+E Transcription factors KO #

  Transcription Factors - Pseudomonas aeruginosa PAO1

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D PA4120 transcriptional regulator K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D PA0416 chpD; transcriptional regulator K06599 chpD; AraC family transcriptional regulator, chemosensory pili system protein ChpD D PA4227 pchR; transcriptional regulator PchR K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D PA0248 transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D PA0564 transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D PA2332 transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D PA1713 exsA; exoenzyme S transcriptional regulator ExsA K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D PA3898 transcriptional regulator K07506 K07506; AraC family transcriptional regulator D PA2696 transcriptional regulator K07506 K07506; AraC family transcriptional regulator D PA3596 methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D PA2118 ada; O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D PA5389 cdhR; CdhR family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator D PA0893 argR; transcriptional regulator ArgR K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator D PA5380 gbdR; protein GbdR K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D PA4184 transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator C LysR family D PA3845 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PA1184 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PA0784 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PA2383 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PA4914 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PA5293 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PA0152 pcaQ; transcriptional regulator PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D PA3587 metR; transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D PA5344 oxyR; transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D PA4363 iciA; chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PA2054 cynR; DNA-binding transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D PA1754 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D PA0217 transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D PA2921 transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D PA1998 dhcR; transcriptional regulator DhcR K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D PA4109 ampR; transcriptional regulator AmpR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D PA2492 mexT; transcriptional regulator MexT K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D PA2056 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D PA1003 mvfR; transcriptional regulator MvfR K19735 mvfR; LysR family transcriptional regulator, quorum-sensing system regulator MvfR D PA5428 transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D PA0133 HTH-type transcriptional activator BauR K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D PA5437 transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator D PA2510 catR; transcriptional regulator CatR K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D PA1853 transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D PA0037 trpI; HTH-type transcriptional regulator TrpI K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator C DeoR family D PA3583 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D PA1490 transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family D PA1949 rbsR; ribose operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PA2259 ptxS; transcriptional regulator PtxS K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D PA3563 fruR; FruR family transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D PA2320 gntR; GntR family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor C GntR family D PA3381 transcriptional regulator K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D PA5105 hutC; histidine utilization repressor HutC K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D PA3757 transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D PA2299 transcriptional regulator K03710 K03710; GntR family transcriptional regulator D PA4769 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PA0120 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PA5356 glcC; DNA-binding transcriptional regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D PA0268 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PA5431 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PA4165 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PA4906 transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator C TetR/AcrR family D PA5374 betI; BetI family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D PA0167 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PA0436 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PA1504 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PA1864 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PA2196 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PA0839 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PA1241 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PA2766 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PA4831 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PA3678 transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D PA2020 transcriptional regulator K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor D PA3721 nalC; transcriptional regulator K18130 nalC; TetR/AcrR family transcriptional regulator, transcriptional repressor NalC D PA3574 nalD; transcriptional regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon D PA4600 nfxB; transcriptional regulator NfxB K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D PA4890 desT; transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D PA2885 atuR; atu genes repressor K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator C Lrp/AsnC family D PA2577 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PA5308 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PA3965 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PA4508 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PA4784 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PA2246 bkdR; Bkd operon transcriptional regulator BkdR K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PA2028 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator C LuxR family D PA1430 lasR; transcriptional regulator LasR K18304 lasR; LuxR family transcriptional regulator, quorum-sensing system regulator LasR D PA3477 rhlR; transcriptional regulator RhlR K18099 rhlR; LuxR family transcriptional regulator, quorum-sensing system regulator RhlR D PA1136 transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1 D PA1759 transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D PA3921 transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein C MarR family D PA0253 transcriptional regulator K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR D PA3341 transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D PA0424 mexR; multidrug resistance operon repressor MexR K18131 mexR; MarR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon D PA1603 transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D PA2849 ohrR; transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D PA2825 ospR; transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D PA4778 cueR; protein CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D PA2273 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D PA4659 transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D PA4764 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PA2384 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PA5499 np20; transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D PA0236 transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D PA0155 pcaR; transcriptional regulator PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein C CRP/FNR family D PA0652 vfr; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PA0275 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PA1544 anr; transcriptional regulator Anr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D PA0527 dnr; transcriptional regulator Dnr K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator C Rrf2 family D PA3815 iscR; HTH-type transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor C ArsR family D PA2277 arsR; ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor C XRE family C PadR family C Other families D PA5438 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D PA3184 HTH-type transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D PA4280 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PA4853 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PA1097 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D PA4147 acoR; transcriptional regulator AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D PA4021 transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D PA2359 transcriptional regulator K11917 sfa3; sigma-54 dependent transcriptional regulator D PA1663 transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator D PA2665 anaerobic nitric oxide reductase transcriptional regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator D PA1050 hypothetical protein K02647 cdaR; carbohydrate diacid regulator D PA1196 transcriptional regulator K06714 rocR; arginine utilization regulatory protein D PA0487 molybdenum transport regulator K02019 modE; molybdate transport system regulatory protein D PA3864 dauR; transcriptional regulator K21829 dauR; D-arginine utilization repressor D PA2785 hypothetical protein K07727 K07727; putative transcriptional regulator D PA5403 transcriptional regulator K07727 K07727; putative transcriptional regulator D PA4077 transcriptional regulator K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D PA0782 putA; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D PA3391 nosR; regulatory protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D PA0857 bolA; morphogene protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D PA5562 spoOJ; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PA0873 phhR; transcriptional regulator PhhR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D PA2449 transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D PA1009 hypothetical protein K03567 gcvR; glycine cleavage system transcriptional repressor D PA5274 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D PA0403 pyrR; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D PA4182 hypothetical protein K07734 paiB; transcriptional regulator D PA0405 hypothetical protein K07735 algH; putative transcriptional regulator D PA4723 dksA; suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PA5536 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D PA4057 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D PA4581 rtcR; transcriptional regulator RtcR K14414 rtcR; transcriptional regulatory protein RtcR D PA4421 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 5, 2024 #
Classification taken and modified from TRANSFAC 7.0