+D GENES KO
#
KEGG Orthology (KO) - Prochlorococcus marinus MIT 9312
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pmi00010]
D PMT9312_0596 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PMT9312_0910 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMT9312_0775 D-fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PMT9312_0789 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMT9312_0971 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMT9312_0023 glyceraldehyde 3-phosphate dehydrogenase (NADP+) K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D PMT9312_0197 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PMT9312_1527 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PMT9312_0210 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMT9312_0888 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMT9312_1384 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PMT9312_0869 pyruvate dehydrogenase E1 beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PMT9312_0400 dihydrolipoamide acetyltransferase component (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMT9312_1394 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMT9312_0619 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMT9312_0079 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:pmi00020]
D PMT9312_0163 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PMT9312_1793 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMT9312_1688 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PMT9312_1394 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMT9312_1354 Succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMT9312_1559 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PMT9312_0415 Malate dehydrogenase (acceptor) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PMT9312_1384 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PMT9312_0869 pyruvate dehydrogenase E1 beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PMT9312_0400 dihydrolipoamide acetyltransferase component (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pmi00030]
D PMT9312_0910 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMT9312_1085 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMT9312_0779 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PMT9312_0778 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PMT9312_0774 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMT9312_1703 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMT9312_0519 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PMT9312_1582 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PMT9312_0395 putative deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PMT9312_1055 PfkB family carbohydrate kinase-like protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D PMT9312_0079 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMT9312_1091 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PMT9312_0227 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMT9312_0789 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMT9312_0775 D-fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:pmi00040]
D PMT9312_1312 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMT9312_1348 conserved hypothetical protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D PMT9312_0774 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMT9312_0316 carbohydrate kinase, FGGY family K22935 XK1; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:pmi00051]
D PMT9312_1720 putative carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PMT9312_1329 mannose-6-phosphate isomerase, type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PMT9312_0154 putative sugar-phosphate nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PMT9312_1335 histidinol-phosphate phosphatase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PMT9312_1316 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PMT9312_1315 NAD dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PMT9312_0839 HAD-superfamily hydrolase YedP K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D PMT9312_0775 D-fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PMT9312_0789 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMT9312_0971 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:pmi00052]
D PMT9312_1317 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMT9312_1334 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMT9312_0079 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMT9312_0596 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00053 Ascorbate and aldarate metabolism [PATH:pmi00053]
D PMT9312_1312 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMT9312_1313 putative nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PMT9312_1348 conserved hypothetical protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:pmi00500]
D PMT9312_1803 Sucrose-phosphate synthase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14]
D PMT9312_0838 Alpha amylase, catalytic subdomain K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D PMT9312_0777 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PMT9312_0609 Glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D PMT9312_0584 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PMT9312_1076 (1->4)-alpha-D-glucan branching enzyme K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PMT9312_1693 Glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PMT9312_1092 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PMT9312_1420 isoamylase K01214 ISA; isoamylase [EC:3.2.1.68]
D PMT9312_0079 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMT9312_0596 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PMT9312_0910 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMT9312_1720 putative carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pmi00520]
D PMT9312_1720 putative carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PMT9312_1699 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMT9312_0243 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PMT9312_0611 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PMT9312_1396 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMT9312_0021 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMT9312_1346 N-acetylneuraminate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D PMT9312_1299 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D PMT9312_1300 WblB protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D PMT9312_1304 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D PMT9312_1298 putative acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D PMT9312_0596 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PMT9312_0079 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMT9312_1312 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMT9312_1757 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D PMT9312_1317 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMT9312_1334 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMT9312_1313 putative nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PMT9312_0910 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMT9312_1329 mannose-6-phosphate isomerase, type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PMT9312_0154 putative sugar-phosphate nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PMT9312_1335 histidinol-phosphate phosphatase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PMT9312_1316 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PMT9312_1315 NAD dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PMT9312_0777 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:pmi00620]
D PMT9312_0619 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMT9312_1384 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PMT9312_0869 pyruvate dehydrogenase E1 beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PMT9312_0400 dihydrolipoamide acetyltransferase component (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMT9312_1394 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMT9312_0888 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMT9312_0534 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMT9312_0027 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMT9312_0062 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMT9312_0792 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMT9312_0652 Glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PMT9312_0559 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PMT9312_0415 Malate dehydrogenase (acceptor) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PMT9312_1559 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PMT9312_1667 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PMT9312_1077 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pmi00630]
D PMT9312_0619 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMT9312_0163 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PMT9312_1793 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMT9312_0550 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D PMT9312_0551 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D PMT9312_0881 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PMT9312_1604 glutamate synthase (ferredoxin) K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D PMT9312_0880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMT9312_0260 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMT9312_1760 glycine dehydrogenase (decarboxylating) beta subunit / glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PMT9312_1780 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMT9312_1394 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMT9312_1761 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PMT9312_0840 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D PMT9312_0227 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMT9312_1795 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pmi00640]
D PMT9312_0619 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMT9312_1394 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMT9312_0534 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMT9312_0027 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMT9312_0062 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMT9312_0792 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMT9312_1793 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:pmi00650]
D PMT9312_1354 Succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMT9312_0526 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMT9312_1253 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pmi00660]
D PMT9312_0526 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMT9312_1253 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMT9312_0258 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PMT9312_0257 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PMT9312_0794 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pmi00562]
D PMT9312_0100 inositol monophosphate family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PMT9312_0901 myo-inositol-1(or 4)-monophosphatase-like protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PMT9312_0971 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pmi00190]
D PMT9312_0162 NADH dehydrogenase subunit H K05572 ndhA; NAD(P)H-quinone oxidoreductase subunit 1 [EC:7.1.1.2]
D PMT9312_0434 NADH dehydrogenase subunit N K05573 ndhB; NAD(P)H-quinone oxidoreductase subunit 2 [EC:7.1.1.2]
D PMT9312_0296 NADH dehydrogenase subunit A K05574 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 [EC:7.1.1.2]
D PMT9312_0594 NADH dehydrogenase subunit M K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D PMT9312_0152 NADH dehydrogenase subunit M K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2]
D PMT9312_0159 NADH dehydrogenase subunit K K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D PMT9312_0151 NADH dehydrogenase subunit L K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2]
D PMT9312_0160 NADH dehydrogenase subunit J K05578 ndhG; NAD(P)H-quinone oxidoreductase subunit 6 [EC:7.1.1.2]
D PMT9312_0174 NADH dehydrogenase subunit D K05579 ndhH; NAD(P)H-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PMT9312_0161 NADH-plastoquinone oxidoreductase, I subunit K05580 ndhI; NAD(P)H-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PMT9312_0294 NADH dehydrogenase subunit C K05581 ndhJ; NAD(P)H-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PMT9312_0295 NADH dehydrogenase subunit B K05582 ndhK; NAD(P)H-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PMT9312_0570 NADH dehydrogenase subunit NdhL (ndhL) K05583 ndhL; NAD(P)H-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PMT9312_0147 NADH dehydrogenase I subunit M K05584 ndhM; NAD(P)H-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PMT9312_1651 NADH dehydrogenase I subunit N K05585 ndhN; NAD(P)H-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PMT9312_1354 Succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMT9312_0447 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PMT9312_0443 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PMT9312_0444 Cytochrome-c oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PMT9312_0445 putative cytochrome c oxidase, subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D PMT9312_0446 cytochrome c oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PMT9312_1544 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PMT9312_1531 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PMT9312_1543 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PMT9312_1545 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PMT9312_1532 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PMT9312_1549 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMT9312_1546 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMT9312_1547 ATP synthase F0 subcomplex B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMT9312_1548 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PMT9312_0495 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PMT9312_0512 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PMT9312_1789 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis [PATH:pmi00195]
D PMT9312_0225 photosystem q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D PMT9312_1144 photosystem q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D PMT9312_0321 photosystem II PsbB protein (CP47) K02704 psbB; photosystem II CP47 chlorophyll apoprotein
D PMT9312_1257 photosystem II 44 kDa subunit reaction center protein K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D PMT9312_1256 photosystem II D2 protein (photosystem q(a) protein) K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D PMT9312_0299 cytochrome b559, alpha subunit K02707 psbE; photosystem II cytochrome b559 subunit alpha
D PMT9312_1176 PsbF protein-like protein K02708 psbF; photosystem II cytochrome b559 subunit beta
D PMT9312_0300 cytochrome b559, beta subunit K02708 psbF; photosystem II cytochrome b559 subunit beta
D PMT9312_0253 photosystem II PsbH protein K02709 psbH; photosystem II PsbH protein
D PMT9312_0255 photosystem II reaction center PsbI protein K02710 psbI; photosystem II PsbI protein
D PMT9312_0302 photosytem II PsbJ protein K02711 psbJ; photosystem II PsbJ protein
D PMT9312_0274 photosystem II protein PsbK K02712 psbK; photosystem II PsbK protein
D PMT9312_0301 photosystem II PsbL protein K02713 psbL; photosystem II PsbL protein
D PMT9312_0323 photosystem II reaction center M protein (PsbM)-like protein K02714 psbM; photosystem II PsbM protein
D PMT9312_0230 photosystem II manganese-stabilizing protein K02716 psbO; photosystem II oxygen-evolving enhancer protein 1
D PMT9312_1109 photosystem II oxygen evolving complex protein PsbP K02717 psbP; photosystem II oxygen-evolving enhancer protein 2
D PMT9312_0320 photosystem II PsbT protein K02718 psbT; photosystem II PsbT protein
D PMT9312_0064 hypothetical protein K02722 psbX; photosystem II PsbX protein
D PMT9312_1128 photosystem II reaction center Y protein (PsbY)-like protein K02723 psbY; photosystem II PsbY protein
D PMT9312_1736 putative photosystem II PsbZ protein K02724 psbZ; photosystem II PsbZ protein
D PMT9312_0508 photosystem II reaction center Psb27 protein-like protein K08902 psb27; photosystem II Psb27 protein
D PMT9312_0874 photosystem II reaction center Psb28 protein-like protein K08903 psb28; photosystem II 13kDa protein
D PMT9312_1616 photosystem I core protein PsaA K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12]
D PMT9312_1615 photosystem I core protein PsaB K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12]
D PMT9312_1700 photosystem I subunit PsaC K02691 psaC; photosystem I iron-sulfur center [EC:1.97.1.12]
D PMT9312_1670 photosystem I protein PsaD K02692 psaD; photosystem I subunit II
D PMT9312_0335 photosystem I PsaE protein (subunit IV) K02693 psaE; photosystem I subunit IV
D PMT9312_0469 photosystem I PsaF protein (subunit III) K02694 psaF; photosystem I subunit III
D PMT9312_1612 photosystem I subunit VIII (PsaI) K02696 psaI; photosystem I subunit VIII
D PMT9312_0468 photosystem I PsaJ protein (subunit IX) K02697 psaJ; photosystem I subunit IX
D PMT9312_0894 photosystem I PsaK protein (subunit X) K02698 psaK; photosystem I subunit X
D PMT9312_1611 photosystem I PsaL protein (subunit XI) K02699 psaL; photosystem I subunit XI
D PMT9312_0540 photosystem I reaction center subunit XII (PsaM)-like protein K02700 psaM; photosystem I subunit XII
D PMT9312_0461 cytochrome F K02634 petA; apocytochrome f
D PMT9312_0331 cytochrome b6 K02635 petB; cytochrome b6
D PMT9312_0462 Twin-arginine translocation pathway signal K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D PMT9312_0332 petD protein (subunit IV of the Cytochrome b6f complex) K02637 petD; cytochrome b6-f complex subunit 4
D PMT9312_1069 cytochrome b6/f complex, subunit V K02640 petG; cytochrome b6-f complex subunit 5
D PMT9312_1251 cytochrome b6-F complex subunit VII K02643 petM; cytochrome b6-f complex subunit 7
D PMT9312_0748 cytochrome b6-f complex subunit VIII K03689 petN; cytochrome b6-f complex subunit 8
D PMT9312_0581 plastocyanin K02638 petE; plastocyanin
D PMT9312_1542 Ferredoxin (2Fe-2S) K02639 petF; ferredoxin
D PMT9312_0902 ferredoxin, petF-like protein K02639 petF; ferredoxin
D PMT9312_1450 Ferredoxin (2Fe-2S) K02639 petF; ferredoxin
D PMT9312_1086 ferredoxin-NADP oxidoreductase (FNR) K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2]
D PMT9312_0716 cytochrome c K08906 petJ; cytochrome c6
D PMT9312_1532 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PMT9312_1531 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PMT9312_1543 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PMT9312_1544 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PMT9312_1545 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PMT9312_1546 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMT9312_1547 ATP synthase F0 subcomplex B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMT9312_1548 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PMT9312_1549 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
