+D GENES KO
#
KEGG Orthology (KO) - Parabacteroides distasonis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pdi00010]
D BDI_1250 hexokinase type III K00844 HK; hexokinase [EC:2.7.1.1]
D BDI_3589 putative transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1628 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_2878 ROK family transcriptional repressor, with glucokinase domain K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1863 transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1749 ROK family transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_3292 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_0148 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BDI_3293 putative thermophilic glucose-6-phosphate isomerase-like protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D BDI_3291 putative glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D BDI_3741 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BDI_2830 putative 6-phosphofructokinase 2 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D BDI_1519 phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D BDI_3671 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D BDI_1480 putative fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D BDI_1944 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BDI_2695 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BDI_0287 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BDI_0672 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BDI_0596 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BDI_2656 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BDI_0260 putative phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BDI_3395 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BDI_2351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BDI_3302 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BDI_1031 pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0690 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_1391 ketoisovalerate oxidoreductase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D BDI_2807 putative oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D BDI_1392 ketoisovalerate oxidoreductase subunit VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D BDI_2806 oxidoreductase, putative K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D BDI_2255 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BDI_3750 putative aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D BDI_1664 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D BDI_1644 putative haloacid dehalogenase-like hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D BDI_2097 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BDI_2805 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:pdi00020]
D BDI_1076 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D BDI_1074 putative aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D BDI_1075 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D BDI_0688 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0690 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_1391 ketoisovalerate oxidoreductase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D BDI_2807 putative oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D BDI_1392 ketoisovalerate oxidoreductase subunit VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D BDI_2806 oxidoreductase, putative K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D BDI_1393 ketoisovalerate oxidoreductase subunit vorA K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D BDI_3209 fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BDI_3208 fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BDI_3210 putative cytochrome B subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BDI_2765 fumarate hydratase class I, anaerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D BDI_1650 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D BDI_0711 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BDI_0389 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BDI_2683 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D BDI_2805 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00030 Pentose phosphate pathway [PATH:pdi00030]
D BDI_0148 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BDI_3293 putative thermophilic glucose-6-phosphate isomerase-like protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D BDI_3291 putative glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D BDI_0647 putative glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BDI_0648 putative 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D BDI_0646 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BDI_1695 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BDI_1349 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BDI_1668 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BDI_2999 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D BDI_2118 putative ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D BDI_1669 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D BDI_2970 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D BDI_1657 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D BDI_2097 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BDI_3777 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BDI_3185 putative gluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D BDI_2661 gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D BDI_3186 putative gluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D BDI_1480 putative fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D BDI_1944 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BDI_3671 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D BDI_3741 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BDI_2830 putative 6-phosphofructokinase 2 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D BDI_1519 phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:pdi00040]
D BDI_3184 uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D BDI_0376 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D BDI_1463 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_3822 putative nucleotide-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_0441 uridine diphosphate glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_3238 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_2215 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_0280 conserved hypothetical protein, putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D BDI_1903 conserved hypothetical protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D BDI_1695 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BDI_1349 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BDI_0782 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D BDI_0783 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D BDI_1323 rhamnulose kinase/L-fuculose kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D BDI_1320 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D BDI_0625 conserved hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D BDI_1350 conserved hypothetical protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D BDI_1841 pyrophosphorylase K21681 bcs1; ribitol-5-phosphate 2-dehydrogenase (NADP+) / D-ribitol-5-phosphate cytidylyltransferase [EC:1.1.1.405 2.7.7.40]
D BDI_1351 nucleotidyltransferase family protein K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
D BDI_3828 putative CDP-ribitol pyrophosphorylase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
C 00051 Fructose and mannose metabolism [PATH:pdi00051]
D BDI_0060 glycoside hydrolase family 26, candidate beta-glycosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D BDI_3374 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D BDI_1483 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D BDI_2901 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D BDI_1725 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BDI_1691 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D BDI_3306 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BDI_3226 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BDI_2201 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BDI_2203 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D BDI_0652 GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D BDI_2202 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D BDI_0651 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D BDI_1322 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D BDI_1323 rhamnulose kinase/L-fuculose kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D BDI_1320 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D BDI_1250 hexokinase type III K00844 HK; hexokinase [EC:2.7.1.1]
D BDI_3741 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BDI_2830 putative 6-phosphofructokinase 2 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D BDI_1519 phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D BDI_3671 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D BDI_1350 conserved hypothetical protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D BDI_0783 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D BDI_1480 putative fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D BDI_1944 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BDI_2695 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BDI_3373 glycoside hydrolase family 32, candidate levanase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D BDI_1669 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:pdi00052]
D BDI_3750 putative aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D BDI_1664 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D BDI_1666 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D BDI_0510 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BDI_2097 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BDI_1250 hexokinase type III K00844 HK; hexokinase [EC:2.7.1.1]
D BDI_3589 putative transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1628 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_2878 ROK family transcriptional repressor, with glucokinase domain K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1863 transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1749 ROK family transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_3292 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_0983 glycoside hydrolase family 2, candidate beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_3103 glycoside hydrolase family 2, candidate beta-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_1976 glycoside hydrolase family 2, candidate beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_0230 glycoside hydrolase family 2, candidate beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_3296 glycoside hydrolase family 2, candidate beta-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_1518 glycoside hydrolase family 35, candidate beta-glycosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D BDI_0089 glycoside hydrolase family 36, candidate alpha-glycosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D BDI_0447 glycoside hydrolase family 36, candidate alpha-glycosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D BDI_3741 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BDI_2830 putative 6-phosphofructokinase 2 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D BDI_0535 glycoside hydrolase family 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D BDI_3129 glycoside hydrolase family 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D BDI_2880 glycoside hydrolase family 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D BDI_3541 glycoside hydrolase family 13, candidate alpha-glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D BDI_0930 glycoside hydrolase family 13, candidate alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:pdi00053]
D BDI_1463 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_3822 putative nucleotide-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_0441 uridine diphosphate glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_3238 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_2215 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_2661 gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D BDI_0280 conserved hypothetical protein, putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D BDI_1903 conserved hypothetical protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
C 00500 Starch and sucrose metabolism [PATH:pdi00500]
D BDI_0535 glycoside hydrolase family 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D BDI_3129 glycoside hydrolase family 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D BDI_2880 glycoside hydrolase family 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D BDI_3541 glycoside hydrolase family 13, candidate alpha-glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D BDI_1208 glycoside hydrolase family 3, candidate beta-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_2428 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_0369 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3067 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3068 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3104 glycoside hydrolase family 3, candidate beta-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_0212 glycosyltransferase family 5 K00703 glgA; starch synthase [EC:2.4.1.21]
D BDI_0209 glycosyltransferase family 4 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D BDI_1726 glycoside hydrolase family 13, candidate 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D BDI_2005 glycosyltransferase family 35, candidate alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D BDI_0931 glycoside hydrolase family 13, candidate alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D BDI_0210 glycoside hydrolase family 57, candidate alpha-glycosidase K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1]
D BDI_0930 glycoside hydrolase family 13, candidate alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D BDI_0003 glycoside hydrolase family 77, candidate 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D BDI_3927 glycosyltransferase family 20, candidate bifunctional trehalose-6-phosphate synthase/trehalose-6-phosphate phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D BDI_3926 glycoside hydrolase family 15, candidate alpha-glycosidase K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28]
D BDI_2097 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BDI_1250 hexokinase type III K00844 HK; hexokinase [EC:2.7.1.1]
D BDI_3589 putative transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1628 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_2878 ROK family transcriptional repressor, with glucokinase domain K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1863 transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1749 ROK family transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_3292 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_0148 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BDI_3293 putative thermophilic glucose-6-phosphate isomerase-like protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D BDI_3291 putative glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D BDI_3374 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D BDI_1483 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D BDI_2901 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pdi00520]
D BDI_0665 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_2521 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_1272 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_0050 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_0236 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D BDI_0237 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D BDI_3152 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D BDI_0238 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D BDI_3568 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D BDI_1250 hexokinase type III K00844 HK; hexokinase [EC:2.7.1.1]
D BDI_3374 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D BDI_1483 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D BDI_2901 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D BDI_0080 putative sugar phosphate isomerase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D BDI_3807 mannose-1-phosphate guanyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D BDI_0477 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BDI_1148 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BDI_2942 renin-binding protein-related protein K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8]
D BDI_1864 putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D BDI_2941 probable N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D BDI_1577 putative UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D BDI_0043 putative UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D BDI_1578 putative UDP-ManNAc dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D BDI_0025 putative UDP-ManNAc dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D BDI_2789 putative dehydrogenase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D BDI_2790 putative aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D BDI_2184 hexapeptide transferase family protein, putative acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D BDI_0026 nucleoside-diphosphate-sugar epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D BDI_0027 putative UDP-glucose-6 dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D BDI_1308 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D BDI_2219 putative UDP-glucose-6 dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D BDI_0572 putative dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D BDI_3831 putative dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D BDI_1564 glycoside hydrolase family 51, candidate alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D BDI_1274 glycoside hydrolase family 51 K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D BDI_1938 glycoside hydrolase family 51, candidate alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D BDI_1050 putative NAD dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D BDI_3626 putative nucleotide-sugar dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D BDI_3829 putative dTDP-glucose 4-6-dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D BDI_3065 glycoside hydrolase family 43; central CBM32 module K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D BDI_2179 glycoside hydrolase family 43, candidate beta-glycosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D BDI_3589 putative transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1628 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_2878 ROK family transcriptional repressor, with glucokinase domain K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1863 transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1749 ROK family transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_3292 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_2097 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BDI_1463 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_3822 putative nucleotide-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_0441 uridine diphosphate glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_3238 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_2215 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_1666 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D BDI_0510 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BDI_0148 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BDI_3293 putative thermophilic glucose-6-phosphate isomerase-like protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D BDI_3291 putative glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D BDI_1725 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BDI_1691 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D BDI_3306 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BDI_3226 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BDI_2201 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BDI_2203 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D BDI_0652 GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D BDI_0127 putative aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D BDI_2202 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D BDI_0651 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D BDI_1573 conserved hypothetical protein K25314 FKGP; fucokinase / fucose-1-phosphate guanylyltransferase [EC:2.7.1.52 2.7.7.30]
C 00620 Pyruvate metabolism [PATH:pdi00620]
D BDI_2255 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BDI_1391 ketoisovalerate oxidoreductase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D BDI_2807 putative oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D BDI_1392 ketoisovalerate oxidoreductase subunit VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D BDI_2806 oxidoreductase, putative K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0690 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_3392 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D BDI_3370 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BDI_3369 phosphotransacetylase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BDI_3302 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BDI_0076 putative biotin carboxylase 1 K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BDI_0987 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D BDI_1057 putative dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D BDI_3420 oxidoreductase, FAD/iron-sulfur cluster-binding domain protein K18930 dld; D-lactate dehydrogenase
D BDI_2087 aldehyde dehydrogenase A K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D BDI_3588 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D BDI_0468 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D BDI_2955 conserved hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D BDI_1733 NADP-dependent malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D BDI_1670 carboxylase, putative K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D BDI_2684 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BDI_0160 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BDI_2682 putative oxaloacetate decarboxylase gamma chain 1 K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D BDI_2683 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D BDI_0711 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BDI_0389 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BDI_2765 fumarate hydratase class I, anaerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D BDI_1650 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D BDI_2805 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D BDI_1031 pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D BDI_2064 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pdi00630]
D BDI_2255 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BDI_0711 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BDI_0389 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BDI_1076 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D BDI_1074 putative aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D BDI_0164 lactoylglutathione lyase and related protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D BDI_0075 propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D BDI_2303 methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D BDI_2302 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D BDI_1740 catalase K03781 katE; catalase [EC:1.11.1.6]
D BDI_2621 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D BDI_3848 putative phosphatase, HAD family K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D BDI_0320 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3771 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3923 glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_1271 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BDI_0467 glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D BDI_0312 putative aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0690 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_3171 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D BDI_1641 conserved hypothetical protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D BDI_3122 conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D BDI_2087 aldehyde dehydrogenase A K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D BDI_3185 putative gluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:pdi00640]
D BDI_2255 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BDI_3370 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BDI_3369 phosphotransacetylase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BDI_0687 2-oxoisovalerate dehydrogenase beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0690 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_3392 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D BDI_0076 putative biotin carboxylase 1 K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BDI_0075 propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D BDI_0164 lactoylglutathione lyase and related protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D BDI_2303 methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D BDI_2302 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D BDI_2060 putative methylglyoxyl synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D BDI_0696 alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D BDI_0585 putative alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:pdi00650]
D BDI_2684 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BDI_0160 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BDI_0161 biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D BDI_3209 fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BDI_3208 fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BDI_3210 putative cytochrome B subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BDI_0821 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D BDI_3392 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D BDI_1391 ketoisovalerate oxidoreductase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D BDI_2807 putative oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D BDI_1392 ketoisovalerate oxidoreductase subunit VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D BDI_2806 oxidoreductase, putative K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D BDI_2170 putative zinc-type alcohol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D BDI_2072 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BDI_2071 acetohydroxyacid synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pdi00660]
D BDI_2072 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BDI_2071 acetohydroxyacid synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D BDI_2061 2-isopropylmalate synthase LeuA K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21]
D BDI_2063 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D BDI_2062 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D BDI_2059 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pdi00562]
D BDI_2667 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D BDI_1154 probable NADH-dependent dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D BDI_2741 conserved hypothetical protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D BDI_0314 conserved hypothetical protein K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D BDI_3797 conserved hypothetical protein K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D BDI_2695 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pdi00190]
D BDI_0054 putative NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D BDI_3209 fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BDI_3208 fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BDI_3210 putative cytochrome B subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BDI_2648 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D BDI_2649 cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D BDI_0264 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BDI_0271 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BDI_0263 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BDI_0265 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BDI_0270 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BDI_0268 ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BDI_0266 ATP synthase B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BDI_0267 putative ATP synthase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BDI_0827 V-type ATPase, subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D BDI_0828 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D BDI_0829 V-type ATPase, subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D BDI_0825 ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D BDI_0830 V-type ATPase, subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D BDI_0831 V-type ATPase, subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D BDI_2189 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:pdi00680]
D BDI_1271 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BDI_3395 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BDI_2351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BDI_0711 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BDI_0389 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BDI_1480 putative fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D BDI_1944 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BDI_3671 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D BDI_3741 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BDI_2830 putative 6-phosphofructokinase 2 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D BDI_3370 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BDI_3369 phosphotransacetylase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BDI_2255 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BDI_0596 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BDI_2656 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BDI_0260 putative phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BDI_0506 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D BDI_0505 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BDI_1107 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pdi00910]
