+D GENES KO #

  KEGG Orthology (KO) - Pyrococcus furiosus DSM 3638

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pfu00010] D PF0196 hypothetical protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D PF1784 ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D PF0312 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D PF1956 possible 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PF0613 hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D PF1920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PF1874 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D PF1057 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PF1959 phosphonopyruvate decarboxylase bcpc K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PF1188 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PF0043 phosphoenolpyruvate synthase (pyruvate, water dikinase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PF1768 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF1771 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF0754 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF1769 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF1772 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF0753 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF0608 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PF1540 acetyl coenzyme A synthetase (ADP forming) K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF0532 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF1838 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF0233 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF1837 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D PF1787 acetyl-CoA synthetase K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PF0464 glyceraldehyde-3-phosphate:ferredoxin oxidoreductase K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6] D PF0755 non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90] D PF0289 phosphoenolpyruvate carboxykinase (gtp) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:pfu00020] D PF0203 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PF0201 aconitate hydratase (aconitase) K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PF0202 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PF1768 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF1771 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF0754 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF1769 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF1772 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF0753 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF1770 2-keto acid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PF1773 2-keto acid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PF1767 2-keto acid:ferredoxin oxidoreductase subunit delta K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D PF1755 possible fumarate hydratase (fumarase) alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D PF1754 possible fumarate hydratase (fumarase) beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D PF0289 phosphoenolpyruvate carboxykinase (gtp) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:pfu00030] D PF0196 hypothetical protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D PF1688 transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PF1689 transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PF1258 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D PF0220 hexulose-6-phosphate synthase (d-arabino 3-hexulose 6-phosphate formaldehyde lyase) K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27] D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PF1886 sugar kinase K21056 E2.7.1.212; alpha-D-ribose-1-phosphate 5-kinase (ADP) [EC:2.7.1.212] D PF0122 translation initiation factor eIF-2b delta K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29] D PF0236 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PF0755 non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90] D PF1853 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D PF0346 aldehyde:ferredoxin oxidoreductase (aor) K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PF1203 formaldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PF1961 tungsten-containing formaldehyde ferredoxin oxidoreductase wor4 K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PF0024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PF1956 possible 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PF0613 hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D PF1784 ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D PF0312 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] C 00040 Pentose and glucuronate interconversions [PATH:pfu00040] D PF1355 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PF0771 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PF1356 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PF0770 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PF0108 fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:pfu00051] D PF1458 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PF1738 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PF0589 mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PF1728 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D PF0868 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D PF0108 fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D PF0591 hypothetical protein K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217] D PF0590 hypothetical protein K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D PF1956 possible 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PF0613 hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D PF1920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:pfu00052] D PF0445 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PF0441 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D PF0402 UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PF1788 NDP-sugar dehydratase or epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PF1356 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PF0770 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PF0073 beta-glucosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PF0356 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PF1208 beta-mannosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PF0363 beta-galactosidase precursor K12308 bgaB; beta-galactosidase [EC:3.2.1.23] C 00053 Ascorbate and aldarate metabolism D PF1355 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PF0771 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:pfu00500] D PF1356 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PF0770 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PF0442 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D PF2044 glycogen synthase K20812 glgA; glycogen synthase [EC:2.4.1.242] D PF1393 hypothetical protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D PF1535 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D PF1108 putative alpha-dextrin endo-1,6-alpha-glucosidase K01200 pulA; pullulanase [EC:3.2.1.41] D PF0477 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D PF1939 neopullulanase (alpha-amylase II) K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D PF0272 alpha-amylase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D PF0478 alpha-amylase K00701 cgt; cyclomaltodextrin glucanotransferase [EC:2.4.1.19] D PF1742 putative trehalose synthase K13057 treT; trehalose synthase [EC:2.4.1.245] D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PF0196 hypothetical protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D PF1458 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PF1738 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pfu00520] D PF1233 putative chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D PF1458 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PF1738 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PF0157 glucosamine-fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PF0362 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PF0861 phospho-sugar mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D PF0235 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D PF1630 UDP-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PF0794 UDP-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PF1631 NDP-sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D PF1357 UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PF1356 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PF0770 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PF1355 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PF0771 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PF0445 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PF0441 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D PF0402 UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PF1788 NDP-sugar dehydratase or epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PF0196 hypothetical protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D PF1728 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D PF0868 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D PF0589 mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D PF0767 pleiotropic regulatory protein degT K13010 per; perosamine synthetase [EC:2.6.1.102] C 00620 Pyruvate metabolism [PATH:pfu00620] D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PF1768 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF1771 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF0754 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF1769 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF1772 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF0753 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF0608 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PF1188 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PF0283 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D PF1540 acetyl coenzyme A synthetase (ADP forming) K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF0532 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF1838 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF0233 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF1837 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D PF1787 acetyl-CoA synthetase K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D PF1026 malate oxidoreductase (malic enzyme) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PF0674 ion gradient-generating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PF1755 possible fumarate hydratase (fumarase) alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D PF1754 possible fumarate hydratase (fumarase) beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D PF1975 hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D PF0289 phosphoenolpyruvate carboxykinase (gtp) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D PF0043 phosphoenolpyruvate synthase (pyruvate, water dikinase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PF0937 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D PF0941 leua homolog alpha-isopropylmalate synthase related K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D PF1678 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pfu00630] D PF0203 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PF0201 aconitate hydratase (aconitase) K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PF1948 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PF1946 methylmalonyl-CoAmutase, subunit alpha K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D PF1477 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D PF0319 putative phosphoglycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D PF0370 phosphoglycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D PF1419 hypothetical protein K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18] D PF1156 ribulose-1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PF1778 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PF1999 glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D PF2000 glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D PF1341 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PF1492 glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein D PF0024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PF1521 formate dehydrogenase alpha chain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] C 00640 Propanoate metabolism [PATH:pfu00640] D PF1540 acetyl coenzyme A synthetase (ADP forming) K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF0532 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF1838 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF0233 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF1837 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D PF1787 acetyl-CoA synthetase K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PF1232 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF1421 hypothetical 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF0513 putative glutamate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF1948 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PF1946 methylmalonyl-CoAmutase, subunit alpha K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D PF1477 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] C 00650 Butanoate metabolism [PATH:pfu00650] D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PF0674 ion gradient-generating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PF0673 methylmalonyl-CoAdecarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D PF0672 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D PF1344 putative maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1] D PF1232 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF1421 hypothetical 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF0513 putative glutamate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PF1768 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF1771 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF0754 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF1769 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF1772 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF0753 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF0972 acyl carrier protein synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D PF0935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:pfu00660] D PF0935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PF0938 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PF1679 putative 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PF0939 putative 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PF1680 putative 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PF0940 3-isopropylmalate dehydrogenase 2 K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:pfu00562] D PF2014 extragenic suppressor K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PF1616 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D PF1058 hypothetical protein K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34] D PF1920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pfu00190] D PF1444 NADH dehydrogenase subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D PF1443 NADH dehydrogenase subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D PF1442 NADH dehydrogenase subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D PF1445 NADH dehydrogenase subunit K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D PF1441 NADH dehydrogenase subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D PF1446 NADH dehydrogenase subunit K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D PF1447 NADH dehydrogenase subunit K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D PF0182 ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D PF0183 ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D PF0180 ATPase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D PF0184 ATPase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D PF0179 ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D PF0181 ATPase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D PF0176 ATPase subunit B K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D PF0177 ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D PF0178 ATPase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D PF0257 inorganic pyrophosphatase (pyrophosphate phospho-hydrolase) K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes [PATH:pfu00720] D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PF0043 phosphoenolpyruvate synthase (pyruvate, water dikinase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PF1975 hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D PF1755 possible fumarate hydratase (fumarase) alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D PF1754 possible fumarate hydratase (fumarase) beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PF1768 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF1771 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF0754 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PF1769 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF1772 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF0753 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PF1770 2-keto acid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PF1773 2-keto acid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PF1767 2-keto acid:ferredoxin oxidoreductase subunit delta K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D PF0202 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PF0201 aconitate hydratase (aconitase) K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PF1948 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PF1477 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D PF1946 methylmalonyl-CoAmutase, subunit alpha K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] C 00680 Methane metabolism [PATH:pfu00680] D PF1521 formate dehydrogenase alpha chain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PF1778 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PF0024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PF1975 hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D PF1956 possible 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PF0613 hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D PF1784 ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D PF0312 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D PF0220 hexulose-6-phosphate synthase (d-arabino 3-hexulose 6-phosphate formaldehyde