C 00196 Photosynthesis - antenna proteins [PATH:pmi00196]
D PMT9312_0307 phycobilisome protein K05377 cpeB; phycoerythrin beta chain
D PMT9312_0308 phycoerythrin linker protein CpeS-like protein K05382 cpeS; phycoerythrin-associated linker protein
C 00710 Carbon fixation in photosynthetic organisms [PATH:pmi00710]
D PMT9312_0550 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D PMT9312_0551 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D PMT9312_0197 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PMT9312_0023 glyceraldehyde 3-phosphate dehydrogenase (NADP+) K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D PMT9312_0789 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMT9312_0775 D-fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PMT9312_1703 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMT9312_1582 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PMT9312_0793 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D PMT9312_0971 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMT9312_0774 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMT9312_1667 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:pmi00680]
D PMT9312_0260 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMT9312_0881 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PMT9312_0210 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMT9312_1667 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PMT9312_0789 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMT9312_0775 D-fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PMT9312_0619 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMT9312_1527 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PMT9312_1452 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMT9312_0614 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:pmi00910]
D PMT9312_0880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMT9312_1604 glutamate synthase (ferredoxin) K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
C 00920 Sulfur metabolism [PATH:pmi00920]
D PMT9312_0229 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PMT9312_0926 ATP adenylyltransferase-like protein K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D PMT9312_0168 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PMT9312_1293 CysQ protein-like protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PMT9312_0084 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PMT9312_0766 sulfite reductase (ferredoxin) K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D PMT9312_1731 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PMT9312_0126 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMT9312_0402 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMT9312_0643 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PMT9312_0403 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMT9312_0404 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pmi00061]
D PMT9312_0534 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMT9312_0027 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMT9312_0062 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMT9312_0792 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMT9312_1701 acyl carrier protein K02078 acpP; acyl carrier protein
D PMT9312_0139 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMT9312_0138 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PMT9312_1702 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMT9312_0453 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMT9312_1351 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMT9312_1434 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMT9312_0284 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMT9312_0398 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pmi00071]
D PMT9312_0398 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pmi00561]
D PMT9312_0840 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMT9312_0137 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PMT9312_1425 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMT9312_0140 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PMT9312_0185 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PMT9312_0592 lipase family protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D PMT9312_1751 glycosyl transferase, family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D PMT9312_0478 conserved hypothetical protein K20024 mgdE; monoglucosyldiacylglycerol epimerase [EC:5.1.3.34]
D PMT9312_1757 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:pmi00564]
D PMT9312_1425 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMT9312_0140 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PMT9312_0185 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PMT9312_1096 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PMT9312_0806 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pmi00230]
D PMT9312_0288 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PMT9312_0079 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMT9312_1091 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PMT9312_0004 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PMT9312_1438 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PMT9312_0909 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PMT9312_1014 formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PMT9312_0003 phosphoribosylformylglycinamidine synthase subunit II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PMT9312_0787 Phosphoribosylformylglycinamidine synthetase PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D PMT9312_0788 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PMT9312_1681 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PMT9312_0683 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PMT9312_0169 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PMT9312_1437 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PMT9312_1558 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PMT9312_0268 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMT9312_1133 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PMT9312_1365 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMT9312_0528 Protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PMT9312_1073 IMP dehydrogenase related 2 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PMT9312_0047 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMT9312_0281 Ham1-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PMT9312_0037 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PMT9312_0467 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PMT9312_0661 ribonucleotide reductase (class II) K00524 nrdJ; ribonucleotide reductase, class II [EC:1.17.4.2]
D PMT9312_0193 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PMT9312_0457 putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PMT9312_0157 conserved hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PMT9312_0507 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PMT9312_1631 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PMT9312_0926 ATP adenylyltransferase-like protein K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D PMT9312_0168 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PMT9312_0229 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PMT9312_0836 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PMT9312_0835 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PMT9312_0834 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:pmi00240]
D PMT9312_0975 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PMT9312_0848 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PMT9312_0235 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PMT9312_0569 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PMT9312_0201 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PMT9312_0277 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PMT9312_1426 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PMT9312_0522 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PMT9312_0047 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMT9312_1258 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PMT9312_1782 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PMT9312_1682 cytidylate kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D PMT9312_0995 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PMT9312_1365 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMT9312_0784 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PMT9312_1526 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PMT9312_1400 cytosine deaminase-like protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PMT9312_0661 ribonucleotide reductase (class II) K00524 nrdJ; ribonucleotide reductase, class II [EC:1.17.4.2]
D PMT9312_0246 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PMT9312_0132 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PMT9312_0245 Thymidylate synthase complementing protein ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pmi00250]
D PMT9312_0674 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMT9312_0104 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PMT9312_0979 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PMT9312_1324 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PMT9312_0881 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PMT9312_1800 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMT9312_0012 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMT9312_0507 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PMT9312_1558 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PMT9312_0224 Aspartoacylase K01437 ASPA; aspartoacylase [EC:3.5.1.15]
D PMT9312_0235 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PMT9312_0880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMT9312_0975 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PMT9312_0848 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PMT9312_0788 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PMT9312_1699 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMT9312_0004 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pmi00260]
D PMT9312_1740 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMT9312_1746 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMT9312_1062 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PMT9312_0595 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PMT9312_1808 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PMT9312_0260 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMT9312_0881 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PMT9312_1527 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PMT9312_0840 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D PMT9312_1452 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMT9312_1760 glycine dehydrogenase (decarboxylating) beta subunit / glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PMT9312_1780 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMT9312_1394 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMT9312_1761 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PMT9312_0892 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PMT9312_0572 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PMT9312_0166 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pmi00270]
D PMT9312_1731 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PMT9312_0126 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMT9312_0402 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMT9312_0923 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PMT9312_0317 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PMT9312_1664 adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PMT9312_1778 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PMT9312_0303 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D PMT9312_0528 Protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PMT9312_0378 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PMT9312_1718 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PMT9312_1740 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMT9312_1746 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMT9312_1062 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PMT9312_0643 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PMT9312_0403 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMT9312_0404 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMT9312_0642 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PMT9312_0922 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMT9312_1786 aminotransferases class-IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMT9312_0180 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PMT9312_0674 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMT9312_1452 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:pmi00280]
D PMT9312_0922 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMT9312_1786 aminotransferases class-IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMT9312_1394 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pmi00290]
D PMT9312_0892 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PMT9312_0258 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PMT9312_0257 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PMT9312_0794 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PMT9312_0526 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMT9312_1253 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMT9312_1412 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PMT9312_0782 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PMT9312_0922 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMT9312_1786 aminotransferases class-IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMT9312_1077 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pmi00300]
D PMT9312_1062 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PMT9312_1740 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMT9312_1746 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMT9312_1745 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMT9312_0968 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PMT9312_1397 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PMT9312_0912 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PMT9312_1592 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PMT9312_1101 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PMT9312_0408 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMT9312_0610 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pmi00310]
D PMT9312_1394 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pmi00220]
D PMT9312_1357 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PMT9312_1800 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMT9312_0012 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMT9312_0836 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PMT9312_0835 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PMT9312_0834 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D PMT9312_0788 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PMT9312_0880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMT9312_0674 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMT9312_0051 glutamate N-acetyltransferase / N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PMT9312_0500 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PMT9312_0908 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PMT9312_1397 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:pmi00330]
D PMT9312_0531 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D PMT9312_1400 cytosine deaminase-like protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PMT9312_0046 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PMT9312_1779 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PMT9312_1778 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PMT9312_1664 adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMT9312_0392 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PMT9312_0796 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PMT9312_0590 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PMT9312_0360 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PMT9312_0674 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pmi00340]
D PMT9312_0560 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PMT9312_0900 histidyl-tRNA synthetase-like protein K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D PMT9312_0578 phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PMT9312_0804 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PMT9312_1071 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PMT9312_0429 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PMT9312_0283 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PMT9312_0188 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMT9312_1581 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMT9312_0224 Aspartoacylase K01437 ASPA; aspartoacylase [EC:3.5.1.15]
C 00350 Tyrosine metabolism [PATH:pmi00350]
D PMT9312_0674 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMT9312_0188 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMT9312_1267 macrophage migration inhibitory factor family K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
C 00360 Phenylalanine metabolism [PATH:pmi00360]
D PMT9312_0674 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMT9312_0188 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMT9312_1267 macrophage migration inhibitory factor family K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
C 00380 Tryptophan metabolism [PATH:pmi00380]
D PMT9312_1394 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pmi00400]
D PMT9312_1792 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMT9312_0682 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PMT9312_0383 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PMT9312_0111 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PMT9312_0613 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PMT9312_0226 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PMT9312_1669 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PMT9312_0847 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PMT9312_0537 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PMT9312_1393 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PMT9312_0572 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PMT9312_0166 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PMT9312_1282 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D PMT9312_1657 arogenate dehydrogenase (NADP) K15226 tyrAa; arogenate dehydrogenase (NADP+) [EC:1.3.1.78]
D PMT9312_1596 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PMT9312_0674 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMT9312_0188 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pmi00410]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMT9312_1682 cytidylate kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pmi00450]