D BDI_0109 cytochrome C552 precursor K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D BDI_0675 putative exported cytochrome c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D BDI_0108 quinol oxidase K15876 nrfH; cytochrome c nitrite reductase small subunit
D BDI_1721 6Fe-6S prismane cluster-containing protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D BDI_2594 conserved hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D BDI_3804 NAD-specific glutamate dehydrogenase 1 K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D BDI_3809 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D BDI_0320 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3771 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3923 glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_0326 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D BDI_0325 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D BDI_3682 putative NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D BDI_1768 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pdi00920]
D BDI_0796 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BDI_0795 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D BDI_0794 putative adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D BDI_0792 sulfite synthesis pathway protein CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D BDI_1693 conserved hypothetical protein, putative exopolyphosphatase-related protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D BDI_3421 conserved hypothetical protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D BDI_2645 hypothetical protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D BDI_0040 putative serine acetyltransferase, putative hexapeptide transferase family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BDI_3092 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BDI_1041 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BDI_0970 putative cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D BDI_1490 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pdi00061]
D BDI_0076 putative biotin carboxylase 1 K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BDI_0568 putative acyl carrier protein K02078 acpP; acyl carrier protein
D BDI_0565 putative acyl carrier protein K02078 acpP; acyl carrier protein
D BDI_1760 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BDI_3631 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BDI_2436 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BDI_0567 3-oxoacyl-[acyl-carrier-protein] synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BDI_1497 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BDI_2827 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BDI_0189 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_1496 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_0570 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_2105 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D BDI_3383 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BDI_1603 putative dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D BDI_0527 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_2754 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_0051 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_0615 long-chain-fatty-acid-CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D BDI_0527 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_2754 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_0051 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_0615 long-chain-fatty-acid-CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:pdi00121]
D BDI_1550 putative choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pdi00561]
D BDI_3122 conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D BDI_0629 conserved hypothetical protein K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D BDI_0630 dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D BDI_1816 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D BDI_2331 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BDI_1953 putative diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D BDI_0089 glycoside hydrolase family 36, candidate alpha-glycosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D BDI_0447 glycoside hydrolase family 36, candidate alpha-glycosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:pdi00564]
D BDI_0149 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D BDI_1817 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D BDI_2331 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BDI_1953 putative diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D BDI_0074 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D BDI_0402 putative glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D BDI_3922 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D BDI_0188 glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
D BDI_1855 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D BDI_2569 CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D BDI_2570 phosphatidylserine decarboxylase-related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D BDI_2500 putative cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:pdi00565]
D BDI_0074 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:pdi00600]
D BDI_1787 glycoside hydrolase family 30, candidate beta-glycosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D BDI_3785 glycoside hydrolase family 30, candidate beta-glycosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D BDI_3128 conserved hypothetical protein K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45]
D BDI_0983 glycoside hydrolase family 2, candidate beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_3103 glycoside hydrolase family 2, candidate beta-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_1976 glycoside hydrolase family 2, candidate beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_0230 glycoside hydrolase family 2, candidate beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_3296 glycoside hydrolase family 2, candidate beta-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_2610 choline-sulfatase K01130 E3.1.6.1; arylsulfatase [EC:3.1.6.1]
D BDI_2321 arylsulfatase A K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D BDI_2079 arylsulfatase A K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D BDI_2946 glycoside hydrolase family 33, candidate sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D BDI_0089 glycoside hydrolase family 36, candidate alpha-glycosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D BDI_0447 glycoside hydrolase family 36, candidate alpha-glycosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D BDI_0665 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_2521 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_1272 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_0050 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D BDI_0074 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D BDI_0074 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:pdi00592]
D BDI_0074 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pdi00230]
D BDI_2097 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BDI_3777 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BDI_0310 amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BDI_0578 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BDI_3095 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D BDI_2826 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D BDI_3578 phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D BDI_2525 putative phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D BDI_2101 putative phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D BDI_3172 phosphoribosylaminoimidazole carboxylase, PurE protein K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D BDI_1987 phosphoribosylamidoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D BDI_3725 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BDI_1885 phosphoribosylaminoimidazole carboxy formyl formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BDI_1439 2',3'-cyclic nucleotide 2'-phosphodiesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D BDI_2635 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D BDI_1085 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D BDI_1896 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BDI_1899 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D BDI_0090 putative inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BDI_2393 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BDI_1575 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BDI_3010 putative xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D BDI_1502 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D BDI_1828 putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BDI_1829 glutaminne-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BDI_1128 guanine aminohydrolase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D BDI_0156 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D BDI_0002 putative ribonucleoside reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BDI_3407 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D BDI_3378 dGTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D BDI_2052 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BDI_2550 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BDI_3761 conserved hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D BDI_3782 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BDI_1116 putative AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D BDI_2966 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D BDI_1795 putative 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D BDI_1898 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D BDI_0794 putative adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D BDI_0796 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BDI_0795 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:pdi00240]
D BDI_0431 carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BDI_0580 carbamyl phosphate synthetase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BDI_3425 glutamine-dependent carbamyl phosphate synthetase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BDI_3619 conserved hypothetical protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BDI_0579 carbamoyl phosphate synthetase III K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BDI_0841 aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D BDI_0840 aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D BDI_1301 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D BDI_1112 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D BDI_1113 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D BDI_0543 dihydroorotate dehydrogenase family protein K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D BDI_3691 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D BDI_2103 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D BDI_3371 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D BDI_1575 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BDI_0169 septum formation protein, Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D BDI_0519 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D BDI_3739 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D BDI_0815 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D BDI_3155 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D BDI_1439 2',3'-cyclic nucleotide 2'-phosphodiesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D BDI_2635 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D BDI_2117 phosphorylase family protein K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D BDI_1151 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D BDI_1795 putative 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D BDI_2098 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D BDI_3407 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D BDI_0002 putative ribonucleoside reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BDI_0206 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D BDI_3174 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BDI_0707 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D BDI_3749 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D BDI_1170 oxidoreductase iron-sulfur protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pdi00250]
D BDI_3491 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_2026 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_3033 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D BDI_1705 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D BDI_1755 asparaginase family protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D BDI_3717 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D BDI_0324 glutamine-hydrolyzing asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BDI_2001 putative amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D BDI_1073 putative aspartate decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D BDI_0483 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D BDI_2808 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D BDI_0593 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D BDI_0069 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D BDI_3689 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D BDI_3782 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BDI_3725 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BDI_0841 aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D BDI_0840 aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D BDI_0821 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D BDI_0326 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D BDI_0325 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D BDI_3682 putative NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D BDI_3804 NAD-specific glutamate dehydrogenase 1 K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D BDI_3809 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D BDI_2252 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D BDI_0320 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3771 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3923 glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_0431 carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BDI_0580 carbamyl phosphate synthetase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BDI_3425 glutamine-dependent carbamyl phosphate synthetase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BDI_3619 conserved hypothetical protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BDI_0579 carbamoyl phosphate synthetase III K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BDI_0820 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D BDI_0310 amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BDI_0578 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pdi00260]
D BDI_2021 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BDI_3936 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BDI_0261 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D BDI_3269 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BDI_0259 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D BDI_1505 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D BDI_1271 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BDI_3122 conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D BDI_0596 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BDI_2656 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BDI_0260 putative phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BDI_0506 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D BDI_0505 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BDI_1107 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D BDI_1237 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D BDI_2951 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D BDI_0467 glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D BDI_0312 putative aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0690 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_3171 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D BDI_2569 CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D BDI_1340 L-serine dehydratase, iron-sulfur-dependent, single chain form K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D BDI_1979 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D BDI_0586 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D BDI_0592 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D BDI_3266 tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pdi00270]
D BDI_0040 putative serine acetyltransferase, putative hexapeptide transferase family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BDI_3092 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BDI_1041 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BDI_0970 putative cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D BDI_2080 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BDI_0982 putative aminotransferase B K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BDI_0415 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D BDI_2403 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BDI_1896 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BDI_1084 chlorohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D BDI_2280 translation initiation factor eIF-2B alpha subunit K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D BDI_1186 putative GAF domain-containing protein involved in signal transduction K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D BDI_3001 site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BDI_0861 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BDI_2775 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D BDI_2021 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BDI_3936 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BDI_0261 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D BDI_3269 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BDI_1490 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D BDI_3768 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D BDI_2552 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D BDI_1775 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BDI_3491 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_2026 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_1073 putative aspartate decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D BDI_0430 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D BDI_0711 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BDI_0389 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BDI_1340 L-serine dehydratase, iron-sulfur-dependent, single chain form K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D BDI_0506 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D BDI_0505 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pdi00280]
D BDI_1775 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BDI_0687 2-oxoisovalerate dehydrogenase beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0690 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0075 propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D BDI_0164 lactoylglutathione lyase and related protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D BDI_2303 methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D BDI_2302 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pdi00290]
D BDI_1979 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D BDI_2061 2-isopropylmalate synthase LeuA K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21]
D BDI_2063 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D BDI_2062 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D BDI_2059 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D BDI_2072 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BDI_2071 acetohydroxyacid synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D BDI_2069 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D BDI_2073 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D BDI_0172 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D BDI_1775 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BDI_2064 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pdi00300]
D BDI_2021 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BDI_3936 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BDI_0261 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D BDI_3269 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BDI_0801 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D BDI_2847 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D BDI_0067 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D BDI_0322 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D BDI_0321 aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D BDI_1378 putative aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D BDI_3837 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D BDI_2022 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D BDI_3565 putative oxidoreductase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D BDI_1252 aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D BDI_2491 probable UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BDI_3366 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BDI_3384 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:pdi00310]
D BDI_0688 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0690 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0607 conserved hypothetical protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:pdi00220]
D BDI_0069 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D BDI_3689 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D BDI_1757 arginase K01476 rocF; arginase [EC:3.5.3.1]
D BDI_2672 arginase K01476 rocF; arginase [EC:3.5.3.1]
D BDI_0820 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D BDI_0320 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3771 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3923 glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3804 NAD-specific glutamate dehydrogenase 1 K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D BDI_3809 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D BDI_3491 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_2026 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_0488 putative acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D BDI_0068 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D BDI_0067 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D BDI_3099 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pdi00330]
D BDI_1202 conserved hypothetical protein K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D BDI_1176 conserved hypothetical protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D BDI_1175 glycosylhydrolase of carbon-nitrogen family, putative beta-ureidopropionase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D BDI_0940 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D BDI_1432 acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D BDI_0429 putative acetyltransferase, GNAT family K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D BDI_1757 arginase K01476 rocF; arginase [EC:3.5.3.1]
D BDI_2672 arginase K01476 rocF; arginase [EC:3.5.3.1]
D BDI_2673 acetylornithine aminotransferase, putative K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D BDI_2250 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D BDI_2251 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D BDI_2252 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D BDI_2256 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D BDI_2257 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D BDI_0786 formate C-acetyltransferase K23121 pflD; trans-4-hydroxy-L-proline dehydratase [EC:4.2.1.172]
D BDI_3491 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_2026 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pdi00340]
D BDI_0966 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D BDI_2019 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D BDI_2017 imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D BDI_2016 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D BDI_2018 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D BDI_0969 histidine biosynthesis bifunctional protein hisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D BDI_0968 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BDI_1238 putative histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D BDI_0967 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D BDI_3648 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D BDI_3644 putative urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D BDI_3646 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D BDI_3645 formiminotransferase-cyclodeaminase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:pdi00350]
D BDI_3491 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_2026 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_0968 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:pdi00360]
D BDI_1194 phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D BDI_2838 putative phenylacetic acid degradation protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D BDI_3491 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_2026 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_0968 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:pdi00380]
D BDI_0688 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0690 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_1740 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pdi00400]
D BDI_2542 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D BDI_3301 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D BDI_2809 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D BDI_3146 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D BDI_2082 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D BDI_0591 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D BDI_0590 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D BDI_0589 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D BDI_0587 N-(5'-phosphoribosyl) anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D BDI_0588 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D BDI_0586 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D BDI_0592 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D BDI_3266 tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D BDI_1379 putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D BDI_1380 chorismate mutase/prephenate dehydratase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D BDI_1377 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D BDI_3491 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_2026 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_0968 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pdi00410]
D BDI_0214 aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D BDI_0821 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D BDI_0213 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D BDI_1170 oxidoreductase iron-sulfur protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
C 00430 Taurine and hypotaurine metabolism [PATH:pdi00430]
D BDI_0821 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D BDI_0483 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D BDI_2808 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D BDI_3369 phosphotransacetylase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BDI_3370 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:pdi00440]
D BDI_2852 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D BDI_2851 serine-pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D BDI_0188 glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
D BDI_1147 metal-dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pdi00450]
D BDI_2080 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BDI_0982 putative aminotransferase B K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BDI_0415 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D BDI_3543 aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D BDI_0401 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BDI_0796 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BDI_0795 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D BDI_2791 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pdi00460]
D BDI_1208 glycoside hydrolase family 3, candidate beta-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_2428 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_0369 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3067 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3068 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3104 glycoside hydrolase family 3, candidate beta-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_1705 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D BDI_1755 asparaginase family protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D BDI_3717 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D BDI_1271 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pdi00470]
D BDI_3384 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D BDI_2675 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BDI_0820 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D BDI_3702 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BDI_2489 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BDI_0430 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D BDI_0322 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D BDI_3837 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D BDI_2022 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:pdi00480]
