+D GENES KO #

  KEGG Orthology (KO) - Paraglaciecola sp. T6c

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pat00010] D Patl_0973 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Patl_3623 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Patl_2592 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Patl_2087 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Patl_0242 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Patl_3327 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Patl_1574 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Patl_1634 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Patl_1640 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Patl_2596 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Patl_3328 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Patl_2593 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Patl_3611 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Patl_3266 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Patl_0968 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Patl_1744 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Patl_2594 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Patl_3350 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Patl_1115 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Patl_1114 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Patl_3351 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Patl_3352 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Patl_1438 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_1829 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_1481 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Patl_2391 Alcohol dehydrogenase, zinc-binding protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D Patl_1426 Alcohol dehydrogenase GroES-like protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Patl_1855 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Patl_1874 Aldehyde dehydrogenase (NAD+) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Patl_0521 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Patl_2682 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Patl_3534 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Patl_2198 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Patl_1633 Aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D Patl_2282 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Patl_2509 PTS system D-glucose-specific IIA component, Glc family K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:pat00020] D Patl_1794 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Patl_1284 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Patl_3428 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Patl_2377 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Patl_3197 Isocitrate dehydrogenase (NAD+) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D Patl_1799 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Patl_1800 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Patl_3352 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Patl_1802 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Patl_1801 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Patl_3791 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Patl_1797 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Patl_1798 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Patl_1795 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Patl_1796 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Patl_1628 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Patl_2056 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Patl_0539 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Patl_2282 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Patl_3350 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Patl_1115 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Patl_1114 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Patl_3351 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:pat00030] D Patl_3623 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Patl_0970 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Patl_0971 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D Patl_2110 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Patl_0659 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Patl_3330 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Patl_3622 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Patl_3508 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Patl_3505 PfkB K00852 rbsK; ribokinase [EC:2.7.1.15] D Patl_2198 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Patl_2567 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Patl_0972 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D Patl_0974 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Patl_2643 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Patl_2112 quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D Patl_2641 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D Patl_3644 gluconate kinase, SKI family K00851 idnK; gluconokinase [EC:2.7.1.12] D Patl_3657 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Patl_2644 PfkB K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Patl_0836 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Patl_1969 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Patl_0336 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Patl_3327 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Patl_0242 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Patl_2592 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Patl_2087 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:pat00040] D Patl_2552 short-chain dehydrogenase/reductase SDR K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D Patl_0800 D-altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D Patl_3648 D-mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Patl_0291 D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D Patl_0834 Mannitol dehydrogenase-like protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D Patl_3649 Mannitol dehydrogenase rossman-like protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D Patl_3200 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Patl_3199 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Patl_0659 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Patl_3725 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D Patl_3726 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Patl_3529 short-chain dehydrogenase/reductase SDR K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175] C 00051 Fructose and mannose metabolism [PATH:pat00051] D Patl_4122 PfkB K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Patl_3646 Phosphomannose isomerase-like protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Patl_1793 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Patl_1792 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Patl_0798 amidohydrolase 2 K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120] D Patl_0849 fumarylacetoacetate (FAA) hydrolase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D Patl_2162 mannosyl-3-phosphoglycerate phosphatase family K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D Patl_2592 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Patl_2087 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Patl_0242 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Patl_3726 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Patl_0779 Mannitol dehydrogenase-like protein K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D Patl_1531 UDP-glucose/GDP-mannose dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D Patl_3639 Poly(beta-D-mannuronate) lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3] D Patl_3640 Poly(beta-D-mannuronate) lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3] D Patl_3659 Poly(beta-D-mannuronate) lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3] D Patl_3327 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Patl_1574 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Patl_3823 Levanase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80] C 00052 Galactose metabolism [PATH:pat00052] D Patl_2682 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Patl_3534 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Patl_0647 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Patl_0648 UDP-glucose-hexose-1-phosphate uridylyltransferase / UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Patl_3246 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Patl_3199 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Patl_2198 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Patl_0973 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Patl_4065 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_0821 glycoside hydrolase family 2, TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_0832 glycoside hydrolase family 2, sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_0804 glycoside hydrolase family 2, sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_2144 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D Patl_3069 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Patl_3687 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Patl_2592 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Patl_2087 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Patl_2646 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D Patl_1686 Mandelate racemase/muconate lactonizing enzyme-like protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D Patl_0898 2-keto-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D Patl_3530 2-keto-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D Patl_0899 2-keto-3-deoxy-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] C 00053 Ascorbate and aldarate metabolism [PATH:pat00053] D Patl_3200 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Patl_2641 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D Patl_1087 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Patl_0897 Mandelate racemase/muconate lactonizing enzyme-like protein K18983 gci; D-galactarolactone cycloisomerase [EC:5.5.1.27] C 00500 Starch and sucrose metabolism [PATH:pat00500] D Patl_3820 alpha amylase, catalytic region K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D Patl_2164 alpha amylase, catalytic region K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D Patl_3199 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Patl_3730 glycoside hydrolase, family 3-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Patl_0825 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Patl_1404 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Patl_3274 cellobiose phosphorylase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D Patl_3063 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Patl_2932 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Patl_3581 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Patl_2084 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Patl_0080 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21] D Patl_1636 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Patl_2113 maltooligosyl trehalose hydrolase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Patl_2197 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Patl_1941 alpha-1,6-glucosidase, pullulanase-type K01200 pulA; pullulanase [EC:3.2.1.41] D Patl_2859 Alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D Patl_1635 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Patl_2509 PTS system D-glucose-specific IIA component, Glc family K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Patl_1637 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D Patl_1825 Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D Patl_2198 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Patl_0973 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Patl_3623 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Patl_4122 PfkB K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pat00520] D Patl_1716 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Patl_4162 glycoside hydrolase, family 3-like protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Patl_2509 PTS system D-glucose-specific IIA component, Glc family K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Patl_4174 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Patl_0124 ATPase, BadF/BadG/BcrA/BcrD type K18676 gspK; glucosamine kinase [EC:2.7.1.8] D Patl_4169 ATPase, BadF/BadG/BcrA/BcrD type K18676 gspK; glucosamine kinase [EC:2.7.1.8] D Patl_4122 PfkB K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Patl_3881 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Patl_4173 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Patl_0131 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Patl_1573 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Patl_3879 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Patl_4168 glucokinase regulatory-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D Patl_2903 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D Patl_2472 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D Patl_3417 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D Patl_3416 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D Patl_0555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Patl_3999 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Patl_3080 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Patl_3074 hypothetical protein K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202] D Patl_3075 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Patl_3078 acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D Patl_0842 Alpha-L-arabinofuranosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Patl_0973 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Patl_2198 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Patl_3199 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Patl_3200 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Patl_0647 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Patl_0648 UDP-glucose-hexose-1-phosphate uridylyltransferase / UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Patl_3246 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Patl_3069 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Patl_1087 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Patl_3623 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Patl_3646 Phosphomannose isomerase-like protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Patl_1793 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Patl_1792 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Patl_3059 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Patl_1531 UDP-glucose/GDP-mannose dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D Patl_3063 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Patl_3062 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Patl_2932 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Patl_3581 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Patl_2084 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:pat00620] D Patl_0521 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Patl_3350 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Patl_1115 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Patl_1114 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Patl_3351 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Patl_3352 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Patl_1481 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Patl_1438 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_1829 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_2391 Alcohol dehydrogenase, zinc-binding protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D Patl_1426 Alcohol dehydrogenase GroES-like protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Patl_1855 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D Patl_2590 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Patl_2591 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Patl_0968 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Patl_1265 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Patl_0089 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Patl_0090 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Patl_1605 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Patl_1874 Aldehyde dehydrogenase (NAD+) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Patl_3791 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Patl_2088 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D Patl_2281 FAD linked oxidase-like protein K18930 dld; D-lactate dehydrogenase D Patl_2553 Betaine-aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D Patl_1402 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Patl_2635 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Patl_1895 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Patl_1447 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D Patl_0724 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Patl_4187 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Patl_3012 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Patl_3011 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Patl_3013 sodium pump decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D Patl_0539 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Patl_1628 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Patl_2056 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Patl_0606 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Patl_2282 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Patl_1744 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Patl_2594 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Patl_1213 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D Patl_2923 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1917 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_3268 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Patl_1479 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pat00630] D Patl_1215 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D Patl_0521 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Patl_1213 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D Patl_0539 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Patl_1794 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Patl_1284 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Patl_3428 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Patl_2923 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1917 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_2767 FAD linked oxidase-like protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Patl_0481 Catalase K03781 katE; catalase [EC:1.11.1.6] D Patl_1107 Catalase K03781 katE; catalase [EC:1.11.1.6] D Patl_0766 Catalase K03781 katE; catalase [EC:1.11.1.6] D Patl_1447 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D Patl_2043 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Patl_4201 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_1025 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_1299 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Patl_3590 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Patl_3592 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Patl_3352 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Patl_3591 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Patl_2687 Twin-arginine translocation pathway signal K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D Patl_0336 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Patl_2161 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D Patl_2553 Betaine-aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D Patl_0974 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Patl_2643 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Patl_0486 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:pat00640] D Patl_0521 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Patl_2590 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Patl_2591 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Patl_2036 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Patl_2037 Transketolase, central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Patl_2038 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Patl_3352 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Patl_2639 Alcohol dehydrogenase, zinc-binding protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Patl_2957 Alcohol dehydrogenase, zinc-binding protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Patl_0201 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Patl_1664 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Patl_1265 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Patl_0089 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Patl_0090 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Patl_1605 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Patl_1801 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Patl_1802 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Patl_0948 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Patl_1420 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D Patl_1421 2-methylcitrate dehydratase (trans-methylaconitate-forming) K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D Patl_1422 2-methylaconitate cis-trans isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D Patl_3428 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Patl_1419 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D Patl_0985 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D Patl_3672 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:pat00650] D Patl_2923 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1917 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_2321 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Patl_1916 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Patl_0201 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Patl_1664 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Patl_0451 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Patl_3011 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Patl_1797 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Patl_1798 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Patl_1795 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Patl_1796 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Patl_3931 Pyridoxal-dependent decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Patl_0896 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Patl_1911 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Patl_3791 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Patl_2762 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Patl_2929 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Patl_1620 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Patl_1619 butyryl-CoA:acetate CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Patl_1976 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D Patl_3850 thiamine pyrophosphate enzyme-like TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Patl_0624 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Patl_0625 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Patl_3762 Acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D Patl_2551 Alcohol dehydrogenase GroES-like protein K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D Patl_2719 short-chain dehydrogenase/reductase SDR K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:pat00660] D Patl_3850 thiamine pyrophosphate enzyme-like TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Patl_0624 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Patl_0625 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Patl_3762 Acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D Patl_1801 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Patl_1802 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Patl_2716 MaoC-like dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56] D Patl_3890 4-carboxy-4-hydroxy-2-oxoadipate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D Patl_0590 Dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D Patl_2765 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Patl_3270 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Patl_3271 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Patl_2764 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Patl_3269 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:pat00562] D Patl_1232 Inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Patl_0948 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Patl_1574 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pat00190] D Patl_4266 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Patl_1797 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Patl_1798 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Patl_1795 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Patl_1796 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Patl_3701 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Patl_3700 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Patl_3699 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Patl_1294 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Patl_4238 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Patl_1293 cytochrome bo3 quinol oxidase subunit 4 K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D Patl_4243 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D Patl_4245 Cytochrome-c oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Patl_4246 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Patl_4244 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D Patl_4239 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Patl_2073 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Patl_2072 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Patl_2071 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Patl_2070 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Patl_1292 cytochrome bo3 quinol oxidase subunit 3 K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D Patl_1291 cytochrome bo3 quinol oxidase subunit 1 apoprotein K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D Patl_1290 cytochrome bo3 quinol oxidase subunit 2 K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D Patl_1452 cytochrome bd quinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Patl_1453 cytochrome bd quinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Patl_1454 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Patl_4297 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Patl_2675 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Patl_4295 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Patl_2668 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Patl_4296 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Patl_2676 H+-transporting two-sector ATPase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Patl_4298 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Patl_4294 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Patl_2669 H+-transporting two-sector ATPase, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Patl_4301 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Patl_2672 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Patl_4299 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Patl_2674 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Patl_4300 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Patl_2673 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Patl_0140 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Patl_3322 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:pat00680] D Patl_0850 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D Patl_1438 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_1829 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_1439 Carboxylesterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D Patl_1828 Carboxylesterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D Patl_1299 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Patl_2043 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Patl_0336 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Patl_3266 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Patl_0606 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Patl_0539 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Patl_3327 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Patl_0242 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Patl_2592 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Patl_2087 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Patl_0157 Twin-arginine translocation pathway signal K15228 mauA; methylamine dehydrogenase light chain [EC:1.4.9.1] D Patl_0160 Amine dehydrogenase K15229 mauB; methylamine dehydrogenase heavy chain [EC:1.4.9.1] D Patl_2590 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Patl_2591 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Patl_0521 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Patl_1744 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Patl_2594 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Patl_2593 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Patl_3611 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Patl_1156 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Patl_2469 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Patl_1278 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:pat00910] D Patl_2419 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Patl_2417 putative nitrate transport protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D Patl_2416 binding-protein-dependent transport systems inner membrane component K15577 nrtB; nitrate/nitrite transport system permease protein D Patl_2415 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D Patl_2532 assimilatory nitrate reductase (NADH) alpha subunit apoprotein K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D Patl_2534 assimilatory nitrite reductase (NAD(P)H) large subunit precursor K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D Patl_2533 nitrite reductase (NAD(P)H), small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D Patl_2707 2-nitropropane dioxygenase, NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Patl_0316 2-nitropropane dioxygenase, NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Patl_0189 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Patl_2399 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Patl_2002 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Patl_0286 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Patl_4201 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_1025 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_3748 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Patl_3749 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Patl_3478 cyanate lyase K01725 cynS; cyanate lyase [EC:4.2.1.104] D Patl_4013 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D Patl_4260 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:pat00920] D Patl_1648 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Patl_1651 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Patl_1650 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Patl_1649 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Patl_0137 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Patl_4037 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Patl_4039 sulfite reductase (NADPH) alpha subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D Patl_4038 sulfite reductase (NADPH) beta subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D Patl_2221 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Patl_0063 thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D Patl_1236 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Patl_4078 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Patl_0400 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Patl_2517 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Patl_1882 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Patl_3021 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Patl_1978 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Patl_1913 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D Patl_0656 acyl-CoA dehydrogenase-like protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D Patl_1918 acyl-CoA dehydrogenase-like protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D Patl_1408 acyl-CoA dehydrogenase-like protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pat00061] D Patl_1265 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Patl_0089 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Patl_0090 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Patl_1605 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Patl_2121 acyl carrier protein K02078 acpP; acyl carrier protein D Patl_4045 conserved hypothetical protein K02078 acpP; acyl carrier protein D Patl_2123 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Patl_2124 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Patl_3779 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180] D Patl_3383 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Patl_2120 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Patl_2122 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_0769 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_0952 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3071 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_4046 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3661 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3641 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_2009 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Patl_1260 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Patl_0922 2-nitropropane dioxygenase, NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D Patl_0451 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Patl_0322 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_1368 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_2804 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_0998 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_3811 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:pat00071] D Patl_2923 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1917 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1663 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Patl_0202 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Patl_0201 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Patl_1664 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Patl_1916 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Patl_1812 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Patl_3783 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Patl_1688 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Patl_0635 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Patl_2492 acyl-CoA dehydrogenase-like protein K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D Patl_3993 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Patl_0322 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_1368 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_2804 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_0998 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_3811 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_2303 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D Patl_1438 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_1829 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_1481 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pat00561] D Patl_0336 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Patl_2161 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Patl_1426 Alcohol dehydrogenase GroES-like protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Patl_3533 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Patl_4248 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Patl_2125 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Patl_1043 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Patl_1030 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Patl_1057 lipase, class 2 K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D Patl_1267 lipase, class 3 K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D Patl_3687 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:pat00564] D Patl_3615 glycerol 3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Patl_3682 FAD dependent oxidoreductase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21] D Patl_4248 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Patl_1043 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Patl_1030 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Patl_3211 Glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D Patl_3732 Phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D Patl_2081 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Patl_0989 alpha/beta hydrolase fold familiy K01048 pldB; lysophospholipase [EC:3.1.1.5] D Patl_3485 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Patl_1401 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Patl_1427 Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D Patl_1428 Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D Patl_1254 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Patl_1340 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Patl_3483 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Patl_2448 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Patl_1317 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D Patl_1467 cardiolipin synthetase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:pat00565] D Patl_2081 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Patl_3732 Phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] C 00600 Sphingolipid metabolism [PATH:pat00600] D Patl_4065 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_0821 glycoside hydrolase family 2, TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_0832 glycoside hydrolase family 2, sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_0804 glycoside hydrolase family 2, sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_0819 sulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8] D Patl_3687 glycoside hydrolase, clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism [PATH:pat00590] D Patl_2081 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Patl_3111 peptidase M1, membrane alanine aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] C 00591 Linoleic acid metabolism D Patl_2081 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:pat00592] D Patl_2081 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Patl_1663 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Patl_0202 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:pat01040] D Patl_4032 Delta-9 acyl-phospholipid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D Patl_2914 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Patl_2041 Palmitoyl-CoA hydrolase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D Patl_0385 thioesterase superfamily K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pat00230] D Patl_0431 Nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Patl_1523 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Patl_0138 NUDIX hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D Patl_2198 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Patl_2567 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Patl_1609 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Patl_0266 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Patl_2490 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Patl_3057 formyl transferase-like protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Patl_3113 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Patl_2489 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Patl_4225 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Patl_4224 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Patl_2476 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Patl_2381 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Patl_0268 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Patl_2898 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Patl_3565 5'-Nucleotidase-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Patl_3860 5'-nucleotidase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Patl_0139 HAD-superfamily hydrolase, subfamily IA, variant 3 K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D Patl_1547 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Patl_1336 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Patl_3120 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Patl_3130 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Patl_3918 protein of unknown function DUF84 K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D Patl_3287 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Patl_2424 molybdopterin dehydrogenase, FAD-binding protein K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D Patl_2425 Xanthine oxidase / xanthine dehydrogenase, molybdenum binding subunit apoprotein K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D Patl_3119 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Patl_2429 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D Patl_0347 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Patl_2473 ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Patl_2474 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Patl_2015 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Patl_3793 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Patl_2032 conserved hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Patl_2017 putative phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Patl_2033 putative alpha helix protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Patl_0349 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Patl_4220 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Patl_3323 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Patl_3707 (p)ppGpp synthetase I, SpoT/RelA K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D Patl_0494 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Patl_2382 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Patl_0338 cyclic-AMP phosphodiesterase K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17] D Patl_0215 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Patl_2222 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D Patl_3194 conserved hypothetical protein 730 K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D Patl_2420 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D Patl_2390 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D Patl_2893 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Patl_3706 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Patl_0433 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D Patl_3423 Bis(5'nucleosyl)-tetraphosphatase, ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D Patl_1650 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Patl_1648 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Patl_1651 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Patl_2428 Transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Patl_2427 conserved hypothetical protein K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D Patl_2422 polysaccharide deacetylase K16842 hpxB; allantoinase [EC:3.5.2.5] D Patl_2051 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9] D Patl_2052 aminotransferase, class V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D Patl_2054 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:pat00240] D Patl_2214 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Patl_2215 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Patl_0496 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Patl_0584 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Patl_2003 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Patl_4281 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Patl_2463 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Patl_1251 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Patl_3130 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Patl_3706 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Patl_0186 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Patl_1390 protein of unknown function DUF45 K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D Patl_3265 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Patl_2467 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Patl_0533 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Patl_3565 5'-Nucleotidase-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Patl_3860 5'-nucleotidase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Patl_1547 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Patl_0086 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Patl_3194 conserved hypothetical protein 730 K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D Patl_0790 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Patl_3869 Cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Patl_1899 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Patl_0327 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Patl_2473 ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Patl_2474 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Patl_2032 conserved hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Patl_2017 putative phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Patl_2033 putative alpha helix protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Patl_2117 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Patl_0626 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Patl_3837 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pat00250] D Patl_4016 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Patl_3156 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Patl_0005 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Patl_1544 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Patl_1194 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Patl_2955 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Patl_2034 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Patl_2043 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Patl_2462 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Patl_0979 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Patl_0978 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Patl_0215 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Patl_2381 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Patl_0496 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Patl_3931 Pyridoxal-dependent decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Patl_0896 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Patl_1911 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Patl_3748 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Patl_3749 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Patl_2002 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Patl_0286 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Patl_2218 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Patl_4201 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_1025 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_2214 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Patl_2215 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Patl_2048 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Patl_3881 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Patl_4173 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Patl_0131 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Patl_1609 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pat00260] D Patl_3425 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Patl_3580 homoserine dehydrogenase / aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Patl_3363 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Patl_3579 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Patl_3578 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Patl_1299 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Patl_2043 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Patl_1447 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D Patl_0336 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Patl_2593 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Patl_3611 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Patl_2161 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D Patl_1156 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Patl_2469 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Patl_1278 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Patl_0061 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Patl_0062 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D Patl_1720 Twin-arginine translocation pathway signal K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Patl_3590 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Patl_3592 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Patl_3352 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Patl_3591 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Patl_3809 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D Patl_1340 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Patl_2587 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D Patl_2588 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D Patl_1625 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Patl_4249 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Patl_2834 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Patl_2833 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:pat00270] D Patl_1236 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Patl_4078 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Patl_0400 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Patl_2517 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Patl_1882 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Patl_3628 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Patl_0921 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Patl_3331 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Patl_0361 autoinducer synthesis protein K13060 lasI; acyl homoserine lactone synthase [EC:2.3.1.184] D Patl_0518 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Patl_0549 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Patl_1336 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Patl_1990 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D Patl_4096 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Patl_0727 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Patl_0753 D-cysteine desulfhydrase, PLP-dependent enzyme K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D Patl_3425 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Patl_3580 homoserine dehydrogenase / aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Patl_3363 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Patl_3021 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Patl_1978 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Patl_3406 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Patl_0616 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Patl_4021 cystathionine gamma-synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Patl_2886 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Patl_1366 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Patl_1152 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Patl_4016 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Patl_2221 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Patl_1784 pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D Patl_0539 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Patl_2666 pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25] D Patl_1625 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Patl_1156 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Patl_2469 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:pat00280] D Patl_2886 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Patl_2995 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D Patl_2036 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Patl_2037 Transketolase, central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Patl_2038 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Patl_3352 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Patl_1812 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Patl_3783 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Patl_1688 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Patl_0635 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Patl_2925 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D Patl_0201 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Patl_1664 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Patl_1663 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Patl_0202 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Patl_0951 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Patl_0948 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Patl_2928 3-methylcrotonoyl-CoA carboxylase, alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D Patl_2926 Propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D Patl_2927 Enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D Patl_2762 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Patl_2929 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Patl_1620 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Patl_1619 butyryl-CoA:acetate CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Patl_2923 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1917 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pat00290] D Patl_4249 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Patl_2765 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Patl_3270 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Patl_3271 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Patl_2764 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Patl_3269 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Patl_3850 thiamine pyrophosphate enzyme-like TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Patl_0624 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Patl_0625 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Patl_4255 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Patl_4250 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Patl_2886 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Patl_2995 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D Patl_2034 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Patl_3268 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Patl_1479 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:pat00300] D Patl_3425 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Patl_3580 homoserine dehydrogenase / aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Patl_3363 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Patl_2478 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Patl_2216 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Patl_3394 putative 2,3,4, 5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D Patl_0163 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Patl_0651 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Patl_2192 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Patl_4074 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Patl_4073 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Patl_3524 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Patl_3523 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:pat00310] D Patl_1800 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Patl_3352 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Patl_3993 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Patl_0201 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Patl_1664 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Patl_2923 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1917 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_0896 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Patl_1911 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Patl_1746 FAD linked oxidase-like protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D Patl_4024 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:pat00220] D Patl_0980 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Patl_0979 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Patl_0978 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Patl_2048 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Patl_4201 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_1025 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_2002 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Patl_0286 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Patl_4016 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Patl_2034 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Patl_0977 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D Patl_0981 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Patl_0982 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Patl_0163 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Patl_0651 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Patl_0983 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:pat00330] D Patl_3869 Cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Patl_3873 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Patl_3965 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D Patl_0747 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Patl_0928 GCN5-related N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D Patl_1720 Twin-arginine translocation pathway signal K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Patl_2055 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Patl_0164 arginine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D Patl_0650 arginine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D Patl_2357 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D Patl_0649 succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D Patl_2195 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D Patl_3719 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Patl_2218 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Patl_4146 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Patl_4269 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Patl_4145 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Patl_4268 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Patl_3951 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Patl_4016 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Patl_4024 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Patl_3809 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00340 Histidine metabolism [PATH:pat00340] D Patl_2880 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Patl_2888 phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Patl_2885 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Patl_2884 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Patl_2887 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Patl_2883 histidinol-phosphate phosphatase / imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D Patl_2882 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Patl_2881 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Patl_1022 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Patl_1021 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D Patl_1019 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D Patl_1018 formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Patl_1720 Twin-arginine translocation pathway signal K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Patl_2433 conserved hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:pat00350] D Patl_4016 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Patl_2882 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Patl_2997 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Patl_1125 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Patl_1448 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D Patl_1123 fumarylacetoacetate hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D Patl_0854 fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D Patl_1720 Twin-arginine translocation pathway signal K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Patl_1438 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_1829 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_1481 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Patl_3884 4-carboxy-2-hydroxymuconate semialdehyde dehydrogenase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D Patl_2612 putative 5-carboxymethyl-2-hydroxymuconate delta isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D Patl_0896 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Patl_1911 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Patl_3763 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D Patl_3899 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] C 00360 Phenylalanine metabolism [PATH:pat00360] D Patl_2999 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D Patl_1720 Twin-arginine translocation pathway signal K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Patl_1512 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Patl_3812 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D Patl_2321 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Patl_4016 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Patl_2882 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Patl_3763 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D Patl_3899 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D Patl_2997 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Patl_1125 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Patl_4024 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Patl_1975 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D Patl_2055 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Patl_2303 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:pat00380] D Patl_0410 Tryptophan 2,3-dioxygenase apoenzyme / Tryptophan 2,3-dioxygenase holoenzyme K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D Patl_2921 Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D Patl_0411 aminotransferase, class V K01556 KYNU; kynureninase [EC:3.7.1.3] D Patl_0847 Aminocarboxymuconate-semialdehyde decarboxylase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] D Patl_1800 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Patl_3352 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Patl_3993 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Patl_0201 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Patl_1664 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Patl_2923 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1917 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1720 Twin-arginine translocation pathway signal K00274 MAO; monoamine oxidase [EC:1.4.3.4] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Patl_0189 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Patl_2399 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Patl_2055 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Patl_0481 Catalase K03781 katE; catalase [EC:1.11.1.6] D Patl_1107 Catalase K03781 katE; catalase [EC:1.11.1.6] D Patl_0766 Catalase K03781 katE; catalase [EC:1.11.1.6] D Patl_1975 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pat00400] D Patl_1587 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Patl_1707 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Patl_0665 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Patl_0088 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Patl_0031 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Patl_0666 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Patl_2468 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Patl_1541 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Patl_2829 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Patl_2830 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Patl_2831 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Patl_2832 indole-3-glycerol phosphate synthase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D Patl_2834 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Patl_2833 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Patl_1588 chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D Patl_1590 chorismate mutase / prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Patl_4016 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Patl_2882 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Patl_2999 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pat00410] D Patl_3931 Pyridoxal-dependent decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Patl_3932 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Patl_0201 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Patl_1664 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Patl_0948 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:pat00430] D Patl_3931 Pyridoxal-dependent decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Patl_1885 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Patl_3459 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Patl_2462 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Patl_2002 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Patl_2591 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Patl_2590 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:pat00450] D Patl_3628 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Patl_0921 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Patl_1762 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Patl_2370 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Patl_1648 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Patl_1651 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Patl_1897 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pat00460] D Patl_3730 glycoside hydrolase, family 3-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Patl_0825 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Patl_0189 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Patl_2399 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Patl_1885 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Patl_3459 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Patl_1544 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Patl_1299 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:pat00470] D Patl_4025 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Patl_4024 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Patl_3517 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Patl_2048 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Patl_3521 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Patl_2789 protein of unknown function DUF1611 K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312] D Patl_2790 Mandelate racemase/muconate lactonizing enzyme-like protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D Patl_0005 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Patl_1784 pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D Patl_4074 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Patl_4073 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Patl_3809 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00480 Glutathione metabolism [PATH:pat00480] D Patl_1885 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Patl_3459 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Patl_3814 5-oxoprolinase (ATP-hydrolyzing) K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] D Patl_1366 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Patl_1152 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Patl_3562 aminopeptidase A, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Patl_3939 aminopeptidase B, Metallo peptidase, MEROPS family M17 K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D Patl_1996 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Patl_0196 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_1128 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_0872 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_3957 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_3824 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_2760 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_0620 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_4206 NADPH-glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D Patl_2377 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Patl_2110 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Patl_0970 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Patl_2176 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Patl_2526 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Patl_3338 Glutaredoxin-family domain protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D Patl_0356 Redoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:pat00511] D Patl_4065 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_0821 glycoside hydrolase family 2, TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_0832 glycoside hydrolase family 2, sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_0804 glycoside hydrolase family 2, sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Patl_0128 beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] D Patl_0823 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D Patl_0831 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D Patl_0125 asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26] C 00540 Lipopolysaccharide biosynthesis [PATH:pat00540] D Patl_1261 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Patl_3513 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Patl_1259 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Patl_1886 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Patl_1262 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Patl_1781 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Patl_0563 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Patl_2205 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Patl_0564 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Patl_1783 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Patl_0057 Three-deoxy-D-manno-octulosonic-acid transferase-like protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Patl_3603 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Patl_2723 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Patl_3435 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Patl_3668 conserved protein of unknown function; putative secreted protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D Patl_0942 conserved protein of unknown function; putative secreted protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D Patl_0055 lipopolysaccharide kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] C 00542 O-Antigen repeat unit biosynthesis [PATH:pat00542] D Patl_3243 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pat00541] D Patl_3199 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Patl_3246 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Patl_3069 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Patl_3200 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Patl_1087 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Patl_2131 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Patl_2132 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Patl_2130 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Patl_3061 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Patl_2129 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Patl_3063 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Patl_3062 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Patl_3646 Phosphomannose isomerase-like protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Patl_1793 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Patl_1792 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Patl_3059 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Patl_3879 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Patl_3080 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Patl_3074 hypothetical protein K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202] D Patl_3075 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Patl_3078 acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D Patl_4002 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00550 Peptidoglycan biosynthesis [PATH:pat00550] D Patl_0555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Patl_3999 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Patl_3518 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Patl_3521 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Patl_3524 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Patl_3517 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Patl_3523 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Patl_1253 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Patl_1046 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Patl_4071 phosphoesterase, PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Patl_3522 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Patl_3519 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Patl_0723 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Patl_0489 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Patl_1560 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Patl_3525 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Patl_1556 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Patl_4160 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:pat00552] D Patl_1046 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Patl_4071 phosphoesterase, PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Patl_3243 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Patl_4002 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:pat00543] D Patl_1070 sugar transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D Patl_3243 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Patl_1236 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Patl_4078 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Patl_1086 hypothetical protein K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251] D Patl_1188 glycosyl transferase, group 1 K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251] D Patl_1100 xanthan