+D GENES KO
#
KEGG Orthology (KO) - Proteus mirabilis HI4320
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pmr00010]
D PMI2754 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMI3203 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMI3397 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMI1524 glpX; fructose-1,6-bisphosphatase class II (D-fructose-1,6-bisphosphate 1-phosphohydrolase class II) K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMI1592 fbaB; fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMI0243 fbaA; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMI3205 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMI1504 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMI0242 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PMI0590 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMI3716 gpmB; probable phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMI0221 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMI2409 putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI1155 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI1405 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI1421 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PMI2046 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMI2045 aceF; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMI2044 lpdA; dihydrolipoyl dehydrogenase (glycine cleavage system L protein) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMI0450 adhC; alcohol dehydrogenase (glutathione-dependent formaldehyde dehydrogenase) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMI1486 adhE; aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating), pyruvate-formate-lyase deactivase] K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMI0657 probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMI3037 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMI1948 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PMI2875 putative hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D PMI0548 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMI1505 putative aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PMI3015 pckA; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PMI2952 chbF; 6-phospho-beta-glucosidase (cellobiose-6-phosphate hydrolase) K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PMI1830 crr; PTS family enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMI2292 ptsG; glucose-specific PTS system, EIIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PMI2982 PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 00020 Citrate cycle (TCA cycle) [PATH:pmr00020]
D PMI0564 gltA; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D PMI1320 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PMI2040 acnB; aconitate hydratase 2 (citrate hydro-lyase 2) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMI0891 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PMI0569 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PMI0570 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PMI2044 lpdA; dihydrolipoyl dehydrogenase (glycine cleavage system L protein) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMI0572 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PMI0571 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PMI0567 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMI0568 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMI0565 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PMI0566 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PMI3588 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMI3587 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMI3586 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMI3585 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMI1296 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PMI3400 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMI1931 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PMI3015 pckA; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PMI2046 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMI2045 aceF; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pmr00030]
D PMI2754 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMI1157 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMI0601 pgl; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PMI0655 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PMI3030 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMI0240 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMI0006 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PMI2032 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PMI2529 rpiB; putative ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PMI2416 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PMI3512 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PMI3049 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PMI3513 deoK; deoxyribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PMI0089 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PMI1528 putative carbohydrate kinase/trancriptional regulator K00852 rbsK; ribokinase [EC:2.7.1.15]
D PMI2414 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PMI0548 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMI1083 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PMI2760 edd; 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D PMI2761 eda; KHG/KDPG aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro-3-deoxy-phosphogluconate aldolase] K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMI2147 eda; putative Khg/KdpG aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMI1532 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D PMI1773 gcd; quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D PMI1952 tkrA; 2-ketogluconate reductase (2-ketoaldonate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PMI2673 gntK; thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D PMI2146 kdgK; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PMI1592 fbaB; fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMI0243 fbaA; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMI3397 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMI1524 glpX; fructose-1,6-bisphosphatase class II (D-fructose-1,6-bisphosphate 1-phosphohydrolase class II) K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMI3203 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:pmr00040]
D PMI2367 conserved hypothetical protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D PMI2133 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D PMI2132 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D PMI3189 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMI1490 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMI3102 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMI3030 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMI1272 xylB; xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D PMI1273 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D PMI2941 probable carbohydrate kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:pmr00051]
D PMI2189 cscK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PMI3203 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMI3397 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMI1524 glpX; fructose-1,6-bisphosphatase class II (D-fructose-1,6-bisphosphate 1-phosphohydrolase class II) K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMI2157 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PMI1273 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D PMI1592 fbaB; fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMI0243 fbaA; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMI3205 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMI2529 rpiB; putative ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PMI1768 putative phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D PMI1021 putative phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C 00052 Galactose metabolism [PATH:pmr00052]
D PMI1948 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PMI1949 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PMI1950 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PMI1951 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMI1490 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMI3102 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMI0548 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMI3203 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMI2145 gatY; putative tagatose-1,6-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D PMI2140 agaZ; putative tagatose 6-phosphate kinase K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D PMI2190 cscA; sucrose-6-phosphate hydrolase (sucrase) (invertase) K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PMI2135 agaF; putative N-acetylgalactosamine-specific PTS system, EIIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PMI2138 agaV; putative N-acetylgalactosamine-specific PTS system, EIIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D PMI2137 agaW; putative N-acetylgalactosamine-specific PTS system, EIIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D PMI2136 agaD; putative N-acetylgalactosamine-specific PTS system, EIID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D PMI2134 agaA; N-acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PMI2139 agaS; putative tagatose-6-phosphate ketose/aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:pmr00053]