D BDI_0965 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D BDI_2582 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BDI_2092 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BDI_1075 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D BDI_0646 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BDI_0647 putative glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pdi00511]
D BDI_2946 glycoside hydrolase family 33, candidate sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D BDI_0983 glycoside hydrolase family 2, candidate beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_3103 glycoside hydrolase family 2, candidate beta-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_1976 glycoside hydrolase family 2, candidate beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_0230 glycoside hydrolase family 2, candidate beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_3296 glycoside hydrolase family 2, candidate beta-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D BDI_0665 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_2521 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_1272 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_0050 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_0244 glycoside hydrolase family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D BDI_2739 glycoside hydrolase family 29 K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D BDI_2423 glycoside hydrolase family 95 K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D BDI_1787 glycoside hydrolase family 30, candidate beta-glycosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D BDI_3785 glycoside hydrolase family 30, candidate beta-glycosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D BDI_3128 conserved hypothetical protein K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:pdi00540]
D BDI_2106 acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D BDI_2105 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D BDI_2104 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D BDI_2591 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D BDI_2636 glycosyltransferase family 19, candidate lipid-alpha-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D BDI_3942 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D BDI_2900 putative sugar isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D BDI_0285 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D BDI_0168 putative hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D BDI_0522 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D BDI_2631 putative deoxyoctulonosic acid synthetase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D BDI_2288 glycosyltransferase family 30 K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D BDI_0047 putative acetyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pdi00541]
D BDI_0510 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BDI_1463 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_3822 putative nucleotide-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_0441 uridine diphosphate glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_3238 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_2215 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BDI_0650 putative glucose-1-phosphate thymidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BDI_3616 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BDI_1834 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BDI_1833 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D BDI_2511 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D BDI_0573 putative reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D BDI_1725 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BDI_1691 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D BDI_3306 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BDI_3226 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BDI_2201 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BDI_2203 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D BDI_0652 GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D BDI_2202 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D BDI_0651 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D BDI_0127 putative aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D BDI_1577 putative UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D BDI_0043 putative UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D BDI_1578 putative UDP-ManNAc dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D BDI_0025 putative UDP-ManNAc dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D BDI_0572 putative dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D BDI_3831 putative dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D BDI_3832 capsular polysaccharide biosynthesis protein Cps4K K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D BDI_3833 putative UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D BDI_0574 putative UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D BDI_0027 putative UDP-glucose-6 dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D BDI_1308 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D BDI_2219 putative UDP-glucose-6 dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D BDI_2789 putative dehydrogenase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D BDI_2790 putative aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D BDI_2184 hexapeptide transferase family protein, putative acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D BDI_0026 nucleoside-diphosphate-sugar epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:pdi00550]
D BDI_0477 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BDI_1148 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BDI_2486 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BDI_2489 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BDI_2491 probable UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BDI_2675 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BDI_3366 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BDI_3384 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D BDI_3698 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BDI_2407 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BDI_0953 putative membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BDI_2490 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BDI_2487 glycosyltransferase family 28, candidate undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BDI_0528 glycosyltransferase family 51, candidate monofunctional monofunctional peptidoglycan glycosyltransferase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D BDI_1818 glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BDI_0932 glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D BDI_1881 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BDI_2492 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BDI_3358 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:pdi00552]
D BDI_2407 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BDI_0953 putative membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BDI_1348 putative glycero-phosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D BDI_3830 putative teichoic acid biosynthesis protein F K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D BDI_3627 lipopolysaccharide biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D BDI_1840 lipopolysaccharide biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D BDI_1471 putative lipopolysaccharide biosynthsis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D BDI_1413 putative cholinephosphotransferase K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pdi00543]
D BDI_2205 acetyltransferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D BDI_0042 glycosyltransferase family 26 K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D BDI_0960 putative alginate O-acetyltransferase K19294 algI; alginate O-acetyltransferase complex protein AlgI
D BDI_1486 alginate O-acetylation protein, putative alginate o-acetyltransferase K19294 algI; alginate O-acetyltransferase complex protein AlgI
D BDI_0040 putative serine acetyltransferase, putative hexapeptide transferase family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BDI_3092 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BDI_1041 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pdi00730]
D BDI_1059 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D BDI_1062 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D BDI_2664 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BDI_1609 thiamine biosynthetic enzyme K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D BDI_1060 putative thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D BDI_1061 thiamine phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D BDI_3941 putative thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D BDI_3377 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D BDI_0912 alkaline phosphatase, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BDI_3180 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BDI_3529 conserved hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D BDI_1898 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pdi00740]
D BDI_3492 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D BDI_3695 riboflavin biosynthesis protein ribD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D BDI_1214 putative hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D BDI_0508 haloacid dehalogenase-like hydrolase K21063 K21063; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D BDI_0200 putative 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D BDI_0352 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D BDI_3100 putative riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:pdi00750]
D BDI_2095 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D BDI_1722 pyridoxal kinase, putative K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D BDI_2825 erythronate-4-phosphate dehydrogenase, putative K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D BDI_0505 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BDI_1545 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D BDI_0259 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pdi00760]
D BDI_3033 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D BDI_3014 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D BDI_2086 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D BDI_1085 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D BDI_1439 2',3'-cyclic nucleotide 2'-phosphodiesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D BDI_2635 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D BDI_0155 putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D BDI_3476 putative NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D BDI_0318 putative glutamine-dependent NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D BDI_0533 competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D BDI_2710 transcriptional regulator K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D BDI_1543 putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:pdi00770]
D BDI_2072 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D BDI_2071 acetohydroxyacid synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D BDI_2069 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D BDI_2073 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D BDI_0172 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D BDI_0812 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D BDI_1723 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D BDI_0213 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D BDI_2301 conserved hypothetical protein K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33]
D BDI_0179 putative regulatory protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D BDI_0697 flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D BDI_3348 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D BDI_1861 putative dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D BDI_1990 siderophore biosynthesis regulatory protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D BDI_1775 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BDI_1170 oxidoreductase iron-sulfur protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D BDI_0214 aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:pdi00780]
D BDI_1917 biotin synthesis protein, BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D BDI_2827 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BDI_0189 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_1496 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_0570 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_3383 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BDI_1916 conserved hypothetical protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D BDI_1915 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D BDI_1877 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D BDI_1914 adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D BDI_1918 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D BDI_1913 biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D BDI_2563 putative biotin-(acetyl-CoA carboxylase) synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pdi00785]
D BDI_0529 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D BDI_2192 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D BDI_0689 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0690 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0688 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D BDI_0687 2-oxoisovalerate dehydrogenase beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D BDI_0467 glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D BDI_0312 putative aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D BDI_3171 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pdi00790]
D BDI_2693 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D BDI_0912 alkaline phosphatase, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BDI_3180 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BDI_0005 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D BDI_2404 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D BDI_1459 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D BDI_3367 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D BDI_3748 putative dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BDI_0761 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D BDI_3492 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D BDI_1174 putative para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D BDI_1173 putative para-aminobenzoate synthase component I K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D BDI_1299 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D BDI_1300 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D BDI_3912 putative aluminum resistance protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D BDI_3913 conserved hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:pdi00670]
D BDI_3748 putative dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BDI_1014 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D BDI_0219 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BDI_3647 putative formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D BDI_1271 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BDI_2826 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D BDI_1885 phosphoribosylaminoimidazole carboxy formyl formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BDI_3645 formiminotransferase-cyclodeaminase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D BDI_1742 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BDI_0312 putative aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D BDI_0415 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D BDI_3749 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D BDI_1777 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D BDI_0204 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pdi00860]
D BDI_2289 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BDI_3054 possible uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D BDI_3207 putative Fe-S oxidoreductase K22226 ahbC; Fe-coproporphyrin III synthase
D BDI_1070 anaerobic cobalt chelatase CbiK K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D BDI_3410 putative heme-binding protein FetB K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D BDI_3409 anaerobic cobalt chelatase CbiK K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D BDI_1016 putative precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D BDI_1064 precorrin-6X reductase/cobalamin biosynthetic protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D BDI_1066 precorrin-6Y C5,15-methyltransferase, decarboxylating K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D BDI_0814 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D BDI_3327 ATP:cob(I)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D BDI_1239 putative ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D BDI_1360 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D BDI_3959 cobalamin biosynthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D BDI_3957 cobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D BDI_3955 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D BDI_3956 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, putative K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D BDI_3954 phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D BDI_2337 L-threonine-O-3-phosphate decarboxylase, putative K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D BDI_1362 putative bacterioferritin-related protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pdi00130]
D BDI_1988 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D BDI_1135 possible isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D BDI_1136 2-oxoglutarate decarboxylase and 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D BDI_1139 putative O-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D BDI_1137 dihydroxynapthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D BDI_1553 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pdi00900]
D BDI_2664 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BDI_0480 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D BDI_2700 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D BDI_3625 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D BDI_0715 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D BDI_2574 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D BDI_3173 putative GcpE terpenoid biosynthesis protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D BDI_3740 penicillin tolerance protein LytB K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D BDI_3736 putative isoprenoid biosynthesis related protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D BDI_2971 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D BDI_3698 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D BDI_1668 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pdi00523]
D BDI_0650 putative glucose-1-phosphate thymidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BDI_3616 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BDI_1834 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BDI_1833 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D BDI_2511 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D BDI_0573 putative reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D BDI_1135 possible isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D BDI_3616 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BDI_1834 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pdi00946]
D BDI_1208 glycoside hydrolase family 3, candidate beta-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_2428 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_0369 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3067 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3068 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3104 glycoside hydrolase family 3, candidate beta-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_1649 glycoside hydrolase family 78 K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D BDI_1318 glycoside hydrolase family 78 K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D BDI_3139 glycoside hydrolase family 78 K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D BDI_1317 glycoside hydrolase family 78 K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D BDI_1319 glycoside hydrolase family 78 K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D BDI_1796 glycoside hydrolase family 78 K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D BDI_2414 glycoside hydrolase family 78 K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:pdi00332]
D BDI_2256 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D BDI_2257 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pdi00261]
D BDI_0796 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BDI_0795 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D BDI_2021 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BDI_3936 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BDI_0261 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D BDI_3269 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BDI_0801 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D BDI_2847 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pdi00521]
D BDI_1250 hexokinase type III K00844 HK; hexokinase [EC:2.7.1.1]
D BDI_3589 putative transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1628 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_2878 ROK family transcriptional repressor, with glucokinase domain K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1863 transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1749 ROK family transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_3292 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_2097 phosphoglucomutase phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BDI_2667 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D BDI_1154 probable NADH-dependent dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D BDI_0650 putative glucose-1-phosphate thymidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BDI_3616 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BDI_1834 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BDI_1833 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D BDI_2511 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D BDI_0573 putative reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis [PATH:pdi00524]
D BDI_1250 hexokinase type III K00844 HK; hexokinase [EC:2.7.1.1]
D BDI_3589 putative transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1628 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_2878 ROK family transcriptional repressor, with glucokinase domain K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1863 transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_1749 ROK family transcriptional repressor K25026 glk; glucokinase [EC:2.7.1.2]
D BDI_3292 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pdi00525]
D BDI_0650 putative glucose-1-phosphate thymidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BDI_3616 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BDI_1834 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pdi00401]
D BDI_1380 chorismate mutase/prephenate dehydratase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D BDI_3491 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_2026 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_0968 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D BDI_0591 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D BDI_0590 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D BDI_1760 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BDI_0189 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_1496 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_0570 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_3383 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D BDI_0568 putative acyl carrier protein K02078 acpP; acyl carrier protein
D BDI_0565 putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pdi00999]
D BDI_2403 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BDI_1208 glycoside hydrolase family 3, candidate beta-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_2428 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_0369 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3067 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3068 glycoside hydrolase family 3, candidate beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D BDI_3104 glycoside hydrolase family 3, candidate beta-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pdi00362]
D BDI_0712 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D BDI_2684 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BDI_0160 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BDI_0161 biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D BDI_1812 stable NiFe hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D BDI_1811 putative uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D BDI_2661 gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pdi03020]
D BDI_2264 DNA-directed RNA polymerase, beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BDI_2263 DNA-directed RNA polymerase, beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BDI_2354 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pdi03010]
D BDI_2619 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BDI_3489 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BDI_2374 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BDI_2355 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BDI_2363 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BDI_3967 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BDI_2383 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BDI_2366 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BDI_3488 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BDI_2381 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BDI_2356 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BDI_2384 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BDI_2357 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BDI_2367 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BDI_2770 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BDI_1709 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BDI_2371 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BDI_3968 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BDI_2376 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BDI_3552 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BDI_2279 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BDI_2267 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BDI_2377 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BDI_2380 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BDI_2379 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BDI_2368 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BDI_2365 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BDI_2265 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BDI_3969 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BDI_2266 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BDI_2268 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BDI_3487 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BDI_2370 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BDI_2361 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BDI_2373 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BDI_2353 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BDI_2364 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BDI_2341 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BDI_0663 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BDI_0308 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BDI_2375 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BDI_2378 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BDI_2369 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BDI_0333 putative 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D BDI_0309 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BDI_0692 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BDI_2372 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BDI_2362 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BDI_1945 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BDI_0693 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BDI_0662 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BDI_2738 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_2861 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_3948 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_0133 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_2443 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_0363 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_1793 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_2858 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_1790 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_2440 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_0366 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_3951 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_2735 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_0136 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_0137 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_0367 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_1789 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_2734 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_3953 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_2857 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_2439 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pdi00970]