lyase) K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27] D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PF0043 phosphoenolpyruvate synthase (pyruvate, water dikinase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PF1959 phosphonopyruvate decarboxylase bcpc K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PF1394 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PF1921 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PF1159 group II decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00910 Nitrogen metabolism [PATH:pfu00910] D PF0692 prismane protein homolog K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D PF1602 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PF1852 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PF1910 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PF0676 carbamate kinase-like carbamoylphosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:pfu00920] D PF1220 hypothetical protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PF1221 dissimilatory sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PF1952 iron-sulfur protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D PF1330 H-II gamma (hydrogenase subunit gamma) K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4] D PF0892 sulfhydrogenase gamma subunit K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4] D PF1329 H-II hydrogenase subunit beta K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4] D PF0891 sulfhydrogenase beta subunit K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4] D PF0894 sulfhydrogenase alpha subunit K17993 hydA; sulfhydrogenase subunit alpha [EC:1.12.1.3 1.12.1.5] D PF1332 H-II alpha (hydrogenase subunit alpha) K17993 hydA; sulfhydrogenase subunit alpha [EC:1.12.1.3 1.12.1.5] D PF0893 sulfhydrogenase delta subunit K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5] D PF1331 H-II delta (hydrogenase subunit delta) K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5] D PF1266 cystathionine gamma-lyase (gamma-cystathionase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pfu00061] D PF0149 putative alcohol dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:pfu00071] D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PF1197 NADH oxidase/nitrite reductase K00530 nroR; rubredoxin---NAD(P)+ reductase [EC:1.18.1.4] D PF0608 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pfu00561] D PF0024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PF2004 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] C 00564 Glycerophospholipid metabolism [PATH:pfu00564] D PF2005 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D PF2003 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PF1382 sn-glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D PF1039 hypothetical protein K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41] D PF1963 4-hydroxybenzoate octaprenyltransferase, putative K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42] D PF0398 hypothetical protein K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67] D PF0097 bacteriochlorophyll synthase, 43 kDa subunit homolog K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism D PF0073 beta-glucosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PF0356 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PF1208 beta-mannosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pfu00230] D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PF0236 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PF0154 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PF0422 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D PF0430 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D PF0199 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D PF0197 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D PF0198 phosphoribosylformylglycinamidine synthase (FGAM synthase i) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PF0431 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D PF0426 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D PF0427 phosphoribosylaminoimidazole carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D PF0153 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D PF0667 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PF1517 hypothetical protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D PF0421 hypothetical protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D PF0285 inosine-5'-monophosphate dehydrogenase (imp dehydrogenase) K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PF0931 nucleoside diphosphate kinase (ndk) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PF0249 ham1 protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D PF1515 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PF1516 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PF0853 5'-methylthioadenosine phosphorylase II K26211 K26211; guanosine phosphorylase [EC:2.4.2.15] D PF0440 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PF1971 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PF1859 hypothetical protein K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D PF0863 hypothetical protein K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D PF0308 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PF1607 thymidine phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D PF1800 adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3] D PF1045 adenylate kinase (adk) K00939 adk; adenylate kinase [EC:2.7.4.3] D PF1134 hypothetical protein K18532 AK6; adenylate kinase [EC:2.7.4.3] D PF0501 gtpase domain, related to era and thdf K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D PF0008 hit family protein (hit) K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D PF1220 hypothetical protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PF1221 dissimilatory sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PF0676 carbamate kinase-like carbamoylphosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:pfu00240] D PF1714 carbamoyl-phosphate synthase large chain (glutamine-hydrolysing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PF1713 carbamoyl-phosphate synthase, small (or glutamine) subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PF0599 aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PF0598 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PF0189 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D PF1539 dihydroorotate dehydrogenase (dihydroorotate oxidase) (dhodehase) K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D PF0188 hydrogenase subunit gamma K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D PF1034 orotate phosphoribosyl transferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D PF1114 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D PF1407 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D PF0931 nucleoside diphosphate kinase (ndk) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PF0216 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D PF1839 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D PF0820 cytidylate kinase (ck) (cytidine monophosphate kinase) (CMP kinase) K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D PF1241 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D PF1607 thymidine phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D PF1971 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PF1996 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D PF0440 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PF1598 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D PF1730 thymidylate kinase (tmk) K00943 tmk; dTMP kinase [EC:2.7.4.9] D PF0540 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pfu00250] D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF1976 l-aspartate oxidase (quinolinate synthetase) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PF0980 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D PF2047 l-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PF0142 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PF1071 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PF0792 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PF1497 putative transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PF0207 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PF0208 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PF0308 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PF0667 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PF0599 aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PF0598 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PF1232 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF1421 hypothetical 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF0513 putative glutamate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF1852 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PF1910 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PF1602 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PF1714 carbamoyl-phosphate synthase large chain (glutamine-hydrolysing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PF1713 carbamoyl-phosphate synthase, small (or glutamine) subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PF0198 phosphoribosylformylglycinamidine synthase (FGAM synthase i) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PF0157 glucosamine-fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PF0362 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PF0154 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pfu00260] D PF1053 aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4] D PF1052 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PF1056 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PF1104 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PF1054 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D PF0031 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PF1055 threonine synthase (pyridoxal phosphate binding) K01733 thrC; threonine synthase [EC:4.2.3.1] D PF1406 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PF1639 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PF1180 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PF1778 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PF0024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PF1959 phosphonopyruvate decarboxylase bcpc K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PF1394 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PF1921 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PF0265 2-amino-3-ketobutyrate CoA ligase (glycine acetyl transferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D PF0991 possible threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D PF1999 glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D PF2000 glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D PF1341 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PF1492 glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein D PF1705 tryptophan synthetase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PF1706 tryptophan synthase, subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PF1592 tryptophan synthase, subunit beta homolog K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:pfu00270] D PF1269 methionine synthase, vitamin-B12 independent isozyme) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PF1268 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PF1866 hypothetical protein K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PF1930 hypothetical protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PF0127 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D PF0016 5'-methylthioadenosine phosphorylase I K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D PF1538 n-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D PF1349 translation initiation factor eIF-2 beta chain K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D PF0049 site-specific DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PF0343 s-adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PF0010 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D PF1053 aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4] D PF1052 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PF1056 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PF1104 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PF1266 cystathionine gamma-lyase (gamma-cystathionase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF1394 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PF0380 hypothetical protein K23370 serK; L-serine kinase (ADP) [EC:2.7.1.226] C 00280 Valine, leucine and isoleucine degradation [PATH:pfu00280] D PF0969 2-ketovalerate ferredoxin oxidoreductase subunit alpha-2 K00186 vorA; 2-oxoisovalerate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.7] D PF0968 2-ketovalerate ferredoxin oxidoreductase subunit beta-2 K00187 vorB; 2-oxoisovalerate ferredoxin oxidoreductase beta subunit [EC:1.2.7.7] D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PF0970 2-ketovalerate ferredoxin oxidoreductase subunit delta-2 K00188 vorD; 2-oxoisovalerate ferredoxin oxidoreductase delta subunit [EC:1.2.7.7] D PF1948 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PF1946 methylmalonyl-CoAmutase, subunit alpha K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D PF1477 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D PF0716 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PF0972 acyl carrier protein synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pfu00290] D PF0938 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PF1679 putative 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PF0939 putative 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PF1680 putative 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PF0940 3-isopropylmalate dehydrogenase 2 K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D PF0935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PF0936 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PF0942 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PF1497 putative transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PF0937 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D PF0941 leua homolog alpha-isopropylmalate synthase related K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D PF1678 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:pfu00300] D PF1104 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PF1053 aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4] D PF1052 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PF1056 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PF0657 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PF2048 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PF0121 putative aspartate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D PF1681 hypothetical protein K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D PF0209 ribosomal protein s6 modification protein K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43] D PF1682 ribosomal protein s6 modification protein K25032 K25032; alpha-aminoadipate-LysW ligase/glutamate-LysW ligase [EC:6.3.2.43 6.3.2.60] D PF1684 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D PF1683 n-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D PF1685 acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D PF1686 acetylornithine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00310 Lysine degradation D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:pfu00220] D PF0594 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D PF0207 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PF0208 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PF0198 phosphoribosylformylglycinamidine synthase (FGAM synthase i) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PF1602 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PF0676 carbamate kinase-like carbamoylphosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2] D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF1497 putative transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PF1185 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] D PF1681 hypothetical protein K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D PF1682 ribosomal protein s6 modification protein K25032 K25032; alpha-aminoadipate-LysW ligase/glutamate-LysW ligase [EC:6.3.2.43 6.3.2.60] D PF1684 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D PF1683 n-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D PF1685 acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D PF1686 acetylornithine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00330 Arginine and proline metabolism [PATH:pfu00330] D PF1623 hypothetical protein K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D PF1957 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D PF0499 metal-binding protein K01480 speB; agmatinase [EC:3.5.3.11] D PF0127 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D PF1930 hypothetical protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PF1099 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4] D PF1715 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:pfu00340] D PF1658 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D PF1657 histidyl-tRNA synthetase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D PF1664 phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-atp K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D PF1662 n-(5'-phospho-d-ribosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D PF1661 glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D PF1663 imidazoleglycerol-phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D PF1660 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PF1659 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:pfu00350] D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PF1159 group II decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D PF0608 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00360 Phenylalanine metabolism [PATH:pfu00360] D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PF1099 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:pfu00380] D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PF1099 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pfu00400] D PF1690 2-dehydro-3-deoxyphosphoheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PF1691 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D PF1692 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D PF1693 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D PF1694 