biosynthesis pyruvyltransferase GumL K13665 gumL; pyruvyltransferase D Patl_1094 GumL K13665 gumL; pyruvyltransferase B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pat00730] D Patl_1931 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Patl_1935 thiamine-phosphate diphosphorylase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D Patl_1238 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Patl_1932 glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19] D Patl_1319 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Patl_1934 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D Patl_1316 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Patl_3482 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Patl_1216 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Patl_1347 aminoglycoside phosphotransferase K07251 thiK; thiamine kinase [EC:2.7.1.89] D Patl_2893 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:pat00740] D Patl_3961 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Patl_1313 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Patl_1311 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Patl_4077 HAD-superfamily hydrolase, subfamily IA, variant 1 K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D Patl_1314 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Patl_1312 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Patl_3179 FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Patl_0991 oxidoreductase FAD/NAD(P)-binding protein K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D Patl_0431 Nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Patl_1523 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:pat00750] D Patl_3147 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Patl_4053 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Patl_3329 erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D Patl_3364 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D Patl_2469 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Patl_3420 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D Patl_3709 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D Patl_3578 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:pat00760] D Patl_3156 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Patl_0793 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Patl_3345 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Patl_3565 5'-Nucleotidase-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Patl_3860 5'-nucleotidase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Patl_1563 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Patl_3706 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Patl_0246 NUDIX hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D Patl_3163 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Patl_3262 CinA-like protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Patl_2058 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Patl_1715 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Patl_3655 putative NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Patl_3656 alanine dehydrogenase/PNT-like protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Patl_3654 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D Patl_2732 isochorismatase hydrolase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107] D Patl_0896 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Patl_1911 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:pat00770] D Patl_3850 thiamine pyrophosphate enzyme-like TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Patl_0624 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Patl_0625 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Patl_4255 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Patl_4250 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Patl_3933 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Patl_1362 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Patl_1772 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Patl_3932 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Patl_3997 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Patl_0045 Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Patl_3706 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Patl_0053 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Patl_3341 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Patl_3708 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Patl_0087 protein of unknown function DUF479 K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D Patl_2886 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:pat00780] D Patl_2555 Methyltransferase type 11 K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Patl_3383 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Patl_2120 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Patl_2122 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_0769 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_0952 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3071 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_4046 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3661 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3641 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_1260 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Patl_4230 carboxylesterase BioH (pimeloyl-CoA synthesis) K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Patl_2556 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Patl_2558 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Patl_2554 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Patl_2557 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Patl_3998 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:pat00785] D Patl_1554 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Patl_1553 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Patl_3352 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Patl_3350 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Patl_1115 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Patl_1114 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Patl_3351 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Patl_1799 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Patl_1800 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Patl_2036 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Patl_2037 Transketolase, central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Patl_2038 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Patl_3590 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Patl_3592 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Patl_3591 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pat00790] D Patl_0548 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Patl_0301 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D Patl_1216 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Patl_3408 alkaline phosphatase D domain protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Patl_2702 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Patl_0777 Twin-arginine translocation pathway signal K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Patl_2947 dihydroneopterin triphosphate pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D Patl_1044 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Patl_1045 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Patl_3934 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Patl_1572 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Patl_3735 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Patl_1606 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Patl_3961 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Patl_1313 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Patl_0653 aminodeoxychorismate synthase, glutamine amidotransferase subunit K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D Patl_1627 aminodeoxychorismate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Patl_2119 aminodeoxychorismate lyase apoprotein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Patl_2910 dihydroneopterin aldolase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D Patl_1692 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Patl_2999 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D Patl_2501 short-chain dehydrogenase/reductase SDR K03793 PTR1; pteridine reductase [EC:1.5.1.33] D Patl_2960 Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Patl_2961 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Patl_3193 GTP cyclohydrolase I K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Patl_2160 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Patl_2157 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Patl_2155 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Patl_2158 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Patl_2537 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Patl_2512 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D Patl_2159 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:pat00670] D Patl_3735 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Patl_3139 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Patl_1299 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Patl_2490 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Patl_3057 formyl transferase-like protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Patl_0268 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Patl_0022 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Patl_3592 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Patl_3837 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Patl_0486 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Patl_3955 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Patl_3507 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pat00860] D Patl_2919 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Patl_2564 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Patl_0495 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Patl_4219 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Patl_0342 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Patl_0341 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Patl_0245 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Patl_0029 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D Patl_1104 coproporphyrinogen III oxidase, anaerobic K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Patl_0547 conserved hypothetical protein 701 K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D Patl_3987 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Patl_0340 protein of unknown function DUF513, hemX K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Patl_0417 precorrin-2 dehydrogenase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D Patl_2531 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Patl_1294 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Patl_4238 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Patl_4239 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Patl_1134 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Patl_1135 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Patl_0517 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Patl_1131 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Patl_1130 aminotransferase K02225 cobC1; cobalamin biosynthesis protein CobC D Patl_1137 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Patl_1138 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Patl_1139 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Patl_1136 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Patl_1491 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D Patl_2075 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D Patl_2076 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pat00130] D Patl_0066 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D Patl_0067 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Patl_3501 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D Patl_2471 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Patl_4209 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Patl_2578 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D Patl_2485 flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Patl_2435 3-beta hydroxysteroid dehydrogenase/isomerase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Patl_2997 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Patl_1125 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pat00900] D Patl_1319 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Patl_1255 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Patl_3857 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Patl_2566 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Patl_3858 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Patl_3126 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Patl_3175 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Patl_2923 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1917 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_0427 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D Patl_1320 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Patl_3739 Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Patl_1253 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:pat00907] D Patl_0201 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Patl_1664 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Patl_2391 Alcohol dehydrogenase, zinc-binding protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D Patl_0321 short-chain dehydrogenase/reductase SDR K13774 atuB; citronellol/citronellal dehydrogenase D Patl_0315 acyl-CoA dehydrogenase-like protein K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-] D Patl_0319 Carbamoyl-phosphate synthase L chain, ATP-binding protein K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5] D Patl_0317 carboxyl transferase K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5] D Patl_0318 Enoyl-CoA hydratase K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57] D Patl_2762 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Patl_2929 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Patl_1663 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Patl_0202 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Patl_3330 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products D Patl_0462 beta-lactamase-like protein K05555 actIV; cyclase [EC:4.-.-.-] C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:pat00523] D Patl_2131 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Patl_2132 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Patl_2130 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Patl_3061 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Patl_2129 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:pat01054] D Patl_0005 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics [PATH:pat01055] D Patl_2274 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D Patl_2132 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:pat00946] D Patl_3730 glycoside hydrolase, family 3-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Patl_0825 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Patl_0859 monooxygenase, FAD-binding protein K26180 fdeE; naringenin degradation protein FdeE D Patl_0857 Glyoxalase/bleomycin resistance protein/dioxygenase K26181 fdeC; naringenin degradation protein FdeC D Patl_0856 conserved hypothetical protein K26184 fdeB; naringenin degradation protein FdeB C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D Patl_3809 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00332 Carbapenem biosynthesis [PATH:pat00332] D Patl_4146 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Patl_4269 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Patl_4145 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Patl_4268 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:pat00261] D Patl_2274 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D Patl_1648 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Patl_1651 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Patl_3425 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Patl_3580 homoserine dehydrogenase / aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Patl_3363 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Patl_2478 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Patl_2216 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pat00521] D Patl_0973 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Patl_2198 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Patl_1232 Inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Patl_2131 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Patl_2132 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Patl_2130 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Patl_3061 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Patl_2129 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Patl_0973 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:pat00525] D Patl_2131 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Patl_2132 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:pat00401] D Patl_1588 chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D Patl_4016 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Patl_2882 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis D Patl_4289 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Patl_3277 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Patl_3685 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Patl_3817 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Patl_0807 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Patl_2546 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Patl_1964 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Patl_3276 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D Patl_2829 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Patl_2830 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Patl_2123 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Patl_2122 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_0769 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_0952 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3071 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_4046 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3661 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3641 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Patl_2121 acyl carrier protein K02078 acpP; acyl carrier protein D Patl_4045 conserved hypothetical protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:pat00999] D Patl_3331 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Patl_0031 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Patl_3730 glycoside hydrolase, family 3-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Patl_0825 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:pat00362] D Patl_1663 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Patl_0202 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Patl_0074 alpha/beta hydrolase fold familiy K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D Patl_3886 protocatechuate 4,5-dioxygenase alpha subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D Patl_3885 protocatechuate 4,5-dioxygenase beta subunit K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D Patl_3884 4-carboxy-2-hydroxymuconate semialdehyde dehydrogenase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D Patl_3887 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D Patl_3889 methylitaconate delta2-delta3-isomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D Patl_3888 4-oxalomesaconate hydratase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83] D Patl_3890 4-carboxy-4-hydroxy-2-oxoadipate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D Patl_0590 Dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D Patl_3893 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D Patl_1664 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Patl_0201 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Patl_1916 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Patl_3011 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Patl_3993 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Patl_2321 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Patl_2923 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1917 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:pat00627] D Patl_2055 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Patl_0189 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Patl_2399 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Patl_0844 Rieske (2Fe-2S) region K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D Patl_0869 ferredoxin K03863 vanB; vanillate monooxygenase ferredoxin subunit D Patl_3886 protocatechuate 4,5-dioxygenase alpha subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D Patl_3885 protocatechuate 4,5-dioxygenase beta subunit K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D Patl_3884 4-carboxy-2-hydroxymuconate semialdehyde dehydrogenase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D Patl_3887 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] C 00364 Fluorobenzoate degradation [PATH:pat00364] D Patl_1546 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Patl_0207 Twin-arginine translocation pathway signal K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:pat00625] D Patl_1915 alpha/beta hydrolase fold familiy K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D Patl_1481 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Patl_1438 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_1829 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_3760 4-hydroxybenzaldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Patl_0850 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D Patl_1855 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D Patl_0275 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pat00361] D Patl_1915 alpha/beta hydrolase fold familiy K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D Patl_1546 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Patl_0207 Twin-arginine translocation pathway signal K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Patl_0275 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:pat00623] D Patl_3763 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D Patl_3899 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D Patl_1202 4-cresol dehydrogenase (hydroxylating) K05797 pchF; 4-cresol dehydrogenase (hydroxylating) flavoprotein subunit [EC:1.17.9.1] D Patl_1546 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Patl_0207 Twin-arginine translocation pathway signal K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:pat00622] D Patl_3763 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D Patl_3899 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D Patl_0074 alpha/beta hydrolase fold familiy K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] C 00633 Nitrotoluene degradation [PATH:pat00633] D Patl_1425 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D Patl_1663 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Patl_0202 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:pat00643] D Patl_1448 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D Patl_1123 fumarylacetoacetate hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D Patl_0854 fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D Patl_2055 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Patl_0189 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Patl_2399 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Patl_0074 alpha/beta hydrolase fold familiy K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:pat00930] D Patl_2641 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D Patl_0201 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Patl_1664 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:pat00626] D Patl_1481 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Patl_1438 Alcohol dehydrogenase, zinc-binding protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Patl_1829 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D Patl_3886 protocatechuate 4,5-dioxygenase alpha subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D Patl_3885 protocatechuate 4,5-dioxygenase beta subunit K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pat03020] D Patl_0598 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Patl_0599 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Patl_1014 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Patl_0348 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pat03010] D Patl_2466 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Patl_1249 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Patl_0475 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Patl_1013 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Patl_1006 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Patl_3746 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D Patl_0601 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Patl_1003 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Patl_3702 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Patl_0468 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Patl_1012 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Patl_0600 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Patl_1011 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Patl_1002 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Patl_1698 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Patl_1577 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Patl_0478 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Patl_3745 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Patl_0473 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Patl_3181 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Patl_1041 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Patl_0595 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Patl_0472 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Patl_0469 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Patl_0470 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Patl_1001 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Patl_1004 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Patl_0597 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Patl_3744 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Patl_0596 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Patl_0594 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Patl_3703 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Patl_0999 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Patl_1008 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Patl_0476 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Patl_1015 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Patl_1005 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Patl_1580 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Patl_2496 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Patl_3738 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Patl_0474 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Patl_0471 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Patl_1000 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Patl_2569 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Patl_3737 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Patl_0048 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Patl_0477 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Patl_1007 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Patl_4188 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Patl_2126 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Patl_0049 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Patl_4315 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Patl_2497 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Patl_1010 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Patl_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0023 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0083 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0079 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pat00970] D Patl_R0002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0017 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0082 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0056 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Patl_R0067 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Patl_R0070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Patl_R0065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Patl_R0064 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Patl_R0062 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Patl_R0063 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Patl_R0038 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Patl_R0039 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Patl_R0040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Patl_R0043 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Patl_R0048 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Patl_R0052 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Patl_R0051 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Patl_R0053 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Patl_R0055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Patl_R0054 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Patl_R0044 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Patl_R0072 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Patl_R0073 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Patl_R0076 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Patl_R0069 tRNA-His K14226 tRNA-His; tRNA His D Patl_R0003 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Patl_R0081 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Patl_R0010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Patl_R0018 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Patl_R0025 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Patl_R0042 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Patl_R0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Patl_R0074 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Patl_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Patl_R0068 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Patl_R0060 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Patl_R0061 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Patl_R0049 tRNA-Met K14230 tRNA-Met; tRNA Met D Patl_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met D Patl_R0031 tRNA-Met K14230 tRNA-Met; tRNA Met D Patl_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met D Patl_R0037 tRNA-Met K14230 tRNA-Met; tRNA Met D Patl_R0006 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Patl_R0071 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Patl_R0034 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Patl_R0046 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Patl_R0045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Patl_R0015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Patl_R0066 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Patl_R0075 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Patl_R0078 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Patl_R0084 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Patl_R0013 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Patl_R0029 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Patl_R0077 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Patl_R0057 tRNA-Val K14237 tRNA-Val; tRNA Val D Patl_R0058 tRNA-Val K14237 tRNA-Val; tRNA Val D Patl_R0059 tRNA-Val K14237 tRNA-Val; tRNA Val D Patl_R0047 tRNA-Val K14237 tRNA-Val; tRNA Val D Patl_2919 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Patl_3426 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Patl_2184 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Patl_3015 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Patl_2948 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Patl_1879 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Patl_0009 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Patl_0008 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Patl_2499 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Patl_2456 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Patl_1888 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Patl_1897 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Patl_0022 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Patl_3564 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Patl_1566 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Patl_3178 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Patl_1361 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Patl_1359 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Patl_1276 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Patl_3125 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Patl_2495 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Patl_2494 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Patl_0514 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Patl_0658 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pat03060] D Patl_1009 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Patl_0592 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Patl_1575 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Patl_4203 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Patl_1230 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Patl_4204 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Patl_1231 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Patl_1229 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Patl_4312 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Patl_3511 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Patl_3614 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Patl_1670 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Patl_3944 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Patl_4213 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Patl_2610 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Patl_4214 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Patl_2609 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D Patl_4215 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D Patl_2608 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D Patl_2309 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Patl_3150 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Patl_3177 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:pat04122] D Patl_1238 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Patl_2221 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Patl_4280 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Patl_2454 DsrH family protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Patl_2453 DsrE-like protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D Patl_2452 DsrE-like protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Patl_2455 DsrC-like protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Patl_2379 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Patl_2155 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Patl_2160 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Patl_2156 molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein D Patl_2536 [molybdopterin synthase] sulfurylase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Patl_1936 UBA/THIF-type NAD/FAD binding fold familiy K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D Patl_2157 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Patl_2158 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Patl_1933 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:pat03018] D Patl_3846 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Patl_2134 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Patl_4221 DEAD/DEAH box helicase-like protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Patl_3266 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Patl_1632 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Patl_2135 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Patl_2330 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Patl_2438 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Patl_0994 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Patl_3785 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Patl_0418 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Patl_0252 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Patl_0617 ATP-dependent DNA helicase, RecQ-like protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Patl_4223 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Patl_2592 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Patl_1987 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Patl_3753 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Patl_3978 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Patl_3322 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Patl_3935 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:pat03030] D Patl_2364 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2348 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2503 Exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_0529 Exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_1264 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Patl_2897 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Patl_2116 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Patl_1564 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Patl_3563 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Patl_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Patl_0251 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Patl_1039 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Patl_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Patl_2365 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Patl_1263 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Patl_0015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Patl_1776 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:pat03410] D Patl_2971 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Patl_3577 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Patl_0076 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Patl_0051 Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Patl_3875 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Patl_0010 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Patl_2648 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Patl_0015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Patl_3712 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Patl_1776 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:pat03420] D Patl_1725 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Patl_0146 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Patl_1839 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Patl_2963 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Patl_2449 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Patl_4079 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Patl_0732 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Patl_0015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Patl_1776 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:pat03430] D Patl_3263 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Patl_3976 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Patl_3848 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D Patl_4079 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Patl_0732 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Patl_2172 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Patl_3121 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Patl_1321 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Patl_3712 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Patl_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Patl_1264 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Patl_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Patl_2897 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Patl_1564 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Patl_2116 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Patl_2364 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2348 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2503 Exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_0529 Exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_3563 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Patl_1776 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Patl_0663 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:pat03440] D Patl_3712 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Patl_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Patl_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Patl_3710 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Patl_2895 recombination protein RecR K06187 recR; recombination protein RecR D Patl_3259 recA protein K03553 recA; recombination protein RecA D Patl_0015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Patl_2945 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Patl_2944 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Patl_2946 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Patl_0353 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Patl_1757 DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Patl_1756 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Patl_1758 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Patl_1264 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Patl_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Patl_2897 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Patl_1564 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Patl_2116 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Patl_2364 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2348 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2503 Exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_0529 Exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_3563 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Patl_4189 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Patl_4308 hypothetical protein K02317 dnaT; DNA replication protein DnaT C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:pat03250] D Patl_0446 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Patl_1164 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Patl_1023 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus D Patl_1666 peptidase M16-like protein K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pat02010] D Patl_2417 putative nitrate transport protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D Patl_2416 binding-protein-dependent transport systems inner membrane component K15577 nrtB; nitrate/nitrite transport system permease protein D Patl_2415 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D Patl_2154 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Patl_2153 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Patl_2046 ABC transporter related protein K05776 modF; molybdate transport system ATP-binding protein D Patl_1596 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Patl_1597 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Patl_1598 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Patl_4119 mannitol ABC transporter ATP-binding protein / sorbitol ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Patl_1576 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Patl_4116 mannitol-binding protein / sorbitol-binding protein K10227 smoE; polyol transport system substrate-binding protein D Patl_4117 mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein K10228 smoF; polyol transport system permease protein D Patl_4118 mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein K10229 smoG; polyol transport system permease protein D Patl_0558 toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein D Patl_0559 Mammalian cell entry related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Patl_0560 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Patl_0557 anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D Patl_0561 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Patl_3318 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Patl_3317 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Patl_3316 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Patl_3315 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Patl_3006 extracellular solute-binding protein, family 5 K19226 sapA; cationic peptide transport system substrate-binding protein D Patl_3007 binding-protein-dependent transport systems inner membrane component K19227 sapB; cationic peptide transport system permease protein D Patl_3008 binding-protein-dependent transport systems inner membrane component K19228 sapC; cationic peptide transport system permease protein D Patl_3009 oligopeptide/dipeptide ABC transporter, ATPase subunit K19229 sapD; cationic peptide transport system ATP-binding protein D Patl_3010 ABC transporter related protein K19230 sapF; cationic peptide transport system ATP-binding protein D Patl_1133 periplasmic binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D Patl_3238 lipopolysaccharide biosynthesis K10107 kpsE; capsular polysaccharide transport system permease protein D Patl_3240 ABC-2 type transporter K09688 kpsM; capsular polysaccharide transport system permease protein D Patl_3239 ABC transporter related protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D Patl_2950 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D Patl_2951 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Patl_1727 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Patl_2360 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Patl_2361 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Patl_3253 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D D Patl_3254 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D Patl_3255 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D Patl_3256 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Patl_3561 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein D Patl_3560 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein D Patl_0567 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Patl_3946 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Patl_3945 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Patl_1780 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Patl_1701 ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Patl_0591 ABC transporter related protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Patl_2660 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Patl_1456 ABC transporter related protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Patl_1455 ABC transporter related protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:pat02060] D Patl_2509 PTS system D-glucose-specific IIA component, Glc family K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Patl_3845 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Patl_0572 HPr-like nitrogen-regulatory protein NPr K08485 ptsO; phosphocarrier protein NPr D Patl_0570 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:pat03070] D Patl_0430 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Patl_3236 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D Patl_0231 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D Patl_0230 general secretion pathway protein C K02452 gspC; general secretion pathway protein C D Patl_0233 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D Patl_3231 type II secretion system protein K02455 gspF; general secretion pathway protein F D Patl_0234 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Patl_3230 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Patl_3229 Prepilin-type cleavage/methylation K02456 gspG; general secretion pathway protein G D Patl_0235 general secretion pathway protein H K02457 gspH; general secretion pathway protein H D Patl_0236 general secretion pathway protein I K02458 gspI; general secretion pathway protein I D Patl_0237 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J D Patl_3227 Prepilin-type cleavage/methylation K02459 gspJ; general secretion pathway protein J D Patl_3228 Prepilin-type cleavage/methylation K02459 gspJ; general secretion pathway protein J D Patl_0238 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D Patl_3226 hypothetical protein K02460 gspK; general secretion pathway protein K D Patl_0239 general secretion pathway protein L K02461 gspL; general secretion pathway protein L D Patl_0240 General secretion pathway M protein K02462 gspM; general secretion pathway protein M D Patl_0232 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Patl_3232 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Patl_4203 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Patl_1230 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Patl_4204 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Patl_1231 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Patl_0592 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Patl_1575 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Patl_1009 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Patl_1229 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Patl_4312 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Patl_3511 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Patl_3944 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Patl_3614 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Patl_1670 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Patl_4213 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Patl_2610 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Patl_4214 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Patl_2609 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D Patl_4215 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D Patl_2608 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:pat02020] D Patl_1054 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Patl_1053 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Patl_1216 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Patl_3408 alkaline phosphatase D domain protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Patl_2702 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Patl_0777 Twin-arginine translocation pathway signal K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Patl_3318 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Patl_2841 periplasmic sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Patl_2840 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Patl_0226 periplasmic sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Patl_0225 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Patl_0988 periplasmic sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Patl_0987 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Patl_4019 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Patl_1528 periplasmic sensor signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Patl_1527 two component transcriptional regulator, winged helix family K07664 baeR; two-component system, OmpR family, response regulator BaeR D Patl_2393 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Patl_2392 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D Patl_3085 flagellin-like protein K02406 fliC; flagellin D Patl_3052 flagellin-like protein K02406 fliC; flagellin D Patl_3087 flagellin-like protein K02406 fliC; flagellin D Patl_3088 flagellin-like protein K02406 fliC; flagellin D Patl_3030 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Patl_1322 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Patl_3747 PAS/PAC sensor hybrid histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D Patl_0082 two component transcriptional regulator, winged helix family K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D Patl_4239 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Patl_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Patl_3919 periplasmic sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D Patl_3412 periplasmic sensor signal transduction histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D Patl_3411 two component transcriptional regulator, winged helix family K19610 pfeR; two-component system, OmpR family, response regulator PfeR D Patl_2717 Citrate lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Patl_0724 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Patl_1531 UDP-glucose/GDP-mannose dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D Patl_2951 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Patl_2950 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D Patl_2290 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Patl_0507 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Patl_2450 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Patl_3014 carbon storage regulator, CsrA / carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Patl_3874 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Patl_1247 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Patl_3162 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Patl_1027 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Patl_1028 nitrogen metabolism transcriptional regulator, NtrC, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Patl_4201 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_1025 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_1445 short chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter D Patl_2923 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1917 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_0568 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Patl_3344 Prepilin-type cleavage/methylation K02650 pilA; type IV pilus assembly protein PilA D Patl_1601 periplasmic sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Patl_1603 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Patl_3101 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Patl_4181 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_4183 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_3424 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_3464 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_3477 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Patl_0068 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_0520 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_0604 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_0143 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_2247 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Patl_3023 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Patl_3024 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Patl_3027 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Patl_1591 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3029 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3547 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3264 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3629 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3026 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Patl_3102 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Patl_0423 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Patl_2095 response regulator receiver protein K14987 fixJ; two-component system, LuxR family, response regulator FixJ D Patl_2096 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ D Patl_3051 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Patl_3050 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Patl_3049 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Patl_3367 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Patl_2048 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Patl_3369 signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Patl_3370 response regulator receiver protein K15012 regA; two-component system, response regulator RegA D Patl_3701 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Patl_3700 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Patl_3699 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Patl_2073 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Patl_2072 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Patl_2071 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Patl_2070 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Patl_1452 cytochrome bd quinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Patl_1453 cytochrome bd quinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Patl_1454 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Patl_0430 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Patl_1170 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Patl_1706 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Patl_1404 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Patl_0936 putative FecR K07165 fecR; transmembrane sensor D Patl_1521 putative FecR K07165 fecR; transmembrane sensor D Patl_0786 putative FecR K07165 fecR; transmembrane sensor D Patl_2664 GAF sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Patl_1871 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D Patl_1594 response regulator receiver protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D Patl_1593 anti-sigma-factor antagonist K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D Patl_3104 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Patl_3701 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pat02024] D Patl_3978 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Patl_0361 autoinducer synthesis protein K13060 lasI; acyl homoserine lactone synthase [EC:2.3.1.184] D Patl_2829 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Patl_2830 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Patl_3205 rhamnosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D Patl_1587 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Patl_1707 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Patl_1601 periplasmic sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Patl_1603 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Patl_3931 Pyridoxal-dependent decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Patl_3722 signal peptide prediction K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Patl_2658 conserved hypothetical protein K20276 bapA; large repetitive protein D Patl_0322 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_1368 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_2804 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_0998 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_3811 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_3367 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Patl_0247 zinc uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Patl_0297 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Patl_3961 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Patl_1311 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Patl_2771 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Patl_3798 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Patl_3599 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Patl_4312 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Patl_0592 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Patl_1575 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Patl_1009 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Patl_1229 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Patl_3511 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Patl_3944 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Patl_3614 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Patl_1670 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:pat02030] D Patl_4181 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_4183 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_3424 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_3464 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_3477 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Patl_0068 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_0520 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_0604 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_0143 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_2247 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Patl_3027 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Patl_3023 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Patl_3024 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Patl_1591 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3029 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3547 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3264 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3629 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3028 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D Patl_0248 CheC-like protein K03409 cheX; chemotaxis protein CheX D Patl_3026 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Patl_3102 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Patl_3101 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Patl_3046 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Patl_3040 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Patl_3039 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Patl_1322 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Patl_1323 OmpA/MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:pat02040] D Patl_3048 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Patl_3047 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Patl_3046 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Patl_3045 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Patl_3044 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Patl_3043 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Patl_3042 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Patl_3041 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Patl_0065 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Patl_3040 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Patl_3039 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Patl_3038 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D Patl_3037 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Patl_3036 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Patl_3035 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Patl_3033 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Patl_3034 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Patl_3103 flagella basal body P ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Patl_3100 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Patl_3099 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Patl_3098 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Patl_3097 flagellar basal body FlaE K02390 flgE; flagellar hook protein FlgE D Patl_3096 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Patl_3095 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Patl_3094 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Patl_2812 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Patl_3093 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Patl_3092 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Patl_3091 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Patl_3090 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Patl_3106 protein of unknown function DUF400 K09860 flgP; outer membrane protein FlgP D Patl_0993 Sel1-like repeat K21217 motX; sodium-type polar flagellar protein MotX D Patl_1400 OmpA/MotB K21218 motY; sodium-type flagellar protein MotY D Patl_3085 flagellin-like protein K02406 fliC; flagellin D Patl_3052 flagellin-like protein K02406 fliC; flagellin D Patl_3087 flagellin-like protein K02406 fliC; flagellin D Patl_3088 flagellin-like protein K02406 fliC; flagellin D Patl_3083 flagellar hook-associated 2-like protein K02407 fliD; flagellar hook-associated protein 2 D Patl_3082 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Patl_1322 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Patl_1323 OmpA/MotB K02557 motB; chemotaxis protein MotB D Patl_3104 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Patl_3105 FlgN K02399 flgN; flagellar biosynthesis protein FlgN D Patl_1038 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Patl_3051 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Patl_0568 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Patl_3049 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Patl_3030 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Patl_3266 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:pat01501] D Patl_3834 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Patl_1716 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Patl_4162 glycoside hydrolase, family 3-like protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Patl_3874 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Patl_3800 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_1036 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_2229 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_3799 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Patl_1037 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Patl_3798 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Patl_3599 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Patl_0430 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Patl_0723 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Patl_1560 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Patl_3525 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:pat01502] D Patl_3517 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Patl_4025 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Patl_3523 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Patl_3522 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Patl_3519 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pat01503] D Patl_2841 periplasmic sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Patl_2840 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Patl_3435 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Patl_3006 extracellular solute-binding protein, family 5 K19226 sapA; cationic peptide transport system substrate-binding protein D Patl_3007 binding-protein-dependent transport systems inner membrane component K19227 sapB; cationic peptide transport system permease protein D Patl_3008 binding-protein-dependent transport systems inner membrane component K19228 sapC; cationic peptide transport system permease protein D Patl_3009 oligopeptide/dipeptide ABC transporter, ATPase subunit K19229 sapD; cationic peptide transport system ATP-binding protein D Patl_3010 ABC transporter related protein K19230 sapF; cationic peptide transport system ATP-binding protein D Patl_0988 periplasmic sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Patl_0987 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Patl_3975 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Patl_4019 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Patl_3575 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Patl_0446 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Patl_1164 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Patl_1023 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Patl_3800 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_1036 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_2229 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_3799 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Patl_1037 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Patl_0430 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Patl_1261 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pat01000] C 01001 Protein kinases [BR:pat01001] D Patl_3392 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Patl_0961 serine/threonine protein kinase with TPR repeats K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Patl_0402 lysine decarboxylase transcriptional regulator, CadC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Patl_4000 Protein-tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D Patl_1073 Protein-tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D Patl_3807 phage integrase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D Patl_1168 Protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Patl_1054 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Patl_2841 periplasmic sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Patl_0226 periplasmic sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Patl_0988 periplasmic sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Patl_1528 periplasmic sensor signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Patl_3747 PAS/PAC sensor hybrid histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D Patl_3919 periplasmic sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D Patl_3412 periplasmic sensor signal transduction histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D Patl_3572 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Patl_0643 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Patl_2302 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Patl_0507 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Patl_2291 periplasmic sensor signal transduction histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D Patl_2386 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Patl_1027 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Patl_1601 periplasmic sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Patl_1533 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Patl_1535 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Patl_0765 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Patl_3027 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Patl_0423 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Patl_3050 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Patl_3369 signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Patl_2664 GAF sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Patl_1871 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D Patl_4293 multi-sensor hybrid histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS D Patl_2082 histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Patl_3915 periplasmic sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Patl_3604 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:pat01009] D Patl_2592 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Patl_2894 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Patl_1278 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:pat01002] D Patl_3177 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] D Patl_3342 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Patl_3119 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Patl_1609 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Patl_3748 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Patl_3881 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Patl_4173 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Patl_0131 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Patl_1194 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Patl_2955 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Patl_3430 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124] D Patl_2212 ThiJ/PfpI K05520 yhbO; deglycase [EC:3.5.1.124] D Patl_3923 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Patl_1496 Abortive infection protein K07052 K07052; CAAX protease family protein D Patl_3840 Abortive infection protein K07052 K07052; CAAX protease family protein D Patl_3111 peptidase M1, membrane alanine aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] D Patl_1996 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Patl_4207 oligopeptidase A, Metallo peptidase, MEROPS family M03A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D Patl_1586 peptidyl-dipeptidase Dcp, Metallo peptidase, MEROPS family M03A K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D Patl_2786 peptidyl-dipeptidase Dcp, Metallo peptidase, MEROPS family M03A K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D Patl_3353 endothelin-converting enzyme, Metallo peptidase, MEROPS family M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D Patl_1666 peptidase M16-like protein K01408 IDE; insulysin [EC:3.4.24.56] D Patl_1365 peptidase M16-like protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Patl_3562 aminopeptidase A, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Patl_3939 aminopeptidase B, Metallo peptidase, MEROPS family M17 K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D Patl_3688 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Patl_0941 peptidase M19, renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Patl_1297 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D Patl_2192 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Patl_4262 peptidase M20 K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-] D Patl_1518 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D Patl_2051 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9] D Patl_1248 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Patl_1471 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Patl_0199 Xaa-Pro dipeptidase, Metallo peptidase, MEROPS family M24B K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Patl_3777 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Patl_3488 Twin-arginine translocation pathway signal K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Patl_3502 aminopeptidase P, Metallo peptidase, MEROPS family M24B K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Patl_1571 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Patl_0373 Heat shock protein, Metallo peptidase, MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Patl_2482 peptidase M48, Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D Patl_1256 site-2 protease, Metallo peptidase, MEROPS family M50B K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Patl_0929 protein of unknown function DUF980 K09933 mtfA; MtfA peptidase D Patl_4019 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Patl_0554 DegS peptidase, Serine peptidase, MEROPS family S01B K04691 hhoB; serine protease DegS [EC:3.4.21.