D PMI3189 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMI3188 wbnF; nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PMI1489 wbnF; probable nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PMI1777 PTS system EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PMI1776 PTS system EIIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D PMI1775 putative PTS system EIIC component K03475 ulaA; ascorbate PTS system EIIC component
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:pmr00500]
D PMI3515 PTS system EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PMI2190 cscA; sucrose-6-phosphate hydrolase (sucrase) (invertase) K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PMI1490 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMI3102 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMI3097 putative cellulose synthase catalytic subunit [UDP-forming] K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D PMI2099 bcsA; cellulose synthase catalytic subunit [UDP-forming] K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D PMI2954 chbA; N,N'-diacetylchitobiose-specific PTS system, EIIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PMI2956 chbB; N,N'-diacetylchitobiose-specific PTS system, EIIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PMI2955 chbC; N,N'-diacetylchitobiose-specific PTS system, EIIC component K02761 celB; cellobiose PTS system EIIC component
D PMI2952 chbF; 6-phospho-beta-glucosidase (cellobiose-6-phosphate hydrolase) K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PMI0289 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D PMI1830 crr; PTS family enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMI2982 PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D PMI0291 treB; trehalose-specific PTS system, EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D PMI0548 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMI2754 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMI2189 cscK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pmr00520]
D PMI0873 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PMI1830 crr; PTS family enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMI0455 nagE; N-acetylglucosamine-specific PTS system, EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PMI3095 ROK-family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D PMI0453 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PMI0454 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PMI2189 cscK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PMI3067 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMI3414 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PMI3066 glmU; bifunctional protein GlmU [includes: UDP-N-acetylglucosamine pyrophosphorylase and glucosamine-1-phosphate N-acetyltransferase] K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PMI3138 putative phosphosugar binding/isomerase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PMI3514 putative phosphosugar binding/isomerase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PMI1388 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PMI3661 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMI3248 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMI2977 nanK; putative N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D PMI2978 nanE; putative N-acetylmannosamine-6-phosphate 2-epimerase (ec 5.1.3.9) (mannac-6-p epimerase) K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D PMI2973 putative N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D PMI3318 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PMI3319 rffD; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PMI1045 arnA; bifunctional polymyxin resistance protein [includes: UDP-glucuronic acid decarboxylase and UDP-4-amino-4-deoxy-l-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D PMI1043 arnB; UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D PMI1044 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D PMI1046 putative polysaccharide deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D PMI2292 ptsG; glucose-specific PTS system, EIIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PMI2982 PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D PMI0548 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMI1490 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMI3102 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMI3189 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMI1949 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PMI1950 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PMI1951 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMI3188 wbnF; nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PMI1489 wbnF; probable nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PMI2754 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:pmr00620]
D PMI3037 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMI2046 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMI2045 aceF; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMI2044 lpdA; dihydrolipoyl dehydrogenase (glycine cleavage system L protein) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMI0705 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PMI2719 putative aldehyde-alcohol dehydrogenase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D PMI1486 adhE; aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating), pyruvate-formate-lyase deactivase] K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMI0657 probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D PMI0450 adhC; alcohol dehydrogenase (glutathione-dependent formaldehyde dehydrogenase) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMI1771 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PMI1772 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMI2713 pduL; putative propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D PMI2409 putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI1155 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI1405 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI2269 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMI1252 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMI3628 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMI3627 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMI1787 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMI3559 putative bifunctional acetyl-/propionyl-coenzyme A carboxylase alpha chain [includes: biotin carboxylase and biotin carboxyl carrier protein] K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PMI0793 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMI3235 poxB; pyruvate dehydrogenase [cytochrome] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D PMI1181 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D PMI0847 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D PMI1392 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PMI0225 gloB; putative hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PMI0732 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PMI1094 putative 2-hydroxyacid dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PMI1952 tkrA; 2-ketogluconate reductase (2-ketoaldonate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PMI0642 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PMI1552 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PMI3400 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMI1931 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PMI1296 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PMI3588 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMI3587 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMI3586 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMI3585 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMI3227 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PMI3015 pckA; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PMI1421 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PMI2764 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D PMI2084 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pmr00630]
