926 Dexonuclease sbcD related protein K06953 K06953; uncharacterized protein
D PAB1665 Membrane protein, BtpA family K06971 K06971; uncharacterized protein
D PAB1736 Predicted archaeal methyltransferase K06983 K06983; uncharacterized protein
D PAB1163 Hypothetical protein K06986 K06986; uncharacterized protein
D PAB1101 Hypothetical membrane protein K07003 K07003; uncharacterized protein
D PAB0737 Hypothetical protein, containing vinyl 4 reductase domain K07013 K07013; uncharacterized protein
D PAB1721 Hypothetical protein K07022 K07022; uncharacterized protein
D PAB1868 Cleavage and polyadenylation specficity factor K07041 K07041; uncharacterized protein
D PAB0058 Putative deoxyribonuclease TatD, related K07045 K07045; uncharacterized protein
D PAB2325 Hypothetical protein K07063 K07063; uncharacterized protein
D PAB2271 Hypothetical protein K07064 K07064; uncharacterized protein
D PAB1216 Hypothetical protein, contains PIN domain K07064 K07064; uncharacterized protein
D PAB1672 Predicted nucleic acid-binding protein, contains PIN domain K07064 K07064; uncharacterized protein
D PAB0520 Hypothetical protein K07064 K07064; uncharacterized protein
D PAB0788 Predicted nucleic acid-binding protein, contains PIN domain K07064 K07064; uncharacterized protein
D PAB7218 Hypothetical protein, containing PIN domain K07064 K07064; uncharacterized protein
D PAB0550 Predicted nucleic acid-binding protein, contains PIN domain K07064 K07064; uncharacterized protein
D PAB0859 Hypothetical protein, containing PIN domain K07064 K07064; uncharacterized protein
D PAB0786 Predicted nucleic acid-binding protein, contains PIN domain K07065 K07065; uncharacterized protein
D PAB1599 Predicted nucleic acid-binding protein, contains PIN domain K07065 K07065; uncharacterized protein
D PAB0908 acaC; Predicted nucleic-acid-binding protein containing a Zn-ribbon K07068 K07068; uncharacterized protein
D PAB0004 Hypothetical protein K07073 K07073; uncharacterized protein
D PAB1697 Hypothetical protein, containing aldo/keto reductase family signature K07087 K07087; uncharacterized protein
D PAB0782 Predicted permease K07090 K07090; uncharacterized protein
D PAB1010 Predicted permease K07090 K07090; uncharacterized protein
D PAB0209 Uncharacterized phosphoesterase K07095 K07095; uncharacterized protein
D PAB1944 Phosphoesterase, putative K07095 K07095; uncharacterized protein
D PAB1249 Serine/threonine-specific protein phosphatase, putative K07096 K07096; uncharacterized protein
D PAB0060 Hypoxanthine guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D PAB2405 gptA; gptA purine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D PAB1089 Hypothetical protein K07103 K07103; uncharacterized protein
D PAB2435 Regulator of amino acid metabolism, putative, containing act domain K07103 K07103; uncharacterized protein
D PAB0668 Hypothetical protein K07108 K07108; uncharacterized protein
D PAB0328 Short chain dehydrogenase, substrate unknown K07124 K07124; uncharacterized protein
D PAB1929 ABC transporter, ATP-binding protein, putative K07128 K07128; uncharacterized protein
D PAB0713 Pyruvate formate-lyase activating enzyme related protein K07129 K07129; uncharacterized protein
D PAB0083 ATPase of the AAA superfamily K07133 K07133; uncharacterized protein
D PAB0600 Hypothetical protein K07133 K07133; uncharacterized protein
D PAB0633 Putative ATPase of the AAA superfamily K07133 K07133; uncharacterized protein
D PAB1355 Hypothetical protein, contains ATP/GTP-binding site K07133 K07133; uncharacterized protein
D PAB1420 Hypothetical protein, containing ATP/GTP-binding site motif A K07133 K07133; uncharacterized protein