-] D Patl_2782 prolyl oligopeptidase, Serine peptidase, MEROPS family S09A K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D Patl_3968 dipeptidyl-peptidase IV, Serine peptidase, MEROPS family S09B K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D Patl_1556 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Patl_4160 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D Patl_3136 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Patl_3134 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Patl_4247 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Patl_2345 putative prophage repressor K03503 umuD; DNA polymerase V [EC:3.4.21.-] D Patl_2309 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Patl_3150 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Patl_3951 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Patl_1919 alpha/beta hydrolase fold familiy K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-] D Patl_1993 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Patl_0479 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Patl_2367 signal peptide peptidase A, Serine peptidase, MEROPS family S49 K04773 sppA; protease IV [EC:3.4.21.-] D Patl_2181 inner membrane peptidase, Serine peptidase, MEROPS family S49 K04774 sohB; serine protease SohB [EC:3.4.21.-] D Patl_1809 alpha-aspartyl dipeptidase, Serine peptidase, MEROPS family S51 K05995 pepE; dipeptidase E [EC:3.4.13.21] D Patl_0064 Rhomboid-like protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D Patl_4176 peptidase U61, LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Patl_4191 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Patl_1885 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Patl_3459 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Patl_2054 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D Patl_0193 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 K03592 pmbA; PmbA protein D Patl_0190 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 K03568 tldD; TldD protein D Patl_3490 Twin-arginine translocation pathway signal K03568 tldD; TldD protein D Patl_3981 protease FtsH subunit HflC K04087 hflC; modulator of FtsH protease HflC D Patl_3980 protease FtsH subunit HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:pat01003] D Patl_1191 glycosyl transferase, group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D Patl_0080 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21] D Patl_0489 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Patl_0723 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Patl_3243 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Patl_2792 glucosyltransferase for synthesis of periplasmic glucans K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D Patl_1086 hypothetical protein K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251] D Patl_1188 glycosyl transferase, group 1 K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251] D Patl_2163 glycosyltransferase involved in cell wall biogenesis K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pat01005] D Patl_1261 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Patl_1262 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Patl_3513 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Patl_1259 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Patl_1886 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Patl_1781 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Patl_3603 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Patl_2723 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Patl_0057 Three-deoxy-D-manno-octulosonic-acid transferase-like protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Patl_3668 conserved protein of unknown function; putative secreted protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D Patl_0942 conserved protein of unknown function; putative secreted protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D Patl_3435 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Patl_0055 lipopolysaccharide kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D Patl_2205 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Patl_1783 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Patl_0564 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Patl_0563 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Patl_0056 glycosyl transferase, group 1 K12989 lpcC; mannosyltransferase [EC:2.4.1.-] D Patl_3205 rhamnosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D Patl_3243 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pat01011] D Patl_0555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Patl_3999 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Patl_3518 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Patl_3521 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Patl_3524 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Patl_3517 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Patl_4025 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Patl_4176 peptidase U61, LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Patl_3522 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Patl_3519 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Patl_1046 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Patl_4071 phosphoesterase, PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Patl_3180 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Patl_0723 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Patl_0489 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Patl_1560 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Patl_3525 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Patl_1556 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Patl_4160 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D Patl_3923 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Patl_0200 Lytic transglycosylase, catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Patl_1558 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Patl_2801 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Patl_3432 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Patl_1894 Lytic transglycosylase, catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Patl_3114 Lytic transglycosylase, catalytic K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D Patl_2118 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Patl_1557 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Patl_3975 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Patl_3347 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:pat01004] D Patl_2123 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Patl_2124 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Patl_3779 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180] D Patl_3383 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Patl_2120 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Patl_2122 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_0769 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_0952 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3071 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_4046 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3661 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_3641 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Patl_2009 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Patl_1260 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Patl_0922 2-nitropropane dioxygenase, NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D Patl_0451 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Patl_2914 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Patl_2041 Palmitoyl-CoA hydrolase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D Patl_0385 thioesterase superfamily K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D Patl_4032 Delta-9 acyl-phospholipid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D Patl_0521 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Patl_0322 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_1368 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_2804 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_0998 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_3811 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_0154 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Patl_4248 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Patl_2125 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Patl_1043 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Patl_1030 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:pat01008] D Patl_0462 beta-lactamase-like protein K05555 actIV; cyclase [EC:4.-.-.-] D Patl_2274 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D Patl_0005 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:pat01006] D Patl_1320 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Patl_3739 Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Patl_1253 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Patl_3977 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Patl_0067 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Patl_1294 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Patl_4238 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:pat01007] D Patl_2919 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Patl_2184 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Patl_3936 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Patl_0514 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Patl_0658 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Patl_1888 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Patl_1359 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Patl_1897 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Patl_3178 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Patl_3564 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Patl_1566 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Patl_1361 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Patl_2948 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Patl_1879 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Patl_3125 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Patl_0009 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Patl_0008 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Patl_2456 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Patl_1276 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Patl_2499 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Patl_3015 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Patl_2495 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Patl_2494 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Patl_4016 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Patl_2034 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Patl_2882 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Patl_0061 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Patl_2556 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Patl_3628 aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Patl_0163 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Patl_0651 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Patl_2558 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Patl_0495 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Patl_4024 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Patl_2886 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Patl_2043 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Patl_2469 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Patl_2052 aminotransferase, class V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D Patl_3059 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:pat00194] D Patl_4294 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Patl_2669 H+-transporting two-sector ATPase, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Patl_4295 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Patl_2668 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Patl_4296 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Patl_2676 H+-transporting two-sector ATPase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Patl_4297 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Patl_2675 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Patl_4298 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Patl_4299 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Patl_2674 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Patl_4300 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Patl_2673 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Patl_4301 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Patl_2672 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Patl_4302 ATP synthase I chain K02116 atpI; ATP synthase protein I D Patl_2670 F0F1-ATPase subunit, putative K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pat03000] D Patl_4096 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Patl_0727 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Patl_3892 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D Patl_1909 transcriptional regulator, AraC family K25495 nimR; AraC family transcriptional regulator, regulator of nimT D Patl_1272 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator D Patl_0818 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Patl_3875 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Patl_2203 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Patl_0997 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Patl_4254 transcriptional regulator, LysR family K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D Patl_3916 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D Patl_4198 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D Patl_4014 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Patl_3312 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Patl_1624 transcriptional regulator, LysR family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D Patl_0866 transcriptional regulator, LysR family K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator D Patl_0846 transcriptional regulator, LysR family K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator D Patl_0853 transcriptional regulator, LysR family K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator D Patl_1621 transcriptional regulator, LysR family K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D Patl_3891 transcriptional regulator, LysR family K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway D Patl_1719 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Patl_2656 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Patl_1121 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Patl_2962 transcriptional regulator, LysR family K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D Patl_0114 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Patl_2681 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Patl_3724 transcriptional regulator, AraC family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Patl_2679 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Patl_0292 transcriptional regulator, LacI family K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D Patl_2691 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Patl_3272 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Patl_0121 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Patl_1020 transcriptional regulator, histidine utilization repressor, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D Patl_2860 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Patl_2768 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Patl_2794 transcriptional regulator, GntR family K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D Patl_3349 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Patl_0894 transcriptional regulator, GntR family K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor D Patl_0845 transcriptional regulator, GntR family K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator D Patl_2589 transcriptional regulator, TetR family K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D Patl_0044 cell division inhibitor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D Patl_2423 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Patl_3905 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Patl_0736 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D Patl_2638 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Patl_4127 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Patl_3670 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Patl_1288 transcriptional regulator, TetR family K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon D Patl_0743 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D Patl_0208 transcriptional regulator, TetR family K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor D Patl_4031 transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D Patl_2217 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_2461 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_1480 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_0500 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_0409 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_3465 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_1883 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D Patl_2996 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D Patl_3626 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D Patl_0100 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Patl_2868 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Patl_0905 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Patl_2090 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D Patl_1582 transcriptional regulator, MerR family K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D Patl_2152 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Patl_0247 zinc uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Patl_0297 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Patl_2326 transcriptional regulator, IclR family K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor D Patl_3367 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Patl_2085 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Patl_2699 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Patl_1237 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Patl_3398 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Patl_2105 transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D Patl_0969 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D Patl_3998 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Patl_0269 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Patl_1353 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Patl_3051 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Patl_3475 transcriptional regulator, NifA subfamily, Fis family K12266 norR; anaerobic nitric oxide reductase transcription regulator D Patl_1413 virulence gene repressor RsaL K07726 K07726; putative transcriptional regulator D Patl_3446 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator D Patl_3871 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Patl_3956 methionine repressor, MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D Patl_2218 L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Patl_1873 FMN-binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Patl_0449 transcriptional regulator, BolA protein family K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D Patl_4303 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Patl_0538 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism D Patl_2998 transcriptional regulator, TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D Patl_2479 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D Patl_3911 PaaX-like protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D Patl_3005 sigma54 specific transcriptional regulator, Fis family K03974 pspF; psp operon transcriptional activator D Patl_3002 phage shock protein C, PspC K03973 pspC; phage shock protein C D Patl_0287 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase D Patl_2431 negative transcriptional regulator K07734 paiB; transcriptional regulator D Patl_1153 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator D Patl_3937 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Patl_1310 Ribonucleotide reductase regulator NrdR-like protein K07738 nrdR; transcriptional repressor NrdR D Patl_3528 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:pat03021] D Patl_1014 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Patl_0598 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Patl_0599 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Patl_0348 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Patl_1038 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Patl_3864 RNA polymerase, sigma 38 subunit, RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D Patl_1656 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Patl_2079 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Patl_3538 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Patl_3742 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Patl_3155 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Patl_3311 RNA polymerase, sigma subunit, SigV K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Patl_1332 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Patl_3948 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor D Patl_0568 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Patl_3030 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Patl_3830 SNF2-related protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D Patl_1694 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Patl_1315 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Patl_0593 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Patl_3698 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A D Patl_3697 Stringent starvation protein B K03600 sspB; stringent starvation protein B D Patl_3154 anti sigma-E protein, RseA K03597 rseA; sigma-E factor negative regulatory protein RseA D Patl_3153 sigma E regulatory protein, MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB D Patl_3152 positive regulator of sigma(E), RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC D Patl_3937 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Patl_2213 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Patl_0107 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D Patl_4223 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Patl_1671 transcriptional antiterminator, Rof K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:pat03019] D Patl_2134 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Patl_0187 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D Patl_3149 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Patl_0994 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Patl_3785 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Patl_3481 Exonuclease, RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-] D Patl_4221 DEAD/DEAH box helicase-like protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Patl_2135 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Patl_2330 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Patl_2438 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Patl_0418 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Patl_0252 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Patl_0617 ATP-dependent DNA helicase, RecQ-like protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Patl_3266 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Patl_1632 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Patl_4223 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Patl_2592 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Patl_1987 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Patl_3753 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Patl_3978 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Patl_3322 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Patl_3935 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Patl_3846 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Patl_3014 carbon storage regulator, CsrA / carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Patl_4070 regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A D Patl_1031 protein of unknown function DUF1260 K09893 rraB; regulator of ribonuclease activity B D Patl_0571 Uncharacterized P-loop ATPase protein UPF0042 K06958 rapZ; RNase adapter protein RapZ D Patl_2170 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D Patl_0488 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:pat03011] D Patl_2466 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Patl_1249 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Patl_0475 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Patl_1013 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Patl_1006 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Patl_3746 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D Patl_0601 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Patl_1003 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Patl_3702 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Patl_0468 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Patl_1012 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Patl_0600 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Patl_1011 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Patl_1002 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Patl_1698 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Patl_1577 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Patl_0478 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Patl_3745 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Patl_0473 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Patl_3181 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Patl_1041 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Patl_0595 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Patl_0472 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Patl_0469 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Patl_0470 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Patl_1001 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Patl_1004 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Patl_3744 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Patl_0596 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Patl_0594 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Patl_0597 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Patl_3703 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Patl_0999 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Patl_1008 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Patl_0476 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Patl_1015 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Patl_1005 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Patl_1580 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Patl_2496 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Patl_3738 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Patl_0474 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Patl_0471 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Patl_1000 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Patl_3737 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Patl_0048 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Patl_0477 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Patl_1007 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Patl_4188 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Patl_2126 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Patl_0049 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Patl_4315 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Patl_2497 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Patl_1010 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Patl_2569 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Patl_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0079 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0023 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0083 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pat03009] D Patl_3149 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Patl_3392 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Patl_3481 Exonuclease, RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-] D Patl_3148 GTP-binding protein Era K03595 era; GTPase D Patl_3736 GTP1/OBG subdomain K03979 obgE; GTPase [EC:3.6.5.-] D Patl_3937 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Patl_1694 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Patl_1315 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Patl_0593 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Patl_3469 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Patl_3421 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Patl_0021 16S rRNA m(5)C-967 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Patl_0079 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Patl_3943 16S rRNA m(2)G-966 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Patl_3334 16S rRNA m(3)U-1498 methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Patl_4305 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Patl_3527 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Patl_3692 Protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Patl_0354 protein of unknown function DUF548 K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D Patl_3381 23S rRNA m(1)G-745 methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Patl_0995 23S rRNA Gm-2251 2'-O-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Patl_1570 23S rRNA Um-2552 2'-O-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Patl_1583 23S rRNA m(6)A-1618 methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D Patl_0447 23S rRNA m(2)G-1835 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D Patl_1561 23S rRNA (pseudouridine-1915-N(3)-) methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Patl_2168 23S rRNA m(5)C-1962 methyltransferase / SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Patl_2039 protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D Patl_2005 23S rRNA m(2)G-2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D Patl_2200 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D Patl_3129 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Patl_2328 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Patl_3831 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Patl_1363 pseudouridine synthase Rlu family protein, TIGR01621 K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Patl_1630 Pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Patl_2824 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Patl_2133 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Patl_1335 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Patl_2378 ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D Patl_1646 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D Patl_1349 [SSU ribosomal protein S18P]-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Patl_3666 SSU ribosomal protein S6P modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Patl_2779 SSU ribosomal protein S6P modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Patl_1578 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Patl_1834 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Patl_0092 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Patl_1540 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D Patl_2383 Cupin 4 K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D Patl_2134 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Patl_0187 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D Patl_1154 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Patl_0588 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D Patl_0418 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Patl_3284 DEAD/DEAH box helicase-like protein K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D Patl_3482 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Patl_3122 small GTP-binding protein K03977 engA; GTPase D Patl_3634 Ras superfamily GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A D Patl_3979 GTP-binding protein HflX K03665 hflX; GTPase D Patl_0028 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Patl_0349 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Patl_1696 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Patl_1693 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Patl_1562 iojap-like protein K09710 ybeB; ribosome-associated protein D Patl_2208 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Patl_1569 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Patl_0192 protein of unknown function DUF615 K09889 yjgA; ribosome-associated protein D Patl_2008 ribosome modulation factor K03812 rmf; ribosome modulation factor D Patl_0569 SSU ribosomal protein S30P K05808 hpf; ribosome hibernation promoting factor D Patl_1876 SSU ribosomal protein S30P K05809 raiA; ribosome-associated inhibitor A D Patl_2571 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Patl_2127 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:pat03016] D Patl_3282 metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Patl_2919 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Patl_1276 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Patl_3178 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Patl_1566 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Patl_1897 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Patl_2184 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Patl_1359 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Patl_1361 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Patl_2948 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Patl_3015 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Patl_1879 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Patl_2499 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Patl_2456 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Patl_1888 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Patl_3564 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Patl_3125 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Patl_2495 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Patl_2494 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Patl_0514 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Patl_0658 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Patl_3950 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Patl_1047 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Patl_0078 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Patl_3929 putative methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Patl_1277 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Patl_1604 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Patl_1697 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Patl_3859 Pseudouridylate synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Patl_1238 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Patl_0028 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Patl_3977 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Patl_4310 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Patl_4306 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Patl_1649 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Patl_0137 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Patl_4314 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Patl_R0014 rnpB; RNase_P_RNA K01978 rnpB; M1 RNA D Patl_1399 RNAse T K03683 rnt; ribonuclease T [EC:3.1.13.