D PMI2763 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D PMI3037 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMI2764 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D PMI3400 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMI0564 gltA; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D PMI1320 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PMI2040 acnB; aconitate hydratase 2 (citrate hydro-lyase 2) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMI3559 putative bifunctional acetyl-/propionyl-coenzyme A carboxylase alpha chain [includes: biotin carboxylase and biotin carboxyl carrier protein] K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PMI1740 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D PMI1094 putative 2-hydroxyacid dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PMI1952 tkrA; 2-ketogluconate reductase (2-ketoaldonate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PMI3031 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PMI2882 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMI1867 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMI2019 gcvP; glycine dehydrogenase [decarboxylating] (glycine cleavage system P-protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PMI2021 gcvT; aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMI2044 lpdA; dihydrolipoyl dehydrogenase (glycine cleavage system L protein) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMI2020 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PMI3609 garK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PMI2761 eda; KHG/KDPG aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro-3-deoxy-phosphogluconate aldolase] K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMI2147 eda; putative Khg/KdpG aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMI3110 fdoG; formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PMI3109 fdoH; formate dehydrogenase-O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PMI3108 fdoI; formate dehydrogenase-O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PMI1493 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pmr00640]
D PMI3037 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMI1771 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PMI1772 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMI2713 pduL; putative propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D PMI2044 lpdA; dihydrolipoyl dehydrogenase (glycine cleavage system L protein) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMI0705 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PMI3630 possible zinc-binding dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D PMI3550 fadB; fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase] K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMI1807 fadJ; fatty acid oxidation complex alpha subunit [includes: enoyl-coa hydratase and 3-hydroxyacyl-coa dehydrogenase] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMI2269 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMI1252 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMI3628 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMI3627 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMI1787 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMI3559 putative bifunctional acetyl-/propionyl-coenzyme A carboxylase alpha chain [includes: biotin carboxylase and biotin carboxyl carrier protein] K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PMI0571 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PMI0572 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PMI2040 acnB; aconitate hydratase 2 (citrate hydro-lyase 2) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMI0790 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D PMI0025 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D PMI3595 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PMI2766 putative glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:pmr00650]
D PMI3550 fadB; fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase] K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMI1807 fadJ; fatty acid oxidation complex alpha subunit [includes: enoyl-coa hydratase and 3-hydroxyacyl-coa dehydrogenase] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMI2719 putative aldehyde-alcohol dehydrogenase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D PMI1486 adhE; aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating), pyruvate-formate-lyase deactivase] K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMI0567 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMI0568 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMI0565 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PMI0566 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PMI3588 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMI3587 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMI3586 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMI3585 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMI1407 gadB; glutamate decarboxylase beta K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PMI3383 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMI0705 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PMI3299 ilvG; Acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI3519 ilvB; acetolactate synthase isozyme I large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI1058 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI3520 ilvN; acetolactate synthase isozyme I small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMI3300 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PMI1059 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D PMI2092 budC; acetoin(diacetyl) reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:pmr00660]
D PMI3299 ilvG; Acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI3519 ilvB; acetolactate synthase isozyme I large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI1058 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI3520 ilvN; acetolactate synthase isozyme I small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMI3300 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PMI1059 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D PMI0571 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PMI0572 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PMI2086 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PMI2087 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PMI2085 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pmr00562]
D PMI1863 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PMI3205 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pmr00190]
D PMI1762 nuoA; NADH-quinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PMI1761 nuoB; NADH-quinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PMI1760 nuoC; NADH-quinone oxidoreductase chain C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D PMI1759 nuoE; NADH-quinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PMI1758 nuoF; NADH-quinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PMI1757 nuoG; NADH-quinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PMI1756 nuoH; NADH-quinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PMI1755 nuoI; NADH-quinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PMI1754 nuoJ; NADH-quinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PMI1753 nuoK; NADH-quinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PMI1752 nuoL; NADH-quinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PMI1751 nuoM; NADH-quinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PMI1750 nuoN; NADH-quinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PMI0875 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PMI0567 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMI0568 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMI0565 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PMI0566 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PMI3588 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMI3587 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMI3586 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMI3585 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMI0105 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PMI0105A cyoD; cytochrome O ubiquinol oxidase protein K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D PMI0106 cyoC; cytochrome O ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D PMI0107 cyoB; cytochrome O ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D PMI0108 cyoA; cytochrome O ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D PMI0573 cydA; cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMI2377 putative cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMI1434 cytochrome oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMI0574 cydB; cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMI2376 cytochrome bd ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMI1435 cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMI0575 putative membrane protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D PMI3062 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PMI3064 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PMI3063 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PMI3061 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PMI3065 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PMI3058 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMI3060 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMI3059 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PMI3396 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PMI1578 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:pmr00680]