D BDI_0135 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_0365 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_2441 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_1791 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_3950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_2736 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_2859 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_3801 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_3718 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_0678 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_0676 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_0454 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_3556 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_0677 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_3653 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BDI_3655 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BDI_3654 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BDI_2015 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BDI_2014 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BDI_1429 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BDI_1832 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BDI_1831 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BDI_3059 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BDI_1851 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BDI_1852 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BDI_2304 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BDI_3551 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BDI_3553 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BDI_3687 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_3685 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_1086 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_0198 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_2274 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_0487 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_0220 tRNA-His K14226 tRNA-His; tRNA His
D BDI_0221 tRNA-His K14226 tRNA-His; tRNA His
D BDI_0134 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_2860 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_3949 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_1792 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_0364 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_2442 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_2737 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_1088 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_3307 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_1087 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_3788 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_3686 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_3194 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_3360 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BDI_1267 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BDI_1703 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BDI_1702 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BDI_3495 tRNA-Met K14230 tRNA-Met; tRNA Met
D BDI_0355 tRNA-Met K14230 tRNA-Met; tRNA Met
D BDI_1499 tRNA-Met K14230 tRNA-Met; tRNA Met
D BDI_2752 tRNA-Met K14230 tRNA-Met; tRNA Met
D BDI_3850 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BDI_3939 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BDI_0345 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BDI_3849 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BDI_2541 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BDI_1712 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_1701 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_1802 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_1478 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_1713 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_3734 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_2273 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BDI_1204 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BDI_2276 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BDI_0177 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BDI_3800 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BDI_2271 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BDI_3846 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BDI_1205 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BDI_0199 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BDI_2275 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BDI_3724 tRNA-Val K14237 tRNA-Val; tRNA Val
D BDI_3722 tRNA-Val K14237 tRNA-Val; tRNA Val
D BDI_3723 tRNA-Val K14237 tRNA-Val; tRNA Val
D BDI_0874 tRNA-Val K14237 tRNA-Val; tRNA Val
D BDI_2289 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BDI_1388 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BDI_2543 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BDI_1402 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BDI_3727 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BDI_3201 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BDI_0660 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BDI_0539 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BDI_2837 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BDI_2791 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BDI_1742 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BDI_3795 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BDI_3008 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BDI_0448 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BDI_0150 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BDI_3601 putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BDI_0989 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BDI_3784 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BDI_0836 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BDI_1234 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BDI_3058 putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BDI_3452 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pdi03060]
D BDI_2360 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D BDI_2270 putative preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D BDI_0195 putative protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D BDI_3608 protein-export membrane protein SecD/SecF K12257 secDF; SecD/SecF fusion protein
D BDI_1859 conserved hypothetical protein with conserved domain K03210 yajC; preprotein translocase subunit YajC
D BDI_0520 membrane protein, putative K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BDI_0484 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BDI_0218 putative signal recognition protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BDI_0941 recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BDI_1759 putative Sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D BDI_1758 putative Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
D BDI_2848 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BDI_2849 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BDI_3439 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BDI_0450 putative signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
C 03050 Proteasome
C 03018 RNA degradation [PATH:pdi03018]
D BDI_3395 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BDI_2351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BDI_2760 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BDI_1161 ATP-dependent RNA helicase DeaD K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D BDI_1397 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D BDI_3344 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D BDI_2906 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BDI_1747 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BDI_1162 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BDI_2394 ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BDI_1398 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BDI_1891 HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D BDI_3741 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BDI_1997 chaperone DnaK protein K04043 dnaK; molecular chaperone DnaK
D BDI_3787 chaperonin GroEL, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BDI_2189 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D BDI_2053 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pdi03030]
D BDI_2719 putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_0810 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_0695 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_3484 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BDI_2088 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BDI_1778 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BDI_1115 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BDI_0694 DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BDI_0669 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BDI_1289 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BDI_1848 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BDI_1290 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BDI_0868 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_1993 single-stranded binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_2814 ribonuclease H-related protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BDI_3545 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BDI_2972 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BDI_0799 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pdi03410]
D BDI_1143 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BDI_3716 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BDI_2034 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BDI_1994 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D BDI_2011 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D BDI_1724 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D BDI_1111 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BDI_1871 conserved hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BDI_1200 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D BDI_2972 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BDI_1746 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BDI_0799 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pdi03420]
D BDI_0616 putative transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BDI_0925 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D BDI_3283 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D BDI_0282 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D BDI_2967 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D BDI_0939 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BDI_2972 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BDI_0799 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pdi03430]
D BDI_2998 putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D BDI_1243 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D BDI_2387 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D BDI_0939 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BDI_2702 putative exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D BDI_2701 conserved hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D BDI_1746 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BDI_0868 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_1993 single-stranded binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_3484 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BDI_0694 DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BDI_2088 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BDI_1115 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BDI_1778 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BDI_2719 putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_0810 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_0695 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_0799 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BDI_0862 methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pdi03440]
D BDI_1746 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BDI_0868 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_1993 single-stranded binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_0202 putative DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D BDI_3555 conserved hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D BDI_1434 recombination protein RecR K06187 recR; recombination protein RecR
D BDI_1452 RecA K03553 recA; recombination protein RecA
D BDI_2972 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BDI_2660 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D BDI_2917 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BDI_3803 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BDI_2699 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BDI_2779 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BDI_3484 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BDI_0694 DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BDI_2088 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BDI_1115 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BDI_1778 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BDI_2719 putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_0810 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_0695 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_2298 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pdi02010]
D BDI_0492 putative molybdenum transport ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein
D BDI_1645 spermidine/putrescine ABC transporter K11069 potD; spermidine/putrescine transport system substrate-binding protein
D BDI_1646 putrescine transport system permease protein PotI K11070 potC; spermidine/putrescine transport system permease protein
D BDI_1647 putrescine transport system permease protein PotH K11071 potB; spermidine/putrescine transport system permease protein
D BDI_1648 spermidine/putrescine transport ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D BDI_0098 glycine betaine-binding protein precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D BDI_3857 glycine betaine-binding protein precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D BDI_0097 glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D BDI_3858 glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D BDI_0096 glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D BDI_3859 glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D BDI_3971 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D BDI_2401 conserved hypothetical protein, putative ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D BDI_2402 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D BDI_2592 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D BDI_2418 putative ABC transporter permease protein K02037 pstC; phosphate transport system permease protein
D BDI_2419 putative ABC transporter permease protein K02038 pstA; phosphate transport system permease protein
D BDI_2420 putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BDI_3081 putative zinc ABC transporter zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D BDI_3148 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D BDI_3082 putative metal ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D BDI_2025 putative transmembrane permease K09808 lolC_E; lipoprotein-releasing system permease protein
D BDI_3305 conserved hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D BDI_2882 lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BDI_3493 conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D BDI_0773 conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D BDI_2399 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D BDI_2409 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D BDI_2020 putative ATP-binding protein involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D BDI_2424 ABC transporter, ATP-binding protein, MsbA family K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:pdi03070]
D BDI_3352 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3572 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D BDI_0791 outer membrane protein, putative K12340 tolC; outer membrane protein
D BDI_0684 conserved hypothetical protein, putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_0346 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3329 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D BDI_3608 protein-export membrane protein SecD/SecF K12257 secDF; SecD/SecF fusion protein
D BDI_2270 putative preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D BDI_0195 putative protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D BDI_2360 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D BDI_1859 conserved hypothetical protein with conserved domain K03210 yajC; preprotein translocase subunit YajC
D BDI_0520 membrane protein, putative K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BDI_0484 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BDI_0941 recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BDI_0218 putative signal recognition protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BDI_1759 putative Sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D BDI_1758 putative Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pdi02020]
D BDI_2479 two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BDI_0991 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BDI_0912 alkaline phosphatase, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BDI_3180 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BDI_2592 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D BDI_0758 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D BDI_0359 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D BDI_1786 putative metal transport-related, exported protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D BDI_1784 putative copper/silver resistance-related transport membrane protein K07787 cusA; copper/silver efflux system protein
D BDI_3934 osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D BDI_3930 K+-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D BDI_3931 K+-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D BDI_3932 K+-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D BDI_3661 two-component system sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D BDI_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BDI_0763 two-component system response regulator K07672 trcR; two-component system, OmpR family, response regulator TrcR
D BDI_2821 two-component system response regulator K07672 trcR; two-component system, OmpR family, response regulator TrcR
D BDI_2438 two-component sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D BDI_0320 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3771 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3923 glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_0639 rteB, two-component system response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D BDI_3169 RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D BDI_0115 two-component system sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D BDI_3935 two-component system sensor histidine kinase, FrrD K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D BDI_1811 putative uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D BDI_1812 stable NiFe hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D BDI_1813 NiFe hydrogenase small subunit, HupC K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D BDI_0820 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D BDI_2648 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D BDI_2649 cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D BDI_3352 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3572 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D BDI_0791 outer membrane protein, putative K12340 tolC; outer membrane protein
D BDI_0684 conserved hypothetical protein, putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_0346 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3329 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D BDI_0017 polysaccharide export protein, BexD/CtrA/VexA family K01991 wza; polysaccharide biosynthesis/export protein
D BDI_1473 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D BDI_3241 polysaccharide export protein, BexD/CtrA/VexA family K01991 wza; polysaccharide biosynthesis/export protein
D BDI_0425 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D BDI_0124 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D BDI_2224 polysaccharide export protein, BexD/CtrA/VexA family K01991 wza; polysaccharide biosynthesis/export protein
D BDI_1596 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D BDI_2297 putative protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D BDI_0018 capsular polysaccharide transport protein, putative K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_0125 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_3240 putative tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_2223 putative tyrosine-protein kinase ptk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_1595 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_1472 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_0426 putative EPS related membrane protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_1577 putative UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D BDI_0043 putative UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D BDI_1578 putative UDP-ManNAc dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D BDI_0025 putative UDP-ManNAc dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D BDI_3124 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_3453 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_2477 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_2471 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_1305 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_3340 putative ECF-type RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_2336 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_3847 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_2856 putative ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_1686 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_1680 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_3961 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_3108 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_2325 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_0239 putative RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_1159 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_0240 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_2317 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_2324 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_2470 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_2872 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_3109 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_3115 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_3132 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_3455 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_3339 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_1905 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_2075 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_1678 putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_1681 conserved hypothetical protein, putative anti-sigma factor K07165 fecR; transmembrane sensor
D BDI_3962 putative anti-sigma factor K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D BDI_1757 arginase K01476 rocF; arginase [EC:3.5.3.1]
D BDI_2672 arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pdi02024]
D BDI_0591 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D BDI_0590 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D BDI_0821 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D BDI_0923 glutamate/gamma-aminobutyrate anti-porter K20265 gadC; glutamate:GABA antiporter
D BDI_0631 conserved hypothetical protein K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D BDI_0527 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_2754 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_0051 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_0615 long-chain-fatty-acid-CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_0060 glycoside hydrolase family 26, candidate beta-glycosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D BDI_3695 riboflavin biosynthesis protein ribD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D BDI_0971 multidrug efflux pump channel protein K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_0383 outer membrane protein oprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_0276 putative multidrug resistance protein K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_1491 outer membrane protein oprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_2953 putative hemolysin K11031 slo; thiol-activated cytolysin
D BDI_2954 putative hemolysin K11031 slo; thiol-activated cytolysin
D BDI_0520 membrane protein, putative K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BDI_3426 putative calcium dependent protease K14645 K14645; serine protease [EC:3.4.21.-]
D BDI_3608 protein-export membrane protein SecD/SecF K12257 secDF; SecD/SecF fusion protein
D BDI_2270 putative preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D BDI_0195 putative protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D BDI_2360 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D BDI_1859 conserved hypothetical protein with conserved domain K03210 yajC; preprotein translocase subunit YajC
D BDI_0484 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BDI_0941 recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BDI_0218 putative signal recognition protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D BDI_0107 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pdi02040]
D BDI_1513 glycoside hydrolase family 73 K02395 flgJ; peptidoglycan hydrolase FlgJ
D BDI_0107 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D BDI_0360 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D BDI_3169 RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D BDI_3395 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BDI_2351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pdi04980]
D BDI_3327 ATP:cob(I)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D BDI_1239 putative ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D BDI_3744 putative ArgK protein with ATPase and kinase domains K07588 MMAA; GTPase [EC:3.6.5.-]
D BDI_2303 methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D BDI_2302 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D BDI_0415 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pdi01501]
D BDI_2000 beta-lactamase induction signal transducer K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D BDI_0633 putative signal transducer K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D BDI_0833 conserved hypothetical protein K02172 blaR1; bla regulator protein blaR1
D BDI_3215 TonB K02172 blaR1; bla regulator protein blaR1
D BDI_0832 conserved hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D BDI_3214 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D BDI_1493 acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0274 multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0380 AcrA/AcrE family multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_3331 putative membrane fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0973 putative transport-related, exported protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_2908 multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0789 cation efflux system protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_3330 multidrug efflux membrane fusion protein K18138 acrB; multidrug efflux pump
D BDI_1492 putative aminoglycoside efflux pump K18138 acrB; multidrug efflux pump
D BDI_0971 multidrug efflux pump channel protein K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_0383 outer membrane protein oprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_0276 putative multidrug resistance protein K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_1491 outer membrane protein oprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_3352 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3572 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D BDI_0791 outer membrane protein, putative K12340 tolC; outer membrane protein
D BDI_0684 conserved hypothetical protein, putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_0346 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3329 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D BDI_1818 glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BDI_1881 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BDI_2492 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pdi01502]
D BDI_2675 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BDI_3384 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D BDI_3366 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BDI_2490 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BDI_2487 glycosyltransferase family 28, candidate undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pdi01503]
D BDI_0809 conserved hypothetical protein, putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BDI_3970 conserved hypothetical protein, putative N-acetylmuramoyl-L-alanine amidase amiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BDI_0758 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D BDI_0359 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D BDI_1493 acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0274 multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0380 AcrA/AcrE family multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_3331 putative membrane fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0973 putative transport-related, exported protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_2908 multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0789 cation efflux system protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_3330 multidrug efflux membrane fusion protein K18138 acrB; multidrug efflux pump