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71] D PF1699 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D PF1700 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D PF1709 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PF1708 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PF1710 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D PF1707 phosphoribosyl anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D PF1711 indoleglycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D PF1705 tryptophan synthetase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PF1706 tryptophan synthase, subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PF1592 tryptophan synthase, subunit beta homolog K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PF1701 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D PF1703 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D PF0291 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pfu00410] D PF1159 group II decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D PF1232 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF1421 hypothetical 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF0513 putative glutamate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF1387 hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D PF1618 ATP-binding protein phnp K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:pfu00450] D PF1266 cystathionine gamma-lyase (gamma-cystathionase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PF1269 methionine synthase, vitamin-B12 independent isozyme) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PF1268 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PF0164 nifS protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D PF1422 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PF1220 hypothetical protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PF1221 dissimilatory sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PF1030 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pfu00460] D PF0442 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D PF2047 l-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PF0142 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PF1778 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:pfu00470] D PF0198 phosphoribosylformylglycinamidine synthase (FGAM synthase i) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PF0980 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 00480 Glutathione metabolism [PATH:pfu00480] D PF1272 lactam utilization protein homolog K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D PF0202 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PF0127 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:pfu00511] D PF0073 beta-glucosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PF0356 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PF1208 beta-mannosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pfu00730] D PF1531 thiamine biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D PF1333 phosphomethylpyrimidine kinase (hmp-phosphate kinase) K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D PF1288 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PF1487 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PF1835 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PF1530 thiamine biosynthetic enzyme K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59] D PF1335 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D PF1334 thiamine phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D PF1877 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D PF0501 gtpase domain, related to era and thdf K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D PF1004 alkaline phosphatase IV precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PF1800 adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3] D PF1045 adenylate kinase (adk) K00939 adk; adenylate kinase [EC:2.7.4.3] D PF1338 transcriptional activator, putative K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D PF1337 transcriptional activator, putative K20896 TENA_E; formylaminopyrimidine deformylase / aminopyrimidine aminohydrolase [EC:3.5.1.- 3.5.99.-] C 00740 Riboflavin metabolism [PATH:pfu00740] D PF0064 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PF0062 riboflavin-specific deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PF0063 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D PF0061 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D PF0988 hypothetical protein K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161] D PF1116 glycerol-3-phosphate cytidyltransferase K14656 ribL; FAD synthetase [EC:2.7.7.2] D PF1335 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D PF0865 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:pfu00750] D PF0031 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PF1055 threonine synthase (pyridoxal phosphate binding) K01733 thrC; threonine synthase [EC:4.2.3.1] D PF1406 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PF1639 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PF1180 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PF1529 ethylene-inducible protein homolog K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D PF1528 imidazoleglycerol-phosphate synthase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:pfu00760] D PF1976 l-aspartate oxidase (quinolinate synthetase) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PF1977 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D PF1978 nicotinate-nucleotide pyrophosphorylase (quinolinate phosphoribosyltransferase (decarboxylating)) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D PF1904 nicotinate-nucleotide pyrophosphorylase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D PF0458 nucleotidyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D PF0098 NH(3)-dependent NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D PF1105 pyrazinamidase/nicotinamidase pxnc K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D PF1154 transcriptional regulatory protein, sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D PF1103 hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D PF1344 putative maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:pfu00770] D PF0935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PF0936 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PF0942 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PF1143 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D PF1396 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D PF1869 hypothetical protein K06982 pok; pantoate kinase [EC:2.7.1.169] D PF1387 hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D PF1440 dna/pantothenate metabolism flavoprotein (dfp) K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D PF1084 hypothetical protein K02201 E2.7.7.3B; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D PF0366 hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D PF0254 hypothetical protein K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237] D PF1159 group II decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00780 Biotin metabolism [PATH:pfu00780] D PF0149 putative alcohol dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PF1676 biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PF0077 biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:pfu00785] D PF1158 hypothetical protein K09711 lipS1; lipoyl synthase D PF0144 hypothetical protein K24689 lipS2; lipoyl synthase D PF1374 lipoate-protein ligase a K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D PF1634 hypothetical protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D PF1999 glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D PF2000 glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D PF1341 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PF1492 glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pfu00790] D PF1004 alkaline phosphatase IV precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PF1296 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D PF0064 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PF0219 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PF1277 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PF0048 succinoglycan biosynthesis regulator K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PF1832 regulatory protein K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39] D PF0930 hypothetical protein K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D PF0903 hypothetical protein K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D PF2022 hypothetical protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D PF1278 hypothetical protein K22102 E4.1.2.59; dihydroneopterin phosphate aldolase [EC:4.1.2.59] D PF0090 molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PF1854 molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PF0100 molybdopterin converting factor (subunit 2) K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PF0372 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D PF0542 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PF1783 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PF0618 molybdopterin-guanine dinucleotide biosynthesis protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:pfu00670] D PF1778 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PF1341 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PF0540 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pfu00860] D PF1753 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PF2038 cob(i)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PF0301 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D PF0296 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D PF0305 hypothetical protein K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90] D PF0300 hypothetical protein K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62] D PF0299 cobalamin (5'-phosphate) synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D PF0836 cobalamin (5'-phosphate) synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis D PF0865 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pfu00900] D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PF0972 acyl carrier protein synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D PF1848 3-hydroxy-3-methylglutaryl-coenzyme a reductase (hmg-CoAreductase) K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D PF1637 mevalonate kinase (mvk) K00869 MVK; mevalonate kinase [EC:2.7.1.36] D PF1636 acetylglutamate kinase, putative K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26] D PF0390 hypothetical protein K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182] D PF0391 hypothetical protein K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182] D PF1138 hypothetical protein K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126] D PF0865 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PF0856 hypothetical protein K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D PF1102 bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PF1599 undecaprenyl diphosphate synthase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D PF1688 transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PF1689 transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D PF0446 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PF0235 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 01054 Nonribosomal peptide structures [PATH:pfu01054] D PF0980 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:pfu00946] D PF0442 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:pfu00261] D PF1220 hypothetical protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PF1221 dissimilatory sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PF1053 aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4] D PF1052 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PF1056 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PF0657 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pfu00521] D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PF1616 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D PF2014 extragenic suppressor K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PF0446 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PF0235 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis D PF0446 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PF0235 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 00401 Novobiocin biosynthesis [PATH:pfu00401] D PF1703 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D PF1709 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PF1708 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D PF0149 putative alcohol dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:pfu00999] D PF1866 hypothetical protein K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PF1693 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D PF0442 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:pfu00362] D PF0674 ion gradient-generating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PF0673 methylmalonyl-CoAdecarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D PF0672 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:pfu00627] D PF1099 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4] D PF0283 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D PF0865 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:pfu00625] D PF0608 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PF0463 hydrolase related to 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D PF0463 hydrolase related to 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:pfu00643] D PF1099 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:pfu00626] D PF0608 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pfu03020] D PF1564 DNA-directed RNA polymerase subunit b K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D PF1563 DNA-directed RNA polymerase subunit a' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D PF1562 DNA-directed RNA polymerase subunit a K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D PF1647 DNA-directed RNA polymerase subunit d K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D PF0050 DNA-directed RNA polymerase subunit l K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D PF0256 DNA-directed RNA polymerase, subunit e' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D PF1036 hypothetical protein K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D PF1565 DNA-directed RNA polymerase subunit h K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D PF1642 DNA-directed RNA polymerase subunit k K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D PF1643 DNA-directed RNA polymerase subunit n K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D PF2009 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] C 03022 Basal transcription factors [PATH:pfu03022] D PF1377 transcription initiation factor IIB chain b K03124 TFIIB; transcription initiation factor TFIIB D PF0687 transcription initiation factor IIB chain b homolog K03124 TFIIB; transcription initiation factor TFIIB D PF1295 transcription initiation factor TFIID (TATA-box factor) chain a (TATA sequence-binding protein) (tbp) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D PF0491 transcription initiation factor TFIIE K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D PF0933 DNA repair helicase rad3, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pfu03010] D PF1640 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D PF1819 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D PF1649 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D PF1804 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D PF1558 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D PF1809 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D PF1644 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D PF1376 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D PF1648 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D PF1559 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D PF1650 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D PF1810 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D PF2056 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D PF1815 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D PF1821 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D PF2054 SSU ribosomal protein S3AE K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D PF1812 SSU ribosomal protein S4E K02987 RP-S4e; small subunit ribosomal protein S4e D PF0488 SSU ribosomal protein S6E K02991 RP-S6e; small subunit ribosomal protein S6e D PF1069 SSU ribosomal protein S8E K02995 RP-S8e; small subunit ribosomal protein S8e D PF1491 SSU ribosomal protein S17E K02962 RP-S17e; small subunit ribosomal protein S17e D PF1499 SSU ribosomal protein S19E K02966 RP-S19e; small subunit ribosomal protein S19e D PF0253 SSU ribosomal protein S24E K02974 RP-S24e; small subunit ribosomal protein S24e D PF0218 SSU ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e D PF0252 SSU ribosomal protein S27AE K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PF1368 SSU ribosomal protein S28E K02979 RP-S28e; small subunit ribosomal protein S28e D PF1992 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D PF1822 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D PF1825 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D PF1811 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D PF1808 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D PF1993 LSU ribosomal protein L10E K02864 RP-L10; large subunit ribosomal protein L10 D PF1991 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D PF1994 LSU ribosomal protein L12A K02869 RP-L12; large subunit ribosomal protein L12 D PF1645 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D PF1814 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D PF1802 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D PF1805 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D PF1820 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D PF1823 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D PF1813 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D PF1818 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D PF1803 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D PF1824 LSU ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e D PF1367 LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D PF1279 LSU ribosomal protein L10 K02866 RP-L10e; large subunit ribosomal protein L10e D PF0819 LSU