D PMI0450 adhC; alcohol dehydrogenase (glutathione-dependent formaldehyde dehydrogenase) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMI0449 putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D PMI3110 fdoG; formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PMI3109 fdoH; formate dehydrogenase-O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PMI3108 fdoI; formate dehydrogenase-O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PMI3577 fdhF; formate dehydrogenase-H, selenopolypeptide subunit K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D PMI2979 fdhF; formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D PMI1867 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMI0221 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMI3227 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PMI3400 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMI1592 fbaB; fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMI0243 fbaA; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMI3397 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMI1524 glpX; fructose-1,6-bisphosphatase class II (D-fructose-1,6-bisphosphate 1-phosphohydrolase class II) K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMI3203 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMI1771 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PMI1772 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMI3037 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMI1421 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PMI0590 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMI3716 gpmB; probable phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMI2031 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMI0711 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PMI2507 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pmr00910]
D PMI3570 narK; nitrite extrusion protein (MFS-family transporter) K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PMI3571 narG; respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PMI3572 narH; respiratory nitrate reductase 1 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PMI3574 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PMI1479 nirB; nitrite reductase [NAD(P)H] large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D PMI1478 nirD; nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D PMI2112 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D PMI3008 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PMI2882 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMI3677 gltB; glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PMI3676 gltD; glutamate synthase (NADPH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PMI2199 arcC; putative carbamate K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PMI0161 can; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pmr00920]
D PMI1835 cysP; sulfate/thiosulfate ABC transporter, thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PMI3204 sbp; sulfate-binding protein (sulfate starvation-induced protein) K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PMI1834 cysT; sulfate/thiosulfate ABC transporter, permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D PMI1833 cysW; sulfate/thiosulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D PMI1832 cysA; sulfate/thiosulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PMI2245 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PMI2246 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PMI2244 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PMI3385 cysQ; inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PMI2248 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PMI2250 cysJ; sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D PMI2249 cysI; sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D PMI2256 putative oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D PMI1681 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D PMI1683 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D PMI1682 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D PMI1814 phsA; thiosulfate reductase precursor K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D PMI0066 putative oxidoreductase, cytochrome b subunit K08354 phsC; thiosulfate reductase cytochrome b subunit
D PMI1816 phsC; thiosulfate reductase cytochrome b subunit K08354 phsC; thiosulfate reductase cytochrome b subunit
D PMI0623 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PMI2927 glpE; thiosulfate sulfurtransferase (putative gluconate metabolism protein) K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D PMI3185 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PMI3186 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PMI1827 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMI2765 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PMI3223 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMI1705 dmsA; dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D PMI1706 dmsB; anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D PMI1707 dmsC; anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pmr00061]
D PMI2269 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMI1252 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMI3628 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMI3627 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMI1787 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMI3559 putative bifunctional acetyl-/propionyl-coenzyme A carboxylase alpha chain [includes: biotin carboxylase and biotin carboxyl carrier protein] K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PMI0862 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D PMI2910 putative acyl carrier protein K02078 acpP; acyl carrier protein
D PMI0860 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMI2902 putative transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMI0859 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PMI1795 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMI0754 putative exported protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMI0863 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMI0861 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI3202 probable short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI2912 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI0782 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PMI2274 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMI1383 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMI2081 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMI1166 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pmr00071]
D PMI1808 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMI3549 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMI3550 fadB; fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase] K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMI1807 fadJ; fatty acid oxidation complex alpha subunit [includes: enoyl-coa hydratase and 3-hydroxyacyl-coa dehydrogenase] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMI0348 fadE; acyl-coenzyme A dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D PMI2081 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMI1166 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMI0372 aas; Aas bifunctional protein [includes: 2-acylglycerophosphoethanolamine acyltransferase and acyl-[acyl-carrier-protein] synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PMI0450 adhC; alcohol dehydrogenase (glutathione-dependent formaldehyde dehydrogenase) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMI1486 adhE; aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating), pyruvate-formate-lyase deactivase] K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMI0657 probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pmr00561]