-] D Patl_4282 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Patl_2803 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D Patl_0487 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Patl_1296 ABC transporter related protein K06020 ettA; energy-dependent translational throttle protein EttA D Patl_0009 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Patl_0008 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Patl_3936 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Patl_3500 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Patl_3115 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Patl_4051 tRNA-U16,U17-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D Patl_0270 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Patl_2915 tRNA-U20a,U20b-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D Patl_2206 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Patl_4027 putative methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Patl_4026 putative methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D Patl_2177 Methyltransferase type 11 K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D Patl_4030 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D Patl_1579 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Patl_0351 tRNA (guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D Patl_1235 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D Patl_0990 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Patl_3970 methyltransferase small K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D Patl_3184 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D Patl_2328 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Patl_3831 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Patl_1363 pseudouridine synthase Rlu family protein, TIGR01621 K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Patl_1630 Pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Patl_2379 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Patl_2064 tRNA s(2)C-32 sulfurtransferase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Patl_4280 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Patl_2454 DsrH family protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Patl_2453 DsrE-like protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D Patl_2452 DsrE-like protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Patl_2455 DsrC-like protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Patl_1240 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D Patl_3160 glycine cleavage T protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ D Patl_1614 tRNA-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D Patl_3384 protein of unknown function DUF752 K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D Patl_1227 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Patl_2961 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Patl_2960 Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Patl_3193 GTP cyclohydrolase I K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Patl_3972 putative iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Patl_1228 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Patl_1266 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Patl_1341 tRNA(Met)-cytidine N(4)-acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D Patl_2808 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Patl_1042 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Patl_3974 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Patl_1791 UBA/THIF-type NAD/FAD binding fold familiy K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Patl_0994 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Patl_3785 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Patl_1632 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:pat03012] D Patl_1592 translation initiation factor 1 (eIF-1/SUI1) K03113 EIF1; translation initiation factor 1 D Patl_1695 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Patl_2498 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Patl_0112 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Patl_1250 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Patl_0603 translation elongation factor Tu K02358 tuf; elongation factor Tu D Patl_3996 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Patl_0464 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Patl_0602 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Patl_2563 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1 D Patl_1252 ribosome recycling factor K02838 frr; ribosome recycling factor D Patl_2562 [protein release factor]-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Patl_2570 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Patl_2373 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D Patl_2524 translation elongation factor P (EF-P) K02356 efp; elongation factor P D Patl_0441 translation elongation factor P (EF-P) K02356 efp; elongation factor P D Patl_0442 lysyl-tRNA synthetase-related protein GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D Patl_0440 L-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D Patl_3387 protein of unknown function DUF462 K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D Patl_1360 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 D Patl_1358 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3 D Patl_2836 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:pat03110] D Patl_2374 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Patl_1337 ATPase AAA-2 K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Patl_3135 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Patl_4192 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Patl_2894 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Patl_1987 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Patl_1242 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D Patl_0780 conserved hypothetical protein K04046 yegD; hypothetical chaperone protein D Patl_2983 putative heat shock protein 70 family protein K04046 yegD; hypothetical chaperone protein D Patl_3753 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Patl_1988 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Patl_2100 heat shock protein DnaJ-like protein K05516 cbpA; curved DNA-binding protein D Patl_3415 heat shock protein DnaJ-like protein K05801 djlA; DnaJ like chaperone protein D Patl_1241 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Patl_0227 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Patl_1986 GrpE protein K03687 GRPE; molecular chaperone GrpE D Patl_3582 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Patl_2891 heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA D Patl_0228 heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D Patl_3752 chaperonin Cpn10 K04078 groES; chaperonin GroES D Patl_4019 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Patl_1571 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Patl_4301 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Patl_2672 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Patl_3614 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Patl_0986 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D Patl_2300 protein of unknown function, Spy-related protein K06006 cpxP; periplasmic protein CpxP/Spy D Patl_4042 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A D Patl_0446 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Patl_1164 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Patl_1023 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Patl_1887 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Patl_3132 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Patl_0108 Peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D Patl_0607 peptidylprolyl isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D Patl_3176 peptidylprolyl isomerase, FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D Patl_3161 peptidylprolyl isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Patl_1568 peptidylprolyl isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Patl_1684 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Patl_3419 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Patl_4222 thioredoxin K03671 TXN; thioredoxin D Patl_1907 Thioredoxin domain K03671 TXN; thioredoxin D Patl_0420 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D Patl_0272 Thioredoxin domain K05838 ybbN; putative thioredoxin D Patl_3458 Glutaredoxin, GrxB family K03675 grxB; glutaredoxin 2 D Patl_3613 glutaredoxin 3 K03676 grxC; glutaredoxin 3 D Patl_1396 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin D Patl_3575 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Patl_2796 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D Patl_3713 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Patl_0084 Protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D Patl_3250 periplasmic protein thiol--disulfide oxidoreductase DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:pat04131] D Patl_3732 Phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D Patl_3130 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Patl_2409 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Patl_3327 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Patl_1634 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Patl_1640 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Patl_2596 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Patl_2593 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Patl_0968 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Patl_2894 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:pat04121] C 03051 Proteasome [BR:pat03051] D Patl_2894 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:pat03032] D Patl_2365 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Patl_4096 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Patl_0727 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Patl_3133 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Patl_2493 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Patl_2465 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Patl_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Patl_0251 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Patl_4307 hypothetical protein K02315 dnaC; DNA replication protein DnaC D Patl_1039 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Patl_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Patl_1264 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Patl_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Patl_3563 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Patl_1564 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Patl_2116 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Patl_2364 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2348 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2503 Exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_0529 Exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2897 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Patl_1263 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Patl_0015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Patl_1776 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Patl_0663 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Patl_2199 negative regulator of replication initiation K03645 seqA; negative modulator of initiation of replication D Patl_2487 regulatory inactivation of DnaA Hda protein K10763 hda; DnaA-homolog protein D Patl_2470 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Patl_0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Patl_0509 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Patl_0435 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Patl_2356 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Patl_2853 conserved hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Patl_0776 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:pat03036] D Patl_4096 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Patl_0727 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Patl_3149 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Patl_3327 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Patl_2148 histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS D Patl_3133 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Patl_2493 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Patl_2465 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Patl_2100 heat shock protein DnaJ-like protein K05516 cbpA; curved DNA-binding protein D Patl_2099 conserved hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM D Patl_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Patl_3695 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D Patl_3841 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein D Patl_0269 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Patl_3978 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Patl_2217 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_2461 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_1480 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_0500 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_0409 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_3465 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Patl_3378 37 kDa nucleoid-associated protein K06899 ndpA; nucleoid-associated protein D Patl_1774 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Patl_2826 condensin subunit ScpA K05896 scpA; segregation and condensation protein A D Patl_2825 condensin subunit ScpB K06024 scpB; segregation and condensation protein B D Patl_3515 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Patl_3856 cell division protein FtsB K05589 ftsB; cell division protein FtsB D Patl_3945 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Patl_3525 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Patl_2460 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Patl_3526 cell division protein FtsL K03586 ftsL; cell division protein FtsL D Patl_4190 Sporulation related protein K03591 ftsN; cell division protein FtsN D Patl_3516 Polypeptide-transport-associated, FtsQ-type K03589 ftsQ; cell division protein FtsQ D Patl_3520 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D Patl_3946 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Patl_3514 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Patl_1775 cell division protein ZipA K03528 zipA; cell division protein ZipA D Patl_0692 phage transcriptional activator, Ogr/delta K09888 zapA; cell division protein ZapA D Patl_2004 protein of unknown function DUF1379 K18657 zapC; cell division protein ZapC D Patl_3340 protein of unknown function DUF1342 K18778 zapD; cell division protein ZapD D Patl_2704 AFG1-like ATPase K06916 zapE; cell division protein ZapE D Patl_0551 AFG1-like ATPase K06916 zapE; cell division protein ZapE D Patl_3975 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Patl_3800 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_1036 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_2229 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_0925 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Patl_0926 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Patl_0927 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Patl_0044 cell division inhibitor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D Patl_2199 negative regulator of replication initiation K03645 seqA; negative modulator of initiation of replication D Patl_0183 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Patl_0184 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Patl_0185 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Patl_1559 cell elongation-specific peptidoglycan biosynthesis regulator RodA K05837 rodA; rod shape determining protein RodA D Patl_4304 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Patl_3025 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Patl_4303 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Patl_0509 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Patl_0435 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Patl_4306 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Patl_4305 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Patl_4076 tyrosine recombinase XerC subunit K03733 xerC; integrase/recombinase XerC D Patl_3714 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Patl_1898 conserved hypothetical Mrp protein (ATPases involved in chromosome partitioning) K03593 mrp; ATP-binding protein involved in chromosome partitioning D Patl_0014 cell division checkpoint GTPase YihA K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:pat03400] D Patl_3876 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Patl_2179 deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Patl_0151 deoxyribodipyrimidine photo-lyase family protein (cryptochrome) K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Patl_3577 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Patl_0076 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Patl_2971 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Patl_0244 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1] D Patl_3510 8-oxo-dGTPase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Patl_3729 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Patl_4163 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Patl_2797 deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D Patl_3875 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Patl_0010 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Patl_0051 Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Patl_2648 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Patl_3712 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Patl_1776 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Patl_0015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Patl_0146 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Patl_1839 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Patl_2963 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Patl_2449 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Patl_4079 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Patl_0732 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Patl_0598 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Patl_0599 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Patl_1014 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Patl_0348 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Patl_1725 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Patl_3263 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Patl_3976 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Patl_3848 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D Patl_2172 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Patl_3121 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Patl_1321 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Patl_1264 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Patl_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Patl_3563 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Patl_1564 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Patl_2116 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Patl_2364 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2348 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2503 Exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_0529 Exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Patl_2897 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Patl_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Patl_0663 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Patl_1757 DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Patl_1756 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Patl_1758 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Patl_3259 recA protein K03553 recA; recombination protein RecA D Patl_2945 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Patl_2944 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Patl_2946 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Patl_4189 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Patl_4308 hypothetical protein K02317 dnaT; DNA replication protein DnaT D Patl_3443 SMC protein-like protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Patl_1645 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Patl_3442 Exodeoxyribonuclease I subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D Patl_1280 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Patl_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Patl_0353 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Patl_3710 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Patl_2895 recombination protein RecR K06187 recR; recombination protein RecR D Patl_1714 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Patl_1051 putative exonuclease, RdgC K03554 rdgC; recombination associated protein RdgC D Patl_3456 type III restriction enzyme, res subunit K19789 radD; DNA repair protein RadD D Patl_2470 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Patl_0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Patl_2356 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Patl_2853 conserved hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Patl_3133 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Patl_0269 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Patl_2493 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Patl_2465 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Patl_0252 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Patl_0617 ATP-dependent DNA helicase, RecQ-like protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Patl_2148 histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS D Patl_0460 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Patl_2344 DNA-directed DNA polymerase K03502 umuC; DNA polymerase V D Patl_2345 putative prophage repressor K03503 umuD; DNA polymerase V [EC:3.4.21.-] D Patl_4247 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Patl_3630 DNA damage-inducible DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D Patl_0035 conserved hypothetical protein K14161 imuB; protein ImuB D Patl_3016 regulatory protein RecX K03565 recX; regulatory protein D Patl_0070 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D Patl_2269 UvrD/REP helicase K03658 helD; DNA helicase IV [EC:5.6.2.4] D Patl_2809 Helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Patl_2473 ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Patl_2474 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:pat03029] D Patl_3700 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Patl_1695 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Patl_2498 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Patl_1250 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Patl_0603 translation elongation factor Tu K02358 tuf; elongation factor Tu D Patl_3996 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Patl_0464 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Patl_0602 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Patl_3148 GTP-binding protein Era K03595 era; GTPase D Patl_0514 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Patl_1566 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Patl_2948 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Patl_1359 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Patl_3426 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Patl_0924 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D Patl_0573 endonuclease K01173 ENDOG; endonuclease G, mitochondrial D Patl_0148 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Patl_1257 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D Patl_1987 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Patl_1986 GrpE protein K03687 GRPE; molecular chaperone GrpE D Patl_3753 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Patl_3752 chaperonin Cpn10 K04078 groES; chaperonin GroES D Patl_1988 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Patl_1238 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Patl_1241 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Patl_1396 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin D Patl_1898 conserved hypothetical Mrp protein (ATPases involved in chromosome partitioning) K03593 mrp; ATP-binding protein involved in chromosome partitioning D Patl_1294 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Patl_4238 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Patl_4244 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D Patl_4239 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Patl_4312 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Patl_4241 conserved hypothetical protein K14998 SURF1; surfeit locus 1 family protein D Patl_4237 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D Patl_2894 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pat02000] D Patl_1780 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Patl_1701 ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Patl_0591 ABC transporter related protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Patl_3434 lipid A ABC exporter family, fused ATPase and inner membrane subunits K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Patl_2660 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Patl_1456 ABC transporter related protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Patl_1455 ABC transporter related protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Patl_2006 ABC transporter related protein K15738 uup; ABC transport system ATP-binding/permease protein D Patl_0282 toxin secretion ABC transporter ATP-binding protein K02021 ABC.MR; putative ABC transport system ATP-binding protein D Patl_2154 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Patl_2153 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Patl_2046 ABC transporter related protein K05776 modF; molybdate transport system ATP-binding protein D Patl_2417 putative nitrate transport protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D Patl_2416 binding-protein-dependent transport systems inner membrane component K15577 nrtB; nitrate/nitrite transport system permease protein D Patl_2415 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D Patl_1596 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Patl_1597 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Patl_1598 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Patl_3722 signal peptide prediction K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Patl_0393 ABC transporter, periplasmic substrate-binding protein, putative K05777 ynjB; putative thiamine transport system substrate-binding protein D Patl_0392 ABC transporter, permease protein, putative K05778 ynjC; putative thiamine transport system permease protein D Patl_0391 ABC transporter related protein K05779 ynjD; putative thiamine transport system ATP-binding protein D Patl_1864 putative sulfonate ABC transporter, periplasmic sulfonate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Patl_1865 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Patl_1866 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Patl_4119 mannitol ABC transporter ATP-binding protein / sorbitol ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Patl_1576 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Patl_4116 mannitol-binding protein / sorbitol-binding protein K10227 smoE; polyol transport system substrate-binding protein D Patl_4117 mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein K10228 smoF; polyol transport system permease protein D Patl_4118 mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein K10229 smoG; polyol transport system permease protein D Patl_0559 Mammalian cell entry related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Patl_0560 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Patl_0561 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Patl_0558 toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein D Patl_0557 anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D Patl_2572 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Patl_3985 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Patl_3318 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Patl_3317 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Patl_3316 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Patl_3315 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Patl_2337 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Patl_0586 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Patl_3279 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Patl_0585 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Patl_1807 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Patl_2540 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Patl_1924 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Patl_0372 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Patl_3006 extracellular solute-binding protein, family 5 K19226 sapA; cationic peptide transport system substrate-binding protein D Patl_3007 binding-protein-dependent transport systems inner membrane component K19227 sapB; cationic peptide transport system permease protein D Patl_3008 binding-protein-dependent transport systems inner membrane component K19228 sapC; cationic peptide transport system permease protein D Patl_3009 oligopeptide/dipeptide ABC transporter, ATPase subunit K19229 sapD; cationic peptide transport system ATP-binding protein D Patl_3010 ABC transporter related protein K19230 sapF; cationic peptide transport system ATP-binding protein D Patl_1488 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein D Patl_1489 transport system permease protein K25133 hmuU; heme transport system permease protein D Patl_1490 ABC transporter related protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D Patl_1140 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Patl_1141 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Patl_1133 periplasmic binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D Patl_3240 ABC-2 type transporter K09688 kpsM; capsular polysaccharide transport system permease protein D Patl_3238 lipopolysaccharide biosynthesis K10107 kpsE; capsular polysaccharide transport system permease protein D Patl_3239 ABC transporter related protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D Patl_3561 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein D Patl_3560 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein D Patl_0567 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Patl_2950 ABC-type Na+ efflux pump, permease component K09696 natB; sodium transport system permease protein D Patl_2951 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Patl_3143 ABC-2 type transporter K25151 gldF; gliding motility-associated transport system permease protein D Patl_3144 ABC transporter related protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D Patl_3142 conserved hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component D Patl_1727 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Patl_2360 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Patl_2361 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Patl_3253 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D D Patl_3254 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D Patl_3255 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D Patl_3256 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Patl_3946 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Patl_3945 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Patl_3774 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Patl_3775 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Patl_1613 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Patl_1861 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Patl_3928 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Patl_3773 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Patl_1860 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Patl_3927 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Patl_0307 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Patl_2407 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Patl_2408 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Patl_2912 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Patl_2775 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Patl_2240 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Patl_2241 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Patl_0306 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Patl_2776 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Patl_2406 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Patl_2913 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Patl_2239 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Patl_0335 SSS sodium solute transporter superfamily K14388 SLC5A8_12; solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12 D Patl_1717 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Patl_2538 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Patl_4234 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Patl_2964 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Patl_0091 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Patl_1970 sugar transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter D Patl_0900 sugar transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter D Patl_3822 sugar transporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor D Patl_3727 sugar transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D Patl_0119 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D Patl_0801 L-fucose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D Patl_4175 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D Patl_3819 major facilitator superfamily MFS_1 K02429 fucP; MFS transporter, FHS family, L-fucose permease D Patl_3382 major facilitator superfamily MFS_1 K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter D Patl_0397 major facilitator superfamily MFS_1 K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D Patl_3658 major facilitator superfamily MFS_1 K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D Patl_2645 major facilitator superfamily MFS_1 K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D Patl_1910 major facilitator superfamily MFS_1 K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D Patl_1542 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Patl_3298 glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D Patl_2419 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Patl_3834 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Patl_4258 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Patl_0745 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Patl_1423 major facilitator superfamily MFS_1 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D Patl_3299 major facilitator superfamily MFS_1 K26602 yihN; MFS transporter, GlpU family, inner membrane protein D Patl_3845 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Patl_0572 HPr-like nitrogen-regulatory protein NPr K08485 ptsO; phosphocarrier protein NPr D Patl_2509 PTS system D-glucose-specific IIA component, Glc family K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Patl_0570 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Patl_1223 Ion transport 2 K10716 kch; voltage-gated potassium channel D Patl_0421 Ion transport protein K08714 VGSC; voltage-gated sodium channel D Patl_0492 ammonium transporter K03320 amt; ammonium transporter, Amt family D Patl_0637 ammonium transporter K03320 amt; ammonium transporter, Amt family D Patl_0196 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_1128 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_0872 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_3957 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_3824 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_2760 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_0620 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Patl_3698 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A D Patl_1658 TPR repeat K07114 yfbK; Ca-activated chloride channel homolog D Patl_1659 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog D Patl_3922 Vault protein inter-alpha-trypsin K07114 yfbK; Ca-activated chloride channel homolog D Patl_2451 protein of unknown function UPF0005 K19416 yccA; modulator of FtsH protease D Patl_3480 formate/nitrite transporter K21993 fdhC; formate transporter D Patl_2257 MscS Mechanosensitive ion channel K22051 mscM; miniconductance mechanosensitive channel D Patl_3333 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Patl_3671 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Patl_3399 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Patl_4090 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Patl_4142 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Patl_2842 MscS Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein D Patl_4057 MscS Mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel D Patl_0645 magnesium transporter K06213 mgtE; magnesium transporter D Patl_0262 MgtE intracellular region K06213 mgtE; magnesium transporter D Patl_1322 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Patl_1323 OmpA/MotB K02557 motB; chemotaxis protein MotB D Patl_0993 Sel1-like repeat K21217 motX; sodium-type polar flagellar protein MotX D Patl_1400 OmpA/MotB K21218 motY; sodium-type flagellar protein MotY D Patl_2279 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D Patl_1061 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D Patl_2988 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D Patl_2989 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D Patl_1062 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D Patl_2277 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD D Patl_2278 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD D Patl_1063 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD D Patl_2987 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD D Patl_4069 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD D Patl_2942 Cell division and transport-associated protein TolQ K03562 tolQ; biopolymer transport protein TolQ D Patl_2941 Cell division and transport-associated protein TolR K03560 tolR; biopolymer transport protein TolR D Patl_2667 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D Patl_3665 Mg2+ transporter protein, CorA-like protein K16074 zntB; zinc transporter D Patl_2457 camphor resistance protein CrcB K06199 crcB; fluoride exporter D Patl_1446 protein of unknown function UPF0187 K08994 yneE; ion channel-forming bestrophin family protein D Patl_2362 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Patl_1668 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Patl_3313 phosphate-selective porin O and P K07221 oprO_P; phosphate-selective porin OprO and OprP D Patl_3882 phosphate-selective porin O and P K07221 oprO_P; phosphate-selective porin OprO and OprP D Patl_2080 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Patl_2228 OmpA-like transmembrane region K03286 TC.OOP; OmpA-OmpF porin, OOP family D Patl_0250 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Patl_3839 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Patl_2275 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D