D PMT9312_0403 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMT9312_0404 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMT9312_0923 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PMT9312_0072 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PMT9312_1247 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PMT9312_0213 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PMT9312_0229 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PMT9312_0304 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PMT9312_0934 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pmi00460]
D PMT9312_0979 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PMT9312_0260 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pmi00470]
D PMT9312_1620 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PMT9312_1402 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMT9312_0788 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PMT9312_0617 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PMT9312_1461 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMT9312_0912 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PMT9312_1101 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:pmi00480]
D PMT9312_0180 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PMT9312_1430 leucyl aminopeptidase, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PMT9312_1011 Peptidase M, neutral zinc metallopeptidase, zinc-binding site K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PMT9312_0113 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMT9312_0630 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMT9312_0566 conserved hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMT9312_0567 NADPH-glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PMT9312_1688 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PMT9312_0778 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PMT9312_1085 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMT9312_1016 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PMT9312_1778 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:pmi00540]
D PMT9312_1433 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PMT9312_1435 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PMT9312_0795 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PMT9312_1432 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PMT9312_1337 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PMT9312_1347 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PMT9312_1336 conserved hypothetical protein K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pmi00541]
D PMT9312_1317 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMT9312_1334 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMT9312_1312 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMT9312_1313 putative nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PMT9312_1329 mannose-6-phosphate isomerase, type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PMT9312_1316 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PMT9312_1315 NAD dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PMT9312_0611 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PMT9312_1346 N-acetylneuraminate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D PMT9312_1299 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D PMT9312_1300 WblB protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D PMT9312_1304 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D PMT9312_1298 putative acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:pmi00550]
D PMT9312_1396 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMT9312_0021 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMT9312_0022 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PMT9312_1461 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMT9312_0408 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMT9312_1402 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMT9312_0610 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PMT9312_1103 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PMT9312_0843 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PMT9312_1802 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMT9312_0199 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PMT9312_0426 putative penicillin binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMT9312_0041 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMT9312_0518 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMT9312_0915 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)-like protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PMT9312_0769 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:pmi00552]
D PMT9312_0843 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pmi00543]
D PMT9312_1731 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pmi00730]
D PMT9312_1704 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PMT9312_0362 Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PMT9312_0913 cysteine desulfurase (class-V aminotransferase family)-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMT9312_0172 nifS-like aminotransferase class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMT9312_0048 putative thiamine biosynthesis oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PMT9312_0893 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PMT9312_1756 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PMT9312_1368 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PMT9312_0024 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PMT9312_0019 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PMT9312_1631 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PMT9312_0361 putative transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:pmi00740]
D PMT9312_0907 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PMT9312_1359 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PMT9312_1735 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PMT9312_0441 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PMT9312_1367 FMN adenylyltransferase / riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PMT9312_0288 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:pmi00750]
D PMT9312_1456 conserved hypothetical protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PMT9312_0053 aldo/keto reductase family K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D PMT9312_0028 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PMT9312_1118 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D PMT9312_1808 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pmi00760]
D PMT9312_0104 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PMT9312_0678 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PMT9312_0190 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PMT9312_1365 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMT9312_1538 Cytidyltransferase-related protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PMT9312_1539 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D PMT9312_1363 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PMT9312_0158 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PMT9312_1244 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PMT9312_1243 putative nicotinamide nucleotide transhydrogenase, subunit alpha 2 (A2) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PMT9312_1242 putative nicotinamide nucleotide transhydrogenase, subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:pmi00770]
D PMT9312_0526 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMT9312_1253 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMT9312_1412 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PMT9312_0782 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PMT9312_1406 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PMT9312_1682 cytidylate kinase K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25]
D PMT9312_0083 putative transcriptional acitvator, Baf K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PMT9312_0231 Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PMT9312_0916 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PMT9312_0050 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PMT9312_0922 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMT9312_1786 aminotransferases class-IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pmi00780]
D PMT9312_1563 biotin synthesis protein BioC, putative K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D PMT9312_1702 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMT9312_0453 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMT9312_1351 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMT9312_1434 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMT9312_0284 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMT9312_1562 conserved hypothetical protein K19560 bioK; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D PMT9312_1561 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PMT9312_1565 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PMT9312_1564 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PMT9312_1104 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PMT9312_0432 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pmi00785]
D PMT9312_0397 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PMT9312_1107 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PMT9312_1606 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PMT9312_0539 biotin/lipoate A/B protein ligase family K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PMT9312_1394 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMT9312_1384 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PMT9312_0869 pyruvate dehydrogenase E1 beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PMT9312_0400 dihydrolipoamide acetyltransferase component (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMT9312_1760 glycine dehydrogenase (decarboxylating) beta subunit / glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PMT9312_1780 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMT9312_1761 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pmi00790]
D PMT9312_0536 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PMT9312_0591 Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PMT9312_0289 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PMT9312_0970 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PMT9312_1398 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PMT9312_0907 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PMT9312_0186 anthranilate synthase, component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D PMT9312_1785 anthranilate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PMT9312_0110 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PMT9312_0579 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PMT9312_0492 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PMT9312_1783 organic radical activating enzyme-like protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PMT9312_1784 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PMT9312_1554 conserved hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:pmi00670]
D PMT9312_1080 methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PMT9312_0260 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMT9312_0909 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PMT9312_0268 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMT9312_0959 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PMT9312_1780 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMT9312_0923 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PMT9312_0245 Thymidylate synthase complementing protein ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D PMT9312_1795 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PMT9312_0155 conserved hypothetical protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PMT9312_1064 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pmi00860]
D PMT9312_0473 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMT9312_0776 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PMT9312_0484 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PMT9312_0217 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PMT9312_0496 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PMT9312_0116 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PMT9312_0583 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PMT9312_1674 coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D PMT9312_0919 conserved hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D PMT9312_0525 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PMT9312_1787 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PMT9312_0447 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PMT9312_0446 cytochrome c oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PMT9312_0646 conserved hypothetical protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D PMT9312_0385 cobalt-factor II C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D PMT9312_1617 precorrin-3 methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D PMT9312_0459 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D PMT9312_0504 precorrin-6X reductase-like protein K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D PMT9312_0036 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D PMT9312_1362 putative precorrin-6y methylase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D PMT9312_1738 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D PMT9312_1083 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D PMT9312_0921 cobaltochelatase CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D PMT9312_0247 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PMT9312_1662 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PMT9312_0523 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PMT9312_1259 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PMT9312_1413 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PMT9312_0938 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D PMT9312_0272 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PMT9312_0969 cobaltochelatase CobN subunit K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D PMT9312_0290 protoporphyrin IX magnesium-chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D PMT9312_1066 protoporphyrin IX magnesium-chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D PMT9312_0170 Mg-protoporphyrin IX methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D PMT9312_0956 Mg-protoporphyrin IX monomethyl ester (oxidative) cyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D PMT9312_0634 NADPH-protochlorophyllide oxidoreductase K00218 por; protochlorophyllide reductase [EC:1.3.1.33]
D PMT9312_0542 NADPH-protochlorophyllide oxidoreductase K00218 por; protochlorophyllide reductase [EC:1.3.1.33]
D PMT9312_1459 short-chain dehydrogenase/reductase (SDR) superfamily K00218 por; protochlorophyllide reductase [EC:1.3.1.33]
D PMT9312_0543 light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D PMT9312_0545 light-independent protochlorophyllide reductase, N subunit K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D PMT9312_0544 light-independent protochlorophyllide reductase, B subunit K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D PMT9312_0427 chlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D PMT9312_0768 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D PMT9312_1686 Heme oxygenase (decyclizing) K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D PMT9312_1685 phycoerythrobilin:ferredoxin oxidoreductase K05369 pebA; 15,16-dihydrobiliverdin:ferredoxin oxidoreductase [EC:1.3.7.2]
D PMT9312_1684 phycoerythrobilin:ferredoxin oxidoreductase K05370 pebB; phycoerythrobilin:ferredoxin oxidoreductase [EC:1.3.7.3]
D PMT9312_0755 phycocyanobilin:ferredoxin oxidoreductase K05371 pcyA; phycocyanobilin:ferredoxin oxidoreductase [EC:1.3.7.5]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pmi00130]
D PMT9312_1768 conserved hypothetical protein K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D PMT9312_0456 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PMT9312_0966 2-octaprenyl-6-methoxyphenol 4-monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PMT9312_0179 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PMT9312_0607 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PMT9312_0177 putative O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PMT9312_0176 putative O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase) K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PMT9312_0608 1,4-Dihydroxy-2-naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PMT9312_0175 conserved hypothetical protein K12073 E3.1.2.28; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D PMT9312_0178 1,4-dihydroxy-2-naphthoate phytyltransferase K23094 ABC4; 2-carboxy-1,4-naphthoquinone phytyltransferase [EC:2.5.1.130]
D PMT9312_0085 putative NADH dehydrogenase, transport associated K17872 NDC1; demethylphylloquinone reductase [EC:1.6.5.12]
D PMT9312_0430 demethylmenaquinone methyltransferase K23095 MENG; demethylphylloquinol methyltransferase [EC:2.1.1.329]
D PMT9312_1597 SAM (and some other nucleotide) binding motif precursor K18534 K18534; MPBQ/MSBQ methyltransferase [EC:2.1.1.295]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pmi00900]
D PMT9312_0893 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PMT9312_1238 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PMT9312_0454 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PMT9312_0867 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PMT9312_1374 MECDP-synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PMT9312_0676 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PMT9312_0266 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PMT9312_1081 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PMT9312_0618 Trans-hexaprenyltranstransferase K05356 SPS; all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]
D PMT9312_1103 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PMT9312_0768 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:pmi00906]
D PMT9312_0145 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D PMT9312_0146 three-step phytoene desaturase / zeta-carotene desaturase K02293 PDS; 15-cis-phytoene desaturase [EC:1.3.5.5]
D PMT9312_0150 conserved hypothetical protein K15744 Z-ISO; zeta-carotene isomerase [EC:5.2.1.12]
D PMT9312_0118 zeta-carotene desaturase K00514 ZDS; zeta-carotene desaturase [EC:1.3.5.6]
D PMT9312_1126 putative carotenoid isomerase K09835 crtISO; prolycopene isomerase [EC:5.2.1.13]
D PMT9312_1075 lycopene cyclase (CrtL-type) K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D PMT9312_0633 lycopene cyclase (CrtL-type) K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D PMT9312_0238 beta-carotene hydroxylase K02294 crtR; beta-carotene hydroxylase [EC:1.14.13.-]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PMT9312_1703 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D PMT9312_0179 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:pmi00332]