D PMI3609 garK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMI2402 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D PMI1231 dhaK1; dihydroxyacetone kinase (glycerone kinase), kinase subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D PMI1232 dhaK2; dihydroxyacetone kinase, phosphatase subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D PMI2403 dhaL; PTS-dependent dihydroxyacetone kinase, ADP-binding subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D PMI2404 dhaM; PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit [includes: phosphocarrier protein Hpr and phosphotransferase enzyme IIa component] K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D PMI3595 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PMI2766 putative glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PMI3210 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PMI2751 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PMI0858 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PMI2364 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMI2343 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PMI2750 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PMI0999 putative lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:pmr00564]
D PMI3184 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PMI3592 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PMI2930 glpD; aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PMI3593 glpB; anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D PMI3594 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D PMI2751 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PMI2364 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMI2343 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PMI2750 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PMI3344 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D PMI3346 pldB; lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D PMI3590 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PMI3618 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PMI0372 aas; Aas bifunctional protein [includes: 2-acylglycerophosphoethanolamine acyltransferase and acyl-[acyl-carrier-protein] synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PMI2195 putative cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PMI2279 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PMI0397 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PMI3355 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PMI1520 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PMI1316 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D PMI2382 putative phosphotransferase/phosphoserine phosphatase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D PMI1357 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:pmr00565]
D PMI3344 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D PMI3344 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D PMI3344 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:pmr00592]
D PMI3344 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D PMI1808 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMI3549 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:pmr01040]
D PMI2167 tesA; acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PMI0128 tesB; acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PMI1354 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pmr00230]
D PMI2348 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PMI3019 nudE; ADP compounds hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D PMI2414 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PMI0548 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMI1083 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PMI1783 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PMI2769 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PMI1576 purN; phosphoribosylglycinamide formyltransferase (5'-phosphoribosylglycinamide transformylase) K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PMI2187 purT; phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PMI1875 purL; phosphoribosylformylglycineamide synthetase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PMI1575 purM; phosphoribosylformylglycinamidine cyclo-ligase (phosphoribosyl-aminoimidazole synthetase) K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PMI2162 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PMI2161 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PMI1562 purC; phosphoribosylaminoimidazole-succinocarboxamide synthetase (SAICAR synthetase) K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PMI2981 putative lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PMI0886 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PMI2768 purH; bifunctional purine biosynthesis protein [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase] K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMI0138 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PMI0047 putative secreted 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PMI2177 ushA; protein UshA precursor [includes: UDP-sugar hydrolase and 5'-nucleotidase] K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PMI2239 surE; multifunctional protein SurE (stationary-phase survival protein SurE) [includes: 5'/3'-nucleotidase and exopolyphosphatase] K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMI2181 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D PMI2413 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PMI0394 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PMI0160 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PMI1546 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PMI1849 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMI3715 conserved hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D PMI0333 putative hydrolase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PMI0366 gpt; xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PMI1545 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PMI2862 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PMI0414 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMI1734 nrdA; ribonucleoside-diphosphate reductase 1 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMI0413 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMI1735 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMI3451 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PMI0215 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PMI3501 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PMI1766 5'-nucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D PMI2864 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PMI3311 gppA; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PMI1579 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PMI0217 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D PMI3333 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D PMI1004 putative adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D PMI3370 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PMI1300 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D PMI1220 amn; putative AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D PMI2297 putative amino acid decarboxylase K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PMI0045 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PMI2184 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PMI0218 mazG; putative nucleotide pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMI2347 icc; cyclic 3',5'-adenosine monophosphate phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PMI2336 apaH; bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D PMI2244 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PMI2245 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PMI2246 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PMI3685 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PMI3684 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PMI3683 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D PMI0702 allD; ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350]
D PMI2199 arcC; putative carbamate K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:pmr00240]
D PMI0021 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PMI0020 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PMI3455 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PMI3454 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PMI1678 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PMI0771 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PMI3152 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PMI1313 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PMI2283 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PMI1849 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMI0218 mazG; putative nucleotide pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMI3634 putative inhibitor of septum formation K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PMI0220 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PMI0714 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PMI0649 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PMI0978 conserved hypothetical protein K00876 udk; uridine kinase [EC:2.7.1.48]