D BDI_1492 putative aminoglycoside efflux pump K18138 acrB; multidrug efflux pump
D BDI_3352 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3572 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D BDI_0791 outer membrane protein, putative K12340 tolC; outer membrane protein
D BDI_0684 conserved hypothetical protein, putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_0346 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3329 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D BDI_2106 acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pdi01000]
C 01001 Protein kinases [BR:pdi01001]
D BDI_2677 conserved hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D BDI_2156 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D BDI_1096 putative anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D BDI_3559 conserved hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D BDI_0018 capsular polysaccharide transport protein, putative K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_0125 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_3240 putative tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_2223 putative tyrosine-protein kinase ptk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_1595 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_1472 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_0426 putative EPS related membrane protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_1278 conserved hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D BDI_2479 two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BDI_0991 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BDI_3934 osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D BDI_3661 two-component system sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D BDI_0807 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D BDI_2438 two-component sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D BDI_2689 putative two-component system sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D BDI_0115 two-component system sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D BDI_3935 two-component system sensor histidine kinase, FrrD K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D BDI_3593 two-component system sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D BDI_3594 two-component system sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D BDI_3497 two-component system sensor histidine kinase/response regulator, hybrid K19694 chiS; two-component system, sensor histidine kinase ChiS
D BDI_1298 two-component system sensor histidine kinase, with a response regulator receiver domain K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D BDI_0765 two-component system sensor histidine kinase, with response regulator receiver domain K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D BDI_0509 two-component sensor histidine kinase with response regulator receiver domain K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pdi01009]
D BDI_2775 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D BDI_3741 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BDI_0681 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D BDI_1037 putative serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D BDI_1107 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pdi01002]
D BDI_0450 putative signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D BDI_1814 Ni,Fe-hydrogenase maturation factor K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D BDI_2287 putative aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D BDI_1828 putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BDI_1829 glutaminne-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BDI_0538 putative lipoprotein protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D BDI_0310 amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BDI_0578 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BDI_0326 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D BDI_0324 glutamine-hydrolyzing asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BDI_1549 putative ThiJ family intracellular protease K03152 thiJ; protein deglycase [EC:3.5.1.124]
D BDI_1363 putative ThiJ family intracellular protease K03152 thiJ; protein deglycase [EC:3.5.1.124]
D BDI_1550 putative choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D BDI_2911 putative secreted peptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D BDI_2398 putative metal-dependent membrane protease K07052 K07052; CAAX protease family protein
D BDI_0965 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D BDI_0207 peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D BDI_1602 peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D BDI_1601 peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D BDI_1563 putative endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D BDI_0132 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BDI_3818 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BDI_3074 putative zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D BDI_1327 putative peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D BDI_3548 glutamine amidotransferase, class II/dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D BDI_0311 tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D BDI_3879 conserved hypothetical protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D BDI_2582 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BDI_2092 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D BDI_2359 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D BDI_3150 putative methionine aminopeptidase A K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D BDI_2283 putative aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D BDI_1098 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D BDI_0222 putative aminopeptidase K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D BDI_1854 AAA-metalloprotease FtsH, with ATPase domain K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BDI_1822 peptidase K07387 K07387; metalloprotease [EC:3.4.24.-]
D BDI_3779 putative dipeptidyl-peptidase III K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4]
D BDI_0481 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D BDI_0833 conserved hypothetical protein K02172 blaR1; bla regulator protein blaR1
D BDI_3215 TonB K02172 blaR1; bla regulator protein blaR1
D BDI_0758 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D BDI_0359 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D BDI_2766 lysyl endopeptidase precursor K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50]
D BDI_2829 extracellular protease, putative K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50]
D BDI_3426 putative calcium dependent protease K14645 K14645; serine protease [EC:3.4.21.-]
D BDI_2246 dipeptidyl aminopeptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BDI_2193 dipeptidyl aminopeptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BDI_3094 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BDI_3713 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BDI_3358 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BDI_2396 ATP-dependent Clp protease, proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BDI_1874 ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D BDI_2848 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BDI_2849 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BDI_3439 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BDI_3349 carboxy-terminal processing protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D BDI_0205 carboxy-terminal processing protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D BDI_3657 carboxy-terminal processing protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D BDI_3153 conserved hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D BDI_2720 putative exported tricorn protease K08676 tri; tricorn protease [EC:3.4.21.-]
D BDI_1228 putative peptidase/protease family protein K08676 tri; tricorn protease [EC:3.4.21.-]
D BDI_2726 putative Tricorn-like protease K08676 tri; tricorn protease [EC:3.4.21.-]
D BDI_3943 protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D BDI_3603 rhomboid family protein K07059 K07059; rhomboid family protein
D BDI_3604 rhomboid family protein K07059 K07059; rhomboid family protein
D BDI_1755 asparaginase family protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D BDI_3191 collagenase precursor K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D BDI_1489 putative collagenase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D BDI_0918 putative modulator of DNA gyrase K03592 pmbA; PmbA protein
D BDI_0919 putative modulator of DNA gyrase K03568 tldD; TldD protein
D BDI_0934 putative outer membrane protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:pdi01003]
D BDI_1302 glycosyltransferase family 2, candidate dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D BDI_0209 glycosyltransferase family 4 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D BDI_0212 glycosyltransferase family 5 K00703 glgA; starch synthase [EC:2.4.1.21]
D BDI_0528 glycosyltransferase family 51, candidate monofunctional monofunctional peptidoglycan glycosyltransferase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D BDI_0932 glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D BDI_1818 glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BDI_0042 glycosyltransferase family 26 K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D BDI_3206 glycosyltransferase family 1, candidate beta-glycosyltransferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
D BDI_3927 glycosyltransferase family 20, candidate bifunctional trehalose-6-phosphate synthase/trehalose-6-phosphate phosphatase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pdi01005]
D BDI_2106 acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D BDI_2636 glycosyltransferase family 19, candidate lipid-alpha-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D BDI_2105 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D BDI_2104 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D BDI_2591 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D BDI_3942 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D BDI_0047 putative acetyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D BDI_2288 glycosyltransferase family 30 K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D BDI_0285 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D BDI_0522 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D BDI_2631 putative deoxyoctulonosic acid synthetase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D BDI_0168 putative hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D BDI_2900 putative sugar isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D BDI_1651 glycosyltransferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pdi01011]
D BDI_0477 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BDI_1148 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BDI_2486 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BDI_2489 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BDI_2491 probable UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BDI_3384 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D BDI_2675 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BDI_3702 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BDI_2490 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BDI_2487 glycosyltransferase family 28, candidate undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BDI_2407 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BDI_0953 putative membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BDI_1818 glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BDI_0932 glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D BDI_1881 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BDI_2492 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BDI_3358 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BDI_0528 glycosyltransferase family 51, candidate monofunctional monofunctional peptidoglycan glycosyltransferase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D BDI_0132 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BDI_3818 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BDI_0538 putative lipoprotein protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D BDI_2556 glycoside hydrolase family 23 K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D BDI_0819 glycoside hydrolase family 23 K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D BDI_1029 glycoside hydrolase family 23 K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D BDI_1395 glutamine ABC transporter glutamine-binding protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D BDI_1801 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D BDI_1049 putative lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D BDI_0809 conserved hypothetical protein, putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BDI_3970 conserved hypothetical protein, putative N-acetylmuramoyl-L-alanine amidase amiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pdi01004]
D BDI_1760 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BDI_3631 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BDI_2436 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BDI_0567 3-oxoacyl-[acyl-carrier-protein] synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BDI_1497 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BDI_2827 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BDI_0189 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_1496 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_0570 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BDI_2105 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D BDI_3383 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BDI_1603 putative dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D BDI_2255 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BDI_0527 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_2754 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_0051 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_0615 long-chain-fatty-acid-CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_2331 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:pdi01006]
D BDI_3736 putative isoprenoid biosynthesis related protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D BDI_2971 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D BDI_3698 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BDI_0286 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BDI_2111 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BDI_1553 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:pdi01007]
D BDI_2289 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BDI_1388 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BDI_3058 putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BDI_3452 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BDI_2837 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BDI_3601 putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BDI_2791 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BDI_0448 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BDI_3795 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BDI_3008 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BDI_0150 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BDI_1402 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BDI_3727 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BDI_3784 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BDI_3201 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BDI_0539 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BDI_0989 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BDI_0660 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BDI_2543 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BDI_0836 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BDI_1234 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BDI_3491 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_2026 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BDI_0321 aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D BDI_1378 putative aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D BDI_0968 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BDI_1237 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D BDI_2951 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D BDI_1915 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D BDI_1877 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D BDI_2080 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BDI_0982 putative aminotransferase B K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BDI_2673 acetylornithine aminotransferase, putative K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D BDI_0067 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D BDI_1914 adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D BDI_1775 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BDI_2851 serine-pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D BDI_0505 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BDI_2790 putative aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D BDI_0127 putative aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pdi00194]
D BDI_0270 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BDI_0271 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BDI_0263 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BDI_0264 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BDI_0265 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BDI_0266 ATP synthase B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BDI_0267 putative ATP synthase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BDI_0268 ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pdi03000]
D BDI_3001 site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BDI_0861 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BDI_0788 transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D BDI_0974 transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D BDI_0766 putative transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D BDI_0340 transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D BDI_0464 probable transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D BDI_2907 putative transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D BDI_2802 putative transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D BDI_2008 transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D BDI_1562 putative transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D BDI_2773 putative transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D BDI_1248 transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D BDI_1303 redox-sensitive transcriptional activator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D BDI_1820 putative transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D BDI_0378 transcriptional regulator, putative catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BDI_1557 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BDI_3728 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D BDI_2704 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D BDI_2551 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BDI_3908 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BDI_0685 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D BDI_3781 transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D BDI_0216 conserved hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D BDI_0284 transcriptional regulator K21556 malR; CRP/FNR family transcriptional regulator, polysaccharide utilization system transcription regulator
D BDI_3720 cAMP-binding domain-containing regulatory protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D BDI_0113 putative transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D BDI_1720 cAMP-binding domain transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D BDI_2755 conserved hypothetical protein K10947 K10947; PadR family transcriptional regulator
D BDI_0832 conserved hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D BDI_3214 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D BDI_2563 putative biotin-(acetyl-CoA carboxylase) synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D BDI_0882 conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D BDI_0906 putative plasmid maintenance system antidote protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D BDI_2578 putative DNA binding protein K01926 rex; redox-sensing transcriptional repressor
D BDI_2713 hypothetical protein K07729 K07729; putative transcriptional regulator
D BDI_0604 transcriptional regulator, putative nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D BDI_2558 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BDI_0071 arginine repressor, transcriptional regulator of arginine metabolism K03402 argR; transcriptional regulator of arginine metabolism
D BDI_0281 conserved hypothetical protein K03973 pspC; phage shock protein C
D BDI_1431 putative transcriptional regulator K07735 algH; putative transcriptional regulator
D BDI_0449 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:pdi03021]
D BDI_2354 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BDI_2264 DNA-directed RNA polymerase, beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BDI_2263 DNA-directed RNA polymerase, beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BDI_0360 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D BDI_0595 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D BDI_1928 putative RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D BDI_2614 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D BDI_2642 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D BDI_3124 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_3453 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_2477 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_2471 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_1305 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_3340 putative ECF-type RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_2336 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_3847 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_2856 putative ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_1686 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_1680 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_3961 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_3108 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_2325 RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_0239 putative RNA polymerase ECF-type sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D BDI_3169 RNA polymerase sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D BDI_3533 putative nitrogen utilization substance protein K02600 nusA; transcription termination/antitermination protein NusA
D BDI_1858 putative N utilization substance protein K03625 nusB; transcription antitermination protein NusB
D BDI_2269 transcription anti-termination protein K02601 nusG; transcription termination/antitermination protein NusG
D BDI_0421 putative transcriptional regulator UpxY-like protein K02601 nusG; transcription termination/antitermination protein NusG
D BDI_1096 putative anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D BDI_3596 two-componnent system response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D BDI_3560 putative anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D BDI_3559 conserved hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D BDI_0449 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D BDI_2758 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D BDI_1398 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pdi03019]
D BDI_1996 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D BDI_2828 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BDI_1891 HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D BDI_3344 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D BDI_1161 ATP-dependent RNA helicase DeaD K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D BDI_1397 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D BDI_2906 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BDI_1747 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BDI_1162 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BDI_2394 ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BDI_3395 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BDI_2351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BDI_2760 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BDI_1398 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BDI_3741 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BDI_1997 chaperone DnaK protein K04043 dnaK; molecular chaperone DnaK
D BDI_3787 chaperonin GroEL, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BDI_2189 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D BDI_2053 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:pdi03011]
D BDI_2619 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BDI_3489 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BDI_2374 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BDI_2355 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BDI_2363 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BDI_3967 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BDI_2383 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BDI_2366 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BDI_3488 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BDI_2381 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BDI_2356 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BDI_2384 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BDI_2357 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BDI_2367 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BDI_2770 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BDI_1709 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BDI_2371 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BDI_3968 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BDI_2376 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BDI_3552 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BDI_2279 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BDI_2267 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BDI_2377 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BDI_2380 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BDI_2379 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BDI_2368 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BDI_2365 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BDI_3969 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BDI_2266 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BDI_2268 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BDI_2265 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BDI_3487 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BDI_2370 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BDI_2361 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BDI_2373 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BDI_2353 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BDI_2364 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BDI_2341 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BDI_0663 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BDI_0308 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BDI_2375 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BDI_2378 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BDI_2369 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BDI_0309 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BDI_0692 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BDI_2372 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BDI_2362 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BDI_1945 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BDI_0693 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BDI_0662 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BDI_0333 putative 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D BDI_0137 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_0367 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_1789 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_2734 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_3953 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_2857 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_2439 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_2738 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_2861 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_3948 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_0133 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_2443 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_0363 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_1793 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_2858 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_1790 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_2440 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_0366 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_3951 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_2735 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_0136 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pdi03009]
D BDI_2828 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BDI_1132 putative helicase K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
D BDI_2435 GTP-binding protein Era K03595 era; GTPase
D BDI_1897 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D BDI_0449 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D BDI_3533 putative nitrogen utilization substance protein K02600 nusA; transcription termination/antitermination protein NusA
D BDI_1858 putative N utilization substance protein K03625 nusB; transcription antitermination protein NusB