Patl_3109 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein D Patl_1110 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D Patl_0311 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D Patl_1486 TonB-dependent receptor, plug K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D Patl_0203 TonB-dependent receptor, plug K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D Patl_3414 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D Patl_0295 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3368 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3441 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2225 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2258 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3627 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3776 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1142 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1443 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1723 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1691 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0940 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2180 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1520 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0932 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0377 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2865 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0865 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2402 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3686 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3650 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0155 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1938 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1980 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3818 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1059 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2993 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2585 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2604 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2756 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2319 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2701 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2711 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1810 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2547 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2694 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2904 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1940 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1966 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1840 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1822 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1826 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1862 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1863 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0767 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0785 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0809 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0887 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0935 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0939 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0967 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0334 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1117 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0149 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0122 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_1344 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_0414 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3466 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3471 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3410 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3795 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3901 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3904 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3638 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_3635 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Patl_2029 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Patl_0430 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Patl_2659 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system D Patl_4126 RND efflux system, outer membrane lipoprotein, NodT family K18300 oprN; outer membrane protein, multidrug efflux system D Patl_3798 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Patl_3599 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Patl_1072 polysaccharide export protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN D Patl_4001 polysaccharide export protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN D Patl_1170 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Patl_1257 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D Patl_3123 Pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB D Patl_2477 NlpBDapX lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D Patl_1334 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D Patl_1713 SmpA/OmlA K06186 bamE; outer membrane protein assembly factor BamE D Patl_0260 surface antigen (D15) K07278 tamA; translocation and assembly module TamA D Patl_0261 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB D Patl_0566 OstA-like protein K09774 lptA; lipopolysaccharide export system protein LptA D Patl_0565 protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC D Patl_3418 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein D Patl_1565 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein D Patl_1071 conserved hypothetical protein K20920 vpsM; polysaccharide biosynthesis protein VpsM D Patl_2209 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein D Patl_3294 LrgA K06518 cidA; holin-like protein D Patl_2187 major facilitator superfamily MFS_1 K16211 malY; maltose/moltooligosaccharide transporter D Patl_2027 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Patl_3652 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Patl_1472 zinc/iron permease K16267 zipB; zinc and cadmium transporter D Patl_0755 ZIP zinc transporter family protein K07238 TC.ZIP; zinc transporter, ZIP family D Patl_2031 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein D Patl_2392 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D Patl_4125 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18299 mexF; multidrug efflux pump D Patl_3799 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Patl_1037 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Patl_2235 acriflavin resistance protein K21134 triC; multidrug efflux pump D Patl_0619 acriflavin resistance protein K18989 vexF; multidrug efflux pump D Patl_0437 small multidrug resistance protein K03297 emrE; small multidrug resistance pump D Patl_1437 small multidrug resistance protein K03297 emrE; small multidrug resistance pump D Patl_1403 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D Patl_0774 protein of unknown function DUF6, transmembrane K03298 TC.DME; drug/metabolite transporter, DME family D Patl_2617 protein of unknown function DUF6, transmembrane K11939 rhtA; inner membrane transporter RhtA D Patl_4081 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD D Patl_2771 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Patl_2267 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D Patl_1837 L-lactate permease K03303 lutP; lactate permease D Patl_2586 putative quaternary ammonium permease K05020 opuD; glycine betaine transporter D Patl_0293 choline/carnitine/betaine transporter K02168 betT; choline/glycine/proline betaine transport protein D Patl_0562 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter D Patl_0098 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter D Patl_0525 Na+/solute symporter K14393 actP; cation/acetate symporter D Patl_4197 sodium/proton antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family D Patl_4144 sodium/proton antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family D Patl_2795 sodium/proton antiporter, NhaB family K03314 nhaB; Na+:H+ antiporter, NhaB family D Patl_1995 transporter, NhaC family K03315 nhaC; Na+:H+ antiporter, NhaC family D Patl_1377 sodium/proton antiporter, CPA1 family K03316 nhaP; Na+:H+ antiporter D Patl_1166 Kef-type potassium/proton antiporter, CPA2 family K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D Patl_1270 Kef-type potassium/proton antiporter, CPA2 family K03455 KEA1_2_3; K+:H+ antiporter D Patl_2263 Kef-type potassium/proton antiporter, CPA2 family K03455 KEA1_2_3; K+:H+ antiporter D Patl_2396 transporter, CPA2 family K26735 KEA4_5_6; K+:H+ antiporter D Patl_0016 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Patl_0020 TrkA-N K03499 trkA; trk/ktr system potassium uptake protein D Patl_3467 permease for cytosine/purines, uracil, thiamine, allantoin K10974 codB; cytosine permease D Patl_2223 uracil-xanthine permease K16345 xanP; xanthine permease XanP D Patl_2421 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Patl_0629 benzoate transporter K05782 benE; benzoate membrane transport protein D Patl_2595 Cl-channel, voltage gated K03281 clcA; chloride channel protein, CIC family D Patl_0546 Cl-channel, voltage gated K03281 clcA; chloride channel protein, CIC family D Patl_0608 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family D Patl_3643 natural resistance-associated macrophage protein K03322 mntH; manganese transport protein D Patl_3647 natural resistance-associated macrophage protein K03322 mntH; manganese transport protein D Patl_3815 natural resistance-associated macrophage protein K03322 mntH; manganese transport protein D Patl_2863 TRAP dicarboxylate transporter, DctM subunit K21393 yiaN; TRAP-type transport system large permease protein D Patl_2862 Tripartite ATP-independent periplasmic transporter, DctQ component K21394 yiaM; TRAP-type transport system small permease protein D Patl_2864 TRAP dicarboxylate transporter-DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein D Patl_3395 Bile acid:sodium symporter K03325 ACR3; arsenite transporter D Patl_3180 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Patl_2785 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins D Patl_1451 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein D Patl_2289 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein D Patl_2542 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein D Patl_2059 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein D Patl_2481 protein of unknown function UPF0118 K03548 perM; putative permease D Patl_3498 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Patl_0612 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Patl_3941 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Patl_3520 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D Patl_2409 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Patl_1058 iron permease FTR1 K07243 FTR; high-affinity iron transporter D Patl_0641 hypothetical protein K07243 FTR; high-affinity iron transporter D Patl_2276 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D Patl_1064 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D Patl_2986 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D Patl_2439 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D Patl_3539 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D Patl_2938 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein D Patl_3921 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein D Patl_2940 Cell division and transport-associated protein TolA K03646 tolA; colicin import membrane protein D Patl_2939 TolB-like protein K03641 tolB; TolB protein D Patl_3011 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Patl_3012 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Patl_3013 sodium pump decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D Patl_0744 secretion protein HlyD K03543 emrA; membrane fusion protein, multidrug efflux system D Patl_2030 biotin/lipoyl attachment K15727 czcB; membrane fusion protein, heavy metal efflux system D Patl_2393 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Patl_2661 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system D Patl_4124 efflux transporter, RND family, MFP subunit K18298 mexE; membrane fusion protein, multidrug efflux system D Patl_2234 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D Patl_3800 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_1036 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_2229 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_0618 efflux transporter, RND family, MFP subunit K18990 vexE; membrane fusion protein, multidrug efflux system D Patl_4000 Protein-tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D Patl_1073 Protein-tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D Patl_3807 phage integrase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D Patl_1168 Protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Patl_1169 lipopolysaccharide biosynthesis K25590 epsF; protein tyrosine kinase modulator D Patl_0751 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D Patl_1346 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D Patl_1708 FeoA K04758 feoA; ferrous iron transport protein A D Patl_1709 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Patl_3251 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Patl_3306 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D Patl_2428 Transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Patl_3569 MltA-interacting MipA K07274 mipA; MipA family protein D Patl_3404 MltA-interacting MipA K07274 mipA; MipA family protein C 02044 Secretion system [BR:pat02044] D Patl_0430 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Patl_2660 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Patl_2661 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system D Patl_2659 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system D Patl_3281 ATPase K02450 gspA; general secretion pathway protein A D Patl_3594 putative general secretion pathway protein A K02450 gspA; general secretion pathway protein A D Patl_3280 hypothetical protein K02451 gspB; general secretion pathway protein B D Patl_0230 general secretion pathway protein C K02452 gspC; general secretion pathway protein C D Patl_3236 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D Patl_0231 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D Patl_0232 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Patl_3232 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Patl_0233 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D Patl_3231 type II secretion system protein K02455 gspF; general secretion pathway protein F D Patl_0234 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Patl_3230 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Patl_3229 Prepilin-type cleavage/methylation K02456 gspG; general secretion pathway protein G D Patl_0235 general secretion pathway protein H K02457 gspH; general secretion pathway protein H D Patl_0236 general secretion pathway protein I K02458 gspI; general secretion pathway protein I D Patl_0237 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J D Patl_3227 Prepilin-type cleavage/methylation K02459 gspJ; general secretion pathway protein J D Patl_3228 Prepilin-type cleavage/methylation K02459 gspJ; general secretion pathway protein J D Patl_0238 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D Patl_3226 hypothetical protein K02460 gspK; general secretion pathway protein K D Patl_0239 general secretion pathway protein L K02461 gspL; general secretion pathway protein L D Patl_0240 General secretion pathway M protein K02462 gspM; general secretion pathway protein M D Patl_0241 type II secretion system protein N K02463 gspN; general secretion pathway protein N D Patl_3342 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Patl_3344 Prepilin-type cleavage/methylation K02650 pilA; type IV pilus assembly protein PilA D Patl_3343 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Patl_3168 Prepilin-type cleavage/methylation K02655 pilE; type IV pilus assembly protein PilE D Patl_3170 Prepilin-type cleavage/methylation K02655 pilE; type IV pilus assembly protein PilE D Patl_3128 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D Patl_0671 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Patl_0670 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN D Patl_0669 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO D Patl_0668 Pilus assembly protein, PilQ K02665 pilP; type IV pilus assembly protein PilP D Patl_0667 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D Patl_3717 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Patl_3716 twitching motility protein K02670 pilU; twitching motility protein PilU D Patl_3174 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D Patl_3173 Prepilin-type cleavage/methylation-like protein K02672 pilW; type IV pilus assembly protein PilW D Patl_3172 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D Patl_3171 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein K02674 pilY1; type IV pilus assembly protein PilY1 D Patl_3169 Prepilin-type cleavage/methylation K08084 fimT; type IV fimbrial biogenesis protein FimT D Patl_3362 AAA ATPase containing von Willebrand factor type A (vWA) domain-like protein K08086 fimV; pilus assembly protein FimV D Patl_0177 Prepilin-type cleavage/methylation K10924 mshA; MSHA pilin protein MshA D Patl_1972 Prepilin-type cleavage/methylation K10924 mshA; MSHA pilin protein MshA D Patl_0176 Prepilin-type cleavage/methylation K10925 mshB; MSHA pilin protein MshB D Patl_0178 Prepilin-type cleavage/methylation K10926 mshC; MSHA pilin protein MshC D Patl_0179 Prepilin-type cleavage/methylation-like protein K10927 mshD; MSHA pilin protein MshD D Patl_0173 type II secretion system protein E K12276 mshE; MSHA biogenesis protein MshE D Patl_0174 type II secretion system protein K12278 mshG; MSHA biogenesis protein MshG D Patl_0166 hypothetical protein K12279 mshI; MSHA biogenesis protein MshI D Patl_0168 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ D Patl_0169 hypothetical protein K12281 mshK; MSHA biogenesis protein MshK D Patl_0170 pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL D Patl_0171 MSHA biogenesis protein MshM K12283 mshM; MSHA biogenesis protein MshM D Patl_0172 hypothetical protein K12284 mshN; MSHA biogenesis protein MshN D Patl_0180 Prepilin-type cleavage/methylation K12285 mshO; MSHA biogenesis protein MshO D Patl_0181 type II secretory pathway component K12286 mshP; MSHA biogenesis protein MshP D Patl_0182 CUB domain-containing protein K12287 mshQ; MSHA biogenesis protein MshQ D Patl_3167 hypothetical protein K02679 ppdA; prepilin peptidase dependent protein A D Patl_3166 Prepilin-type cleavage/methylation-like protein K02680 ppdB; prepilin peptidase dependent protein B D Patl_3720 protein of unknown function YGGT K02221 yggT; YggT family protein D Patl_3198 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Patl_1779 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Patl_3033 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Patl_3034 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Patl_3258 FlhB domain protein K04061 flhB2; flagellar biosynthesis protein D Patl_3047 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Patl_3045 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Patl_3044 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Patl_3039 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Patl_3038 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D Patl_3037 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Patl_3036 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Patl_3035 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Patl_3713 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Patl_3511 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Patl_3614 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Patl_4203 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Patl_1230 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Patl_0592 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Patl_4204 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Patl_1231 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Patl_1575 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Patl_1009 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Patl_1670 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Patl_3944 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Patl_1229 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Patl_4312 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Patl_4213 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Patl_2610 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Patl_4214 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Patl_2609 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D Patl_4215 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D Patl_2608 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:pat02042] D Patl_2362 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Patl_1668 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Patl_3595 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:pat02022] D Patl_1054 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Patl_1053 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Patl_2841 periplasmic sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Patl_2840 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Patl_0226 periplasmic sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Patl_0225 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Patl_0988 periplasmic sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Patl_0987 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Patl_1528 periplasmic sensor signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Patl_1527 two component transcriptional regulator, winged helix family K07664 baeR; two-component system, OmpR family, response regulator BaeR D Patl_3747 PAS/PAC sensor hybrid histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D Patl_0082 two component transcriptional regulator, winged helix family K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D Patl_3919 periplasmic sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D Patl_3412 periplasmic sensor signal transduction histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D Patl_3411 two component transcriptional regulator, winged helix family K19610 pfeR; two-component system, OmpR family, response regulator PfeR D Patl_3572 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Patl_0643 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Patl_2302 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Patl_2301 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Patl_3571 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Patl_3920 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Patl_0644 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Patl_2290 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Patl_0507 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Patl_2450 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Patl_2291 periplasmic sensor signal transduction histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D Patl_2386 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Patl_2385 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator D Patl_1149 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator D Patl_1151 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator D Patl_1027 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Patl_1028 nitrogen metabolism transcriptional regulator, NtrC, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Patl_1601 periplasmic sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Patl_1603 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Patl_1533 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Patl_1535 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Patl_0765 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Patl_3295 two component, sigma54 specific, transcriptional regulator, Fis family K02481 flgR; two-component system, NtrC family, response regulator D Patl_3027 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Patl_1591 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3029 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3547 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3264 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3629 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3026 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Patl_3102 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Patl_0423 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Patl_2095 response regulator receiver protein K14987 fixJ; two-component system, LuxR family, response regulator FixJ D Patl_2096 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ D Patl_3050 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Patl_3049 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Patl_3369 signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Patl_3370 response regulator receiver protein K15012 regA; two-component system, response regulator RegA D Patl_2664 GAF sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Patl_1871 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D Patl_1594 response regulator receiver protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D Patl_3677 response regulator receiver protein K22010 pdtaR; two-component system, response regulator PdtaR D Patl_2528 nitrate transporter, putative K22067 nasS; two-component system, oxyanion-binding sensor D Patl_2529 response regulator receiver and ANTAR domain protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator D Patl_4293 multi-sensor hybrid histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS D Patl_2082 histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Patl_3915 periplasmic sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Patl_3604 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:pat02035] D Patl_3027 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Patl_3023 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Patl_3024 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Patl_0248 CheC-like protein K03409 cheX; chemotaxis protein CheX D Patl_3101 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Patl_3026 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Patl_1591 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3029 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3547 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3264 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3629 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Patl_3028 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D Patl_3102 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Patl_4181 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_4183 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_3424 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_3464 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_3477 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Patl_0068 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_0520 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_0604 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_0143 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Patl_2247 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Patl_3045 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Patl_3044 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Patl_3043 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Patl_3038 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D Patl_3037 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Patl_3036 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Patl_3035 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Patl_3033 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Patl_3034 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Patl_3046 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Patl_3040 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Patl_3039 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Patl_3047 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Patl_3093 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Patl_3103 flagella basal body P ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Patl_3094 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Patl_2812 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Patl_3041 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Patl_0065 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Patl_3048 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Patl_3042 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Patl_3100 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Patl_3099 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Patl_3098 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Patl_3096 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Patl_3095 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Patl_3092 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Patl_3097 flagellar basal body FlaE K02390 flgE; flagellar hook protein FlgE D Patl_3091 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Patl_3090 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Patl_3105 FlgN K02399 flgN; flagellar biosynthesis protein FlgN D Patl_3106 protein of unknown function DUF400 K09860 flgP; outer membrane protein FlgP D Patl_0993 Sel1-like repeat K21217 motX; sodium-type polar flagellar protein MotX D Patl_1400 OmpA/MotB K21218 motY; sodium-type flagellar protein MotY D Patl_3085 flagellin-like protein K02406 fliC; flagellin D Patl_3052 flagellin-like protein K02406 fliC; flagellin D Patl_3087 flagellin-like protein K02406 fliC; flagellin D Patl_3088 flagellin-like protein K02406 fliC; flagellin D Patl_3083 flagellar hook-associated 2-like protein K02407 fliD; flagellar hook-associated protein 2 D Patl_3082 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Patl_3030 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Patl_1322 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Patl_1323 OmpA/MotB K02557 motB; chemotaxis protein MotB D Patl_3051 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Patl_3050 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Patl_3049 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Patl_3104 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Patl_3084 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Patl_3032 GTP-binding signal recognition particle SRP54, G-domain K02404 flhF; flagellar biosynthesis protein FlhF D Patl_3031 Cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Patl_3717 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Patl_3716 twitching motility protein K02670 pilU; twitching motility protein PilU D Patl_3344 Prepilin-type cleavage/methylation K02650 pilA; type IV pilus assembly protein PilA D Patl_3343 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Patl_3342 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Patl_3128 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D Patl_0667 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D Patl_0668 Pilus assembly protein, PilQ K02665 pilP; type IV pilus assembly protein PilP D Patl_0669 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO D Patl_0670 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN D Patl_0671 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Patl_3174 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D Patl_3173 Prepilin-type cleavage/methylation-like protein K02672 pilW; type IV pilus assembly protein PilW D Patl_3172 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D Patl_3171 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein K02674 pilY1; type IV pilus assembly protein PilY1 D Patl_3168 Prepilin-type cleavage/methylation K02655 pilE; type IV pilus assembly protein PilE D Patl_3170 Prepilin-type cleavage/methylation K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pat04812] D Patl_0183 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Patl_3514 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Patl_3515 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Patl_0925 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Patl_0926 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Patl_0927 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Patl_4304 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Patl_3025 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Patl_4303 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:pat04147] D Patl_2894 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Patl_3327 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Patl_3266 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Patl_1634 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Patl_1640 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Patl_2596 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Patl_3328 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Patl_0968 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Patl_0446 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Patl_1164 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Patl_1023 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Patl_3688 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Patl_0941 peptidase M19, renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Patl_1398 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Patl_3753 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Patl_1987 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Patl_3623 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Patl_3968 dipeptidyl-peptidase IV, Serine peptidase, MEROPS family S09B K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D Patl_2641 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D Patl_3120 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Patl_0603 translation elongation factor Tu K02358 tuf; elongation factor Tu D Patl_3996 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Patl_1047 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Patl_0322 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_1368 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_2804 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_0998 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_3811 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Patl_2923 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_1917 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Patl_2893 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Patl_2898 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Patl_0978 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Patl_0979 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Patl_1123 fumarylacetoacetate hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D Patl_0242 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Patl_0823 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D Patl_0831 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D Patl_0647 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Patl_1636 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Patl_2113 maltooligosyl trehalose hydrolase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Patl_3533 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Patl_4201 glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_1025 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Patl_4219 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Patl_2997 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Patl_1125 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Patl_1692 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Patl_1216 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Patl_1156 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Patl_0268 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Patl_3352 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Patl_2145 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Patl_0655 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Patl_0970 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Patl_1574 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Patl_2593 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Patl_0580 Lipocalin-like protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:pat02048] D Patl_0663 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Patl_3289 DNA methylase N-4/N-6 K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D Patl_4096 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Patl_0727 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Patl_2721 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-] D Patl_1353 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Patl_3002 phage shock protein C, PspC K03973 pspC; phage shock protein C D Patl_3003 phage shock B K03970 pspB; phage shock protein B D Patl_3764 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D Patl_3765 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D Patl_3514 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Patl_0183 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Patl_0509 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Patl_0435 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Patl_2919 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Patl_3159 protein of unknown function DUF339 K09159 cptB; antitoxin CptB D Patl_1238 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:pat04090] D Patl_3968 dipeptidyl-peptidase IV, Serine peptidase, MEROPS family S09B K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 01504 Antimicrobial resistance genes [BR:pat01504] D Patl_1431 lyase precursor-like protein K18235 vgb; virginiamycin B lyase [EC:4.2.99.