D PMI0047 putative secreted 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PMI2177 ushA; protein UshA precursor [includes: UDP-sugar hydrolase and 5'-nucleotidase] K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PMI2239 surE; multifunctional protein SurE (stationary-phase survival protein SurE) [includes: 5'/3'-nucleotidase and exopolyphosphatase] K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMI3532 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D PMI1574 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PMI0045 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PMI2297 putative amino acid decarboxylase K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PMI0643 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PMI1457 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PMI3451 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PMI0650 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PMI0414 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMI1734 nrdA; ribonucleoside-diphosphate reductase 1 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMI0413 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMI1735 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMI1766 5'-nucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D PMI0866 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PMI3154 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PMI2415 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D PMI1487 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PMI2318 thyA; putative thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PMI0287 putative amidohydrolase/metallopeptidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PMI1288 ydfG; NADP-dependent L-serine/L-allo-threonine dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pmr00250]
D PMI0764 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMI1500 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PMI0708 ansB; L-asparaginase II precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PMI1222 putative exported L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PMI3052 asnA; aspartate-ammonia ligase (asparagine synthetase A) K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PMI1765 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMI2546 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PMI3239 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMI3240 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMI3370 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PMI2981 putative lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PMI0886 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PMI3455 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PMI3454 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PMI1407 gadB; glutamate decarboxylase beta K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PMI3383 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMI3677 gltB; glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PMI3676 gltD; glutamate synthase (NADPH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PMI3008 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PMI1616 putA; bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PMI2882 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMI0021 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PMI0020 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PMI0329 glsA; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PMI3067 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMI1783 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pmr00260]
D PMI2755 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMI0001 thrA; bifunctional aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMI3224 metL; bifunctional aspartokinase/homoserine dehydrogenase II [includes: aspartokinase II and homoserine dehydrogenase II] K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PMI3136 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMI0002 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PMI0003 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PMI1269 beta-eliminating lyase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PMI1867 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMI1094 putative 2-hydroxyacid dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PMI1952 tkrA; 2-ketogluconate reductase (2-ketoaldonate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PMI3609 garK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PMI0590 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMI3716 gpmB; probable phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMI2031 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMI0711 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PMI2507 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PMI1288 ydfG; NADP-dependent L-serine/L-allo-threonine dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D PMI3177 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PMI3178 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PMI2019 gcvP; glycine dehydrogenase [decarboxylating] (glycine cleavage system P-protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PMI2021 gcvT; aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMI2044 lpdA; dihydrolipoyl dehydrogenase (glycine cleavage system L protein) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMI2020 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PMI0397 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PMI1459 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D PMI1460 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D PMI0235 putative pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PMI1607 sdaA; L-serine deaminase 1 (L-serine deaminase 1) K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PMI0671 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PMI3303 ilvA; threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PMI0187 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D PMI1774 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D PMI1348 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PMI1347 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pmr00270]
D PMI3185 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PMI3186 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PMI1827 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMI0028 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMI0626 metC; putative cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMI1275 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMI0235 putative pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PMI2758 metH; methionine synthase (5-methyltetrahydrofolate--homocysteine methyltransferase) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PMI3529 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PMI2095 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PMI0214 mtnN; MTA/SAH nucleosidase (5'-methylthioadenosine nucleosidase) (s-adenosylhomocysteine nucleosidase) K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PMI0394 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PMI1259 probable amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D PMI2743 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PMI1248 putative methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PMI2254 mdeA; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PMI1014 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PMI0379 luxS; S-ribosylhomocysteine lyase (autoinducer-2 production protein) K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PMI2755 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMI0001 thrA; bifunctional aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMI3224 metL; bifunctional aspartokinase/homoserine dehydrogenase II [includes: aspartokinase II and homoserine dehydrogenase II] K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PMI3136 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMI2765 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PMI3223 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMI2726 cysD; O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PMI3301 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMI0378 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PMI0340 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PMI0764 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMI0623 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PMI1774 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D PMI3400 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMI1607 sdaA; L-serine deaminase 1 (L-serine deaminase 1) K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PMI0671 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PMI1831 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D PMI2031 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMI0711 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pmr00280]