D BDI_2269 transcription anti-termination protein K02601 nusG; transcription termination/antitermination protein NusG
D BDI_0421 putative transcriptional regulator UpxY-like protein K02601 nusG; transcription termination/antitermination protein NusG
D BDI_2584 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BDI_2501 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BDI_1826 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BDI_0469 glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BDI_2494 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BDI_2185 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BDI_2506 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BDI_0708 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BDI_2084 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D BDI_0392 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D BDI_3093 putative N6-adenine-specific DNA methylase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D BDI_0185 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BDI_1030 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D BDI_2180 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BDI_3726 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D BDI_1495 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BDI_3794 RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BDI_2676 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BDI_0478 putative 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D BDI_0942 putative Fe-S oxidoreductase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D BDI_0289 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D BDI_1996 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D BDI_0655 putative endonuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D BDI_2906 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BDI_3377 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D BDI_2434 GTP-binding protein, Era/ThdF family K03977 engA; GTPase
D BDI_3288 GTP-binding protein HflX K03665 hflX; GTPase
D BDI_1745 conserved hypothetical protein, putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BDI_2052 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BDI_2550 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BDI_3304 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D BDI_3532 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D BDI_1853 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D BDI_2277 sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D BDI_2987 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D BDI_2437 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pdi03016]
D BDI_2651 conserved hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D BDI_2289 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BDI_0989 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BDI_0448 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BDI_3008 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BDI_2791 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BDI_1388 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BDI_3601 putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BDI_0150 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BDI_1402 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BDI_2543 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BDI_3727 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BDI_3201 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BDI_0660 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BDI_0539 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BDI_2837 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BDI_3795 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BDI_3784 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BDI_0836 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BDI_1234 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BDI_3058 putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BDI_3452 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BDI_2968 putative D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D BDI_2757 histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BDI_3651 putative methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D BDI_1936 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D BDI_2406 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D BDI_3778 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D BDI_1745 conserved hypothetical protein, putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BDI_0286 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BDI_2111 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BDI_2122 putative GTPase, ThdF family K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D BDI_2965 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BDI_0792 sulfite synthesis pathway protein CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D BDI_3055 putative ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D BDI_1269 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D BDI_1373 putative transcriptional regulator K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D BDI_2567 putative cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D BDI_3188 putative TIM-barrel enzyme K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D BDI_2415 conserved hypothetical protein, putative tRNA-i(6)A37 modification enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D BDI_0048 putative Fe-S oxidoreductase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D BDI_1235 tRNA Guanine-N(1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D BDI_1875 conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D BDI_0452 putative tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D BDI_2180 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BDI_2113 conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D BDI_3759 putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D BDI_2405 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D BDI_3912 putative aluminum resistance protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D BDI_1299 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D BDI_1300 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D BDI_3913 conserved hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D BDI_3079 putative iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D BDI_0774 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D BDI_1399 putative cell-cycle protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D BDI_0158 conserved hypothetical protein, putative glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D BDI_0532 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D BDI_3343 putative ATPase/GTPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D BDI_2881 ThiF family protein, putative dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D BDI_3344 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D BDI_2760 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BDI_3643 putative DNA binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:pdi03012]
D BDI_2572 putative translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1
D BDI_3534 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BDI_0661 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BDI_0235 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D BDI_1708 putative ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D BDI_1132 putative helicase K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
D BDI_3490 elongation factor Ts K02357 tsf; elongation factor Ts
D BDI_2272 translation elongation factor Tu K02358 tuf; elongation factor Tu
D BDI_3765 translation elongation factor G K02355 fusA; elongation factor G
D BDI_2382 elongation factor EF-G K02355 fusA; elongation factor G
D BDI_2102 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D BDI_3376 ribosome recycling factor K02838 frr; ribosome recycling factor
D BDI_3694 putative protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D BDI_0332 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D BDI_2358 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D BDI_2588 elongation factor P K02356 efp; elongation factor P
D BDI_2753 peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
D BDI_2510 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:pdi03110]
D BDI_1223 endopeptidase Clp ATP-binding chain B K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D BDI_1089 negative regulator of genetic competence K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D BDI_2395 ATP-dependent Clp protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D BDI_0681 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D BDI_1997 chaperone DnaK protein K04043 dnaK; molecular chaperone DnaK
D BDI_3787 chaperonin GroEL, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BDI_1240 putative chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D BDI_0353 putative chaperone DnAJ K05516 cbpA; curved DNA-binding protein
D BDI_3412 DnaJ-domain-containing protein K05801 djlA; DnaJ like chaperone protein
D BDI_1241 molecular chaperon GrpE protein K03687 GRPE; molecular chaperone GrpE
D BDI_0101 small heat shock protein K13993 HSP20; HSP20 family protein
D BDI_0331 putative heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D BDI_3786 chaperonin GroES, 10 kDa K04078 groES; chaperonin GroES
D BDI_3680 conserved hypothetical protein, putative chaperonin K04078 groES; chaperonin GroES
D BDI_0758 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D BDI_0359 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D BDI_1854 AAA-metalloprotease FtsH, with ATPase domain K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BDI_0268 ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BDI_2464 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D BDI_1806 hydrogenase expression/formation protein HupA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D BDI_1805 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D BDI_3426 putative calcium dependent protease K14645 K14645; serine protease [EC:3.4.21.-]
D BDI_0665 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_2521 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_1272 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_0050 glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D BDI_1751 cyclophilin-type peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D BDI_0184 peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D BDI_2245 putative peptidyl-prolyl cis-trans isomerase, FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D BDI_2705 FKBP-type peptidyl-prolyl cis-trans isomerase, outer membrane protein precursor K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D BDI_2706 peptidyl-prolyl cis-trans isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D BDI_2081 peptidyl-prolyl cis-trans isomerase SlyD, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D BDI_2390 peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D BDI_2392 parvulin-like peptidyl-prolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D BDI_3483 thioredoxin K03671 TXN; thioredoxin
D BDI_0455 thiol-disulfide isomerase and thioredoxin K03671 TXN; thioredoxin
D BDI_0680 putative thioredoxin K03671 TXN; thioredoxin
D BDI_1924 thioredoxin K03671 TXN; thioredoxin
D BDI_1711 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:pdi04131]
D BDI_1575 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BDI_0244 glycoside hydrolase family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D BDI_1250 hexokinase type III K00844 HK; hexokinase [EC:2.7.1.1]
D BDI_0287 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BDI_0596 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BDI_3302 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BDI_0681 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:pdi04121]
C 03051 Proteasome [BR:pdi03051]
D BDI_0681 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pdi03032]
D BDI_2814 ribonuclease H-related protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BDI_3001 site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BDI_0861 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BDI_1995 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BDI_3602 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BDI_2623 putative histone-like protein K03530 hupB; DNA-binding protein HU-beta
D BDI_3525 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BDI_1150 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BDI_0943 putative DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BDI_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BDI_0669 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BDI_1289 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BDI_1848 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BDI_1290 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BDI_0868 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_1993 single-stranded binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_3484 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BDI_0694 DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BDI_1115 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BDI_1778 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BDI_2719 putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_0810 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_0695 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_2088 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BDI_3545 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BDI_2972 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BDI_0799 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BDI_0862 methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D BDI_1090 DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BDI_3550 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BDI_3197 topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D BDI_3347 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D BDI_3599 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D BDI_1687 putative DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pdi03036]
D BDI_3001 site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BDI_0861 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BDI_2828 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BDI_1995 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BDI_3602 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BDI_2623 putative histone-like protein K03530 hupB; DNA-binding protein HU-beta
D BDI_3525 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BDI_1150 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BDI_0943 putative DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BDI_0353 putative chaperone DnAJ K05516 cbpA; curved DNA-binding protein
D BDI_0354 conserved hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D BDI_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BDI_0618 non-specific DNA-binding protein Dps K04047 dps; starvation-inducible DNA-binding protein
D BDI_0620 non-specific DNA-binding protein Dps K04047 dps; starvation-inducible DNA-binding protein
D BDI_2551 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BDI_3908 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BDI_2484 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D BDI_2020 putative ATP-binding protein involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D BDI_2492 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BDI_0399 FtsK/SpoIIIE family cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D BDI_2485 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D BDI_2488 rod shape-determining protein rodA K03588 ftsW; cell division protein FtsW
D BDI_2409 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D BDI_2483 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BDI_0809 conserved hypothetical protein, putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BDI_3970 conserved hypothetical protein, putative N-acetylmuramoyl-L-alanine amidase amiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BDI_1493 acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0274 multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0380 AcrA/AcrE family multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_3331 putative membrane fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0973 putative transport-related, exported protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_2908 multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0789 cation efflux system protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_1884 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D BDI_1883 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D BDI_1880 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D BDI_0731 chromosome-partitioning ATPase K03496 parA; chromosome partitioning protein
D BDI_2559 ATPase, ParA family K03496 parA; chromosome partitioning protein
D BDI_2558 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BDI_3197 topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D BDI_3347 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D BDI_2965 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BDI_0469 glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BDI_2278 tyrosine type site-specific recombinase K03733 xerC; integrase/recombinase XerC
D BDI_3300 tyrosine type site-specific recombinase K04763 xerD; integrase/recombinase XerD
D BDI_3609 integrase K04763 xerD; integrase/recombinase XerD
D BDI_1359 integrase K04763 xerD; integrase/recombinase XerD
D BDI_0420 integrase K04763 xerD; integrase/recombinase XerD
D BDI_0119 integrase / site-specific recombinase K04763 xerD; integrase/recombinase XerD
D BDI_0296 integrase K04763 xerD; integrase/recombinase XerD
D BDI_0546 integrase / site-specific recombinase K04763 xerD; integrase/recombinase XerD
D BDI_1421 integrase K04763 xerD; integrase/recombinase XerD
D BDI_1600 integrase K04763 xerD; integrase/recombinase XerD
D BDI_3811 integrase K04763 xerD; integrase/recombinase XerD
D BDI_3650 Mrp/Nbp35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D BDI_1441 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pdi03400]
D BDI_0256 methylated DNA-protein cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D BDI_3716 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BDI_2034 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BDI_1994 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D BDI_1143 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BDI_0781 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D BDI_1667 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D BDI_3174 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BDI_1724 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D BDI_2011 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D BDI_1111 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BDI_1871 conserved hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BDI_1200 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D BDI_1746 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BDI_0799 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BDI_2972 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BDI_0925 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D BDI_3283 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D BDI_0282 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D BDI_2967 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D BDI_0939 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BDI_2264 DNA-directed RNA polymerase, beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BDI_2263 DNA-directed RNA polymerase, beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BDI_2354 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BDI_0616 putative transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BDI_2998 putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D BDI_1243 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D BDI_2387 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D BDI_2702 putative exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D BDI_2701 conserved hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D BDI_3484 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BDI_0694 DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BDI_1115 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BDI_1778 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BDI_2719 putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_0810 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_0695 DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BDI_2088 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BDI_0868 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_1993 single-stranded binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_0862 methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D BDI_2024 putative very-short-patch-repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D BDI_1452 RecA K03553 recA; recombination protein RecA
D BDI_2660 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D BDI_2917 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BDI_3803 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BDI_2298 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D BDI_1729 ATP-dependent exonuclease sbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D BDI_1730 putative exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D BDI_1754 putative DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D BDI_0202 putative DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D BDI_2699 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BDI_2779 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BDI_3555 conserved hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D BDI_1434 recombination protein RecR K06187 recR; recombination protein RecR
D BDI_0699 DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N)
D BDI_1183 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D BDI_0858 conserved hypothetical protein K19789 radD; DNA repair protein RadD
D BDI_1090 DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BDI_3550 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BDI_3599 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D BDI_1995 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BDI_3602 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BDI_2623 putative histone-like protein K03530 hupB; DNA-binding protein HU-beta
D BDI_3525 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BDI_1150 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BDI_0943 putative DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BDI_1747 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BDI_1162 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BDI_2394 ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BDI_1571 DNA damage-inducible protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D BDI_3017 conserved hypothetical protein K14623 dinD; DNA-damage-inducible protein D
D BDI_3693 putative regulatory protein K03565 recX; regulatory protein
D BDI_0002 putative ribonucleoside reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BDI_1693 conserved hypothetical protein, putative exopolyphosphatase-related protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:pdi03029]
D BDI_3534 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BDI_0661 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BDI_3490 elongation factor Ts K02357 tsf; elongation factor Ts
D BDI_2272 translation elongation factor Tu K02358 tuf; elongation factor Tu
D BDI_3765 translation elongation factor G K02355 fusA; elongation factor G
D BDI_2382 elongation factor EF-G K02355 fusA; elongation factor G
D BDI_2435 GTP-binding protein Era K03595 era; GTPase
D BDI_3058 putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BDI_3008 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BDI_1402 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BDI_3201 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BDI_3601 putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BDI_1312 putative endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D BDI_0868 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_1993 single-stranded binding protein K03111 ssb; single-strand DNA-binding protein
D BDI_3699 putative outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D BDI_1997 chaperone DnaK protein K04043 dnaK; molecular chaperone DnaK
D BDI_1241 molecular chaperon GrpE protein K03687 GRPE; molecular chaperone GrpE
D BDI_3787 chaperonin GroEL, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BDI_3786 chaperonin GroES, 10 kDa K04078 groES; chaperonin GroES
D BDI_3680 conserved hypothetical protein, putative chaperonin K04078 groES; chaperonin GroES
D BDI_1240 putative chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D BDI_3650 Mrp/Nbp35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D BDI_0520 membrane protein, putative K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BDI_0681 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pdi02000]
D BDI_2424 ABC transporter, ATP-binding protein, MsbA family K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D BDI_3167 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D BDI_2935 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D BDI_3664 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D BDI_2033 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D BDI_0492 putative molybdenum transport ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein
D BDI_1645 spermidine/putrescine ABC transporter K11069 potD; spermidine/putrescine transport system substrate-binding protein
D BDI_1646 putrescine transport system permease protein PotI K11070 potC; spermidine/putrescine transport system permease protein
D BDI_1647 putrescine transport system permease protein PotH K11071 potB; spermidine/putrescine transport system permease protein
D BDI_1648 spermidine/putrescine transport ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D BDI_0098 glycine betaine-binding protein precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D BDI_3857 glycine betaine-binding protein precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D BDI_0097 glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D BDI_3858 glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D BDI_0096 glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D BDI_3859 glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D BDI_1369 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D BDI_3971 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D BDI_2401 conserved hypothetical protein, putative ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D BDI_2402 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D BDI_2592 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D BDI_2418 putative ABC transporter permease protein K02037 pstC; phosphate transport system permease protein
D BDI_2419 putative ABC transporter permease protein K02038 pstA; phosphate transport system permease protein
D BDI_2420 putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BDI_3419 iron(III) ABC transporter periplasmic iron-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D BDI_1017 putative exported periplasmic protein K25034 btuF; cobalamin transport system substrate-binding protein
D BDI_3674 iron(III) ABC transporter putative permease protein K25027 btuC; cobalamin transport system permease protein
D BDI_1018 iron(III) ABC transporter putative permease protein K25027 btuC; cobalamin transport system permease protein
D BDI_1019 iron(III) ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D BDI_3675 iron(III) ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D BDI_3081 putative zinc ABC transporter zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D BDI_3148 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D BDI_3082 putative metal ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D BDI_3493 conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D BDI_0773 conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D BDI_2399 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D BDI_1332 putative ABC transport system, membrane protein K25180 ybhR; drug efflux transport system permease protein
D BDI_1333 putative ABC transporter permease protein K25181 ybhS; drug efflux transport system permease protein
D BDI_1335 putative ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D BDI_1336 putative membrane protein K25183 ybhG; membrane fusion protein YbhG
D BDI_2025 putative transmembrane permease K09808 lolC_E; lipoprotein-releasing system permease protein
D BDI_3305 conserved hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D BDI_2882 lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BDI_2409 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D BDI_2020 putative ATP-binding protein involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D BDI_1850 ABC transporter, permease protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D BDI_1532 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D BDI_1533 conserved hypothetical protein, putative transmembrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D BDI_0142 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D BDI_0143 putative transport-related membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D BDI_1849 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BDI_1101 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BDI_0348 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1634 putative FtsX-related transmembrane transport protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_0785 putative ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1956 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1957 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1960 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1970 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_0349 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1636 putative ABC transport system, membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_3355 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_3574 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_3576 ABC transporter, putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1438 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1958 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_3475 putative ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1962 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1965 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1966 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1969 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1955 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1959 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1633 putative transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1635 putative ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_1661 putative FtsX-related transmembrane transport protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BDI_3354 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BDI_1964 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BDI_3577 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BDI_1637 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BDI_3537 ABC transporter, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D BDI_3769 conserved hypothetical protein K26939 norM; MATE family, multidrug efflux pump