D PMT9312_0796 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PMT9312_0590 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pmi00261]
D PMT9312_0229 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PMT9312_1740 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMT9312_1746 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMT9312_1745 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMT9312_0968 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pmi00521]
D PMT9312_0596 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PMT9312_0079 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMT9312_0100 inositol monophosphate family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PMT9312_0901 myo-inositol-1(or 4)-monophosphatase-like protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PMT9312_0596 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:pmi00401]
D PMT9312_0674 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMT9312_0188 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PMT9312_1669 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PMT9312_0139 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMT9312_0453 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMT9312_1351 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMT9312_0284 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PMT9312_1701 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D PMT9312_0317 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation [PATH:pmi00364]
D PMT9312_1497 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:pmi00625]
D PMT9312_0337 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pmi00361]
D PMT9312_1497 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:pmi00623]
D PMT9312_1497 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
D PMT9312_0836 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PMT9312_0835 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PMT9312_0834 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pmi03020]
D PMT9312_1578 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMT9312_1576 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMT9312_1577 DNA-directed RNA polymerase gamma chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMT9312_1628 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMT9312_1524 putative DNA-directed RNA polymerase (omega chain) K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pmi03010]
D PMT9312_0318 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D PMT9312_0530 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D PMT9312_0761 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D PMT9312_1644 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D PMT9312_0405 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D PMT9312_1634 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D PMT9312_1799 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D PMT9312_1602 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D PMT9312_1637 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D PMT9312_1624 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D PMT9312_1599 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D PMT9312_1629 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D PMT9312_1603 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D PMT9312_1630 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D PMT9312_1291 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D PMT9312_0856 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D PMT9312_1381 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D PMT9312_1641 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D PMT9312_0932 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D PMT9312_1646 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D PMT9312_1580 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D PMT9312_0993 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D PMT9312_0205 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D PMT9312_1647 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D PMT9312_1650 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D PMT9312_1649 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D PMT9312_1638 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D PMT9312_1636 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D PMT9312_0203 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D PMT9312_1765 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D PMT9312_0204 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D PMT9312_0206 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D PMT9312_1625 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D PMT9312_1640 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D PMT9312_1633 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D PMT9312_1643 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D PMT9312_1627 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D PMT9312_1635 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D PMT9312_0475 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D PMT9312_1754 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D PMT9312_1442 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D PMT9312_1645 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D PMT9312_1648 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D PMT9312_1639 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D PMT9312_1443 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D PMT9312_0898 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D PMT9312_1642 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D PMT9312_1623 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D PMT9312_0947 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D PMT9312_0931 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D PMT9312_1284 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D PMT9312_1753 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D PMT9312_1815 rpl36; 50S Ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PMT9312_R0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMT9312_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMT9312_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pmi00970]
D PMT9312_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMT9312_R0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMT9312_R0005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMT9312_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMT9312_R0042 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMT9312_R0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMT9312_R0003 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMT9312_R0016 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMT9312_R0041 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PMT9312_R0039 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMT9312_R0024 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMT9312_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMT9312_R0044 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMT9312_R0033 tRNA-His K14226 tRNA-His; tRNA His
D PMT9312_R0010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMT9312_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMT9312_R0002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMT9312_R0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMT9312_R0004 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMT9312_R0025 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMT9312_R0023 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMT9312_R0006 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMT9312_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMT9312_R0007 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PMT9312_R0026 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMT9312_R0020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMT9312_R0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMT9312_R0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMT9312_R0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMT9312_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMT9312_R0037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMT9312_R0014 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMT9312_R0008 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMT9312_R0017 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PMT9312_R0015 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PMT9312_R0036 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMT9312_R0045 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMT9312_0473 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMT9312_0853 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PMT9312_0049 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PMT9312_0237 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PMT9312_0045 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMT9312_1781 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMT9312_1265 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMT9312_0767 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMT9312_0597 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMT9312_1289 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMT9312_1237 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMT9312_0934 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMT9312_0959 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PMT9312_1775 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMT9312_0911 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMT9312_0240 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMT9312_1711 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMT9312_0189 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMT9312_0509 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMT9312_0623 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMT9312_1364 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMT9312_0930 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMT9312_1427 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMT9312_0598 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pmi03060]
D PMT9312_1632 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PMT9312_0208 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D PMT9312_1528 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D PMT9312_0870 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PMT9312_0871 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D PMT9312_1287 putative inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMT9312_1732 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMT9312_1382 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMT9312_R0034 ffs; SRP RNA K01983 ffs; SRP RNA
D PMT9312_0010 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PMT9312_1519 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D PMT9312_0350 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D PMT9312_0464 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D PMT9312_0606 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMT9312_0514 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMT9312_1391 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMT9312_0885 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pmi04122]
D PMT9312_0913 cysteine desulfurase (class-V aminotransferase family)-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMT9312_0172 nifS-like aminotransferase class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMT9312_1387 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PMT9312_1661 Rhodanese-like protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D PMT9312_1369 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:pmi03018]
D PMT9312_1593 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMT9312_0210 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMT9312_1292 RNA binding S1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PMT9312_0953 RNA binding S1 K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMT9312_1112 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMT9312_1744 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PMT9312_1797 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D PMT9312_0903 molecular chaperone DnaK, heat shock protein HSP70 K04043 dnaK; molecular chaperone DnaK
D PMT9312_1529 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMT9312_0451 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMT9312_1789 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PMT9312_0305 tRNA nucleotidyltransferase/poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pmi03030]
D PMT9312_0621 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMT9312_0854 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMT9312_1750 DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMT9312_0131 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMT9312_1739 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMT9312_0001 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMT9312_1766 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMT9312_0860 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PMT9312_1716 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMT9312_0202 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PMT9312_1594 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PMT9312_0694 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pmi03410]
D PMT9312_0810 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PMT9312_0334 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PMT9312_0675 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PMT9312_0485 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PMT9312_0694 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pmi03420]
D PMT9312_0961 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PMT9312_1804 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PMT9312_1741 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PMT9312_0918 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PMT9312_0306 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMT9312_0694 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pmi03430]
D PMT9312_1737 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PMT9312_0219 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D PMT9312_0306 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMT9312_1716 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMT9312_0854 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMT9312_0001 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMT9312_1750 DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMT9312_1739 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMT9312_0131 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMT9312_0621 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMT9312_0694 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:pmi03440]
D PMT9312_1716 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMT9312_1665 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PMT9312_0394 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PMT9312_1108 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D PMT9312_1654 RecA protein K03553 recA; recombination protein RecA
D PMT9312_0857 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PMT9312_1708 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PMT9312_1065 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PMT9312_0764 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PMT9312_1114 DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PMT9312_1116 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PMT9312_1113 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PMT9312_0854 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMT9312_0001 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMT9312_1750 DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMT9312_1739 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMT9312_0131 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMT9312_0621 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMT9312_0498 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
D PMT9312_1155 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pmi03250]
D PMT9312_1254 cyclophilin-type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pmi02010]
D PMT9312_1261 putative iron ABC transporter, substrate binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMT9312_0490 putative iron ABC transporter K02011 afuB; iron(III) transport system permease protein
D PMT9312_0811 ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMT9312_0291 putative ABC transporter K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PMT9312_1422 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PMT9312_0292 ATPase K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PMT9312_0722 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D PMT9312_0727 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein
D PMT9312_0728 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein
D PMT9312_0729 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PMT9312_0673 Phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D PMT9312_0671 putative phosphonate ABC transporter K02042 phnE; phosphonate transport system permease protein
D PMT9312_0672 ATPase K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PMT9312_1168 amino acid ABC transporter substrate-binding protein, PAAT family K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PMT9312_1167 amino acid ABC transporter membrane protein 1, PAAT family K09970 aapQ; general L-amino acid transport system permease protein
D PMT9312_1166 amino acid ABC transporter membrane protein 2, PAAT family K09971 aapM; general L-amino acid transport system permease protein
D PMT9312_1165 amino acid ABC transporter ATP-binding protein, PAAT family K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PMT9312_0829 urea-binding protein K11959 urtA; urea transport system substrate-binding protein
D PMT9312_0828 urea ABC transporter membrane protein K11960 urtB; urea transport system permease protein
D PMT9312_0827 urea ABC transporter membrane protein K11961 urtC; urea transport system permease protein
D PMT9312_0826 urea ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D PMT9312_0825 urea ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D PMT9312_0601 ABC transporter, substrate binding protein, possibly Mn K11601 mntC; manganese transport system substrate-binding protein
D PMT9312_0603 ABC transporter component, possibly Mn transport K11602 mntB; manganese transport system permease protein
D PMT9312_0602 ATPase K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D PMT9312_0886 biotin synthase K03523 bioY; biotin transport system substrate-specific component
D PMT9312_0388 cobalt transport protein-like protein K16785 ecfT; energy-coupling factor transport system permease protein
D PMT9312_0128 ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PMT9312_0666 ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PMT9312_1482 permease-like protein K11720 lptG; lipopolysaccharide export system permease protein