ribosomal protein L14E K02875 RP-L14e; large subunit ribosomal protein L14e D PF0876 LSU ribosomal protein L15E K02877 RP-L15e; large subunit ribosomal protein L15e D PF1646 LSU ribosomal protein L18E K02883 RP-L18e; large subunit ribosomal protein L18e D PF1806 LSU ribosomal protein L19E K02885 RP-L19e; large subunit ribosomal protein L19e D PF1035 LSU ribosomal protein L21E K02889 RP-L21e; large subunit ribosomal protein L21e D PF1369 LSU ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e D PF1561 LSU ribosomal protein L30E K02908 RP-L30e; large subunit ribosomal protein L30e D PF0378 LSU ribosomal protein L31E K02910 RP-L31e; large subunit ribosomal protein L31e D PF1807 LSU ribosomal protein L32E K02912 RP-L32e; large subunit ribosomal protein L32e D PF0821 LSU ribosomal protein L34 K02915 RP-L34e; large subunit ribosomal protein L34e D PF1872 LSU ribosomal protein L35AE K02917 RP-L35Ae; large subunit ribosomal protein L35Ae D PF1541 LSU ribosomal protein L37E K02922 RP-L37e; large subunit ribosomal protein L37e D PF2008 LSU ribosomal protein L37AE K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D PF0379 LSU ribosomal protein L39E K02924 RP-L39e; large subunit ribosomal protein L39e D PF1475 LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D PF1018 LSU ribosomal protein L41E K02928 RP-L41e; large subunit ribosomal protein L41e D PF0217 LSU ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e D PF0376 LSU ribosomal protein LXA K02944 RP-LX; large subunit ribosomal protein LX D PF_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PF_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PF_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PF_r004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pfu00970] D PF_t018 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PF_t020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PF_t003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PF_t004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PF_t017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PF_t045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PF_t009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PF_t013 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PF_t027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PF_t041 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PF_t031 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PF_t008 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PF_t011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PF_t006 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PF_t015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PF_t001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PF_t024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PF_t010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PF_t046 tRNA-His K14226 tRNA-His; tRNA His D PF_t016 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PF_t034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PF_t007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PF_t019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PF_t039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PF_t025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PF_t030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PF_t012 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PF_t026 tRNA-Met K14230 tRNA-Met; tRNA Met D PF_t005 tRNA-Met K14230 tRNA-Met; tRNA Met D PF_t029 tRNA-Met K14230 tRNA-Met; tRNA Met D PF_t002 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PF_t038 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PF_t036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PF_t044 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PF_t028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PF_t014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PF_t032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PF_t040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PF_t035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PF_t033 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PF_t037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PF_t022 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D PF_t023 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PF_t042 tRNA-Val K14237 tRNA-Val; tRNA Val D PF_t021 tRNA-Val K14237 tRNA-Val; tRNA Val D PF_t043 tRNA-Val K14237 tRNA-Val; tRNA Val D PF1753 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PF1461 l-asparaginase (l-asparagine amidohydrolase) asparaginase K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] D PF1462 pet112-like protein K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] D PF0270 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0086 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0185 partial alanyl-tRNA synthetase matches COOH terminus half K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0428 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0869 aspartyl tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D PF0155 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PF1951 partial asparaginyl-tRNA synthetase matches COOH terminus K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PF1627 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PF1351 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PF1204 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PF1024 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PF1030 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PF0290 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PF0890 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PF1096 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PF0135 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PF1380 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PF1293 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PF0264 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PF0989 phenylalanyl-tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PF0990 phenylalanyl-tRNA synthetase beta-chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PF0862 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PF0241 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pfu03060] D PF1801 preprotein translocase K03076 secY; preprotein translocase subunit SecY D PF0174 protein export membrane protein K03072 secD; preprotein translocase subunit SecD D PF0173 protein-export membrane protein K03074 secF; preprotein translocase subunit SecF D PF1731 signal recognition particle protein srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PF_s002 signal recognition particle; structural RNA K01983 ffs; SRP RNA D PF1766 signal recognition particle receptor (dpa) K03110 ftsY; fused signal recognition particle receptor D PF1989 protein transport protein sec61 gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D PF1894 hypothetical protein K03105 SRP19; signal recognition particle subunit SRP19 D PF0326 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D PF0313 signal sequence peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:pfu04122] D PF0100 molybdopterin converting factor (subunit 2) K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PF0090 molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PF0543 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein D PF0345 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein D PF1605 hypothetical protein K03636 moaD; sulfur-carrier protein D PF0003 moeB-like protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D PF1289 molybdopterin biosynthesis protein moeb K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D PF0009 thiamine biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D PF1854 molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PF0372 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D PF1288 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PF1487 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PF1835 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PF1061 hypothetical protein K03154 thiS; sulfur carrier protein C 03050 Proteasome [PATH:pfu03050] D PF0115 ATP-dependent 26S protease regulatory subunit K03420 psmR; proteasome regulatory subunit D PF1571 proteasome, subunit alpha (multicatalytic endopeptidase complex alpha subunit) K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D PF0159 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PF1404 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:pfu03018] D PF0052 hypothetical protein K07573 CSL4; exosome complex component CSL4 D PF1569 hypothetical protein K03679 RRP4; exosome complex component RRP4 D PF1567 hypothetical protein K12589 RRP42; exosome complex component RRP42 D PF1568 ribonuclease ph (rph) K11600 RRP41; exosome complex component RRP41 D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PF1101 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] B B 09124 Replication and repair C 03030 DNA replication [PATH:pfu03030] D PF1725 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D PF1781 RNaseH II K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PF0212 DNA-directed DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D PF0018 DNA polymerase II subunit 1 K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D PF0019 DNA polymerase II subunit 2 K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D PF0482 cell division control protein 21 K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D PF0110 DNA primase, putative K02683 priS; DNA primase small subunit [EC:2.7.7.102] D PF0111 hypothetical protein K18882 priL; DNA primase large subunit D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen D PF0093 replication factor C, small subunit K04801 rfcS; replication factor C small subunit D PF0092 replication factor C, large subunit K04800 rfcL; replication factor C large subunit D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03410 Base excision repair [PATH:pfu03410] D PF1229 glycosylase putative; mutY-nth family K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D PF0511 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D PF1385 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PF0258 putative endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D PF2055 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03420 Nucleotide excision repair [PATH:pfu03420] D PF0933 DNA repair helicase rad3, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03430 Mismatch repair [PATH:pfu03430] D PF0474 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D PF2055 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03440 Homologous recombination D PF2055 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03450 Non-homologous end-joining D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 D PF0255 DNA-directed RNA polymerase, subunit e'' K15171 SUPT4H1; transcription elongation factor SPT4 D PF1990 transcription antitermination protein nusG K15172 SUPT5H; transcription elongation factor SPT5 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pfu02010] D PF0080 hypothetical protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D PF0081 sulfate/thiosulfate transport protein homolog cyst K15496 wtpB; molybdate/tungstate transport system permease protein D PF0082 membrane protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D PF1518 thiamin-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein D PF1751 putative solute binding lipoprotein K02064 thiB; thiamine transport system substrate-binding protein D PF1520 ABC transporter integral membrane protein K02063 thiP; thiamine transport system permease protein D PF1748 putative sulfate transport system permease protein, ABC transporter K02063 thiP; thiamine transport system permease protein D PF1749 putative sulfate transport integral membrane protein K02063 thiP; thiamine transport system permease protein D PF1519 sugar-binding transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D PF1750 putative sugar-binding transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D PF1933 putative sugar transport ATP-hydrolyzing K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PF1744 trehalose/maltose transport ATP-hydrolyzing K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PF1970 putative multiple sugar-binding transport ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PF1938 putative sugar binding protein (malE-like) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D PF1937 putative sugar transport inner membrane protein (malf-like) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PF1936 putative sugar transport inner membrane protein (malg-like) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PF1739 trehalose/maltose binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D PF1740 trehalose/maltose transport inner membrane protein K10237 thuF; trehalose/maltose transport system permease protein D PF1741 trehalose/maltose transport inner membrane protein K10238 thuG; trehalose/maltose transport system permease protein D PF1695 hypothetical lipoprotein K07335 bmpA; basic membrane protein A and related proteins D PF1697 putative ribose/galactose ABC transporter K23535 nupB; general nucleoside transport system permease protein D PF1698 putative ribose ABC transporter K23536 nupC; general nucleoside transport system permease protein D PF1696 putative ABC sugar transporter K23537 nupA; general nucleoside transport system ATP-binding protein D PF0119 putative perplasmic sugar binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein D PF0118 putative ABC transporter permease protein K17238 inoF; inositol-phosphate transport system permease protein D PF0117 putative sugar transport protein K17239 inoG; inositol-phosphate transport system permease protein D PF0116 putative multiple sugar transport protein K17240 inoK; inositol-phosphate transport system ATP-binding protein D PF1003 phosphate-binding periplasmic protein precursor (pbp) K02040 pstS; phosphate transport system substrate-binding protein D PF1006 putative phosphate transport system permease protein C K02037 pstC; phosphate transport system permease protein D PF1007 phosphate transport system permease psta K02038 pstA; phosphate transport system permease protein D PF1008 putative ABC transport protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PF0530 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D PF0531 cobalamin biosynthesis protein m K02007 cbiM; cobalt/nickel transport system permease protein D PF0529 hypothetical protein K02008 cbiQ; cobalt/nickel transport system permease protein D PF0528 cobalt transport ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D PF1677 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D PF0067 cobalt transport ABC transporter, integral membrane component K16785 ecfT; energy-coupling factor transport system permease protein D PF1857 cobalt transport ATP-binding protein cbio K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PF0068 cobalt transport ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PF0579 hypothetical protein K16905 K16905; fluoroquinolone transport system permease protein D PF0578 hypothetical protein K16906 K16906; fluoroquinolone transport system permease protein D PF0577 ATP-binding transport protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:pfu03070] D PF0174 protein export membrane protein K03072 secD; preprotein translocase subunit SecD D PF0173 protein-export membrane protein K03074 secF; preprotein translocase subunit SecF D PF1801 preprotein translocase K03076 secY; preprotein translocase subunit SecY D PF1766 signal recognition particle receptor (dpa) K03110 ftsY; fused signal recognition particle receptor D PF1731 signal recognition particle protein srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:pfu02020] D PF1004 alkaline phosphatase IV precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PF1003 phosphate-binding periplasmic protein precursor (pbp) K02040 pstS; phosphate transport system substrate-binding protein D PF1721 hypothetical protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D PF1026 malate oxidoreductase (malic enzyme) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PF1630 UDP-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PF0794 UDP-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PF1631 NDP-sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pfu02024] D PF1709 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PF1708 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PF0062 riboflavin-specific deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PF0357 dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PF1209 oligopeptide ABC transporter (oligopeptide-binding protein) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PF1408 putative dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PF0190 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PF0191 oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D PF0358 ABC transporter (oppbc family) K02033 ABC.PE.P; peptide/nickel transport system permease protein D PF1210 dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D PF1409 dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D PF1001 oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D PF0192 hypothetical oligopeptide transport system permease protein appc K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PF0359 oligopeptide ABC transport system permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PF1211 dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PF1410 dipeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PF1000 oligopeptide transport system permease protein appc K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PF0193 putative ABC transport ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PF0360 oligopeptide ABC transporter (ATP-binding protein) K02031 ddpD; peptide/nickel transport system ATP-binding protein D PF1212 putative peptide ABC uptake protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PF1411 dipeptide transport ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PF0194 dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D PF0361 oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein D PF1213 oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein D PF1412 dipeptide transport ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D PF1801 preprotein translocase K03076 secY; preprotein translocase subunit SecY D PF1766 signal recognition particle receptor (dpa) K03110 ftsY; fused signal recognition particle receptor D PF1731 signal recognition particle protein srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D PF1947 hypothetical protein K07588 MMAA; GTPase [EC:3.6.5.-] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pfu01000] C 01001 Protein kinases [BR:pfu01001] D PF0473 o-sialoglycoprotein endopeptidase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D PF1581 rio1 protein, putative K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D PF0364 tyrosine-protein kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C 01009 Protein phosphatases and associated proteins [BR:pfu01009] D PF0481 translation initiation factor eIF-2, subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D PF0343 s-adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PF1921 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:pfu01002] D PF0471 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D PF0975 frxA K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D PF0617 hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D PF1299 pyroglutamyl-peptidase i K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D PF1515 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PF1516 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PF0154 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PF0157 glucosamine-fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PF0362 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PF1071 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PF0792 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PF1719 intracellular protease K26818 pfpI; archaeal arginyl aminopeptidase [EC:3.4.11.27] D PF2048 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PF0541 methionine aminopeptidase (map) (peptidase m) K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PF1343 xaa-pro dipeptidase (proline dipeptidase) K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D PF0456 carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D PF1547 endoglucanase K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-] D PF1861 endo-1,4-beta-glucanase-like protein K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-] D PF1135 htpx heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D PF1860 hypothetical protein K06974 amzA; archaemetzincin [EC:3.4.-.-] D PF1833 hypothetical protein K06974 amzA; archaemetzincin [EC:3.4.-.-] D PF1591 dipeptide transport protein K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D PF2049 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D PF1924 d-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D PF1670 alkaline serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-] D PF0825 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D PF0467 ATP-dependent protease LA (lon) K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D PF0326 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D PF0313 signal sequence peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] D PF1583 protease iv K04773 sppA; protease IV [EC:3.4.21.-] D PF1571 proteasome, subunit alpha (multicatalytic endopeptidase complex alpha subunit) K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D PF0159 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PF1404 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PF0142 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PF1077 hypothetical protein K03592 pmbA; PmbA protein D PF1076 TLDD protein homolog K03568 tldD; TldD protein D PF0160 TLDD protein homolog K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:pfu01003] D PF0394 UDP-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] D PF0411 protein-export membrane protein K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21] D PF0156 oligosaccharyl transferase stt3 subunit related protein K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21] D PF0058 dolichol monophosphate mannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D PF0591 hypothetical protein K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pfu01005] C 01011 Peptidoglycan biosynthesis and degradation proteins C 01004 Lipid biosynthesis proteins [BR:pfu01004] D PF0149 putative alcohol dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PF1540 acetyl coenzyme A synthetase (ADP forming) K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF0532 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF1838 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF0233 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PF1837 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D PF1787 acetyl-CoA synthetase K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] C 01008 Polyketide biosynthesis proteins [BR:pfu01008] D PF0980 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:pfu01006] D PF1102 bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] C 01007 Amino acid related enzymes [BR:pfu01007] D PF0135 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PF1753 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PF0862 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PF0241 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PF1024 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PF1380 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PF1030 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PF1096 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PF0290 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PF0890 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PF0869 aspartyl tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D PF0155 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PF1951 partial asparaginyl-tRNA synthetase matches COOH terminus K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PF0264 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PF1627 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PF1204 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PF1293 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PF1351 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PF0270 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0086 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0185 partial alanyl-tRNA synthetase matches COOH terminus half K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0428 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0989 phenylalanyl-tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PF0990 phenylalanyl-tRNA synthetase beta-chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PF1497 putative transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PF1253 aspartate transaminase K10907 K10907; aminotransferase [EC:2.6.1.-] D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PF0265 2-amino-3-ketobutyrate CoA ligase (glycine acetyl transferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D PF1685 acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D PF1232 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF1421 hypothetical 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF0513 putative glutamate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PF0767 pleiotropic regulatory protein degT K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pfu03000] D PF0049 site-specific DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PF1295 transcription initiation factor TFIID (TATA-box factor) chain a (TATA sequence-binding protein) (tbp) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D PF1601 transcriptional regulatory protein, asnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D PF1543 transcriptional regulatory protein, asnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D PF0054 transcriptional regulatory protein, asnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PF1790 transcriptional regulatory protein arsR family K07721 K07721; ArsR family transcriptional regulator D PF0601 hypothetical protein K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator D PF0851 iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D PF1676 biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PF0077 biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PF0661 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D PF0496 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D PF0124 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D PF1743 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D PF0535 hypothetical protein K09714 tfx; HTH-type transcriptional regulator, fmd operon transcriptional regulator D PF0644 hypothetical protein K07725 csa3; CRISPR-associated protein Csa3 D PF1851 hypothetical protein K07728 K07728; putative transcriptional regulator D PF1386 hypothetical protein K07731 K07731; putative transcriptional regulator D PF0322 hypothetical protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D PF1338 transcriptional activator, putative K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 03021 Transcription machinery [BR:pfu03021] D PF1377 transcription initiation factor IIB chain b K03124 TFIIB; transcription initiation factor TFIIB D PF0687 transcription initiation factor IIB chain b homolog K03124 TFIIB; transcription initiation factor TFIIB D PF1295 transcription initiation factor TFIID (TATA-box factor) chain a (TATA sequence-binding protein) (tbp) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D PF0491 transcription initiation factor TFIIE K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D PF0933 DNA repair helicase rad3, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PF0255 DNA-directed RNA polymerase, subunit e'' K15171 SUPT4H1; transcription elongation factor SPT4 D PF1990 transcription antitermination protein nusG K15172 SUPT5H; transcription elongation factor SPT5 D PF0484 GTP binding protein K24104 GPN; GPN-loop GTPase D PF1560 transcription termination-antitermination factor nusa K02600 nusA; transcription termination/antitermination protein NusA D PF1563 DNA-directed RNA polymerase subunit a' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D PF1562 DNA-directed RNA polymerase subunit a K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D PF1564 DNA-directed RNA polymerase subunit b K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D PF1647 DNA-directed RNA polymerase subunit d K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D PF0256 DNA-directed RNA polymerase, subunit e' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D PF1036 hypothetical protein K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D PF1565 DNA-directed RNA polymerase subunit h K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D PF1642 DNA-directed RNA polymerase subunit k K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D PF0050 DNA-directed RNA polymerase subunit l K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D PF1643 DNA-directed RNA polymerase subunit n K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D PF2009 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D PF0986 DNA-directed RNA polymerase subunit m K03057 tfs; transcription factor S C 03019 Messenger RNA biogenesis [BR:pfu03019] D PF0255 DNA-directed RNA polymerase, subunit e'' K15171 SUPT4H1; transcription elongation factor SPT4 D PF1990 transcription antitermination protein nusG K15172 SUPT5H; transcription elongation factor SPT5 D PF1882 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase D PF0963 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase D PF1379 cell division protein pelota K06965 PELO; protein pelota D PF1593 peptide chain release factor eRF, subunit 1 K03265 ETF1; peptide chain release factor subunit 1 D PF1375 translation elongation factor eF-1, subunit alpha (tuf) K03231 EEF1A; elongation factor 1-alpha D PF0052 hypothetical protein K07573 CSL4; exosome complex component CSL4 D PF1569 hypothetical protein K03679 RRP4; exosome complex component RRP4 D PF1568 ribonuclease ph (rph) K11600 RRP41; exosome complex component RRP41 D PF1567 hypothetical protein K12589 RRP42; exosome complex component RRP42 D PF1101 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PF0053 putative ATP dependent RNA helicase K03725 K03725; putative ATP-dependent RNA helicase [EC:5.6.2.-] C 03041 Spliceosome C 03011 Ribosome [BR:pfu03011] D PF2054 SSU ribosomal protein S3AE K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D PF1812 SSU ribosomal protein S4E K02987 RP-S4e; small subunit ribosomal protein S4e D PF0488 SSU ribosomal protein S6E K02991 RP-S6e; small subunit ribosomal protein S6e D PF1069 SSU ribosomal protein S8E K02995 RP-S8e; small subunit ribosomal protein S8e D PF1491 SSU ribosomal protein S17E K02962 RP-S17e; small subunit ribosomal protein S17e D PF1499 SSU ribosomal protein S19E K02966 RP-S19e; small subunit ribosomal protein S19e D PF0253 SSU ribosomal protein S24E K02974 RP-S24e; small subunit ribosomal protein S24e D PF0218 SSU ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e D PF0252 SSU ribosomal protein S27AE K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PF1368 SSU ribosomal protein S28E K02979 RP-S28e; small subunit ribosomal protein S28e D PF1824 LSU ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e D PF1367 LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D PF1279 LSU ribosomal protein L10 K02866 RP-L10e; large subunit ribosomal protein L10e D PF0819 LSU ribosomal protein L14E K02875 RP-L14e; large subunit ribosomal protein L14e D PF0876 LSU ribosomal protein L15E K02877 RP-L15e; large subunit ribosomal protein L15e D PF1646 LSU ribosomal protein L18E K02883 RP-L18e; large subunit ribosomal protein L18e D PF1806 LSU ribosomal protein L19E K02885 RP-L19e; large subunit ribosomal protein L19e D PF1035 LSU ribosomal protein L21E K02889 RP-L21e; large subunit ribosomal protein L21e D PF1369 LSU ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e D PF1561 LSU ribosomal protein L30E K02908 RP-L30e; large subunit ribosomal protein L30e D PF0378 LSU ribosomal protein L31E K02910 RP-L31e; large subunit ribosomal protein L31e D PF1807 LSU ribosomal protein L32E K02912 RP-L32e; large subunit ribosomal protein L32e D PF0821 LSU ribosomal protein L34 K02915 RP-L34e; large subunit ribosomal protein L34e D PF1872 LSU ribosomal protein L35AE K02917 RP-L35Ae; large subunit ribosomal protein L35Ae D PF1541 LSU ribosomal protein L37E K02922 RP-L37e; large subunit ribosomal protein L37e D PF2008 LSU ribosomal protein L37AE K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D PF0379 LSU ribosomal protein L39E K02924 RP-L39e; large subunit ribosomal protein L39e D PF1475 LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D PF1018 LSU ribosomal protein L41E K02928 RP-L41e; large subunit ribosomal protein L41e D PF0217 LSU ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e D PF1640 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D PF1819 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D PF1649 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D PF1804 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D PF1558 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D PF1809 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D PF1644 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D PF1376 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D PF1648 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D PF1559 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D PF1650 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D PF1810 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D PF2056 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D PF1815 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D PF1821 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D PF1992 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D PF1822 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D PF1825 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D PF1811 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D PF1808 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D PF1993 LSU ribosomal protein L10E K02864 RP-L10; large subunit ribosomal protein L10 D PF1991 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D PF1645 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D PF1814 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D PF1802 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D PF1805 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D PF1820 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D PF1823 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D PF1813 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D PF1818 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D PF1803 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D PF1994 LSU ribosomal protein L12A K02869 RP-L12; large subunit ribosomal protein L12 D PF0376 LSU ribosomal protein LXA K02944 RP-LX; large subunit ribosomal protein LX D PF_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PF_r004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PF_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PF_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pfu03009] D PF0060 NOP5/NOP56 related protein K14564 NOP56; nucleolar protein 56 D PF1785 centromere binding protein homolog/pseudouridine synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D PF1141 hypothetical protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D PF2010 hypothetical protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D PF1262 hypothetical protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D PF1580 hypothetical protein K06961 KRR1; ribosomal RNA assembly protein D PF1581 rio1 protein, putative K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D PF0364 tyrosine-protein kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D PF1134 hypothetical protein K18532 AK6; adenylate kinase [EC:2.7.4.3] D PF0670 RNase l inhibitor K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D PF1495 GTP-binding protein, gtp1/obg family K06943 NOG1; nucleolar GTP-binding protein D PF1816 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D PF1378 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D PF1914 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D PF0112 hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] D PF0377 putative translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D PF1032 hypothetical protein K07562 NMD3; 60S ribosomal export protein NMD3 D PF1570 hypothetical protein K14574 SDO1; ribosome maturation protein SDO1 D PF1882 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase D PF0963 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase D PF1940 hypothetical protein K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D PF0397 GTP-binding protein homologue K03595 era; GTPase D PF0059 fibrillarin-like pre-rRNA processing protein