-] D Patl_2841 periplasmic sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Patl_2840 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Patl_3800 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_1036 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_2229 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Patl_3799 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Patl_1037 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Patl_3798 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Patl_3599 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Patl_4124 efflux transporter, RND family, MFP subunit K18298 mexE; membrane fusion protein, multidrug efflux system D Patl_4125 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18299 mexF; multidrug efflux pump D Patl_4126 RND efflux system, outer membrane lipoprotein, NodT family K18300 oprN; outer membrane protein, multidrug efflux system D Patl_0743 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D Patl_2234 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D Patl_2868 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Patl_0905 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Patl_0430 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pat00537] D Patl_1216 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Patl_1825 Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D Patl_3688 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Patl_0941 peptidase M19, renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pat03100] D Patl_R0002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0017 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0082 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0056 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Patl_R0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Patl_R0067 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Patl_R0070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Patl_R0065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Patl_R0064 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Patl_R0062 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Patl_R0063 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Patl_R0038 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Patl_R0039 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Patl_R0040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Patl_R0043 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Patl_R0048 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Patl_R0052 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Patl_R0051 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Patl_R0053 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Patl_R0055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Patl_R0054 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Patl_R0044 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Patl_R0072 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Patl_R0073 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Patl_R0076 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Patl_R0069 tRNA-His K14226 tRNA-His; tRNA His D Patl_R0003 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Patl_R0081 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Patl_R0010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Patl_R0018 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Patl_R0025 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Patl_R0042 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Patl_R0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Patl_R0074 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Patl_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Patl_R0068 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Patl_R0060 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Patl_R0061 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Patl_R0049 tRNA-Met K14230 tRNA-Met; tRNA Met D Patl_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met D Patl_R0031 tRNA-Met K14230 tRNA-Met; tRNA Met D Patl_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met D Patl_R0037 tRNA-Met K14230 tRNA-Met; tRNA Met D Patl_R0006 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Patl_R0071 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Patl_R0034 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Patl_R0046 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Patl_R0045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Patl_R0015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Patl_R0066 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Patl_R0075 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Patl_R0078 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Patl_R0084 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Patl_R0013 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Patl_R0029 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Patl_R0077 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Patl_R0057 tRNA-Val K14237 tRNA-Val; tRNA Val D Patl_R0058 tRNA-Val K14237 tRNA-Val; tRNA Val D Patl_R0059 tRNA-Val K14237 tRNA-Val; tRNA Val D Patl_R0047 tRNA-Val K14237 tRNA-Val; tRNA Val D Patl_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0023 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0083 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Patl_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Patl_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0079 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Patl_R0014 rnpB; RNase_P_RNA K01978 rnpB; M1 RNA D Patl_R0033 ssrA; ssrA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Patl_4134 aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D Patl_2232 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D Patl_2686 glucose-methanol-choline oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11] D Patl_2400 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D Patl_1371 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D Patl_2601 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D Patl_3679 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D Patl_2602 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D Patl_3678 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D Patl_0748 carboxynorspermidine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D Patl_2147 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D Patl_1814 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Patl_1357 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Patl_2637 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Patl_2167 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Patl_3759 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Patl_2527 (Acyl-carrier protein) phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D Patl_1067 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D Patl_4063 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Patl_0746 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Patl_1638 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Patl_3680 glutathione S-transferase-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D Patl_3983 glutathione S-transferase-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D Patl_2014 oxidoreductase, molybdopterin binding protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D Patl_2480 Redoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Patl_3734 thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Patl_1066 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Patl_0742 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Patl_0101 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Patl_0493 Dyp-type peroxidase family K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D Patl_1676 Pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Patl_2273 2OG-Fe(II) oxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D Patl_3472 globin K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D Patl_0415 oxidoreductase FAD/NAD(P)-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Patl_2287 Ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Patl_2484 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D Patl_3397 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Patl_3861 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Patl_1326 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Patl_1584 transferase hexapeptide repeat K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D Patl_3297 3-oxoacyl-(acyl-carrier protein) synthase K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D Patl_2210 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Patl_2696 GCN5-related N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D Patl_2371 Leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Patl_2372 Arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D Patl_2338 Alpha-glucosidase K18820 agd31B; oligosaccharide 4-alpha-D-glucosyltransferase [EC:2.4.1.161] D Patl_4292 DTW domain containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D Patl_3843 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Patl_0458 ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Patl_0574 ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Patl_1743 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Patl_3601 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D Patl_1736 conserved hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Patl_3959 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D Patl_2040 serine/threonine protein kinase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1] D Patl_0758 (Isocitrate dehydrogenase (NADP+)) kinase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D Patl_0830 sialic acid-specific 9-O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D Patl_1852 glycoside hydrolase family 2, sugar binding protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D Patl_0874 Carboxylesterase, type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D Patl_0510 Carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D Patl_2308 putative esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-] D Patl_0426 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Patl_2189 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Patl_0145 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Patl_2943 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Patl_3390 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Patl_1074 PHP-like protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D Patl_2828 PHP-like protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Patl_1667 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Patl_2248 response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Patl_4285 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Patl_4217 Sec-independent protein translocase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Patl_2115 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Patl_3146 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Patl_2149 alpha/beta hydrolase fold familiy K01175 ybfF; esterase [EC:3.1.-.-] D Patl_2657 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Patl_1492 glycoside hydrolase, family 24 K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D Patl_1069 glycoside hydrolase, family 8 K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156] D Patl_0333 conserved hypothetical protein K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170] D Patl_2861 glycoside hydrolase, family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D Patl_0824 glycoside hydrolase, family 16 K20830 por; beta-porphyranase [EC:3.2.1.178] D Patl_1904 Agarase K27195 E3.2.1.222; funoran endo-beta-hydrolase [EC:3.2.1.222] D Patl_3433 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Patl_0023 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Patl_1505 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Patl_2224 amidohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D Patl_3851 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25] D Patl_2128 maf protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D Patl_1662 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Patl_3493 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Patl_3973 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Patl_3651 Heparinase II/III-like protein K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26] D Patl_3966 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D Patl_3642 RbsD or FucU transport K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D Patl_0822 conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D Patl_0502 peptidylprolyl isomerase, FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D Patl_1552 peptidyl-prolyl cis-trans isomerase, cyclophilin type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D Patl_0243 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D Patl_0073 ATP dependent DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D Patl_2968 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Patl_2967 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Patl_2966 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Patl_0452 NADH:ubiquinone oxidoreductase, subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D Patl_0453 NADH:ubiquinone oxidoreductase, subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D Patl_0454 NADH:ubiquinone oxidoreductase, subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D Patl_0455 NADH:ubiquinone oxidoreductase, subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D Patl_0456 NADH:ubiquinone oxidoreductase, subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D Patl_0457 NADH:ubiquinone oxidoreductase, subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D Patl_2068 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D Patl_3938 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D Patl_2521 putative signal transduction protein with CBS domains K04767 acuB; acetoin utilization protein AcuB D Patl_2685 Twin-arginine translocation pathway signal K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit C 99982 Energy metabolism D Patl_2845 formate dehydrogenase, subunit FdhD K02379 fdhD; FdhD protein D Patl_1243 ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S D Patl_2304 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D Patl_0428 4Fe-4S ferredoxin, iron-sulfur binding protein K05524 fdxA; ferredoxin D Patl_2475 ferredoxin K11107 yfaE; ferredoxin D Patl_2969 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Patl_2970 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Patl_2965 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Patl_4309 flavodoxin/nitric oxide synthase K06205 mioC; MioC protein D Patl_4067 flavodoxin K03840 fldB; flavodoxin II D Patl_1239 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D Patl_3790 conserved hypothetical protein K15536 cybC; soluble cytochrome b562 D Patl_2151 flavodoxin K03839 fldA; flavodoxin I D Patl_2146 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Patl_0654 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D Patl_3912 acyl-CoA dehydrogenase-like protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Patl_1773 protein of unknown function DUF540 K06203 cysZ; CysZ protein D Patl_1233 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein D Patl_3718 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Patl_1091 exopolysaccharide production protein K16567 exoQ; exopolysaccharide production protein ExoQ D Patl_2464 Tetratricopeptide region K19804 lapB; lipopolysaccharide assembly protein B C 99987 Cofactor metabolism D Patl_0339 HemY-like protein K02498 hemY; HemY protein D Patl_4211 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D Patl_4210 protein of unknown function DUF1243 K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D Patl_0069 protein of unknown function DUF526 K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D Patl_3988 AbgT putative transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D Patl_2576 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D Patl_1616 DoxX K15977 K15977; putative oxidoreductase D Patl_1677 DoxX K15977 K15977; putative oxidoreductase D Patl_0868 DoxX K15977 K15977; putative oxidoreductase D Patl_2327 DoxX K15977 K15977; putative oxidoreductase D Patl_2972 DoxX K15977 K15977; putative oxidoreductase D Patl_0345 Carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Patl_2376 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Patl_3733 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Patl_3784 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Patl_1543 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Patl_0491 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2 D Patl_4226 RNA binding S1 K06959 tex; protein Tex C 99974 Translation D Patl_1612 ABC transporter related protein K13926 rbbA; ribosome-dependent ATPase D Patl_1747 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Patl_2375 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Patl_3137 trigger factor K03545 tig; trigger factor D Patl_2013 Ferric reductase-like protein transmembrane component-like protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D Patl_1739 SsrA-binding protein K03664 smpB; SsrA-binding protein D Patl_4252 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Patl_3690 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D Patl_4022 OsmC-like protein K07397 yhfA; putative redox protein D Patl_4233 HesB/YadR/YfhF K07400 nfuA; Fe/S biogenesis protein NfuA D Patl_2426 molybdenum cofactor sulfurylase K07402 xdhC; xanthine dehydrogenase accessory factor D Patl_2513 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D Patl_4291 methylated-DNA--protein-cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D Patl_0046 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Patl_1629 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC D Patl_3694 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Patl_3600 Excinuclease ABC, C subunit-like protein K07461 K07461; putative endonuclease D Patl_0025 DNA protecting protein DprA K04096 smf; DNA processing protein D Patl_2458 Recombination protein MgsA K07478 ycaJ; putative ATPase D Patl_0027 DNA topoisomerase, type IA, zn finger K07479 yrdD; putative DNA topoisomerase D Patl_0840 transposase IS116/IS110/IS902 K07486 K07486; transposase D Patl_3756 transposase IS116/IS110/IS902 K07486 K07486; transposase D Patl_2653 transposase IS116/IS110/IS902 K07486 K07486; transposase D Patl_1950 transposase IS116/IS110/IS902 K07486 K07486; transposase D Patl_1845 transposase IS116/IS110/IS902 K07486 K07486; transposase D Patl_0862 transposase IS116/IS110/IS902 K07486 K07486; transposase D Patl_1984 ISCps7, transposase K07486 K07486; transposase D Patl_1384 transposase IS116/IS110/IS902 K07486 K07486; transposase C 99979 Viral proteins C 99998 Others D Patl_3004 phage shock protein A, PspA K03969 pspA; phage shock protein A D Patl_4044 phage shock protein A, PspA K03969 pspA; phage shock protein A D Patl_2086 Rhodanese-like protein K03972 pspE; phage shock protein E D Patl_2896 conserved hypothetical protein 103 K09747 ebfC; nucleoid-associated protein EbfC D Patl_0152 deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific) K25656 cry; cryptochrome B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Patl_4084 formate/nitrite transporter K21990 yfdC; formate-nitrite transporter family protein D Patl_3275 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Patl_2680 major facilitator superfamily MFS_1 K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Patl_2230 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Patl_2231 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Patl_2505 choline/carnitine/betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D Patl_3244 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D Patl_3319 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Patl_1653 sodium/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Patl_4147 sodium/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Patl_3683 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family D Patl_0835 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family D Patl_2683 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family D Patl_2325 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Patl_0289 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Patl_0129 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Patl_4170 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Patl_4060 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Patl_1994 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Patl_1642 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Patl_2575 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Patl_0630 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D Patl_0532 nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D Patl_1392 SpoVR K06415 spoVR; stage V sporulation protein R D Patl_3610 peptidase M23B K22719 envC; murein hydrolase activator C 99993 Cell motility D Patl_3192 Syd K15723 syd; SecY interacting protein Syd C 99995 Signaling proteins D Patl_3348 signaling modulator of AmpD, AmpE K03807 ampE; AmpE protein D Patl_1992 ProQ activator of osmoprotectant transporter ProP K03607 proQ; ProP effector D Patl_2094 UspA K06149 uspA; universal stress protein A D Patl_1469 UspA K06149 uspA; universal stress protein A D Patl_2065 UspA K14055 uspE; universal stress protein E D Patl_2285 UspA K14055 uspE; universal stress protein E D Patl_2103 hypothetical protein K14055 uspE; universal stress protein E D Patl_1024 GTP-binding protein TypA K06207 typA; GTP-binding protein D Patl_1333 anti-ECFsigma factor, ChrR K07167 chrR; putative transcriptional regulator D Patl_2351 HPP domain containing protein+B94 K07168 K07168; CBS domain-containing membrane protein D Patl_2207 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Patl_3829 PhoH-like protein K07175 phoH2; PhoH-like ATPase D Patl_1394 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase D Patl_2504 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein D Patl_0528 putative signal-transduction protein with CBS domains K07182 K07182; CBS domain-containing protein D Patl_3852 SH3, type 3 K07184 ygiM; SH3 domain protein D Patl_3145 hypothetical protein K07186 smp; membrane protein D Patl_4311 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D Patl_2459 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D Patl_2565 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D Patl_4150 VacJ-like lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D Patl_3247 VacJ-like lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D Patl_1258 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein D Patl_3863 peptidase M23B K06194 nlpD; lipoprotein NlpD D Patl_0791 TPR repeat K05803 nlpI; lipoprotein NlpI D Patl_0030 OmpW K07275 ompW; outer membrane protein D Patl_3357 putative salt-induced outer membrane protein K07283 ydiY; putative salt-induced outer membrane protein D Patl_3358 protein of unknown function DUF481 K07283 ydiY; putative salt-induced outer membrane protein D Patl_2806 outer membrane lipoprotein, Slp family K07285 slp; outer membrane lipoprotein D Patl_0197 protein of unknown function DUF107 K07340 ybbJ; inner membrane protein D Patl_1611 secretion protein HlyD K01993 ABC-2.TX; HlyD family secretion protein D Patl_2777 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Patl_2405 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Patl_2238 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Patl_2909 protein of unknown function UPF0118 K11744 tqsA; AI-2 transport protein TqsA D Patl_3252 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE D Patl_3249 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Patl_3127 transcriptional regulator, XRE family K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D Patl_3314 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Patl_1397 BFD-like (2Fe-2S)-binding region K02192 bfd; bacterioferritin-associated ferredoxin D Patl_2793 periplasmic glucan biosynthesis protein, MdoG K03670 mdoG; periplasmic glucans biosynthesis protein D Patl_0127 CutC K06201 cutC; copper homeostasis protein D Patl_3422 ApaG K06195 apaG; ApaG protein D Patl_0346 Frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY D Patl_3473 NnrS K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D Patl_1608 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Patl_2061 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K03796 bax; Bax protein D Patl_1704 Mammalian cell entry related protein K06192 pqiB; paraquat-inducible protein B D Patl_1654 GCN5-related N-acetyltransferase K02348 elaA; ElaA protein D Patl_3607 ChaB K06197 chaB; cation transport regulator D Patl_0264 transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein D Patl_4133 transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein D Patl_3868 PHP-like protein K04477 ycdX; putative hydrolase D Patl_0254 globin K06886 glbN; hemoglobin D Patl_1274 Patatin K07001 K07001; NTE family protein D Patl_1205 Patatin K07001 K07001; NTE family protein D Patl_2063 Patatin K07001 K07001; NTE family protein D Patl_1615 hydrolase (HAD superfamily)-like protein K07025 K07025; putative hydrolase of the HAD superfamily D Patl_0544 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein D Patl_4141 putative ribonuclease BN K07058 K07058; membrane protein D Patl_3954 tRNA-processing RNAse BN K07058 K07058; membrane protein D Patl_0083 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA D Patl_0964 Rhodanese-like protein K07146 K07146; UPF0176 protein D Patl_2380 protein of unknown function DUF489 K07153 hflD; high frequency lysogenization protein D Patl_1374 conserved hypothetical protein K11477 glcG; glc operon protein GlcG D Patl_3396 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH D Patl_0110 SlyX K03745 slyX; SlyX protein D Patl_0026 protein of unknown function DUF494 K03747 smg; Smg protein D Patl_3273 CreA K05805 creA; CreA protein D Patl_2368 protein of unknown function DUF335, SprT K02742 sprT; SprT protein D Patl_1607 Sporulation related protein K03749 dedD; DedD protein D Patl_0664 hypothetical protein K03112 damX; DamX protein D Patl_1790 hypothetical protein K03975 dedA; membrane-associated protein D Patl_1705 integral membrane protein, PqiA family K03808 pqiA; paraquat-inducible protein A D Patl_0482 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D Patl_3862 protein of unknown function DUF368 K08974 K08974; putative membrane protein D Patl_1983 conserved hypothetical protein K08983 K08983; putative membrane protein D Patl_3786 putative integral membrane protein K08984 yjdF; putative membrane protein D Patl_1221 protein of unknown function DUF350 K08989 K08989; putative membrane protein D Patl_3000 conserved hypothetical protein 1620 K08990 ycjF; putative membrane protein D Patl_2011 SEC-C motif containing protein K09858 K09858; SEC-C motif domain protein D Patl_0582 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D Patl_1108 Ankyrin K06867 K06867; uncharacterized protein D Patl_0085 hypothetical protein K06889 K06889; uncharacterized protein D Patl_3001 protein of unknown function DUF463, YcjX-like protein K06918 K06918; uncharacterized protein D Patl_3354 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein D Patl_1819 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Patl_2335 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Patl_1328 conserved hypothetical protein K06954 K06954; uncharacterized protein D Patl_2047 GCN5-related N-acetyltransferase K06977 K06977; uncharacterized protein D Patl_0930 X-Pro dipeptidyl-peptidase-like protein K06978 K06978; uncharacterized protein D Patl_2778 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein D Patl_0511 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein D Patl_0279 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein D Patl_0214 Glyoxalase/bleomycin resistance protein/dioxygenase K06991 K06991; uncharacterized protein D Patl_2316 peptidase C39, bacteriocin processing K06992 K06992; uncharacterized protein D Patl_2366 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D Patl_1937 conserved hypothetical protein K06996 K06996; uncharacterized protein D Patl_0434 protein of unknown function UPF0227 K07000 K07000; uncharacterized protein D Patl_2001 putative membrane protein K07003 K07003; uncharacterized protein D Patl_4151 conserved hypothetical protein K07003 K07003; uncharacterized protein D Patl_0958 conserved hypothetical protein K07003 K07003; uncharacterized protein D Patl_1033 Endonuclease I K07004 K07004; uncharacterized protein D Patl_1127 Oxidoreductase FAD-binding region K07006 K07006; uncharacterized protein D Patl_3380 membrane-associated hydrolase of alkaline phosphatase superfamily K07014 K07014; uncharacterized protein D Patl_3925 putative esterase K07017 K07017; uncharacterized protein D Patl_0134 alpha/beta hydrolase fold familiy K07019 K07019; uncharacterized protein D Patl_2202 conserved hypothetical protein K07020 K07020; uncharacterized protein D Patl_0613 yecA family protein K07039 K07039; uncharacterized protein D Patl_0111 conserved hypothetical protein K07070 K07070; uncharacterized protein D Patl_2911 conserved hypothetical protein K07071 K07071; uncharacterized protein D Patl_0934 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Patl_0945 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Patl_2981 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Patl_2846 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Patl_2053 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Patl_3844 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Patl_4105 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Patl_0331 protein of unknown function DUF839 K07093 K07093; uncharacterized protein D Patl_2607 Twin-arginine translocation pathway signal K07093 K07093; uncharacterized protein D Patl_1474 conserved hypothetical protein K07093 K07093; uncharacterized protein D Patl_1728 putative hypoxanthine phosphoribosyltransferase K07101 K07101; uncharacterized protein D Patl_1159 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Patl_1160 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Patl_2106 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein D Patl_2107 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein D Patl_3304 NAD-dependent epimerase/dehydratase K07118 K07118; uncharacterized protein D Patl_3693 LppC putative lipoprotein K07121 K07121; uncharacterized protein D Patl_0906 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein D Patl_2892 uncharacterized relative of glutathione S-transferase K07136 K07136; uncharacterized protein D Patl_0429 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D Patl_1331 Peptidase S16, lon-like protein K07157 K07157; uncharacterized protein D Patl_0103 VWA containing CoxE-like protein K07161 K07161; uncharacterized protein D Patl_4313 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Patl_3427 protein of unknown function DUF192 K09005 K09005; uncharacterized protein D Patl_1040 GatB/Yqey K09117 K09117; uncharacterized protein D Patl_0407 conserved hypothetical protein K09131 K09131; uncharacterized protein D Patl_1555 protein of unknown function DUF493 K09158 K09158; uncharacterized protein D Patl_2798 protein of unknown function UPF0153 K09160 K09160; uncharacterized protein D Patl_0917 conserved hypothetical protein K09190 K09190; uncharacterized protein D Patl_1327 protein of unknown function DUF1365 K09701 K09701; uncharacterized protein D Patl_3468 protein of unknown function DUF917 K09703 K09703; uncharacterized protein D Patl_1550 protein of unknown function DUF985 K09705 K09705; uncharacterized protein D Patl_2508 conserved hypothetical protein K09707 K09707; uncharacterized protein D Patl_2173 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Patl_1318 protein of unknown function DUF188 K09768 K09768; uncharacterized protein D Patl_2835 YCII-related protein K09780 K09780; uncharacterized protein D Patl_1508 YCII-related protein K09780 K09780; uncharacterized protein D Patl_1854 YCII-related protein K09780 K09780; uncharacterized protein D Patl_3608 protein of unknown function DUF808 K09781 K09781; uncharacterized protein D Patl_1393 protein of unknown function DUF444 K09786 K09786; uncharacterized protein D Patl_1782 protein of unknown function DUF343 K09791 K09791; uncharacterized protein D Patl_2066 integral membrane protein K09792 K09792; uncharacterized protein D Patl_1355 conserved hypothetical protein K09794 K09794; uncharacterized protein D Patl_3788 protein of unknown function DUF465 K09794 K09794; uncharacterized protein D Patl_2412 protein of unknown function DUF541 K09797 K09797; uncharacterized protein D Patl_3609 protein of unknown function DUF610, YibQ K09798 K09798; uncharacterized protein D Patl_1741 protein of unknown function UPF0125 K09801 K09801; uncharacterized protein D Patl_2220 protein of unknown function DUF541 K09807 K09807; uncharacterized protein D Patl_0459 protein of unknown function DUF539 K05952 K05952; uncharacterized protein D Patl_4023 conserved hypothetical protein K00243 K00243; uncharacterized protein D Patl_1703 protein of unknown function DUF330 K09857 K09857; uncharacterized protein D Patl_3620 protein of unknown function DUF328 K09861 K09861; uncharacterized protein D Patl_3339 protein of unknown function DUF329 K09862 K09862; uncharacterized protein D Patl_3942 protein of unknown function DUF416 K09891 K09891; uncharacterized protein D Patl_0012 protein of unknown function DUF414 K09894 K09894; uncharacterized protein D Patl_3503 yecA family protein K09895 K09895; uncharacterized protein D Patl_0623 protein of unknown function DUF413 K09897 K09897; uncharacterized protein D Patl_0135 protein of unknown function UPF0270 K09898 K09898; uncharacterized protein D Patl_2369 protein of unknown function DUF412 K09899 K09899; uncharacterized protein D Patl_2802 protein of unknown function DUF709 K09902 K09902; uncharacterized protein D Patl_3379 protein of unknown function DUF1414 K09904 K09904; uncharacterized protein D Patl_0552 conserved hypothetical protein K09908 K09908; uncharacterized protein D Patl_1389 Uncharacterized conserved protein UCP006287 K09910 K09910; uncharacterized protein D Patl_2355 conserved hypothetical protein K09912 K09912; uncharacterized protein D Patl_1161 protein of unknown function DUF480 K09915 K09915; uncharacterized protein D Patl_1644 protein of unknown function DUF1315 K09916 K09916; uncharacterized protein D Patl_1244 conserved hypothetical protein K09918 K09918; uncharacterized protein D Patl_3017 protein of unknown function DUF482 K09919 K09919; uncharacterized protein D Patl_0432 protein of unknown function DUF1249 K09920 K09920; uncharacterized protein D Patl_4075 protein of unknown function DUF484 K09921 K09921; uncharacterized protein D Patl_1954 protein of unknown function DUF469 K09923 K09923; uncharacterized protein D Patl_2850 hypothetical protein K09924 K09924; uncharacterized protein D Patl_2069 conserved hypothetical protein K09926 K09926; uncharacterized protein D Patl_2519 protein of unknown function DUF1006 K09927 K09927; uncharacterized protein D Patl_1778 conserved hypothetical protein K09928 K09928; uncharacterized protein D Patl_2899 conserved hypothetical protein K09929 K09929; uncharacterized protein D Patl_2900 protein of unknown function DUF692 K09930 K09930; uncharacterized protein D Patl_0216 conserved hypothetical protein K09937 K09937; uncharacterized protein D Patl_2488 conserved hypothetical protein K09938 K09938; uncharacterized protein D Patl_3140 protein of unknown function DUF1415 K09941 K09941; uncharacterized protein D Patl_0621 protein of unknown function DUF1244 K09948 K09948; uncharacterized protein D Patl_0142 conserved hypothetical protein K09950 K09950; uncharacterized protein D Patl_0305 conserved hypothetical protein K09950 K09950; uncharacterized protein D Patl_0303 conserved hypothetical protein K09950 K09950; uncharacterized protein D Patl_1700 conserved hypothetical protein K09954 K09954; uncharacterized protein D Patl_0910 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein D Patl_1126 protein of unknown function DUF1348 K09958 K09958; uncharacterized protein D Patl_1461 conserved hypothetical protein K09964 K09964; uncharacterized protein D Patl_0918 conserved hypothetical protein K09967 K09967; uncharacterized protein D Patl_2535 GumN K09973 K09973; uncharacterized protein D Patl_2138 Uncharacterized conserved protein UCP025560 K09978 K09978; uncharacterized protein D Patl_1225 conserved hypothetical protein K09980 K09980; uncharacterized protein D Patl_2237 protein of unknown function DUF1272 K09984 K09984; uncharacterized protein D Patl_4276 protein of unknown function DUF1285 K09986 K09986; uncharacterized protein D Patl_2515 conserved hypothetical protein K09989 K09989; uncharacterized protein D Patl_2016 conserved hypothetical protein K09992 K09992; uncharacterized protein D Patl_3320 protein of unknown function DUF47 K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024