D PMT9312_0772 ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PMT9312_0845 ATPase K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMT9312_0561 ATPase K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMT9312_1182 ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D PMT9312_0067 ATPase K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:pmi03070]
D PMT9312_1183 leukotoxin secretion protein-like protein K11003 hlyD; membrane fusion protein, hemolysin D
D PMT9312_1182 ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D PMT9312_0870 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PMT9312_0871 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D PMT9312_0208 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D PMT9312_1528 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D PMT9312_1632 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PMT9312_1287 putative inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMT9312_1732 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMT9312_0010 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PMT9312_1382 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMT9312_1519 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D PMT9312_0350 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D PMT9312_0464 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pmi02020]
D PMT9312_0718 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMT9312_0717 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PMT9312_0722 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D PMT9312_0446 cytochrome c oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PMT9312_0565 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PMT9312_0601 ABC transporter, substrate binding protein, possibly Mn K11601 mntC; manganese transport system substrate-binding protein
D PMT9312_0602 ATPase K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D PMT9312_0603 ABC transporter component, possibly Mn transport K11602 mntB; manganese transport system permease protein
D PMT9312_1439 multi-sensor signal transduction histidine kinase K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D PMT9312_1088 histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D PMT9312_0130 two component transcriptional regulator, winged helix family K10697 rpaA; two-component system, OmpR family, response regulator RpaA
D PMT9312_0136 two component transcriptional regulator, winged helix family K11329 rpaB; two-component system, OmpR family, response regulator RpaB
D PMT9312_0765 D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PMT9312_0769 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PMT9312_1473 fatty acid desaturase, type 2 K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PMT9312_1556 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D PMT9312_0880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMT9312_1199 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D PMT9312_1201 Tfp pilus assembly protein PilE-like protein K02650 pilA; type IV pilus assembly protein PilA
D PMT9312_1375 polysaccharide export-related periplasmic protein K01991 wza; polysaccharide biosynthesis/export protein
D PMT9312_1683 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pmi02024]
D PMT9312_1669 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PMT9312_1792 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMT9312_0398 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMT9312_1359 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PMT9312_1060 ABC transporter, substrate binding protein, possibly oligopeptides K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMT9312_1059 putative ABC transporter, oligopeptides K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMT9312_0417 putative ABC transporter, oligopeptides K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMT9312_0194 ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMT9312_1287 putative inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMT9312_0208 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D PMT9312_1528 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D PMT9312_1632 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PMT9312_1732 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMT9312_0010 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PMT9312_1382 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D PMT9312_1385 type II alternative RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D PMT9312_0497 Sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D PMT9312_1790 type II alternative RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D PMT9312_0577 putative type II alternative sigma factor, sigma70 family K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PMT9312_0210 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pmi04980]
D PMT9312_0247 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PMT9312_0923 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pmi01501]
D PMT9312_0426 putative penicillin binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMT9312_0041 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMT9312_0518 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pmi01502]
D PMT9312_0765 D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PMT9312_1402 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMT9312_1620 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PMT9312_0610 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PMT9312_1802 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMT9312_0199 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PMT9312_0769 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pmi01503]
D PMT9312_0616 Cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMT9312_1254 cyclophilin-type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PMT9312_1433 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pmi01000]
C 01001 Protein kinases [BR:pmi01001]
D PMT9312_0877 putative anti-sigma regulatory factor (serine/threonine protein kinase) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PMT9312_1355 Uncharacterized protein involved in exopolysaccharide biosynthesis-like protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D PMT9312_0718 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMT9312_1439 multi-sensor signal transduction histidine kinase K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D PMT9312_1088 histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pmi01009]
D PMT9312_1718 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PMT9312_0899 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:pmi01002]
D PMT9312_0885 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PMT9312_1186 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PMT9312_0037 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PMT9312_0336 Peptidoglycan-binding LysM K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D PMT9312_0004 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PMT9312_1604 glutamate synthase (ferredoxin) K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D PMT9312_1699 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMT9312_1324 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PMT9312_0516 membrane associated protease-like protein K07052 K07052; CAAX protease family protein
D PMT9312_0359 abortive infection protein K07052 K07052; CAAX protease family protein
D PMT9312_1011 Peptidase M, neutral zinc metallopeptidase, zinc-binding site K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PMT9312_0593 oligopeptidase A, Metallo peptidase, MEROPS family M03A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PMT9312_0769 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PMT9312_0765 D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PMT9312_1430 leucyl aminopeptidase, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PMT9312_0477 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PMT9312_1535 aminopeptidase P, Metallo peptidase, MEROPS family M24B K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PMT9312_0494 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D PMT9312_0946 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMT9312_0228 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMT9312_0751 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMT9312_1358 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMT9312_0915 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)-like protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PMT9312_1410 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PMT9312_1411 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PMT9312_1748 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PMT9312_0750 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PMT9312_1598 Peptidase S16, lon-like protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PMT9312_1356 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PMT9312_0863 SOS response UmuD protein, Serine peptidase, MEROPS family S24 K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PMT9312_0606 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMT9312_0514 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMT9312_1391 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMT9312_0360 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PMT9312_0330 C-terminal processing peptidase-2, Serine peptidase, MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PMT9312_0677 C-terminal processing peptidase-2, Serine peptidase, MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PMT9312_1281 signal peptide peptidase A, Serine peptidase, MEROPS family S49 K04773 sppA; protease IV [EC:3.4.21.-]
D PMT9312_1000 conserved hypothetical protein K05995 pepE; dipeptidase E [EC:3.4.13.21]
D PMT9312_0455 conserved hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PMT9312_0958 modulator of DNA gyrase-like protein K03592 pmbA; PmbA protein
D PMT9312_0957 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:pmi01003]
D PMT9312_1751 glycosyl transferase, family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D PMT9312_0609 Glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D PMT9312_0426 putative penicillin binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMT9312_0837 Vng0271c-like protein K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
D PMT9312_1279 glycosyl transferases group 1 K03867 BGLUT; UDP-glucose:tetrahydrobiopterin glucosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pmi01005]
D PMT9312_1433 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PMT9312_1432 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PMT9312_1435 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PMT9312_0795 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PMT9312_1337 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PMT9312_1347 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmi01011]
D PMT9312_1396 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMT9312_0021 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMT9312_0022 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PMT9312_1461 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMT9312_0408 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMT9312_1402 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMT9312_1620 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PMT9312_0617 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PMT9312_0455 conserved hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PMT9312_1802 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMT9312_0199 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PMT9312_0843 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PMT9312_0263 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D PMT9312_0426 putative penicillin binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMT9312_0041 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMT9312_0518 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMT9312_0915 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)-like protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PMT9312_0765 D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PMT9312_0769 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PMT9312_0336 Peptidoglycan-binding LysM K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D PMT9312_1446 sporulation protein SpoIID-like protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D PMT9312_0616 Cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pmi01004]
D PMT9312_0139 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMT9312_0138 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PMT9312_1702 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMT9312_0453 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMT9312_1351 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMT9312_1434 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMT9312_0284 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMT9312_1473 fatty acid desaturase, type 2 K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PMT9312_0619 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMT9312_0398 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMT9312_0137 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PMT9312_1425 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMT9312_0140 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:pmi01006]
D PMT9312_1081 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PMT9312_0618 Trans-hexaprenyltranstransferase K05356 SPS; all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]
D PMT9312_1103 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PMT9312_0145 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D PMT9312_1728 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PMT9312_0456 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PMT9312_0447 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PMT9312_0427 chlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:pmi01007]
D PMT9312_0473 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMT9312_1427 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMT9312_0598 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PMT9312_1237 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMT9312_0189 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMT9312_0934 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMT9312_0240 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMT9312_1775 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMT9312_0911 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMT9312_1711 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMT9312_1781 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMT9312_0623 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMT9312_1265 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMT9312_0767 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMT9312_1289 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMT9312_0509 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMT9312_0597 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMT9312_0045 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMT9312_1364 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMT9312_0930 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMT9312_0674 L-aspartate aminotransferase apoenzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMT9312_1592 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PMT9312_0188 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMT9312_1561 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PMT9312_1397 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PMT9312_1565 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PMT9312_0484 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PMT9312_0922 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMT9312_1786 aminotransferases class-IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMT9312_0881 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PMT9312_1304 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pmi00194]
D PMT9312_0225 photosystem q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D PMT9312_1144 photosystem q(b) protein K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
D PMT9312_1256 photosystem II D2 protein (photosystem q(a) protein) K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9]
D PMT9312_1257 photosystem II 44 kDa subunit reaction center protein K02705 psbC; photosystem II CP43 chlorophyll apoprotein
D PMT9312_0321 photosystem II PsbB protein (CP47) K02704 psbB; photosystem II CP47 chlorophyll apoprotein
D PMT9312_0299 cytochrome b559, alpha subunit K02707 psbE; photosystem II cytochrome b559 subunit alpha
D PMT9312_1176 PsbF protein-like protein K02708 psbF; photosystem II cytochrome b559 subunit beta
D PMT9312_0300 cytochrome b559, beta subunit K02708 psbF; photosystem II cytochrome b559 subunit beta
D PMT9312_0301 photosystem II PsbL protein K02713 psbL; photosystem II PsbL protein
D PMT9312_0302 photosytem II PsbJ protein K02711 psbJ; photosystem II PsbJ protein
D PMT9312_0253 photosystem II PsbH protein K02709 psbH; photosystem II PsbH protein
D PMT9312_0255 photosystem II reaction center PsbI protein K02710 psbI; photosystem II PsbI protein
D PMT9312_0274 photosystem II protein PsbK K02712 psbK; photosystem II PsbK protein
D PMT9312_0323 photosystem II reaction center M protein (PsbM)-like protein K02714 psbM; photosystem II PsbM protein
D PMT9312_0320 photosystem II PsbT protein K02718 psbT; photosystem II PsbT protein
D PMT9312_1736 putative photosystem II PsbZ protein K02724 psbZ; photosystem II PsbZ protein
D PMT9312_1128 photosystem II reaction center Y protein (PsbY)-like protein K02723 psbY; photosystem II PsbY protein
D PMT9312_0508 photosystem II reaction center Psb27 protein-like protein K08902 psb27; photosystem II Psb27 protein
D PMT9312_0874 photosystem II reaction center Psb28 protein-like protein K08903 psb28; photosystem II 13kDa protein
D PMT9312_0230 photosystem II manganese-stabilizing protein K02716 psbO; photosystem II oxygen-evolving enhancer protein 1
D PMT9312_1109 photosystem II oxygen evolving complex protein PsbP K02717 psbP; photosystem II oxygen-evolving enhancer protein 2
D PMT9312_0064 hypothetical protein K02722 psbX; photosystem II PsbX protein
D PMT9312_1616 photosystem I core protein PsaA K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12]
D PMT9312_1615 photosystem I core protein PsaB K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12]
D PMT9312_1700 photosystem I subunit PsaC K02691 psaC; photosystem I iron-sulfur center [EC:1.97.1.12]
D PMT9312_1670 photosystem I protein PsaD K02692 psaD; photosystem I subunit II
D PMT9312_0335 photosystem I PsaE protein (subunit IV) K02693 psaE; photosystem I subunit IV
D PMT9312_0469 photosystem I PsaF protein (subunit III) K02694 psaF; photosystem I subunit III
D PMT9312_1612 photosystem I subunit VIII (PsaI) K02696 psaI; photosystem I subunit VIII
D PMT9312_0468 photosystem I PsaJ protein (subunit IX) K02697 psaJ; photosystem I subunit IX