D PMI3301 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMI2044 lpdA; dihydrolipoyl dehydrogenase (glycine cleavage system L protein) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMI3550 fadB; fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase] K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMI1807 fadJ; fatty acid oxidation complex alpha subunit [includes: enoyl-coa hydratase and 3-hydroxyacyl-coa dehydrogenase] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMI1808 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMI3549 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMI3559 putative bifunctional acetyl-/propionyl-coenzyme A carboxylase alpha chain [includes: biotin carboxylase and biotin carboxyl carrier protein] K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pmr00290]
D PMI3303 ilvA; threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PMI2086 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PMI2087 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PMI2085 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PMI3299 ilvG; Acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI3519 ilvB; acetolactate synthase isozyme I large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI1058 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI3520 ilvN; acetolactate synthase isozyme I small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMI3300 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PMI3305 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PMI3302 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PMI3301 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMI2852 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D PMI1765 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMI2084 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pmr00300]
D PMI2755 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMI0001 thrA; bifunctional aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMI3224 metL; bifunctional aspartokinase/homoserine dehydrogenase II [includes: aspartokinase II and homoserine dehydrogenase II] K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PMI3136 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMI1564 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMI2939 dihydrodipicolinate synthase-family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMI0019 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PMI2288 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PMI2821 argD; acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PMI1556 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PMI3336 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PMI0234 putative decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PMI0347 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PMI0150 putative oxidoreductase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D PMI2075 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMI2074 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pmr00310]
D PMI0570 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PMI2044 lpdA; dihydrolipoyl dehydrogenase (glycine cleavage system L protein) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMI3550 fadB; fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase] K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMI1807 fadJ; fatty acid oxidation complex alpha subunit [includes: enoyl-coa hydratase and 3-hydroxyacyl-coa dehydrogenase] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMI1774 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D PMI3383 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMI1053 putative FAD dependent oxidoreductase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D PMI1419 putative FAD-binding oxidase (putative flavoprotein) K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D PMI1701 putative D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pmr00220]
D PMI3457 argI; ornithine carbamoyltransferase chain I K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PMI3239 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMI3240 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMI3685 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PMI3684 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PMI3683 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D PMI0329 glsA; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PMI2882 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMI3008 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PMI2199 arcC; putative carbamate K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PMI0764 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMI1765 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMI2307 argA; amino-acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D PMI3238 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PMI3237 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PMI2821 argD; acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PMI3236 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pmr00330]
D PMI1457 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PMI2094 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PMI2093 speB; Agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PMI0307 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMI1577 speG; spermidine N(1)-acetyltransferase (diamine acetyltransferase) K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D PMI0335 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PMI1616 putA; bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PMI0369 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PMI0370 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PMI0764 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMI1701 putative D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:pmr00340]
D PMI0665 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PMI0658 hisI; histidine biosynthesis bifunctional protein [includes: phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase] K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PMI0660 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PMI0661 hisH; imidazole glycerol phosphate synthase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PMI0659 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PMI0662 hisB; histidine biosynthesis bifunctional protein [includes: histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase] K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D PMI0663 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI1463 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI0664 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:pmr00350]
D PMI0764 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMI0663 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI1463 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI2743 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PMI0450 adhC; alcohol dehydrogenase (glutathione-dependent formaldehyde dehydrogenase) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMI1486 adhE; aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating), pyruvate-formate-lyase deactivase] K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMI0657 probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D PMI0246 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D PMI3383 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:pmr00360]
D PMI0764 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMI0663 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI1463 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI2743 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PMI3525 putative acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D PMI1509 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D PMI1701 putative D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00380 Tryptophan metabolism [PATH:pmr00380]
D PMI0570 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PMI2044 lpdA; dihydrolipoyl dehydrogenase (glycine cleavage system L protein) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMI3550 fadB; fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase] K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMI1807 fadJ; fatty acid oxidation complex alpha subunit [includes: enoyl-coa hydratase and 3-hydroxyacyl-coa dehydrogenase] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMI0845 ipdC; putative indole-3-pyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D PMI1740 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pmr00400]