K04795 flpA; fibrillarin-like pre-rRNA processing protein D PF1367 LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D PF1791 small nucleolar rnp gar1-like protein K07569 gar1; RNA-binding protein D PF1560 transcription termination-antitermination factor nusa K02600 nusA; transcription termination/antitermination protein NusA D PF1863 dimethyladenosine transferase (s-adenosylmethionine-6-n' K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D PF1265 putative nucleolar protein II (nol1-nop2-sun family) K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PF0251 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D PF0827 putative RNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D PF0267 ribosomal protein s18 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D PF0002 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D PF1177 GTP-binding protein, gtp1/obg family K03665 hflX; GTPase D PF0306 sua5 superfamily-related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PF1498 hypothetical protein K07574 yhbY; RNA-binding protein D PF0374 GTP-binding protein K06942 ychF; ribosome-binding ATPase D PF0022 putative RNase E K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-] C 03016 Transfer RNA biogenesis [BR:pfu03016] D PF1816 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D PF1378 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D PF1914 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D PF1613 hypothetical protein K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5] D PF1345 arylsulfatase, putative K00784 rnz; ribonuclease Z [EC:3.1.26.11] D PF1615 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D PF1552 hypothetical protein K24956 ZBTB8OS; protein archease D PF1375 translation elongation factor eF-1, subunit alpha (tuf) K03231 EEF1A; elongation factor 1-alpha D PF1753 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PF1293 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PF1096 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PF0890 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PF1030 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PF1380 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PF0869 aspartyl tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D PF0270 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0086 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0185 partial alanyl-tRNA synthetase matches COOH terminus half K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0428 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PF0155 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PF1951 partial asparaginyl-tRNA synthetase matches COOH terminus K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PF1627 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PF1351 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PF1204 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PF1024 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PF0290 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PF0264 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PF0989 phenylalanyl-tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PF0990 phenylalanyl-tRNA synthetase beta-chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PF0862 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PF0241 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PF1982 hypothetical protein K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D PF1912 hypothetical protein K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5] D PF1871 tRNA (guanine-26,n2-n2) methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D PF0089 met-10+ protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PF1415 met-10+ protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PF1896 l-isoaspartyl protein carboxyl methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D PF1718 hypothetical protein K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D PF0500 met-10+ protein K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114] D PF1098 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D PF2034 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D PF0918 putative tRNA pseudouridine synthase a K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D PF1555 hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D PF1139 hypothetical protein K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25] D PF0473 o-sialoglycoprotein endopeptidase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D PF0172 o-sialoglycoprotein endopeptidase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D PF1901 oxygen-independent coproporphyrinogen III oxidase K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] D PF0306 sua5 superfamily-related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PF1925 hypothetical protein K06963 TAN1; tRNA acetyltransferase TAN1 D PF1958 hypothetical protein K06963 TAN1; tRNA acetyltransferase TAN1 D PF_s004 RNase P RNA K01978 rnpB; M1 RNA D PF1880 mRNA 3'-end processing factor homolog K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5] D PF0026 tRNA nucleotidyltransferase (cca) K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] D PF0266 putative tRNA-intron endonuclease K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D PF0027 putative integral membrane transport protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D PF0083 hypothetical protein K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D PF0135 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PF1172 RNA methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D PF1403 hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257] D PF1257 putative nucleolar protein III (nol1-nop2-sun family) K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-] D PF0678 hypothetical protein K15566 trm10; tRNA (adenine9-N1/guanine9-N1)-methyltransferase [EC:2.1.1.218 2.1.1.221] D PF1002 hypothetical protein K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256] D PF0400 hypothetical protein K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] D PF0461 hypothetical protein K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] D PF1553 putative nucleolar protein I (nol1-nop2-sun family) K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-] D PF0273 n-type ATP pyrophosphatase superfamily K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D PF0523 hypothetical protein K09119 cgi121; KEOPS complex subunit Cgi121 D PF2011 hypothetical protein K09741 pcc1; KEOPS complex subunit Pcc1 D PF0048 succinoglycan biosynthesis regulator K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PF0219 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PF1277 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PF1046 queuine trna-ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D PF1288 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PF1487 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PF1835 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PF1855 putative transcription-associated protein TFIIS K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22] D PF0504 DNA helicase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] C 03012 Translation factors [BR:pfu03012] D PF1582 translation initiation factor eIF-1a K03236 EIF1A; translation initiation factor 1A D PF1817 protein translation factor sui1 homolog K03113 EIF1; translation initiation factor 1 D PF1140 translation initiation factor eIF-2, subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1 D PF0481 translation initiation factor eIF-2, subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D PF1717 translation initiation factor eIF-2, subunit gamma K03242 EIF2S3; translation initiation factor 2 subunit 3 D PF0475 translation initiation factor eIF-2b, subunit delta K03680 EIF2B4; translation initiation factor eIF-2B subunit delta D PF1264 translation initiation factor eIF-5a K03263 EIF5A; translation initiation factor 5A D PF1137 translation initiation factor IF-2 K03243 EIF5B; translation initiation factor 5B D PF0377 putative translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D PF1375 translation elongation factor eF-1, subunit alpha (tuf) K03231 EEF1A; elongation factor 1-alpha D PF1965 elongation factor 1-beta (EF-1-beta) K03232 EEF1B; elongation factor 1-beta D PF2012 elongation factor 2 (EF-2) K03234 EEF2; elongation factor 2 D PF1063 hypothetical protein K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108] D PF0828 n-type ATP pyrophosphatase superfamily K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14] D PF1593 peptide chain release factor eRF, subunit 1 K03265 ETF1; peptide chain release factor subunit 1 D PF1673 protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D PF1556 hypothetical protein K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] C 03110 Chaperones and folding catalysts [BR:pfu03110] D PF1974 thermosome, single subunit K22447 cct; archaeal chaperonin D PF1883 small heat shock protein K13993 HSP20; HSP20 family protein D PF0375 hypothetical protein K04797 pfdA; prefoldin alpha subunit D PF0382 hypothetical protein K04798 pfdB; prefoldin beta subunit D PF0615 hydrogenase expression/formation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D PF1401 peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] C 04131 Membrane trafficking [BR:pfu04131] D PF0931 nucleoside diphosphate kinase (ndk) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PF1882 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase D PF0963 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase D PF1989 protein transport protein sec61 gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D PF1188 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PF1375 translation elongation factor eF-1, subunit alpha (tuf) K03231 EEF1A; elongation factor 1-alpha C 04121 Ubiquitin system [BR:pfu04121] D PF1475 LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D PF0252 SSU ribosomal protein S27AE K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae C 03051 Proteasome [BR:pfu03051] D PF1571 proteasome, subunit alpha (multicatalytic endopeptidase complex alpha subunit) K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D PF0159 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PF1404 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PF0115 ATP-dependent 26S protease regulatory subunit K03420 psmR; proteasome regulatory subunit C 03032 DNA replication proteins [BR:pfu03032] D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D PF0049 site-specific DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PF1141 hypothetical protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D PF1785 centromere binding protein homolog/pseudouridine synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D PF1725 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D PF0017 origin recognition protein subunit 1 K10725 cdc6A; archaeal cell division control protein 6 D PF0482 cell division control protein 21 K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D PF0110 DNA primase, putative K02683 priS; DNA primase small subunit [EC:2.7.7.102] D PF0111 hypothetical protein K18882 priL; DNA primase large subunit D PF0982 hypothetical protein K09723 ginS; DNA replication factor GINS D PF0483 hypothetical protein K09723 ginS; DNA replication factor GINS D PF1781 RNaseH II K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PF0212 DNA-directed DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D PF0019 DNA polymerase II subunit 2 K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D PF0018 DNA polymerase II subunit 1 K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D PF0092 replication factor C, large subunit K04800 rfcL; replication factor C large subunit D PF0093 replication factor C, small subunit K04801 rfcS; replication factor C small subunit D PF1578 type II DNA topoisomerase subunit a K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] D PF1579 DNA topoisomerase VI, subunit b K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] D PF0494 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PF0495 reverse gyrase (rgy) K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:pfu03036] D PF0049 site-specific DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PF1826 hypothetical protein K09142 SPOUT1; methyltransferase [EC:2.1.1.-] D PF1722 archaeal histone a2 K24450 hmf; DNA-binding protein D PF1831 archaeal histone a1 K24450 hmf; DNA-binding protein D PF0054 transcriptional regulatory protein, asnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PF1843 chromosome segregation protein smc K03529 smc; chromosome segregation protein D PF1842 hypothetical protein K05896 scpA; segregation and condensation protein A D PF2021 hypothetical protein K06024 scpB; segregation and condensation protein B D PF1988 cell division protein ftsZ homolog K03531 ftsZ; cell division protein FtsZ D PF0525 cell division protein K03531 ftsZ; cell division protein FtsZ D PF1611 cell division inhibitor minD K03609 minD; septum site-determining protein MinD D PF0485 cell division inhibitor minD homolog K03609 minD; septum site-determining protein MinD D PF0526 soj homolog K03496 parA; chromosome partitioning protein D PF1868 integrase-recombinase protein K04763 xerD; integrase/recombinase XerD D PF0616 nucleotide-binding protein (mrp/nbp35 family) K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:pfu03400] D PF1878 methylated DNA protein cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D PF1229 glycosylase putative; mutY-nth family K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D PF0933 DNA repair helicase rad3, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PF1590 mutt putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PF1385 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PF0511 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D PF0258 putative endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D PF0987 hypothetical protein K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D PF2055 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PF0474 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D PF1167 smc-like protein K03546 sbcC; DNA repair protein SbcC/Rad50 D PF1166 exonuclease putative K03547 sbcD; DNA repair protein SbcD/Mre11 D PF1118 hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D PF1926 recombinase, radA K04483 radA; DNA repair protein RadA D PF0021 recombinase K04484 radB; DNA repair protein RadB D PF1503 hypothetical protein K03552 hjr; holliday junction resolvase [EC:3.1.21.10] D PF1165 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D PF1168 hypothetical protein K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-] D PF0677 helicase K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] D PF0494 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PF1051 large helicase-related protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D PF1504 large helicase-related protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D PF0440 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PF1892 hypothetical protein K22585 nreA; DNA repair protein NreA C 03029 Mitochondrial biogenesis [BR:pfu03029] D PF1816 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D PF1378 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D PF1914 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D PF0397 GTP-binding protein homologue K03595 era; GTPase D PF0862 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PF0890 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PF1627 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PF1380 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PF0616 nucleotide-binding protein (mrp/nbp35 family) K03593 mrp; ATP-binding protein involved in chromosome partitioning B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pfu02000] D PF1654 ABC transporter (ATP-binding protein)-like protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D PF1655 ABC transporter (ATP-binding protein)-like protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D PF0744 ABC transporter (msbA subfamily) K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D PF0080 hypothetical protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D PF0081 sulfate/thiosulfate transport protein homolog cyst K15496 wtpB; molybdate/tungstate transport system permease protein D PF0082 membrane protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D PF1518 thiamin-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein D PF1751 putative solute binding lipoprotein K02064 thiB; thiamine transport system substrate-binding protein D PF1520 ABC transporter integral membrane protein K02063 thiP; thiamine transport system permease protein D PF1748 putative sulfate transport system permease protein, ABC transporter K02063 thiP; thiamine transport system permease protein D PF1749 putative sulfate transport integral membrane protein K02063 thiP; thiamine transport system permease protein D PF1519 sugar-binding transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D PF1750 putative sugar-binding transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D PF1933 putative sugar transport ATP-hydrolyzing K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PF1744 trehalose/maltose transport ATP-hydrolyzing K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PF1970 putative multiple sugar-binding transport ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PF1938 putative sugar binding protein (malE-like) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D PF1937 putative sugar transport inner membrane protein (malf-like) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PF1936 putative sugar transport inner membrane protein (malg-like) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PF1739 trehalose/maltose binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D PF1740 trehalose/maltose transport inner membrane protein K10237 thuF; trehalose/maltose transport system permease protein D PF1741 trehalose/maltose transport inner membrane protein K10238 thuG; trehalose/maltose transport system permease protein D PF0119 putative perplasmic sugar binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein D PF0118 putative ABC transporter permease protein K17238 inoF; inositol-phosphate transport system permease protein D PF0117 putative sugar transport protein K17239 inoG; inositol-phosphate transport system permease protein D PF0116 putative multiple sugar transport protein K17240 inoK; inositol-phosphate transport system ATP-binding protein D PF1695 hypothetical lipoprotein K07335 bmpA; basic membrane