D PAB1562 Hypothetical protein, containing ATP/GTP-binding site motif A K07133 K07133; uncharacterized protein
D PAB1127 Hypothetical protein K07134 K07134; uncharacterized protein
D PAB1368 Hypothetical protein K07135 K07135; uncharacterized protein
D PAB1091 Hypothetical protein, containing NAD binding site K07137 K07137; uncharacterized protein
D PAB2042 Hypothetical protein, containing PIN domain K07158 K07158; uncharacterized protein
D PAB0569 Archaebacterial protein, unknown function. DUF75 family K07159 K07159; uncharacterized protein
D PAB1513 Hypothetical protein K09003 K09003; uncharacterized protein
D PAB0743 Hypothetical protein K09005 K09005; uncharacterized protein
D PAB2291 Hypothetical protein K09120 K09120; uncharacterized protein
D PAB1509 Hypothetical protein K09122 K09122; uncharacterized protein
D PAB1234 Hypothetical protein K09129 K09129; uncharacterized protein
D PAB1806 Hypothetical protein K09130 K09130; uncharacterized protein
D PAB7122 Hypothetical protein K09131 K09131; uncharacterized protein
D PAB2344 Hypothetical protein K09133 K09133; uncharacterized protein
D PAB0076 Hypothetical protein K09135 K09135; uncharacterized protein
D PAB1926 Hypothetical protein K09137 K09137; uncharacterized protein
D PAB1928 Hypothetical protein K09138 K09138; uncharacterized protein
D PAB0138 Hypothetical protein K09139 K09139; uncharacterized protein
D PAB0006 Hypothetical protein K09141 K09141; uncharacterized protein
D PAB0381 Hypothetical protein K09145 K09145; uncharacterized protein
D PAB1715 Hypothetical protein K09148 K09148; uncharacterized protein
D PAB1280 Hypothetical protein K09149 K09149; uncharacterized protein
D PAB1429 Hypothetical protein K09150 K09150; uncharacterized protein
D PAB2117 Hypothetical protein K09152 K09152; uncharacterized protein
D PAB1814 Hypothetical protein K09154 K09154; uncharacterized protein
D PAB1709 Hypothetical protein K09155 K09155; uncharacterized protein
D PAB2224 Hypothetical protein K09713 K09713; uncharacterized protein
D PAB3259 Hypothetical protein K09715 K09715; uncharacterized protein
D PAB0502 Hypothetical protein K09719 K09719; uncharacterized protein
D PAB1112 Hypothetical protein K09721 K09721; uncharacterized protein
D PAB2412 Hypothetical protein K09724 K09724; uncharacterized protein
D PAB0965 Hypothetical protein K09725 K09725; uncharacterized protein
D PAB2000 Hypothetical protein K09726 K09726; uncharacterized protein
D PAB1994 Hypothetical protein K09727 K09727; uncharacterized protein
D PAB1803 Hypothetical protein K09728 K09728; uncharacterized protein
D PAB0178 Conserved archaebacterial protein K09729 K09729; uncharacterized protein
D PAB1908 Conserved hypothetical protein K09730 K09730; uncharacterized protein
D PAB1804 Hypothetical protein K09731 K09731; uncharacterized protein
D PAB1228 Hypothetical protein K09732 K09732; uncharacterized protein
D PAB0654 Hypothetical protein, DUF54 family K09736 K09736; uncharacterized protein
D PAB1291 Hypothetical protein K09737 K09737; uncharacterized protein
D PAB0623 Hypothetical protein K09738 K09738; uncharacterized protein
D PAB2315 Hypothetical protein K09742 K09742; uncharacterized protein
D PAB1046 Uncharacterized ArCR K09744 K09744; uncharacterized protein
D PAB1376 Hypothetical protein K09745 K09745; uncharacterized protein
D PAB2165 RPA32 subunit of the hetero-oligomeric complex involved in homologous recombination K09746 K09746; uncharacterized protein
D PAB0513 Phosphate transport regulator, putative K07220 K07220; uncharacterized protein
D PAB0929 Phosphate transport regulator, putative K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 9, 2024