D PMT9312_0894 photosystem I PsaK protein (subunit X) K02698 psaK; photosystem I subunit X
D PMT9312_1611 photosystem I PsaL protein (subunit XI) K02699 psaL; photosystem I subunit XI
D PMT9312_0540 photosystem I reaction center subunit XII (PsaM)-like protein K02700 psaM; photosystem I subunit XII
D PMT9312_0461 cytochrome F K02634 petA; apocytochrome f
D PMT9312_0331 cytochrome b6 K02635 petB; cytochrome b6
D PMT9312_0462 Twin-arginine translocation pathway signal K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D PMT9312_0332 petD protein (subunit IV of the Cytochrome b6f complex) K02637 petD; cytochrome b6-f complex subunit 4
D PMT9312_1069 cytochrome b6/f complex, subunit V K02640 petG; cytochrome b6-f complex subunit 5
D PMT9312_1251 cytochrome b6-F complex subunit VII K02643 petM; cytochrome b6-f complex subunit 7
D PMT9312_0748 cytochrome b6-f complex subunit VIII K03689 petN; cytochrome b6-f complex subunit 8
D PMT9312_0581 plastocyanin K02638 petE; plastocyanin
D PMT9312_1542 Ferredoxin (2Fe-2S) K02639 petF; ferredoxin
D PMT9312_0902 ferredoxin, petF-like protein K02639 petF; ferredoxin
D PMT9312_1450 Ferredoxin (2Fe-2S) K02639 petF; ferredoxin
D PMT9312_1086 ferredoxin-NADP oxidoreductase (FNR) K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2]
D PMT9312_0716 cytochrome c K08906 petJ; cytochrome c6
D PMT9312_1532 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PMT9312_1531 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PMT9312_1543 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PMT9312_1544 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PMT9312_1545 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PMT9312_1546 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMT9312_1547 ATP synthase F0 subcomplex B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMT9312_1548 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PMT9312_1549 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMT9312_1550 ATP synthase subunit 1-like protein K02116 atpI; ATP synthase protein I
D PMT9312_0307 phycobilisome protein K05377 cpeB; phycoerythrin beta chain
D PMT9312_0308 phycoerythrin linker protein CpeS-like protein K05382 cpeS; phycoerythrin-associated linker protein
D PMT9312_0627 light-harvesting complex protein K08918 pcbA; chlorophyll a/b binding light-harvesting protein PcbA
D PMT9312_1271 chlorophyll a/b binding light harvesting protein PcbD K08921 pcbD; chlorophyll a/b binding light-harvesting protein PcbD
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pmi03000]
D PMT9312_0378 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PMT9312_1730 transcriptional regulator, GntR family K07978 plmA; GntR family transcriptional regulator
D PMT9312_0637 putative ferric uptake regulator, FUR family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PMT9312_1041 putative ferric uptake regulator, FUR family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PMT9312_0248 transcriptional regulator, Crp/Fnr family K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator
D PMT9312_0726 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PMT9312_0432 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PMT9312_0361 putative transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PMT9312_1526 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PMT9312_0319 Protein of unknown function DUF193 K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:pmi03021]
D PMT9312_1628 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMT9312_1578 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMT9312_1576 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMT9312_1577 DNA-directed RNA polymerase gamma chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMT9312_1524 putative DNA-directed RNA polymerase (omega chain) K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PMT9312_1385 type II alternative RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D PMT9312_0497 Sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D PMT9312_1790 type II alternative RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D PMT9312_0577 putative type II alternative sigma factor, sigma70 family K03086 rpoD; RNA polymerase primary sigma factor
D PMT9312_1722 type II alternative RNA polymerase sigma factor, sigma-70 family K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D PMT9312_1585 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D PMT9312_0009 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D PMT9312_0207 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D PMT9312_0011 serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PMT9312_0877 putative anti-sigma regulatory factor (serine/threonine protein kinase) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
C 03019 Messenger RNA biogenesis [BR:pmi03019]
D PMT9312_1593 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMT9312_1696 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMT9312_1744 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PMT9312_0953 RNA binding S1 K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMT9312_1112 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMT9312_0210 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMT9312_1292 RNA binding S1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PMT9312_1797 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D PMT9312_0903 molecular chaperone DnaK, heat shock protein HSP70 K04043 dnaK; molecular chaperone DnaK
D PMT9312_1529 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMT9312_0451 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMT9312_1789 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PMT9312_0305 tRNA nucleotidyltransferase/poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:pmi03011]
D PMT9312_0318 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D PMT9312_0530 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D PMT9312_0761 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D PMT9312_1644 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D PMT9312_0405 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D PMT9312_1634 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D PMT9312_1799 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D PMT9312_1602 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D PMT9312_1637 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D PMT9312_1624 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D PMT9312_1599 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D PMT9312_1629 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D PMT9312_1603 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D PMT9312_1630 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D PMT9312_1291 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D PMT9312_0856 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D PMT9312_1381 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D PMT9312_1641 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D PMT9312_0932 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D PMT9312_1646 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D PMT9312_1580 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D PMT9312_0993 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D PMT9312_1533 conserved hypothetical protein K19032 PSRP3; 30S ribosomal protein 3
D PMT9312_0205 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D PMT9312_1647 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D PMT9312_1650 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D PMT9312_1649 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D PMT9312_1638 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D PMT9312_1636 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D PMT9312_1765 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D PMT9312_0204 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D PMT9312_0206 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D PMT9312_0203 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D PMT9312_1625 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D PMT9312_1640 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D PMT9312_1633 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D PMT9312_1643 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D PMT9312_1627 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D PMT9312_1635 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D PMT9312_0475 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D PMT9312_1754 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D PMT9312_1442 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D PMT9312_1645 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D PMT9312_1648 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D PMT9312_1639 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D PMT9312_1443 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D PMT9312_0898 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D PMT9312_1642 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D PMT9312_1623 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D PMT9312_0947 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D PMT9312_0931 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D PMT9312_1284 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D PMT9312_1753 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D PMT9312_1815 rpl36; 50S Ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PMT9312_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMT9312_R0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMT9312_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pmi03009]
D PMT9312_1696 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMT9312_1377 GTP-binding protein Era K03595 era; GTPase
D PMT9312_1537 Small GTP-binding protein domain K03595 era; GTPase
D PMT9312_0220 GTP1/OBG family protein K03979 obgE; GTPase [EC:3.6.5.-]
D PMT9312_1585 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D PMT9312_0009 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D PMT9312_0207 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D PMT9312_0866 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PMT9312_0425 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PMT9312_1070 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PMT9312_0668 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PMT9312_1568 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PMT9312_0173 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PMT9312_1294 Protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PMT9312_1557 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PMT9312_0851 RNA methyltransferase TrmH, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PMT9312_0864 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PMT9312_0054 putative RNA methylase family UPF0020 K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D PMT9312_1574 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PMT9312_0195 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PMT9312_1204 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D PMT9312_1100 [SSU ribosomal protein S18P]-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PMT9312_0338 GCN5-related N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PMT9312_1698 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D PMT9312_0106 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PMT9312_1451 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PMT9312_1593 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMT9312_0799 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PMT9312_0850 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D PMT9312_1112 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMT9312_0019 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PMT9312_0387 Small GTP-binding protein domain K03977 engA; GTPase
D PMT9312_0196 Ras superfamily GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D PMT9312_0325 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PMT9312_0193 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PMT9312_0115 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PMT9312_1584 Protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D PMT9312_0972 RNA-binding S4 K14761 rlbA; ribosome-associated protein
D PMT9312_0977 Iojap-related protein K09710 ybeB; ribosome-associated protein
D PMT9312_0184 Protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D PMT9312_1234 conserved hypothetical protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:pmi03016]
D PMT9312_1447 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PMT9312_0143 poly A polymerase family K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PMT9312_0473 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMT9312_0509 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMT9312_0240 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMT9312_0911 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMT9312_0934 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMT9312_0189 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMT9312_1711 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMT9312_1781 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMT9312_0045 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMT9312_0597 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMT9312_1289 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMT9312_1237 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMT9312_1775 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMT9312_0623 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMT9312_1364 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMT9312_0930 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMT9312_1427 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMT9312_0598 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PMT9312_0069 HIT (histidine triad) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PMT9312_0242 conserved hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PMT9312_1626 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PMT9312_1445 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PMT9312_0913 cysteine desulfurase (class-V aminotransferase family)-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMT9312_0172 nifS-like aminotransferase class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMT9312_0325 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PMT9312_1728 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PMT9312_0191 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PMT9312_1767 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PMT9312_0304 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PMT9312_1293 CysQ protein-like protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PMT9312_1285 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PMT9312_R0043 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D PMT9312_0933 putative ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D PMT9312_1676 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PMT9312_1265 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMT9312_0767 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMT9312_0882 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PMT9312_0014 tRNA-U16,U17-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PMT9312_1019 Dihydrouridine synthase TIM-barrel protein nifR3 K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PMT9312_1401 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PMT9312_1067 RNA methyltransferase TrmH, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D PMT9312_1127 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PMT9312_1376 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PMT9312_0418 tRNA (guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D PMT9312_0939 putative tRNA/rRNA methyltransferase (SpoU family) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PMT9312_1395 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D PMT9312_1387 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PMT9312_0119 HesB/YadR/YfhF K13628 iscA; iron-sulfur cluster assembly protein
D PMT9312_0278 conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D PMT9312_0384 putative tRNA-(MS(2)IO(6)A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D PMT9312_0401 queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PMT9312_1784 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PMT9312_0110 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PMT9312_0579 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PMT9312_1783 organic radical activating enzyme-like protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PMT9312_1554 conserved hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PMT9312_0007 conserved hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PMT9312_0875 Rhodanese-like protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D PMT9312_0273 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PMT9312_1743 conserved hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PMT9312_0141 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PMT9312_0470 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PMT9312_1719 Protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PMT9312_0953 RNA binding S1 K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMT9312_1292 RNA binding S1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pmi03012]
D PMT9312_0167 translation initiation factor 1 (eIF-1/SUI1) K03113 EIF1; translation initiation factor 1
D PMT9312_1587 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D PMT9312_1729 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D PMT9312_0093 ATPase K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PMT9312_0762 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D PMT9312_1600 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D PMT9312_1601 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D PMT9312_1622 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D PMT9312_0521 ribosome recycling factor K02838 frr; ribosome recycling factor
D PMT9312_0324 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PMT9312_0252 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PMT9312_1248 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D PMT9312_0026 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D PMT9312_0182 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D PMT9312_0663 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3
D PMT9312_0357 class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pmi03110]
D PMT9312_0580 ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PMT9312_0209 ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PMT9312_1099 ATPase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PMT9312_1749 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PMT9312_0899 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PMT9312_1797 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D PMT9312_0903 molecular chaperone DnaK, heat shock protein HSP70 K04043 dnaK; molecular chaperone DnaK