protein A and related proteins D PF1697 putative ribose/galactose ABC transporter K23535 nupB; general nucleoside transport system permease protein D PF1698 putative ribose ABC transporter K23536 nupC; general nucleoside transport system permease protein D PF1696 putative ABC sugar transporter K23537 nupA; general nucleoside transport system ATP-binding protein D PF1967 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D PF1968 sugar transport membrane protein K02025 ABC.MS.P; multiple sugar transport system permease protein D PF1969 sugar ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D PF1003 phosphate-binding periplasmic protein precursor (pbp) K02040 pstS; phosphate transport system substrate-binding protein D PF1006 putative phosphate transport system permease protein C K02037 pstC; phosphate transport system permease protein D PF1007 phosphate transport system permease psta K02038 pstA; phosphate transport system permease protein D PF1008 putative ABC transport protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PF0357 dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PF1209 oligopeptide ABC transporter (oligopeptide-binding protein) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PF1408 putative dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PF0190 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PF0191 oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D PF0358 ABC transporter (oppbc family) K02033 ABC.PE.P; peptide/nickel transport system permease protein D PF1210 dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D PF1409 dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D PF1001 oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D PF0192 hypothetical oligopeptide transport system permease protein appc K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PF0359 oligopeptide ABC transport system permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PF1211 dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PF1410 dipeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PF1000 oligopeptide transport system permease protein appc K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PF0193 putative ABC transport ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PF0360 oligopeptide ABC transporter (ATP-binding protein) K02031 ddpD; peptide/nickel transport system ATP-binding protein D PF1212 putative peptide ABC uptake protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PF1411 dipeptide transport ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PF0194 dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D PF0361 oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein D PF1213 oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein D PF1412 dipeptide transport ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D PF0911 iron (III) ABC transporter, ATP-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PF0910 iron (III) ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D PF0909 ferric enterobactin transport ATP-binding protein homolog K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PF1774 iron (III) ABC transporter, ATP-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D PF0503 putative iron ABC transporter K25027 btuC; cobalamin transport system permease protein D PF0502 iron(III) dicitrate transport system permease protein fece K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D PF0530 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D PF0529 hypothetical protein K02008 cbiQ; cobalt/nickel transport system permease protein D PF0531 cobalamin biosynthesis protein m K02007 cbiM; cobalt/nickel transport system permease protein D PF0528 cobalt transport ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D PF1677 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D PF0067 cobalt transport ABC transporter, integral membrane component K16785 ecfT; energy-coupling factor transport system permease protein D PF1857 cobalt transport ATP-binding protein cbio K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PF0068 cobalt transport ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PF0373 putative ABC transporter, periplasmic binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D PF1780 putative ABC transporter (ATP-binding protein) K02075 ABC.ZM.P; zinc/manganese transport system permease protein D PF1779 putative ABC transporter (ATP-binding protein) K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D PF0579 hypothetical protein K16905 K16905; fluoroquinolone transport system permease protein D PF0578 hypothetical protein K16906 K16906; fluoroquinolone transport system permease protein D PF0577 ATP-binding transport protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-] D PF1247 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PF0922 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PF0883 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PF0278 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PF0834 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PF1252 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PF1012 putative ABC transporter (ATP-binding protein) K01992 ABC-2.P; ABC-2 type transport system permease protein D PF2061 putative ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D PF0309 ABC transporter (membrane protein) K01992 ABC-2.P; ABC-2 type transport system permease protein D PF0036 daunorubicin resistance membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PF0582 daunorubicin resistance membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PF1887 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PF1888 conserved membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PF0279 putative ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF1249 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0905 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF1468 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0921 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0895 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF1090 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0881 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0733 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0732 daunorubicin resistance ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0035 daunorubicin resistance ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0006 ABC transporter (ATP-binding) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0005 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0835 daunorubicin resistance ATP-binding protein drrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF1522 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF1467 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0310 daunorubicin resistance ATP-binding protein homolog drrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF0583 daunorubicin resistance ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF1011 daunorubicin resistance ATP-binding protein drrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF1889 daunorubicin resistance ATP-binding protein drrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PF1287 putative ABC transporter (ATP-binding protein) K09013 sufC; Fe-S cluster assembly ATP-binding protein D PF1850 damage-inducible protein (dinF homolog) K26939 norM; MATE family, multidrug efflux pump D PF0824 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D PF0823 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D PF0708 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D PF1157 hypothetical protein K07244 K07244; mgtE-like transporter D PF2036 magnesium and cobalt transporter K03284 corA; magnesium transporter D PF1235 hypothetical protein K06199 crcB; fluoride exporter D PF0558 cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D PF0746 hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family D PF0486 hypothetical protein K03298 TC.DME; drug/metabolite transporter, DME family D PF1671 hypothetical protein K03298 TC.DME; drug/metabolite transporter, DME family D PF0350 putative cation antiporter K07301 yrbG; cation:H+ antiporter D PF0275 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter D PF0268 Na+/H+ antiporter homolog K26730 napA; Na+:H+ antiporter D PF1603 hypothetical na antiporter K26730 napA; Na+:H+ antiporter D PF1164 putative Na+/H+ antiporter K26730 napA; Na+:H+ antiporter D PF1856 trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D PF0175 trk system potassium uptake protein a homolog K03499 trkA; trk/ktr system potassium uptake protein D PF0852 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D PF0552 arsenical-resistance protein acr3 K03325 ACR3; arsenite transporter D PF1450 hypothetical protein K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D PF1449 hypothetical protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D PF1428 hypothetical protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D PF1150 putative multisubunit Na+/H+ antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D PF1149 putative multisubunit Na+/H+ antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D PF1429 hypothetical protein K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D PF1148 putative multisubunit Na+/H+ antiporter K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D PF1448 hypothetical protein K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D PF1430 mbh8 NADH dehydrogenase subunit - integral membrane protein (like CooM) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D PF1147 putative multisubunit Na+/H+ antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D PF1453 hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D PF1423 hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D PF1153 putative multisubunit Na+/H+ antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D PF1452 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D PF1424 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D PF1152 putative multisubunit Na+/H+ antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D PF1451 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D PF1425 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D PF1151 putative multisubunit Na+/H+ antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D PF0449 hypothetical protein K24180 mleP; malate permease and related proteins D PF1325 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D PF0745 hypothetical protein K05595 marC; multiple antibiotic resistance protein D PF0130 hypothetical protein K05595 marC; multiple antibiotic resistance protein D PF0723 hypothetical protein K07243 FTR; high-affinity iron transporter D PF0674 ion gradient-generating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PF0671 methylmalonyl-CoAdecarboxylase, subunit alpha K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D PF0673 methylmalonyl-CoAdecarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D PF0672 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D PF0858 hypothetical protein K04758 feoA; ferrous iron transport protein A D PF0857 ferrous iron transport protein b K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:pfu02044] D PF0337 flagellin b2 precursor K07325 flaB; archaeal flagellin FlaB D PF0338 flagellin b2 precursor K07325 flaB; archaeal flagellin FlaB D PF0336 hypothetical protein K07822 flaC; archaeal flagellar protein FlaC D PF0335 flagella-related protein d, putative K07327 flaD; archaeal flagellar protein FlaD D PF0334 putative flagella-related protein K07329 flaF; archaeal flagellar protein FlaF D PF0333 putative flagella-related protein g K07330 flaG; archaeal flagellar protein FlaG D PF0332 putative flagella-related protein h K07331 flaH; archaeal flagellar protein FlaH D PF0331 putative type II secretion system protein K07332 flaI; archaeal flagellar protein FlaI D PF0994 type II secretion system protein K07332 flaI; archaeal flagellar protein FlaI D PF0330 flagella accessory protein K07333 flaJ; archaeal flagellar protein FlaJ D PF0993 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D PF0471 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D PF1598 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D PF0174 protein export membrane protein K03072 secD; preprotein translocase subunit SecD D PF0173 protein-export membrane protein K03074 secF; preprotein translocase subunit SecF D PF2017 hypothetical protein K22228 secG; preprotein translocase subunit SecG D PF1801 preprotein translocase K03076 secY; preprotein translocase subunit SecY D PF1731 signal recognition particle protein srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PF1766 signal recognition particle receptor (dpa) K03110 ftsY; fused signal recognition particle receptor D PF1989 protein transport protein sec61 gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D PF1894 hypothetical protein K03105 SRP19; signal recognition particle subunit SRP19 C 02042 Bacterial toxins C 02022 Two-component system C 02035 Bacterial motility proteins [BR:pfu02035] D PF0337 flagellin b2 precursor K07325 flaB; archaeal flagellin FlaB D PF0338 flagellin b2 precursor K07325 flaB; archaeal flagellin FlaB D PF0336 hypothetical protein K07822 flaC; archaeal flagellar protein FlaC D PF0335 flagella-related protein d, putative K07327 flaD; archaeal flagellar protein FlaD D PF0334 putative flagella-related protein K07329 flaF; archaeal flagellar protein FlaF D PF0333 putative flagella-related protein g K07330 flaG; archaeal flagellar protein FlaG D PF0332 putative flagella-related protein h K07331 flaH; archaeal flagellar protein FlaH D PF0331 putative type II secretion system protein K07332 flaI; archaeal flagellar protein FlaI D PF0994 type II secretion system protein K07332 flaI; archaeal flagellar protein FlaI D PF0330 flagella accessory protein K07333 flaJ; archaeal flagellar protein FlaJ D PF0993 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D PF0471 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pfu04812] D PF1638 hypothetical protein K06990 MEMO1; MEMO1 family protein D PF1988 cell division protein ftsZ homolog K03531 ftsZ; cell division protein FtsZ D PF0525 cell division protein K03531 ftsZ; cell division protein FtsZ D PF1507 cell division protein ftsZ homolog K22222 cetZ; tubulin-like protein CetZ D PF1611 cell division inhibitor minD K03609 minD; septum site-determining protein MinD D PF0485 cell division inhibitor minD homolog K03609 minD; septum site-determining protein MinD D PF0526 soj homolog K03496 parA; chromosome partitioning protein C 04147 Exosome [BR:pfu04147] D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PF1057 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PF1188 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PF1033 alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D PF1375 translation elongation factor eF-1, subunit alpha (tuf) K03231 EEF1A; elongation factor 1-alpha D PF2012 elongation factor 2 (EF-2) K03234 EEF2; elongation factor 2 D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PF0285 inosine-5'-monophosphate dehydrogenase (imp dehydrogenase) K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PF0252 SSU ribosomal protein S27AE K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PF1882 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase D PF0963 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PF0343 s-adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PF1800 adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3] D PF1045 adenylate kinase (adk) K00939 adk; adenylate kinase [EC:2.7.4.3] D PF0208 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PF0207 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PF0445 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D PF2004 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PF1004 alkaline phosphatase IV precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PF1394 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PF1602 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PF1920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:pfu02048] D PF1118 hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D PF1117 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 D PF1120 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D PF0640 ATP-dependent RNA helicase, putative K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D PF0639 hypothetical protein K07475 cas3; CRISPR-associated endonuclease Cas3-HD [EC:3.1.-.