D BDI_1383 putative transport protein, multidrug efflux protein K26939 norM; MATE family, multidrug efflux pump
D BDI_1779 multidrug efflux pump BexA K26937 dinF; MATE family, multidrug efflux pump
D BDI_3705 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D BDI_0460 putative DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D BDI_0356 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D BDI_1177 putative Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D BDI_2182 conserved hypothetical protein, putative membrane protein K26937 dinF; MATE family, multidrug efflux pump
D BDI_1381 putative transmembrane cation efflux pump K26937 dinF; MATE family, multidrug efflux pump
D BDI_0215 putative antiporter membrane protein K26937 dinF; MATE family, multidrug efflux pump
D BDI_3924 BexA, putative cation effux pump K26937 dinF; MATE family, multidrug efflux pump
D BDI_3037 cation efflux pump K26937 dinF; MATE family, multidrug efflux pump
D BDI_3676 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D BDI_1716 putative transmembrane cation efflux protein K26937 dinF; MATE family, multidrug efflux pump
D BDI_0784 xylose-proton symporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D BDI_0104 fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D BDI_1665 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D BDI_1626 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D BDI_2943 major facilitator family transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D BDI_2000 beta-lactamase induction signal transducer K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D BDI_0633 putative signal transducer K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D BDI_2973 putative transmembrane efflux protein K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein
D BDI_1384 putative transport protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D BDI_1941 putative transport protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D BDI_0459 putative macrolide efflux pump K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D BDI_1536 putative fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D BDI_1815 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D BDI_0949 conserved hypothetical protein BatB K07114 yfbK; Ca-activated chloride channel homolog
D BDI_0948 conserved hypothetical protein BatA K07114 yfbK; Ca-activated chloride channel homolog
D BDI_0117 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D BDI_2057 putative transport protein K03442 mscS; small conductance mechanosensitive channel
D BDI_0961 putative membrane transport protein K16053 ybdG; miniconductance mechanosensitive channel
D BDI_2585 magnesium transporter K06213 mgtE; magnesium transporter
D BDI_0107 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D BDI_1546 putative biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D BDI_3733 MotA/TolQ/ExbB proton channel family protein, putative biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D BDI_1547 putative tansport related protein K03559 exbD; biopolymer transport protein ExbD
D BDI_1244 Mg2+/Co2+ transport protein K03284 corA; magnesium transporter
D BDI_0667 Mg2+/Co2+ transporter K03284 corA; magnesium transporter
D BDI_0835 conserved hypothetical protein K06199 crcB; fluoride exporter
D BDI_0406 putative heavy-metal binding protein K08364 merP; periplasmic mercuric ion binding protein
D BDI_0837 putative hemolysins K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BDI_1992 hemolysin-related protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BDI_0183 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BDI_1197 hypothetical protein K16079 omp31; outer membrane immunogenic protein
D BDI_0996 outer membrane protein, putative OmpA domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D BDI_0653 outer membrane protein OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family
D BDI_2006 putative outer membrane protein precursor K06076 fadL; long-chain fatty acid transport protein
D BDI_2690 conserved hypothetical protein K16092 btuB; vitamin B12 transporter
D BDI_3708 vitamin B12 receptor precursor K16092 btuB; vitamin B12 transporter
D BDI_1558 outer membrane protein probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_0087 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_2334 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_2475 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_2745 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_3390 putative outer membrane protein probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_2519 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_2523 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_2549 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_2412 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_3297 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_3338 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_1907 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_1621 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_1624 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_1677 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_3963 putative outer membrane protein, probably involved in nutrient binding K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D BDI_3408 putative iron transport-related exported protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D BDI_3411 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D BDI_3399 TonB-dependent outer membrane receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D BDI_1443 TonB-dependent outer membrane receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D BDI_0405 putative TonB-dependent outer membrane receptor protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D BDI_3531 putative TonB-dependent transmembrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D BDI_3840 putative TonB-dependent outer membrane protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D BDI_1051 cation efflux system protein CzcC K15725 czcC; outer membrane protein, heavy metal efflux system
D BDI_0226 outer membrane efflux protein precursor K15725 czcC; outer membrane protein, heavy metal efflux system
D BDI_3352 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3572 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D BDI_0791 outer membrane protein, putative K12340 tolC; outer membrane protein
D BDI_0684 conserved hypothetical protein, putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_0346 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3329 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D BDI_0971 multidrug efflux pump channel protein K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_0383 outer membrane protein oprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_0276 putative multidrug resistance protein K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_1491 outer membrane protein oprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_1736 outer membrane efflux protein oprM precursor K18904 nodT; outer membrane protein, multidrug efflux system
D BDI_0017 polysaccharide export protein, BexD/CtrA/VexA family K01991 wza; polysaccharide biosynthesis/export protein
D BDI_1473 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D BDI_3241 polysaccharide export protein, BexD/CtrA/VexA family K01991 wza; polysaccharide biosynthesis/export protein
D BDI_0425 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D BDI_0124 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D BDI_2224 polysaccharide export protein, BexD/CtrA/VexA family K01991 wza; polysaccharide biosynthesis/export protein
D BDI_1596 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D BDI_3699 putative outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D BDI_1192 conserved hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D BDI_3472 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D BDI_2723 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D BDI_3313 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D BDI_2055 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D BDI_2586 conserved hypothetical protein K06518 cidA; holin-like protein
D BDI_1556 putative transport protein K16211 malY; maltose/moltooligosaccharide transporter
D BDI_0923 glutamate/gamma-aminobutyrate anti-porter K20265 gadC; glutamate:GABA antiporter
D BDI_1053 cation efflux system protein CzcA K15726 czcA; heavy metal efflux system protein
D BDI_0225 cation efflux system protein K15726 czcA; heavy metal efflux system protein
D BDI_0802 putative transport-related, membrane protein K15726 czcA; heavy metal efflux system protein
D BDI_1784 putative copper/silver resistance-related transport membrane protein K07787 cusA; copper/silver efflux system protein
D BDI_3330 multidrug efflux membrane fusion protein K18138 acrB; multidrug efflux pump
D BDI_1492 putative aminoglycoside efflux pump K18138 acrB; multidrug efflux pump
D BDI_2083 putative multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D BDI_1935 putative permease K08978 TC.BAT1; bacterial/archaeal transporter family protein
D BDI_1654 putative integral membrane protein K05340 glcU; glucose uptake protein
D BDI_1321 L-rhamnose/H+ symporter K02856 rhaT; L-rhamnose-H+ transport protein
D BDI_1331 H+/gluconate symporter and related permease K06155 gntT; Gnt-I system high-affinity gluconate transporter
D BDI_1977 anaerobic C4-dicarboxylate transporter DcuB K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D BDI_2547 putative Na+/Ca2+ exchanger protein K07301 yrbG; cation:H+ antiporter
D BDI_1632 conserved hypothetical protein K03312 gltS; glutamate:Na+ symporter, ESS family
D BDI_0928 Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D BDI_2717 Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D BDI_2716 Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D BDI_3333 putative Na+/H+ exchanger K11105 cvrA; potassium/hydrogen antiporter
D BDI_3925 NhaP-type Na+/H+ and K+/H+ antiporter K03316 nhaP; Na+:H+ antiporter
D BDI_3361 putative sodium/proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D BDI_0523 putative Na+/H+ antiporter K26735 KEA4_5_6; K+:H+ antiporter
D BDI_0927 putative Na+/H+ exchange protein K26730 napA; Na+:H+ antiporter
D BDI_1699 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D BDI_1727 cation/H+ antiporter K26731 CHX; K+:H+ antiporter
D BDI_2662 potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D BDI_0780 K+ uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D BDI_2663 Trk system K+ uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D BDI_0779 putative K+ uptake system protein K03499 trkA; trk/ktr system potassium uptake protein
D BDI_1503 putative purine permease K16345 xanP; xanthine permease XanP
D BDI_1743 putative chloride channel protein K03281 clcA; chloride channel protein, CIC family
D BDI_1781 putative transporter periplasmic binding protein K03281 clcA; chloride channel protein, CIC family
D BDI_3350 chromate transport protein K07240 chrA; chromate transporter
D BDI_3351 chromate transport protein K07240 chrA; chromate transporter
D BDI_3856 putative sulfate transporter permease K03321 TC.SULP; sulfate permease, SulP family
D BDI_3031 putative sulfate transporter permease K03321 TC.SULP; sulfate permease, SulP family
D BDI_1387 Mn2+ and Fe2+ transport protein K03322 mntH; manganese transport protein
D BDI_3154 putative Na+-dependent phosphate transporter K03324 yjbB; phosphate:Na+ symporter
D BDI_1643 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter
D BDI_0769 conserved hypothetical protein, putative membrane protein K05595 marC; multiple antibiotic resistance protein
D BDI_0008 MarC family integral membrane protein K05595 marC; multiple antibiotic resistance protein
D BDI_2488 rod shape-determining protein rodA K03588 ftsW; cell division protein FtsW
D BDI_3737 outer membrane protein TonB K03832 tonB; periplasmic protein TonB
D BDI_3213 outer membrane protein TonB K03832 tonB; periplasmic protein TonB
D BDI_3758 outer membrane protein OmpA family protein K03640 pal; peptidoglycan-associated lipoprotein
D BDI_2988 periplasmic component of the Tol biopolymer transport system K03641 tolB; TolB protein
D BDI_3772 pyrophosphate-energized vacuolar membrane proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D BDI_2684 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BDI_0160 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D BDI_1670 carboxylase, putative K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D BDI_2682 putative oxaloacetate decarboxylase gamma chain 1 K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D BDI_0163 methylmalonyl-CoA decarboxylase, alpha subunit K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D BDI_0657 acetyl-CoA carboxylase, carboxyltransferase component K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D BDI_0161 biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D BDI_3508 putative cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D BDI_0683 putative multidrug resistance protein K03543 emrA; membrane fusion protein, multidrug efflux system
D BDI_0224 cation efflux system protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D BDI_1052 cation efflux system protein CzcB K15727 czcB; membrane fusion protein, heavy metal efflux system
D BDI_0803 cation efflux system protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D BDI_1786 putative metal transport-related, exported protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D BDI_1311 periplasmic linker protein, putative multidrug resistance protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D BDI_1493 acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0274 multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0380 AcrA/AcrE family multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_3331 putative membrane fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0973 putative transport-related, exported protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_2908 multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0789 cation efflux system protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_1278 conserved hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D BDI_0018 capsular polysaccharide transport protein, putative K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_0125 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_3240 putative tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_2223 putative tyrosine-protein kinase ptk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_1595 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_1472 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_0426 putative EPS related membrane protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D BDI_3570 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_0242 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2945 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_1157 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2322 conserved hypothetical protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3284 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3678 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_0279 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_0417 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_1516 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_1622 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_1623 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_1683 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_1908 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2315 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2468 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2744 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3117 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3127 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3134 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3673 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3964 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2077 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2874 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2518 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2474 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2548 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3063 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2413 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3298 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_0233 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_1676 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3918 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_1921 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3182 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2333 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_0493 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3337 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3583 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3036 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3586 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_0391 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_0086 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_1559 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3388 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3465 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_2524 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3111 putative outer membrane protein, probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D BDI_3530 putative membrane transporter involved in nicotinamide mononucleotide transport K03811 pnuC; nicotinamide mononucleotide transporter
D BDI_1461 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D BDI_0081 conserved hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D BDI_1110 Mg2+ transport protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D BDI_3854 conserved hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:pdi02044]
D BDI_3352 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3572 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D BDI_0791 outer membrane protein, putative K12340 tolC; outer membrane protein
D BDI_0684 conserved hypothetical protein, putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_0346 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3329 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D BDI_2891 conserved hypothetical protein K02237 comEA; competence protein ComEA
D BDI_0206 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D BDI_1694 competence protein K02238 comEC; competence protein ComEC
D BDI_0484 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BDI_3608 protein-export membrane protein SecD/SecF K12257 secDF; SecD/SecF fusion protein
D BDI_2270 putative preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D BDI_0195 putative protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D BDI_2360 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D BDI_0218 putative signal recognition protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BDI_0941 recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BDI_1859 conserved hypothetical protein with conserved domain K03210 yajC; preprotein translocase subunit YajC
D BDI_0520 membrane protein, putative K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BDI_1759 putative Sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D BDI_1758 putative Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pdi02042]
D BDI_2953 putative hemolysin K11031 slo; thiol-activated cytolysin
D BDI_2954 putative hemolysin K11031 slo; thiol-activated cytolysin
D BDI_0837 putative hemolysins K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BDI_1992 hemolysin-related protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BDI_0183 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BDI_0917 hemolysin III K11068 hlyIII; hemolysin III
D BDI_1142 glycoside hydrolase family 84 K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 02022 Two-component system [BR:pdi02022]
D BDI_2479 two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BDI_0991 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BDI_3934 osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D BDI_3661 two-component system sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D BDI_0763 two-component system response regulator K07672 trcR; two-component system, OmpR family, response regulator TrcR
D BDI_2821 two-component system response regulator K07672 trcR; two-component system, OmpR family, response regulator TrcR
D BDI_0807 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D BDI_2438 two-component sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D BDI_2689 putative two-component system sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D BDI_0805 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D BDI_2345 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D BDI_2554 putative two-component response regulator K02477 K02477; two-component system, LytTR family, response regulator
D BDI_0537 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D BDI_2328 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D BDI_3357 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D BDI_0639 rteB, two-component system response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D BDI_0115 two-component system sensor histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D BDI_3935 two-component system sensor histidine kinase, FrrD K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D BDI_3593 two-component system sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D BDI_3594 two-component system sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D BDI_0114 two-component system response regulator K02481 flgR; two-component system, NtrC family, response regulator
D BDI_1949 two-component system response regulator K02481 flgR; two-component system, NtrC family, response regulator
D BDI_3497 two-component system sensor histidine kinase/response regulator, hybrid K19694 chiS; two-component system, sensor histidine kinase ChiS
D BDI_1298 two-component system sensor histidine kinase, with a response regulator receiver domain K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D BDI_0765 two-component system sensor histidine kinase, with response regulator receiver domain K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D BDI_0509 two-component sensor histidine kinase with response regulator receiver domain K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:pdi02035]
D BDI_1513 glycoside hydrolase family 73 K02395 flgJ; peptidoglycan hydrolase FlgJ
D BDI_0107 putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pdi04812]
D BDI_1884 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D BDI_2483 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BDI_2484 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D BDI_0731 chromosome-partitioning ATPase K03496 parA; chromosome partitioning protein
D BDI_2559 ATPase, ParA family K03496 parA; chromosome partitioning protein
D BDI_2558 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pdi04147]
D BDI_0681 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D BDI_3395 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BDI_2351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BDI_0287 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BDI_0672 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BDI_3302 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BDI_1327 putative peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D BDI_3548 glutamine amidotransferase, class II/dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D BDI_0094 thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D BDI_3787 chaperonin GroEL, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BDI_1997 chaperone DnaK protein K04043 dnaK; molecular chaperone DnaK
D BDI_0148 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BDI_2246 dipeptidyl aminopeptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BDI_2193 dipeptidyl aminopeptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BDI_3094 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BDI_3713 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BDI_2661 gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D BDI_0090 putative inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BDI_2393 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BDI_2272 translation elongation factor Tu K02358 tuf; elongation factor Tu
D BDI_2757 histidine triad (HIT) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BDI_0527 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_2754 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_0051 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_0615 long-chain-fatty-acid-CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BDI_2775 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D BDI_1898 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D BDI_3689 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D BDI_0069 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D BDI_2739 glycoside hydrolase family 29 K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D BDI_1666 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D BDI_1726 glycoside hydrolase family 13, candidate 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D BDI_1816 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D BDI_0320 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3771 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_3923 glutamine synthetase I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BDI_0912 alkaline phosphatase, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BDI_3180 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BDI_0506 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D BDI_1885 phosphoribosylaminoimidazole carboxy formyl formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0690 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BDI_0462 electron transfer flavoprotein alpha-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D BDI_0647 putative glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BDI_2695 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BDI_0596 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BDI_0118 putative sugar nucleotide epimerase K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:pdi02048]
D BDI_1183 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D BDI_1184 uncharacterized protein predicted to be involved in DNA repair K09951 cas2; CRISPR-associated protein Cas2
D BDI_1178 putative helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D BDI_1182 exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D BDI_1180 conserved hypothetical protein K19117 csd1; CRISPR-associated protein Csd1
D BDI_1181 uncharacterized protein predicted to be involved in DNA repair K19118 csd2; CRISPR-associated protein Csd2
D BDI_1179 conserved hypothetical protein K19119 cas5d; CRISPR-associated protein Cas5d
D BDI_3877 type I restriction enzyme, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D BDI_3253 Type II restriction enzyme EcoRI K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D BDI_0862 methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D BDI_3252 putative DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D BDI_3001 site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BDI_0861 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BDI_2979 Type III restriction-modification enzyme, helicase subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D BDI_2135 conserved hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D BDI_2980 adenine-specific DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D BDI_2134 methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D BDI_2433 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D BDI_2692 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D BDI_2156 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D BDI_0281 conserved hypothetical protein K03973 pspC; phage shock protein C
D BDI_2068 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D BDI_0881 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D BDI_0882 conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D BDI_0906 putative plasmid maintenance system antidote protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D BDI_3643 putative DNA binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D BDI_2483 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BDI_1884 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D BDI_3197 topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D BDI_3347 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D BDI_2289 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:pdi04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:pdi04090]