D PMT9312_1529 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMT9312_0451 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMT9312_0125 Heat shock protein DnaJ-like protein K03686 dnaJ; molecular chaperone DnaJ
D PMT9312_0017 Heat shock protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PMT9312_0904 Heat shock protein DnaJ-like protein K05516 cbpA; curved DNA-binding protein
D PMT9312_0665 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D PMT9312_0016 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PMT9312_1530 groES protein K04078 groES; chaperonin GroES
D PMT9312_0946 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMT9312_0228 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMT9312_0751 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMT9312_1358 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMT9312_1549 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMT9312_1254 cyclophilin-type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PMT9312_0906 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PMT9312_1072 thioredoxin K03671 TXN; thioredoxin
D PMT9312_0181 Glutaredoxin, GrxC K03676 grxC; glutaredoxin 3
D PMT9312_1122 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
C 04131 Membrane trafficking [BR:pmi04131]
D PMT9312_0047 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMT9312_0951 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D PMT9312_0888 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMT9312_0899 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:pmi04121]
C 03051 Proteasome [BR:pmi03051]
D PMT9312_0899 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pmi03032]
D PMT9312_0202 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PMT9312_0378 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PMT9312_1419 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D PMT9312_0565 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PMT9312_1766 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMT9312_0860 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PMT9312_1716 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMT9312_0854 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMT9312_0001 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMT9312_1739 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMT9312_0131 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMT9312_0621 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMT9312_1750 DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMT9312_1594 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PMT9312_0694 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMT9312_0005 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PMT9312_1074 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PMT9312_1727 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PMT9312_0435 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pmi03036]
D PMT9312_0378 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PMT9312_1696 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMT9312_1419 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D PMT9312_0904 Heat shock protein DnaJ-like protein K05516 cbpA; curved DNA-binding protein
D PMT9312_0565 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PMT9312_0059 condensin subunit Smc K03529 smc; chromosome segregation protein
D PMT9312_0153 conserved hypothetical protein K05896 scpA; segregation and condensation protein A
D PMT9312_0891 condensin subunit ScpB K06024 scpB; segregation and condensation protein B
D PMT9312_0518 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMT9312_1404 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PMT9312_1551 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PMT9312_1405 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PMT9312_0616 Cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMT9312_0328 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D PMT9312_0327 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D PMT9312_0326 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D PMT9312_0391 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D PMT9312_1715 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D PMT9312_1714 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PMT9312_1672 rod shape determining protein K05837 rodA; rod shape determining protein RodA
D PMT9312_0052 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D PMT9312_1767 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PMT9312_1568 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PMT9312_1127 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PMT9312_1673 MRP protein-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:pmi03400]
D PMT9312_0287 deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PMT9312_1458 deoxyribodipyrimidine photo-lyase family protein (cryptochrome) K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PMT9312_0810 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PMT9312_0423 conserved hypothetical protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D PMT9312_0675 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PMT9312_0334 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PMT9312_0485 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PMT9312_0694 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMT9312_1804 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PMT9312_1741 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PMT9312_0918 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PMT9312_0306 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMT9312_1578 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMT9312_1576 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMT9312_1577 DNA-directed RNA polymerase gamma chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMT9312_1628 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMT9312_1524 putative DNA-directed RNA polymerase (omega chain) K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PMT9312_0961 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PMT9312_1737 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PMT9312_0219 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D PMT9312_0854 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMT9312_0001 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMT9312_1739 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMT9312_0131 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMT9312_0621 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMT9312_1750 DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMT9312_1716 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMT9312_0372 T/G mismatch-specific endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D PMT9312_1114 DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PMT9312_1116 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PMT9312_1113 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PMT9312_1654 RecA protein K03553 recA; recombination protein RecA
D PMT9312_0857 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PMT9312_1708 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PMT9312_1065 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PMT9312_0498 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PMT9312_0135 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PMT9312_1665 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PMT9312_0764 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PMT9312_0394 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PMT9312_1108 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D PMT9312_1805 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PMT9312_1155 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D PMT9312_0005 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PMT9312_1074 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PMT9312_1727 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PMT9312_0435 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PMT9312_1419 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D PMT9312_0862 DNA-directed DNA polymerase K03502 umuC; DNA polymerase V
D PMT9312_0863 SOS response UmuD protein, Serine peptidase, MEROPS family S24 K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PMT9312_1356 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PMT9312_1656 conserved hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PMT9312_0732 DEAD/DEAH box helicase-like protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
C 03029 Mitochondrial biogenesis [BR:pmi03029]
D PMT9312_1587 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D PMT9312_1729 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D PMT9312_0762 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D PMT9312_1600 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D PMT9312_1601 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D PMT9312_1377 GTP-binding protein Era K03595 era; GTPase
D PMT9312_1537 Small GTP-binding protein domain K03595 era; GTPase
D PMT9312_1427 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMT9312_0911 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMT9312_1781 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMT9312_0189 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMT9312_0853 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PMT9312_0049 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PMT9312_0237 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PMT9312_1716 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMT9312_1436 outer envelope membrane protein-like protein K07277 SAM50; outer membrane protein insertion porin family
D PMT9312_1797 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D PMT9312_0903 molecular chaperone DnaK, heat shock protein HSP70 K04043 dnaK; molecular chaperone DnaK
D PMT9312_0016 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PMT9312_1529 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMT9312_0451 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMT9312_1530 groES protein K04078 groES; chaperonin GroES
D PMT9312_0125 Heat shock protein DnaJ-like protein K03686 dnaJ; molecular chaperone DnaJ
D PMT9312_0017 Heat shock protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PMT9312_0913 cysteine desulfurase (class-V aminotransferase family)-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMT9312_0172 nifS-like aminotransferase class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMT9312_1122 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D PMT9312_1673 MRP protein-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PMT9312_0447 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PMT9312_0446 cytochrome c oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PMT9312_1287 putative inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMT9312_0483 SPFH domain, Band 7 family protein K17081 PHB2; prohibitin 2
D PMT9312_0899 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pmi02000]
D PMT9312_0845 ATPase K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMT9312_0561 ATPase K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMT9312_1332 ATPase K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D PMT9312_1182 ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D PMT9312_0973 ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PMT9312_1110 ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PMT9312_0067 ATPase K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D PMT9312_1261 putative iron ABC transporter, substrate binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMT9312_0490 putative iron ABC transporter K02011 afuB; iron(III) transport system permease protein
D PMT9312_0811 ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMT9312_0291 putative ABC transporter K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PMT9312_1422 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PMT9312_0292 ATPase K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PMT9312_0722 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D PMT9312_0727 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein
D PMT9312_0728 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein
D PMT9312_0729 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PMT9312_0673 Phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D PMT9312_0671 putative phosphonate ABC transporter K02042 phnE; phosphonate transport system permease protein
D PMT9312_0672 ATPase K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PMT9312_1168 amino acid ABC transporter substrate-binding protein, PAAT family K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PMT9312_1167 amino acid ABC transporter membrane protein 1, PAAT family K09970 aapQ; general L-amino acid transport system permease protein
D PMT9312_1166 amino acid ABC transporter membrane protein 2, PAAT family K09971 aapM; general L-amino acid transport system permease protein
D PMT9312_1165 amino acid ABC transporter ATP-binding protein, PAAT family K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PMT9312_0829 urea-binding protein K11959 urtA; urea transport system substrate-binding protein
D PMT9312_0828 urea ABC transporter membrane protein K11960 urtB; urea transport system permease protein
D PMT9312_0827 urea ABC transporter membrane protein K11961 urtC; urea transport system permease protein
D PMT9312_0826 urea ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D PMT9312_0825 urea ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D PMT9312_1060 ABC transporter, substrate binding protein, possibly oligopeptides K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMT9312_1059 putative ABC transporter, oligopeptides K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMT9312_0417 putative ABC transporter, oligopeptides K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMT9312_0194 ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMT9312_0816 ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PMT9312_0601 ABC transporter, substrate binding protein, possibly Mn K11601 mntC; manganese transport system substrate-binding protein
D PMT9312_0603 ABC transporter component, possibly Mn transport K11602 mntB; manganese transport system permease protein
D PMT9312_0602 ATPase K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D PMT9312_0886 biotin synthase K03523 bioY; biotin transport system substrate-specific component
D PMT9312_0388 cobalt transport protein-like protein K16785 ecfT; energy-coupling factor transport system permease protein
D PMT9312_0128 ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PMT9312_0666 ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PMT9312_1043 ABC transporter, substrate binding protein, possibly Mn K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PMT9312_1040 ABC transporter component, possibly Mn transport K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D PMT9312_1042 ATPase K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D PMT9312_1482 permease-like protein K11720 lptG; lipopolysaccharide export system permease protein
D PMT9312_0772 ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PMT9312_0983 conserved membrane protein, multidrug efflux associated K25154 evrC; viologen exporter family transport system permease protein
D PMT9312_0982 putative multidrug efflux ABC transporter K25155 evrB; viologen exporter family transport system permease protein
D PMT9312_0981 ATPase K25156 evrA; viologen exporter family transport system ATP-binding protein
D PMT9312_0449 putative multidrug efflux ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PMT9312_0448 ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PMT9312_0887 ABC transporter-like protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PMT9312_0757 DevC protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PMT9312_0433 ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PMT9312_0758 ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PMT9312_0074 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PMT9312_0724 multidrug efflux transporter, MFS family K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D PMT9312_0715 putative potassium channel, VIC family K10716 kch; voltage-gated potassium channel
D PMT9312_0265 ammonium transporter K03320 amt; ammonium transporter, Amt family
D PMT9312_0113 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMT9312_0630 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMT9312_0566 conserved hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMT9312_0635 small mechanosensitive ion channel, MscS family K16052 ynaI; MscS family membrane protein
D PMT9312_1723 magnesium transporter K06213 mgtE; magnesium transporter
D PMT9312_1725 CRCB protein-like protein K06199 crcB; fluoride exporter
D PMT9312_1724 conserved hypothetical protein K06199 crcB; fluoride exporter
D PMT9312_1536 Protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMT9312_1375 polysaccharide export-related periplasmic protein K01991 wza; polysaccharide biosynthesis/export protein
D PMT9312_1436 outer envelope membrane protein-like protein K07277 SAM50; outer membrane protein insertion porin family
D PMT9312_0568 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D PMT9312_0628 sodium:solute symporter, ESS family-like protein K03312 gltS; glutamate:Na+ symporter, ESS family
D PMT9312_1692 sodium/proton antiporter NhaS3, CPA2 family K26730 napA; Na+:H+ antiporter
D PMT9312_0087 sodium transporter, trk family-like protein K03498 trkH; trk/ktr system potassium uptake protein
D PMT9312_0088 putative potassium channel, VIC family K03499 trkA; trk/ktr system potassium uptake protein
D PMT9312_1794 putative chloride channel K03281 clcA; chloride channel protein, CIC family
D PMT9312_0723 Chromate transporter K07240 chrA; chromate transporter
D PMT9312_0216 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PMT9312_0644 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PMT9312_0263 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D PMT9312_1276 ABC transporter family-like protein K24180 mleP; malate permease and related proteins
D PMT9312_1551 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PMT9312_0951 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D PMT9312_1274 conserved hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D PMT9312_1552 putative c-type cytochrome biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D PMT9312_1183 leukotoxin secretion protein-like protein K11003 hlyD; membrane fusion protein, hemolysin D
D PMT9312_1355 Uncharacterized protein involved in exopolysaccharide biosynthesis-like protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
C 02044 Secretion system [BR:pmi02044]
D PMT9312_1182 ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D PMT9312_1183 leukotoxin secretion protein-like protein K11003 hlyD; membrane fusion protein, hemolysin D
D PMT9312_1186 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PMT9312_1199 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D PMT9312_1201 Tfp pilus assembly protein PilE-like protein K02650 pilA; type IV pilus assembly protein PilA