-] D PF0644 hypothetical protein K07725 csa3; CRISPR-associated protein Csa3 D PF0637 hypothetical protein K19086 csa4; CRISPR-associated protein Csa4 D PF0638 hypothetical protein K19086 csa4; CRISPR-associated protein Csa4 D PF0643 hypothetical protein K19087 csa5; CRISPR-associated protein Csa5 D PF1123 hypothetical protein K19088 cst1; CRISPR-associated protein Cst1 D PF0642 hypothetical protein K19075 cst2; CRISPR-associated protein Cst2 D PF1122 hypothetical protein K19075 cst2; CRISPR-associated protein Cst2 D PF1119 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D PF1793 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D PF0641 hypothetical protein K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c D PF1121 hypothetical protein K19090 cas5t; CRISPR-associated protein Cas5t D PF0393 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D PF1131 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D PF1130 hypothetical protein K07061 cmr1; CRISPR-associated protein Cmr1 D PF0352 hypothetical protein K07061 cmr1; CRISPR-associated protein Cmr1 D PF1129 hypothetical protein K19076 cmr2; CRISPR-associated protein Cmr2 D PF1128 hypothetical protein K09127 cmr3; CRISPR-associated protein Cmr3 D PF1126 hypothetical protein K09000 cmr4; CRISPR-associated protein Cmr4 D PF1125 hypothetical protein K19141 cmr5; CRISPR-associated protein Cmr5 D PF1124 hypothetical protein K19142 cmr6; CRISPR-associated protein Cmr6 D PF1127 hypothetical protein K19143 csx1; CRISPR-associated protein Csx1 D PF0049 site-specific DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PF1988 cell division protein ftsZ homolog K03531 ftsZ; cell division protein FtsZ D PF0525 cell division protein K03531 ftsZ; cell division protein FtsZ D PF1753 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PF1205 hypothetical protein K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pfu00537] D PF1004 alkaline phosphatase IV precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pfu03100] D PF_t018 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PF_t020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PF_t003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PF_t004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PF_t017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PF_t045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PF_t009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PF_t013 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PF_t027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PF_t041 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PF_t031 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PF_t008 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PF_t011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PF_t006 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PF_t015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PF_t001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PF_t024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PF_t010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PF_t046 tRNA-His K14226 tRNA-His; tRNA His D PF_t016 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PF_t034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PF_t007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PF_t019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PF_t039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PF_t025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PF_t030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PF_t012 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PF_t026 tRNA-Met K14230 tRNA-Met; tRNA Met D PF_t005 tRNA-Met K14230 tRNA-Met; tRNA Met D PF_t029 tRNA-Met K14230 tRNA-Met; tRNA Met D PF_t002 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PF_t038 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PF_t036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PF_t044 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PF_t028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PF_t014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PF_t032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PF_t040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PF_t035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PF_t033 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PF_t037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PF_t022 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D PF_t023 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PF_t042 tRNA-Val K14237 tRNA-Val; tRNA Val D PF_t021 tRNA-Val K14237 tRNA-Val; tRNA Val D PF_t043 tRNA-Val K14237 tRNA-Val; tRNA Val D PF_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PF_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PF_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PF_r004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PF_s002 signal recognition particle; structural RNA K01983 ffs; SRP RNA D PF_s004 RNase P RNA K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D PF0766 putative dehydrogenase K18855 E1.1.1.374; UDP-N-acetylglucosamine 3-dehydrogenase [EC:1.1.1.374] D PF0533 indolepyruvate ferredoxin oxidoreductase subunit a K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D PF0845 2-keto acid:ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D PF0139 2-keto acid:ferredoxin oxidoreductase subunit gamma K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D PF0534 indolepyruvate ferredoxin oxidoreductase subunit b K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D PF1532 NADH oxidase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3] D PF1186 NADH oxidase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18] D PF1327 glutamate synthase [NADPH] small chain K20202 sudA; sulfide dehydrogenase subunit alpha [EC:1.8.1.19] D PF1328 hydrogenase subunit gamma K20203 sudB; sulfide dehydrogenase subunit beta [EC:1.8.1.19] D PF0722 alkyl hydroperoxide reductase subunit c K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D PF1434 mbh12 membrane bound hydrogenase alpha (NADH dehydrogenase) K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2] D PF1433 mbh11 membrane bound hydrogenase beta (NADH dehydrogenase) K18017 mbhK; membrane-bound hydrogenase subunit beta [EC:1.12.7.2] D PF1432 mbh10 NADH dehydrogenase subunit (like cCoL, EchC, HycH) K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2] D PF1281 superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2] D PF0742 putative ferritin homolog K02217 ftnA; ferritin [EC:1.16.3.2] D PF1911 putative hydrogenase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D PF0553 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D PF1454 hypothetical protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D PF1972 hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PF0631 hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PF1397 hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PF1049 hypothetical protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PF1922 l-isoaspartyl protein carboxyl methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D PF0595 hydrogenase expression/formation protein K20215 dph5; diphthine synthase [EC:2.1.1.98] D PF1132 putative carbamoyl transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D PF1916 hypothetical protein K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268] D PF0292 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D PF1111 hypothetical protein K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128] D PF0071 hypothetical protein K07557 tgtA2; archaeosine synthase alpha-subunit [EC:2.6.1.97 2.6.1.-] D PF2033 hypothetical protein K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-] D PF0078 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16] D PF0866 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D PF0462 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39] D PF1587 hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D PF0859 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PF1298 putative endonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D PF0012 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D PF0354 hypothetical protein K22408 dac; N,N'-diacetylchitobiose non-reducing end deacetylase [EC:3.5.1.136] D PF0668 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D PF0517 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PF0804 methanol dehydrogenase regulator K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PF0418 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PF0405 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PF0459 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D PF0200 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D PF0904 hypothetical protein K01741 E4.2.99.18; DNA-(apurinic or apyrimidinic site) lyase [EC:4.2.99.18] D PF1549 RNA-3'-phosphate cyclase K18105 rtcA; RNA 3'-terminal phosphate cyclase (GTP) [EC:6.5.1.5] D PF0079 cyclic 2,3-diphospoglycerate-synthetase K05716 CPGS; cyclic 2,3-diphosphoglycerate synthase [EC:6.5.1.9] D PF0353 hypothetical protein K07468 K07468; DNA/RNA ligase [EC:6.5.1.-] C 99981 Carbohydrate metabolism D PF1198 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D PF1909 ferredoxin K05337 fer; ferredoxin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism D PF0170 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D PF1954 hypothetical protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D PF0512 hypothetical protein K03627 MBF1; putative transcription factor D PF1881 hypothetical protein K03622 ssh10b; archaea-specific DNA-binding protein D PF1542 small nuclear ribonucleoprotein, putative K04796 RUXX; small nuclear ribonucleoprotein D PF0610 hypothetical protein K07743 K07743; transcriptional regulator D PF1932 hypothetical protein K07745 K07745; transcriptional regulator C 99974 Translation D PF1862 DNA-binding protein K07572 K07572; putative nucleotide binding protein D PF0596 hypothetical protein K07577 K07577; putative mRNA 3-end processing factor D PF0537 hypothetical protein K07578 K07578; homologs of the eukaryotic argonaute protein D PF0211 hypothetical protein K07579 K07579; putative methylase D PF1964 hypothetical protein K07580 K07580; Zn-ribbon RNA-binding protein D PF1913 hypothetical protein K07581 K07581; RNA-binding protein D PF1945 n-type ATP pyrophosphatase superfamily K07585 K07585; tRNA methyltransferase C 99975 Protein processing D PF0548 hydrogenase expression/formation protein K04653 hypC; hydrogenase expression/formation protein HypC D PF0549 hydrogenase expression/formation protein K04654 hypD; hydrogenase expression/formation protein HypD D PF0604 hydrogenase expression/formation protein K04655 hypE; hydrogenase expression/formation protein HypE D PF0559 hydrogenase expression/formation regulatory protein K04656 hypF; hydrogenase maturation protein HypF D PF1388 hypothetical protein K07397 yhfA; putative redox protein D PF1533 nodulation protein nfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D PF0567 hypothetical protein K07445 K07445; putative DNA methylase D PF2023 DNA invertase K07450 K07450; putative resolvase D PF0399 member of s1p family of ribosomal proteins K07463 K07463; archaea-specific RecJ-like exonuclease D PF1847 tbp-interacting protein tip49 K07472 TIP49; TBP-interacting protein D PF0985 hypothetical protein K07477 K07477; translin D PF0286 hypothetical protein K07500 K07500; DNA endonuclease D PF1918 hypothetical protein K07496 K07496; putative transposase D PF2024 transposase K07496 K07496; putative transposase D PF0760 hypothetical protein K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D PF0685 hypothetical protein K07504 K07504; predicted type IV restriction endonuclease B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D PF1020 putative phosphate transport protein pitb K03306 TC.PIT; inorganic phosphate transporter, PiT family D PF1178 putative na-dependant transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D PF0429 putative proline permease K03307 TC.SSS; solute:Na+ symporter, SSS family D PF0371 putative transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D PF0514 d-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth D PF1633 hypothetical protein K06384 spoIIM; stage II sporulation protein M C 99993 Cell motility C 99995 Signaling proteins D PF1473 hypothetical protein K07176 K07176; putative serine/threonine protein kinase D PF0625 hypothetical protein K08482 kaiC; circadian clock protein KaiC D PF1087 hypothetical protein K06875 PDCD5; programmed cell death protein 5 C 99992 Structural proteins C 99994 Others D PF1010 phosphate ABC transporter, regulatory protein K02039 phoU; phosphate transport system protein D PF1009 hypothetical protein K02039 phoU; phosphate transport system protein D PF1031 divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D PF1490 hypothetical protein K04477 ycdX; putative hydrolase D PF1041 hypothetical protein K06865 K06865; ATPase D PF1060 hypothetical protein K06874 K06874; zinc finger protein D PF0592 ATP-dependent RNA helicase, putative K06877 K06877; DEAD/DEAH box helicase domain-containing protein D PF1667 partial methionyl-tRNA synthetase - matches COOH terminus K06878 K06878; tRNA-binding protein D PF1777 hydrolase related to 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily D PF0222 hydrolase related to 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily D PF1161 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D PF1286 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB D PF0129 hypothetical protein K07038 K07038; inner membrane protein D PF0908 hypothetical protein K07049 K07049; TatD-related deoxyribonuclease D PF0498 hypothetical protein K07143 K07143; UPF0148 protein D PF0106 hypothetical protein K08971 K08971; putative membrane protein D PF0260 hypothetical protein K08975 K08975; putative membrane protein D PF0737 hypothetical protein K08982 K08982; putative membrane protein C 99997 Function unknown D PF0015 hypothetical protein K06869 K06869; uncharacterized protein D PF1438 hypothetical protein K06870 K06870; uncharacterized protein D PF2064 arylsulfatase regulatory protein, putative K06871 K06871; uncharacterized protein D PF1829 nucleotidyltransferase K06885 K06885; uncharacterized protein D PF0635 DEXX-box atpase K06921 K06921; uncharacterized protein D PF0435 DEXX-box atpase K06921 K06921; uncharacterized protein D PF0304 DEXX-box atpase K06921 K06921; uncharacterized protein D PF1097 hypothetical protein K06921 K06921; uncharacterized protein D PF0634 DEXX-box atpase K06921 K06921; uncharacterized protein D PF0764 DEXX-box atpase K06921 K06921; uncharacterized protein D PF0566 hypothetical protein K06922 K06922; uncharacterized protein D PF0725 hypothetical protein K06929 K06929; uncharacterized protein D PF0620 hypothetical protein K06933 K06933; uncharacterized protein D PF0619 hypothetical protein K06934 K06934; uncharacterized protein D PF1628 hypothetical protein K06935 K06935; uncharacterized protein D PF1733 hypothetical protein K06940 K06940; uncharacterized protein D PF1898 hypothetical protein K06940 K06940; uncharacterized protein D PF0224 hypothetical protein K06950 K06950; uncharacterized protein D PF1019 hypothetical protein K06953 K06953; uncharacterized protein D PF1484 hypothetical protein K06953 K06953; uncharacterized protein D PF0860 btpA family protein K06971 K06971; uncharacterized protein D PF0875 hypothetical protein K06983 K06983; uncharacterized protein D PF0262 mfs transporter K07003 K07003; uncharacterized protein D PF1043 hypothetical protein K07013 K07013; uncharacterized protein D PF0593 hypothetical protein K07022 K07022; uncharacterized protein D PF1285 hypothetical protein K07033 K07033; uncharacterized protein D PF1405 cleavage and polyadenylation specifity factor protein K07041 K07041; uncharacterized protein D PF0042 metal-dependent hydrolase K07045 K07045; uncharacterized protein D PF0812 hypothetical protein K07064 K07064; uncharacterized protein D PF0574 hypothetical protein K07064 K07064; uncharacterized protein D PF0575 hypothetical protein K07064 K07064; uncharacterized protein D PF0974 hypothetical protein K07068 K07068; uncharacterized protein D PF1981 hypothetical protein K07073 K07073; uncharacterized protein D PF0906 hypothetical protein K07087 K07087; uncharacterized protein D PF0368 hypothetical protein K07090 K07090; uncharacterized protein D PF1075 hypothetical protein K07090 K07090; uncharacterized protein D PF1792 5'-cyclic-nucleotide phosphodiesterase cpda homolog K07095 K07095; uncharacterized protein D PF1550 hypothetical protein K07095 K07095; uncharacterized protein D PF0282 hypothetical protein K07096 K07096; uncharacterized protein D PF1950 xanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein D PF0039 xanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein D PF1572 hypothetical protein K07103 K07103; uncharacterized protein D PF0284 hypothetical protein K07103 K07103; uncharacterized protein D PF0691 hypothetical protein K07108 K07108; uncharacterized protein D PF0978 hypothetical protein K07111 K07111; uncharacterized protein D PF1496 hypothetical protein K07111 K07111; uncharacterized protein D PF1238 putative ABC transporter (ATP-binding protein) K07128 K07128; uncharacterized protein D PF0850 hypothetical protein K07129 K07129; uncharacterized protein D PF0585 DEXX-box atpase K07133 K07133; uncharacterized protein D PF1321 DEXX-box atpase K07133 K07133; uncharacterized protein D PF0652 DEXX-box atpase K07133 K07133; uncharacterized protein D PF0243 DEXX-box atpase K07133 K07133; uncharacterized protein D PF0214 n-type ATP pyrophosphatase K07134 K07134; uncharacterized protein D PF0386 hypothetical protein K07135 K07135; uncharacterized protein D PF0276 oxidoreductase K07137 K07137; uncharacterized protein D PF1716 hypothetical protein K07158 K07158; uncharacterized protein D PF0927 hypothetical protein K07158 K07158; uncharacterized protein D PF1142 hypothetical protein K07159 K07159; uncharacterized protein D PF0611 hypothetical protein K09003 K09003; uncharacterized protein D PF1050 hypothetical protein K09005 K09005; uncharacterized protein D PF2042 hypothetical protein K09120 K09120; uncharacterized protein D PF0603 hypothetical protein K09122 K09122; uncharacterized protein D PF0248 hypothetical protein K09129 K09129; uncharacterized protein D PF1488 hypothetical protein K09130 K09130; uncharacterized protein D PF1765 hypothetical protein K09131 K09131; uncharacterized protein D PF0014 hypothetical protein K09135 K09135; uncharacterized protein D PF1236 hypothetical protein K09137 K09137; uncharacterized protein D PF0133 hypothetical protein K09139 K09139; uncharacterized protein D PF1979 hypothetical protein K09141 K09141; uncharacterized protein D PF1626 hypothetical protein K09145 K09145; uncharacterized protein D PF1275 hypothetical protein K09148 K09148; uncharacterized protein D PF0413 hypothetical protein K09149 K09149; uncharacterized protein D PF0493 hypothetical protein K09150 K09150; uncharacterized protein D PF1828 hypothetical protein K09152 K09152; uncharacterized protein D PF1501 hypothetical protein K09154 K09154; uncharacterized protein D PF0695 hypothetical protein K09155 K09155; uncharacterized protein D PF0920 nucleotidyltransferase K09163 K09163; uncharacterized protein D PF0123 putative methyltransferase K09713 K09713; uncharacterized protein D PF1300 hypothetical protein K09715 K09715; uncharacterized protein D PF1418 hypothetical protein K09719 K09719; uncharacterized protein D PF0239 hypothetical protein K09721 K09721; uncharacterized protein D PF1577 hypothetical protein K09724 K09724; uncharacterized protein D PF0315 hypothetical protein K09725 K09725; uncharacterized protein D PF1632 hypothetical protein K09726 K09726; uncharacterized protein D PF1625 hypothetical protein K09727 K09727; uncharacterized protein D PF1485 hypothetical protein K09728 K09728; uncharacterized protein D PF1381 hypothetical protein K09730 K09730; uncharacterized protein D PF1486 hypothetical protein K09731 K09731; uncharacterized protein D PF0231 hypothetical protein K09732 K09732; uncharacterized protein D PF1297 hypothetical protein K09736 K09736; uncharacterized protein D PF0452 hypothetical protein K09737 K09737; uncharacterized protein D PF1086 hypothetical protein K09738 K09738; uncharacterized protein D PF0051 hypothetical protein K09742 K09742; uncharacterized protein D PF1903 putative translation initiation factor (IF-2 homolog) K09744 K09744; uncharacterized protein D PF0340 putative HTH transcription regulator K09745 K09745; uncharacterized protein D PF2018 hypothetical protein K09746 K09746; uncharacterized protein D PF1395 hypothetical protein K07220 K07220; uncharacterized protein D PF1021 hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 11, 2024