D BDI_2246 dipeptidyl aminopeptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BDI_2193 dipeptidyl aminopeptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BDI_3094 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D BDI_3713 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:pdi01504]
D BDI_0459 putative macrolide efflux pump K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D BDI_3317 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D BDI_0833 conserved hypothetical protein K02172 blaR1; bla regulator protein blaR1
D BDI_3215 TonB K02172 blaR1; bla regulator protein blaR1
D BDI_0832 conserved hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D BDI_3214 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D BDI_1493 acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0274 multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0380 AcrA/AcrE family multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_3331 putative membrane fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0973 putative transport-related, exported protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_2908 multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_0789 cation efflux system protein K03585 acrA; membrane fusion protein, multidrug efflux system
D BDI_3330 multidrug efflux membrane fusion protein K18138 acrB; multidrug efflux pump
D BDI_1492 putative aminoglycoside efflux pump K18138 acrB; multidrug efflux pump
D BDI_0971 multidrug efflux pump channel protein K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_0383 outer membrane protein oprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_0276 putative multidrug resistance protein K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_1491 outer membrane protein oprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D BDI_1311 periplasmic linker protein, putative multidrug resistance protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D BDI_3352 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3572 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D BDI_0791 outer membrane protein, putative K12340 tolC; outer membrane protein
D BDI_0684 conserved hypothetical protein, putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_0346 outer membrane efflux protein K12340 tolC; outer membrane protein
D BDI_3329 putative outer membrane protein TolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:pdi00536]
D BDI_1142 glycoside hydrolase family 84 K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pdi00537]
D BDI_0912 alkaline phosphatase, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BDI_3180 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BDI_1327 putative peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D BDI_3548 glutamine amidotransferase, class II/dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D BDI_1142 glycoside hydrolase family 84 K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pdi03100]
D BDI_0135 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_0365 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_2441 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_1791 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_3950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_2736 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_2859 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_3801 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BDI_3718 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_0678 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_0676 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_0454 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_3556 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_0677 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BDI_3653 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BDI_3655 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BDI_3654 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BDI_2015 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BDI_2014 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BDI_1429 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BDI_1832 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BDI_1831 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BDI_3059 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BDI_1851 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BDI_1852 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BDI_2304 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BDI_3551 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BDI_3553 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BDI_3687 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_3685 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_1086 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_0198 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_2274 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_0487 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BDI_0220 tRNA-His K14226 tRNA-His; tRNA His
D BDI_0221 tRNA-His K14226 tRNA-His; tRNA His
D BDI_0134 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_2860 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_3949 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_1792 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_0364 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_2442 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_2737 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BDI_1088 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_3307 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_1087 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_3788 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_3686 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_3194 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BDI_3360 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BDI_1267 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BDI_1703 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BDI_1702 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BDI_3495 tRNA-Met K14230 tRNA-Met; tRNA Met
D BDI_0355 tRNA-Met K14230 tRNA-Met; tRNA Met
D BDI_1499 tRNA-Met K14230 tRNA-Met; tRNA Met
D BDI_2752 tRNA-Met K14230 tRNA-Met; tRNA Met
D BDI_3850 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BDI_3939 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BDI_0345 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BDI_3849 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BDI_2541 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BDI_1712 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_1701 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_1802 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_1478 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_1713 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_3734 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BDI_2273 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BDI_1204 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BDI_2276 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BDI_0177 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BDI_3800 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BDI_2271 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BDI_3846 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BDI_1205 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BDI_0199 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BDI_2275 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BDI_3724 tRNA-Val K14237 tRNA-Val; tRNA Val
D BDI_3722 tRNA-Val K14237 tRNA-Val; tRNA Val
D BDI_3723 tRNA-Val K14237 tRNA-Val; tRNA Val
D BDI_0874 tRNA-Val K14237 tRNA-Val; tRNA Val
D BDI_2738 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_2861 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_3948 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_0133 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_2443 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_0363 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_1793 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BDI_2858 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_1790 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_2440 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_0366 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_3951 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_2735 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_0136 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BDI_0137 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_0367 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_1789 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_2734 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_3953 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_2857 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BDI_2439 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D BDI_1188 putative oxidoreductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D BDI_1800 indolepyruvate oxidoreductase subunit IorA K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D BDI_1799 indolepyruvate oxidoreductase subunit IorB K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D BDI_0433 NAD/NADP octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D BDI_1450 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D BDI_3397 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D BDI_2038 putative peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D BDI_1048 cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D BDI_0986 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D BDI_1451 putative bacterioferritin co-migratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D BDI_0458 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D BDI_3396 alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D BDI_3105 conserved hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D BDI_1042 NADP-reducing hydrogenase B chain - Desulfovibrio fructosovorans gi|466364|gb|AAA87055.1| potential NAD-reducing hydrogenase subunit K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D BDI_1045 NADH:ubiquinone oxidoreductase subunit K18330 hndA; NADP-reducing hydrogenase subunit HndA [EC:1.12.1.3]
D BDI_1043 NADH:ubiquinone oxidoreductase subunit K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D BDI_1044 NADH:ubiquinone oxidoreductase subunit K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D BDI_0091 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D BDI_0100 ferritin A K02217 ftnA; ferritin [EC:1.16.3.2]
D BDI_0257 ferritin A K02217 ftnA; ferritin [EC:1.16.3.2]
D BDI_3681 oxidoreductase, FAD-binding, putative K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D BDI_3512 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D BDI_3406 conserved hypothetical protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D BDI_3393 pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D BDI_1866 putative pyruvate formate-lyase 3 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D BDI_0787 pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D BDI_2259 putative ornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
D BDI_0824 putative acetyltransferase, GNAT family K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D BDI_1867 putative thiogalactoside transacetylase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D BDI_3414 galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D BDI_3719 acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D BDI_2175 putative acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D BDI_3310 putative acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D BDI_0059 conserved hypothetical protein K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281]
D BDI_0634 conserved hypothetical protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D BDI_3159 glycosyltransferase family 32 K22721 CSG1; inositol phosphorylceramide mannosyltransferase catalytic subunit [EC:2.4.1.370]
D BDI_3231 glycosyltransferase family 4 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D BDI_1842 glycosyltransferase family 4 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D BDI_3566 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D BDI_2509 thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D BDI_0171 thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D BDI_3368 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D BDI_3836 UDP-galactose phosphate transferase K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36]
D BDI_2948 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D BDI_0056 sialic acid-specific 9-O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D BDI_1984 histone macro-H2A1-related protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D BDI_2742 carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D BDI_3192 putative thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D BDI_0019 capsular polysaccharide biosynthesis protein, putative K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D BDI_3239 putative capsular polysaccharide biosythesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D BDI_2222 capsular polysaccharide biosythesis protein, putative K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D BDI_2290 putative membrane-associated HD superfamily hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D BDI_3852 metallo-beta-lactamase superfamily protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D BDI_3735 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D BDI_3057 TatD-related DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D BDI_3881 glycoside hydrolase family 24 K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D BDI_3540 glycoside hydrolase family 13, candidate alpha-glycosidase K21575 susA; neopullulanase [EC:3.2.1.135]
D BDI_2746 glycoside hydrolase family 13, candidate alpha-glycosidase K21575 susA; neopullulanase [EC:3.2.1.135]
D BDI_2743 glycoside hydrolase family 13, candidate alpha-glycosidase K21575 susA; neopullulanase [EC:3.2.1.135]
D BDI_3381 glycoside hydrolase family 2, candidate beta-glycosidase K18577 EBM; mannosylglycoprotein endo-beta-mannosidase [EC:3.2.1.152]
D BDI_3102 glycoside hydrolase family 31, candidate alpha-glycosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D BDI_3141 conserved hypothetical protein K21065 E3.2.1.197; beta-1,2-mannosidase [EC:3.2.1.197]
D BDI_3064 conserved hypothetical protein K24289 E3.2.1.214; exo beta-1,2-glucooligosaccharide sophorohydrolase (non-reducing end) [EC:3.2.1.214]
D BDI_2646 conserved hypothetical protein K26288 E3.2.1.218; alpha-3'-ketoglucosidase [EC:3.2.1.218]
D BDI_2465 conserved hypothetical protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D BDI_2871 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BDI_3612 putative N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BDI_0021 N-acetylmuramoyl-L-alanine amidase, putative K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BDI_0290 putative N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BDI_0551 putative N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BDI_1593 putative N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BDI_0656 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D BDI_3078 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D BDI_3835 conserved hypothetical protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D BDI_0709 putative translation initiation inhibitor, putative endoribonuclease L-PSP, putative K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D BDI_2877 putative galactosamine-6-phosphate isomerase K02080 agaI; putative deaminase/isomerase [EC:3.5.99.-]
D BDI_0945 magnesium chelatase subunit I K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D BDI_1900 putative sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D BDI_0057 putative N-acyl-D-glucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11]
D BDI_2949 conserved hypothetical protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D BDI_2307 D-tagatose 3-epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D BDI_0103 conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D BDI_1739 peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D BDI_3202 putative FKBP-type peptidyl-prolyl cis-trans isomerase 1 K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D BDI_0029 hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D BDI_0559 putative ATP-grasp enzyme K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D BDI_2513 UDP-N-acetylmuramate-alanine ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D BDI_0514 electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D BDI_0515 electron transport complex, protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D BDI_0516 electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D BDI_1125 NADH:ubiquinone oxidoreductase, Na translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D BDI_1124 NADH:ubiquinone oxidoreductase, Na translocating, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D BDI_1123 NADH:ubiquinone oxidoreductase, Na translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D BDI_1122 NADH:ubiquinone oxidoreductase, Na translocating, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D BDI_1121 NADH:ubiquinone oxidoreductase, Na translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D BDI_1120 Na+-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D BDI_0915 cation-transporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D BDI_2198 putative transmembrane calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D BDI_0217 cation-transporting ATPase, P-type, putative zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D BDI_1544 conserved hypothetical protein K04767 acuB; acetoin utilization protein AcuB
D BDI_0582 oxidoreductase, putative glycolate oxidase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D BDI_0583 putative electron transport protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D BDI_0584 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D BDI_0513 electron transport complex, protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D BDI_0512 electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D BDI_0511 electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D BDI_0686 flavodoxin K03839 fldA; flavodoxin I
D BDI_1127 iron-sulfur cluster-binding protein, putative polyferredoxin K02574 napH; ferredoxin-type protein NapH
D BDI_0463 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D BDI_0645 putative pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D BDI_0544 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D BDI_2583 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D BDI_3721 conserved hypothetical protein K15977 K15977; putative oxidoreductase
D BDI_1804 acetyl-CoA synthetase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D BDI_1372 putative RNA binding protein with S1 RNA-binding domain K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D BDI_3707 conserved hypothetical protein K03668 hslJ; heat shock protein HslJ
D BDI_2397 FKBP-type peptidyl-prolyl cis-transisomerase K03545 tig; trigger factor
D BDI_0413 SsrA-binding protein K03664 smpB; SsrA-binding protein
D BDI_1808 hydrogenase expression/formation protein; HypC K04653 hypC; hydrogenase expression/formation protein HypC
D BDI_1809 hydrogenase isoenzymes formation protein; HypD K04654 hypD; hydrogenase expression/formation protein HypD
D BDI_1810 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D BDI_1807 hydrogenase maturation factor K04656 hypF; hydrogenase maturation protein HypF
D BDI_2803 magnesium chelatase subunit ChlI K07391 comM; magnesium chelatase family protein
D BDI_1522 conserved hypothetical protein K07397 yhfA; putative redox protein
D BDI_0525 conserved hypothetical protein, putative membrane-bound serine protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D BDI_2036 putative methylated-DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D BDI_2589 putative DNA repair protein K03630 radC; DNA repair protein RadC
D BDI_0457 conserved hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D BDI_2565 conserved hypothetical protein K07460 yraN; putative endonuclease
D BDI_3193 putative DNA processing Smf-like protein K04096 smf; DNA processing protein
D BDI_0879 putative phage large subunit terminase K06909 xtmB; phage terminase large subunit
D BDI_0504 putative AAA family ATPase protein K07478 ycaJ; putative ATPase
D BDI_3513 transposase K07484 K07484; transposase
D BDI_2233 transposase K07486 K07486; transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D BDI_0058 putative cation symporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D BDI_1079 cationic amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D BDI_0275 cation/multidrug efflux pump K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D BDI_0336 putative cation efflux transporter K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D BDI_0382 AcrB/AcrD family multidrug resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D BDI_0972 putative multidrug resistance/siderophore transport related, membrane protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D BDI_1911 putative H+/peptide symporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D BDI_1368 osmo-regulated proline transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D BDI_2890 Na+-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D BDI_2895 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D BDI_0245 putative sodium-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D BDI_1825 nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D BDI_1414 putative O-antigen transporter K03328 TC.PST; polysaccharide transporter, PST family
D BDI_1750 potassium uptake protein TrkA, putative K07085 K07085; putative transport protein
D BDI_1937 putative transport protein K07085 K07085; putative transport protein
D BDI_1071 putative transport protein K07085 K07085; putative transport protein
C 99978 Cell growth
D BDI_2598 conserved hypothetical protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D BDI_2212 conserved hypothetical protein K06320 cgeB; spore maturation protein CgeB
D BDI_3177 peptidase, M23/M37 family, putative K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D BDI_2769 GTP-binding protein TypA K06207 typA; GTP-binding protein
D BDI_1986 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D BDI_0770 PhoH-like protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D BDI_3700 cationic outer membrane protein OmpH K06142 hlpA; outer membrane protein
D BDI_3701 cationic outer membrane protein OmpH K06142 hlpA; outer membrane protein
D BDI_2091 conserved hypothetical protein K06142 hlpA; outer membrane protein
D BDI_1534 conserved hypothetical protein, putative membrane protein K01993 ABC-2.TX; HlyD family secretion protein
D BDI_0141 conserved hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein
D BDI_3353 periplasmic component of efflux system K02005 ABC.CD.TX; HlyD family secretion protein
D BDI_0347 efflux transporter, MFP component, RND family K02005 ABC.CD.TX; HlyD family secretion protein
D BDI_3573 membrane fusion efflux protein K02005 ABC.CD.TX; HlyD family secretion protein
D BDI_1971 ABC transporter permease K02005 ABC.CD.TX; HlyD family secretion protein
D BDI_1560 conserved hypothetical protein K21571 susE_F; starch-binding outer membrane protein SusE/F
C 99994 Others
D BDI_2421 putative transcriptional regulator K02039 phoU; phosphate transport system protein
D BDI_0272 putative copper homeostasis protein K06201 cutC; copper homeostasis protein
D BDI_2603 putative iron-regulated protein A precursor K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D BDI_3535 conserved hypothetical protein K03558 cvpA; membrane protein required for colicin V production
D BDI_1529 conserved hypothetical protein K04477 ycdX; putative hydrolase
D BDI_0679 putative patatin-like phospholipase K07001 K07001; NTE family protein
D BDI_3773 conserved hypothetical protein K07001 K07001; NTE family protein
D BDI_3218 putative exported protein K07001 K07001; NTE family protein
D BDI_2508 hydrolase, haloacid dehalogenase-like family K07025 K07025; putative hydrolase of the HAD superfamily
D BDI_3413 haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D BDI_3536 ABC transporter, permease K09014 sufB; Fe-S cluster assembly protein SufB
D BDI_3538 putative ABC transporter protein K09015 sufD; Fe-S cluster assembly protein SufD
D BDI_0357 ribonuclease BN K07058 K07058; membrane protein
D BDI_3546 conserved hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D BDI_1047 conserved hypothetical protein K03744 lemA; LemA protein
D BDI_3775 conserved hypothetical protein, putative membrane protein K03975 dedA; membrane-associated protein
D BDI_1390 conserved hypothetical protein K08974 K08974; putative membrane protein
D BDI_1922 conserved hypothetical protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D BDI_0920 transcriptional regulator K06871 K06871; uncharacterized protein
D BDI_2924 putative Fe-S oxidoreductase K06871 K06871; uncharacterized protein
D BDI_2936 arylsulfatase regulator K06871 K06871; uncharacterized protein
D BDI_3163 putative Fe-S oxidoreductase K06871 K06871; uncharacterized protein
D BDI_3662 putative transcriptional regulator K06871 K06871; uncharacterized protein
D BDI_1046 conserved hypothetical protein K06872 K06872; uncharacterized protein
D BDI_0980 putative hydrolase of the alpha/beta superfamily K06889 K06889; uncharacterized protein
D BDI_0234 conserved hypothetical protein K06889 K06889; uncharacterized protein
D BDI_2452 conserved hypothetical protein, putative phage baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W
D BDI_3712 putative archaeal ATPase K06921 K06921; uncharacterized protein
D BDI_0388 conserved hypothetical protein K06921 K06921; uncharacterized protein
D BDI_3714 conserved hypothetical protein K06950 K06950; uncharacterized protein
D BDI_3783 conserved hypothetical protein K06973 K06973; uncharacterized protein
D BDI_2044 conserved hypothetical protein K06975 K06975; uncharacterized protein
D BDI_3076 conserved hypothetical protein K06975 K06975; uncharacterized protein
D BDI_3910 conserved hypothetical protein K06996 K06996; uncharacterized protein
D BDI_0093 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein
D BDI_3088 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein
D BDI_3403 conserved hypothetical protein K07017 K07017; uncharacterized protein
D BDI_2173 conserved hypothetical protein K07071 K07071; uncharacterized protein
D BDI_1587 conserved hypothetical protein, putative nucleotidyltransferase K07075 K07075; uncharacterized protein
D BDI_1887 putative nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D BDI_1404 conserved hypothetical protein K07075 K07075; uncharacterized protein
D BDI_3639 conserved hypothetical protein K07075 K07075; uncharacterized protein
D BDI_2983 conserved hypothetical protein, putative nucleotidyltransferase K07075 K07075; uncharacterized protein
D BDI_2169 conserved hypothetical protein K07076 K07076; uncharacterized protein
D BDI_0691 nitroreductase K07078 K07078; uncharacterized protein
D BDI_0396 aldo/keto reductase K07079 K07079; uncharacterized protein
D BDI_0397 aldo/keto reductase K07079 K07079; uncharacterized protein
D BDI_3511 conserved hypothetical protein K07089 K07089; uncharacterized protein
D BDI_3509 putative permease K07089 K07089; uncharacterized protein
D BDI_2190 conserved hypothetical protein, putative phosphoesterase K07095 K07095; uncharacterized protein
D BDI_3658 putative phosphoesterase K07098 K07098; uncharacterized protein
D BDI_3659 conserved hypothetical protein, with a calcineurin-like phosphoesterase domain K07098 K07098; uncharacterized protein
D BDI_0334 putative short-chain dehydrogenase K07124 K07124; uncharacterized protein
D BDI_1774 conserved hypothetical protein K07133 K07133; uncharacterized protein
D BDI_2529 putative ATPase K07133 K07133; uncharacterized protein
D BDI_2764 conserved hypothetical protein K07133 K07133; uncharacterized protein
D BDI_3447 conserved hypothetical protein K07133 K07133; uncharacterized protein
D BDI_2120 conserved hypothetical protein K07133 K07133; uncharacterized protein
D BDI_1753 NAD-utilizing dehydrogenase K07137 K07137; uncharacterized protein
D BDI_0351 uncharacterized Fe-S center protein, putative ferredoxin K07138 K07138; uncharacterized protein
D BDI_2121 uncharacterized Fe-S center protein, putative ferredoxin K07138 K07138; uncharacterized protein
D BDI_2194 conserved hypothetical protein K07139 K07139; uncharacterized protein
D BDI_3123 putative transmembrane protein K07148 K07148; uncharacterized protein
D BDI_0638 putative membrane-associated protein K07148 K07148; uncharacterized protein
D BDI_3320 conserved hypothetical protein K07148 K07148; uncharacterized protein
D BDI_1400 conserved hypothetical protein K07164 K07164; uncharacterized protein
D BDI_3056 conserved hypothetical protein K08998 K08998; uncharacterized protein
D BDI_1824 conserved hypothetical protein K08999 K08999; uncharacterized protein
D BDI_2482 conserved hypothetical protein K09117 K09117; uncharacterized protein
D BDI_2253 conserved hypothetical protein K09702 K09702; uncharacterized protein
D BDI_0361 conserved hypothetical protein K09704 K09704; uncharacterized protein
D BDI_1741 conserved hypothetical protein K09790 K09790; uncharacterized protein
D BDI_1735 conserved hypothetical protein K09793 K09793; uncharacterized protein
D BDI_3897 conserved hypothetical protein K09807 K09807; uncharacterized protein
D BDI_1474 conserved hypothetical protein K00243 K00243; uncharacterized protein
D BDI_1226 conserved hypothetical protein K09861 K09861; uncharacterized protein
D BDI_2112 conserved hypothetical protein K09922 K09922; uncharacterized protein
D BDI_3335 conserved hypothetical protein K09955 K09955; uncharacterized protein
D BDI_1325 conserved hypothetical protein K09955 K09955; uncharacterized protein
D BDI_1748 conserved hypothetical protein K09992 K09992; uncharacterized protein
D BDI_0643 conserved hypothetical protein K01163 K01163; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 18, 2024