D PMT9312_1189 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB-like protein K02652 pilB; type IV pilus assembly protein PilB
D PMT9312_1187 Type II secretory pathway component PulF-like protein K02653 pilC; type IV pilus assembly protein PilC
D PMT9312_1194 Type II secretory pathway component PulD-like protein K02666 pilQ; type IV pilus assembly protein PilQ
D PMT9312_1188 twitching motility protein K02669 pilT; twitching motility protein PilT
D PMT9312_0890 conserved hypothetical membrane protein K02221 yggT; YggT family protein
D PMT9312_0063 YGGT family, conserved hypothetical integral membrane protein K02221 yggT; YggT family protein
D PMT9312_0994 Helix-hairpin-helix DNA-binding, class 1 K02237 comEA; competence protein ComEA
D PMT9312_1732 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMT9312_0870 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PMT9312_0208 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D PMT9312_0871 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D PMT9312_1528 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D PMT9312_1632 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PMT9312_1382 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMT9312_0010 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PMT9312_1287 putative inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMT9312_1519 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D PMT9312_0350 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D PMT9312_0464 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pmi02042]
D PMT9312_1536 Protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:pmi02022]
D PMT9312_0718 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMT9312_0717 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PMT9312_1439 multi-sensor signal transduction histidine kinase K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3]
D PMT9312_1088 histidine kinase K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D PMT9312_0130 two component transcriptional regulator, winged helix family K10697 rpaA; two-component system, OmpR family, response regulator RpaA
D PMT9312_0136 two component transcriptional regulator, winged helix family K11329 rpaB; two-component system, OmpR family, response regulator RpaB
C 02035 Bacterial motility proteins [BR:pmi02035]
D PMT9312_1188 twitching motility protein K02669 pilT; twitching motility protein PilT
D PMT9312_1199 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D PMT9312_1201 Tfp pilus assembly protein PilE-like protein K02650 pilA; type IV pilus assembly protein PilA
D PMT9312_1189 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB-like protein K02652 pilB; type IV pilus assembly protein PilB
D PMT9312_1187 Type II secretory pathway component PulF-like protein K02653 pilC; type IV pilus assembly protein PilC
D PMT9312_1186 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PMT9312_1194 Type II secretory pathway component PulD-like protein K02666 pilQ; type IV pilus assembly protein PilQ
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pmi04812]
D PMT9312_1715 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D PMT9312_1405 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PMT9312_0328 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D PMT9312_0327 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D PMT9312_0326 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D PMT9312_0052 conserved hypothetical protein K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:pmi04147]
D PMT9312_0899 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PMT9312_0210 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMT9312_0197 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PMT9312_0888 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMT9312_1254 cyclophilin-type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PMT9312_0944 thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PMT9312_1529 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMT9312_0451 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMT9312_1797 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D PMT9312_0903 molecular chaperone DnaK, heat shock protein HSP70 K04043 dnaK; molecular chaperone DnaK
D PMT9312_0910 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMT9312_1073 IMP dehydrogenase related 2 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PMT9312_1600 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D PMT9312_0069 HIT (histidine triad) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PMT9312_0398 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMT9312_1267 macrophage migration inhibitory factor family K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
D PMT9312_1718 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PMT9312_1631 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PMT9312_1133 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PMT9312_0012 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMT9312_1800 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMT9312_0584 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PMT9312_0880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMT9312_0217 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PMT9312_0492 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PMT9312_1452 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMT9312_0268 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMT9312_1394 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMT9312_1085 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMT9312_0483 SPFH domain, Band 7 family protein K17081 PHB2; prohibitin 2
D PMT9312_0971 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:pmi02048]
D PMT9312_0378 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PMT9312_1405 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PMT9312_1715 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D PMT9312_0473 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMT9312_0913 cysteine desulfurase (class-V aminotransferase family)-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMT9312_0172 nifS-like aminotransferase class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:pmi04090]
C 01504 Antimicrobial resistance genes [BR:pmi01504]
D PMT9312_0769 D-Ala-D-Ala carboxypeptidase, Metallo peptidase, MEROPS family M15B K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PMT9312_0765 D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pmi03100]
D PMT9312_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMT9312_R0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMT9312_R0005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMT9312_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMT9312_R0042 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMT9312_R0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMT9312_R0003 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMT9312_R0016 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMT9312_R0041 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PMT9312_R0039 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMT9312_R0024 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMT9312_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMT9312_R0044 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMT9312_R0033 tRNA-His K14226 tRNA-His; tRNA His
D PMT9312_R0010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMT9312_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMT9312_R0002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMT9312_R0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMT9312_R0004 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMT9312_R0025 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMT9312_R0023 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMT9312_R0006 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMT9312_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMT9312_R0007 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PMT9312_R0026 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMT9312_R0020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMT9312_R0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMT9312_R0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMT9312_R0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMT9312_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMT9312_R0037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMT9312_R0014 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMT9312_R0008 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMT9312_R0017 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PMT9312_R0015 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PMT9312_R0036 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMT9312_R0045 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMT9312_R0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMT9312_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMT9312_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMT9312_R0034 ffs; SRP RNA K01983 ffs; SRP RNA
D PMT9312_R0043 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D PMT9312_R0001 ssrA; prediction based on tmRNA Website from Indiana University K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PMT9312_1303 Pyruvate dehydrogenase (lipoamide) K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D PMT9312_0533 conserved hypothetical protein K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]
D PMT9312_0725 glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D PMT9312_0996 conserved hypothetical protein K18208 RNLS; renalase [EC:1.6.3.5]
D PMT9312_1431 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PMT9312_0844 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PMT9312_0015 Methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PMT9312_0223 glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D PMT9312_0082 putative bacterioferritin comigratory (BCP) protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PMT9312_0897 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergens family protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PMT9312_0353 putative bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PMT9312_1463 Protein of unknown function DUF209 K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PMT9312_0282 retinal pigment epithelial membrane protein K00464 diox1; all-trans-8'-apo-beta-carotenal 15,15'-oxygenase [EC:1.13.11.75]
D PMT9312_1262 Prolyl 4-hydroxylase, alpha subunit K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D PMT9312_1764 Delta-9 acyl-phospholipid desaturase K23054 desC; sn-1 stearoyl-lipid 9-desaturase [EC:1.14.19.28]
D PMT9312_1390 putative nickel-containing superoxide dismutase precursor (NISOD) K00518 sodN; nickel superoxide dismutase [EC:1.15.1.1]
D PMT9312_0812 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D PMT9312_0513 conserved hypothetical protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PMT9312_0315 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D PMT9312_1388 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PMT9312_1001 Acetyltransferase, GNAT family K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D PMT9312_1372 putative circadian phase modifier CpmA K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D PMT9312_0460 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PMT9312_1791 hypothetical protein K18678 VTE5; phytol kinase [EC:2.7.1.182]
D PMT9312_1023 4-hydroxybenzoyl-CoA thioesterase family active site K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PMT9312_0639 glucosylglycerol phosphatase K05978 stpA; glucosylglycerol 3-phosphatase [EC:3.1.3.69]
D PMT9312_0797 HAD-superfamily phosphatase subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D PMT9312_1079 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D PMT9312_1579 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PMT9312_0070 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PMT9312_0615 nitrilase-like protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D PMT9312_0558 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PMT9312_0532 fatty aldehyde decarbonylase K14331 K14331; fatty aldehyde decarbonylase [EC:4.1.99.5]
D PMT9312_1386 Protein of unknown function UPF0031 K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PMT9312_1663 conserved hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D PMT9312_0488 Protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D PMT9312_0025 cyclophilin-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D PMT9312_1697 conserved hypothetical protein K00345 ndhS; NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [EC:7.1.1.-]
D PMT9312_0133 Heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D PMT9312_0264 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D PMT9312_1570 conserved hypothetical protein K05337 fer; ferredoxin
D PMT9312_0389 conserved hypothetical protein K14518 pipX; PII interaction protein X
D PMT9312_1272 Flavodoxin, long chain K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PMT9312_0410 putative L-cysteine/cystine lyase K11325 K11325; L-cysteine/cystine lyase
D PMT9312_0390 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PMT9312_0489 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D PMT9312_0786 putative cobalamin synthesis protein K02234 cobW; cobalamin biosynthesis protein CobW
C 99988 Secondary metabolism
D PMT9312_0042 reductase-like protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PMT9312_1486 conserved hypothetical protein K15977 K15977; putative oxidoreductase
D PMT9312_1457 conserved hypothetical protein K15977 K15977; putative oxidoreductase
D PMT9312_0267 conserved hypothetical protein K15977 K15977; putative oxidoreductase
D PMT9312_0269 putative esterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
D PMT9312_0734 conserved hypothetical protein K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D PMT9312_0940 conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PMT9312_1591 conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PMT9312_1747 trigger factor K03545 tig; trigger factor
D PMT9312_0832 urease accessory protein UreE K03187 ureE; urease accessory protein
D PMT9312_0831 urease accessory protein UreF K03188 ureF; urease accessory protein
D PMT9312_0830 urease accessory protein UreG K03189 ureG; urease accessory protein
D PMT9312_0833 urease accessory protein UreD K03190 ureD; urease accessory protein
D PMT9312_1709 SsrA-binding protein K03664 smpB; SsrA-binding protein
D PMT9312_1036 putative stress-induced protein OsmC K07397 yhfA; putative redox protein
D PMT9312_1553 putative C-type cytochrome biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D PMT9312_0691 conserved hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D PMT9312_0080 Recombination protein MgsA K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D PMT9312_0020 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PMT9312_1421 putative GPH family sugar transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D PMT9312_1223 Na+-dependent transporter of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D PMT9312_0770 GTP-binding protein TypA K06207 typA; GTP-binding protein
D PMT9312_1380 phoH-like phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PMT9312_1494 Nucleotide binding protein, PINc K07175 phoH2; PhoH-like ATPase
D PMT9312_1441 circadian oscillation regulator KaiB-like protein K08481 kaiB; circadian clock protein KaiB
D PMT9312_1440 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
D PMT9312_0481 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D PMT9312_0756 ABC transporter component-like protein K02005 ABC.CD.TX; HlyD family secretion protein
D PMT9312_1235 Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D PMT9312_0505 cutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PMT9312_0075 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PMT9312_0073 ABC transporter, membrane component K09015 sufD; Fe-S cluster assembly protein SufD
D PMT9312_0099 serum resistance locus BrkB-like protein K07058 K07058; membrane protein
D PMT9312_1063 conserved hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D PMT9312_1105 Rhodanese-like protein K07146 K07146; UPF0176 protein
D PMT9312_1618 putative imidazoleglycerol-phosphate dehydratase K11777 K11777; HAD superfamily phosphatase
D PMT9312_0254 photosystem II reaction centre N protein (psbN) K02715 psbN; PsbN protein
D PMT9312_1465 conserved hypothetical protein K08983 K08983; putative membrane protein
C 99997 Function unknown
D PMT9312_0479 conserved hypothetical protein K06873 K06873; uncharacterized protein
D PMT9312_0884 Small GTP-binding protein domain K06883 K06883; uncharacterized protein
D PMT9312_0329 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D PMT9312_1379 conserved hypothetical protein K06890 K06890; uncharacterized protein
D PMT9312_0807 conserved hypothetical protein K06934 K06934; uncharacterized protein
D PMT9312_0950 conserved hypothetical protein K06940 K06940; uncharacterized protein
D PMT9312_0731 serine/threonine specific protein phosphatase K06953 K06953; uncharacterized protein
D PMT9312_0585 conserved hypothetical protein K06978 K06978; uncharacterized protein
D PMT9312_1469 conserved hypothetical protein K06995 K06995; uncharacterized protein
D PMT9312_1241 conserved hypothetical protein K07019 K07019; uncharacterized protein
D PMT9312_0123 conserved hypothetical protein K07071 K07071; uncharacterized protein
D PMT9312_1569 aldo/keto reductase family K07079 K07079; uncharacterized protein
D PMT9312_0440 aldo/keto reductase family K07079 K07079; uncharacterized protein
D PMT9312_0215 putative sodium-dependent bicarbonate transporter K07086 K07086; uncharacterized protein
D PMT9312_0986 conserved hypothetical protein K07090 K07090; uncharacterized protein
D PMT9312_1518 twin-arginine translocation pathway signal sequence domain protein K07093 K07093; uncharacterized protein
D PMT9312_0991 putative purine phosphoribosyltransferase related protein K07101 K07101; uncharacterized protein
D PMT9312_0033 conserved hypothetical protein K07120 K07120; uncharacterized protein
D PMT9312_0406 Protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D PMT9312_0364 conserved hypothetical protein K09705 K09705; uncharacterized protein
D PMT9312_0771 conserved hypothetical protein K09763 K09763; uncharacterized protein
D PMT9312_1082 conserved hypothetical protein K09775 K09775; uncharacterized protein
D PMT9312_0574 conserved hypothetical protein K09780 K09780; uncharacterized protein
D PMT9312_0370 putative periplasmic protein K09797 K09797; uncharacterized protein
D PMT9312_0108 conserved hypothetical protein K09919 K09919; uncharacterized protein
D PMT9312_0192 conserved hypothetical protein K09928 K09928; uncharacterized protein
D PMT9312_0564 conserved hypothetical protein K09931 K09931; uncharacterized protein
D PMT9312_0077 conserved hypothetical protein K09942 K09942; uncharacterized protein
D PMT9312_0925 conserved hypothetical protein K09966 K09966; uncharacterized protein
D PMT9312_1586 conserved hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 9, 2024