D PMI0589 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthetase) phenylalanine-repressible K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMI2368 aroH; putative phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMI0387 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMI1423 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMI3027 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PMI3629 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PMI3292 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PMI0371 aroL; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PMI3026 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PMI0713 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PMI1802 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PMI1343 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PMI1344 trpD; anthranilate synthase component (glutamine amidotransferase) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PMI1345 trpD'; anthranilate synthase component (anthranilate phosphoribosyltransferase) K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PMI1346 trpC; tryptophan biosynthesis protein [includes: indole-3-glycerol phosphate synthase; N-(5'-phospho-ribosyl)anthranilate isomerase] K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D PMI1348 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PMI1347 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PMI0388 tyrA; T-protein [includes: chorismate mutase and prephenate dehydrogenase] K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PMI0390 pheA; P-protein [includes: chorismate mutase and prephenate dehydratase] K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D PMI0764 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMI0663 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI1463 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI2743 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pmr00410]
D PMI0194 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PMI1407 gadB; glutamate decarboxylase beta K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMI0195 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PMI0287 putative amidohydrolase/metallopeptidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PMI3550 fadB; fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase] K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMI1807 fadJ; fatty acid oxidation complex alpha subunit [includes: enoyl-coa hydratase and 3-hydroxyacyl-coa dehydrogenase] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:pmr00430]
D PMI1407 gadB; glutamate decarboxylase beta K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PMI0072 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PMI1772 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMI2713 pduL; putative propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D PMI1771 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:pmr00440]
D PMI3079 phnX; phosphonoacetaldehyde phosphonohydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D PMI2968 conserved hypothetical protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
D PMI2225 putative metal-dependent phosphoesterase K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57]
C 00450 Selenocompound metabolism [PATH:pmr00450]
D PMI3223 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMI0028 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMI0626 metC; putative cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMI1275 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMI2758 metH; methionine synthase (5-methyltetrahydrofolate--homocysteine methyltransferase) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PMI3529 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PMI1248 putative methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PMI2254 mdeA; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PMI1412 sufS; cysteine desulfurase (selenocysteine lyase) K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PMI0695 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PMI2245 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PMI2246 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PMI1497 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PMI3106 selA; L-seryl-tRNA(sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PMI0646 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pmr00460]
D PMI0072 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PMI1500 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PMI0708 ansB; L-asparaginase II precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PMI1222 putative exported L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PMI3052 asnA; aspartate-ammonia ligase (asparagine synthetase A) K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PMI1867 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pmr00470]
D PMI1508 dadB; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D PMI2742 alr; alanine racemase (biosynthetic) K01775 alr; alanine racemase [EC:5.1.1.1]
D PMI1701 putative D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PMI1243 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMI1774 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D PMI0329 glsA; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PMI3247 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PMI2072 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMI0187 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D PMI3336 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PMI0234 putative decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PMI0347 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PMI1509 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:pmr00480]
D PMI0072 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PMI3557 conserved hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PMI0378 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PMI0340 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PMI3464 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PMI1853 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D PMI0769 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PMI0364 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PMI1384 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMI0668 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMI2835 gor; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PMI0891 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PMI0655 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PMI1157 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMI0307 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PMI0183 gsp; bifunctional glutathionylspermidine synthetase/amidase [includes: glutathionylspermidine synthase and glutathionylspermidine amidase K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:pmr00540]
D PMI2273 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PMI2064 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PMI2275 lpxD; UDP-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PMI2160 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PMI2272 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PMI0719 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PMI3653 kdsD; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PMI1090 kdsA; 2-dehydro-3-deoxyphosphooctulonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PMI3652 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PMI0722 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PMI3167 waaA; KDO transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PMI1686 htrB; lipid A biosynthesis lauroyl acyltransferase (heat shock protein B) K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PMI1154 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D PMI0832 putative membrane-associated phosphatase K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D PMI3576 putative sulfatase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D PMI1595 pagP; putative antimicrobial peptide resistance and lipid A acylation protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D PMI1047 arnT; undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D PMI0275 arnT; putative undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D PMI0808 ddg; cold-induced palmitoleoyl transferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D PMI0349 gmhA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PMI2358 rfaE; bifunctional protein HldE [includes: D-beta-D-heptose 7-phosphate kinase and D-beta-D-heptose 1-phosphate adenosyltransferase] K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PMI2258 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PMI3176 waaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PMI3174 waaC; lipopolysaccharide heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PMI3175 waaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PMI3168 waaQ; lipopolysaccharide core biosynthesis glycosyl transferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D PMI3160 glycosyl transferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D PMI2517 putative glycosyltransferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D PMI3169 wabG; lipopolysaccharide core biosynthesis glycosyl transferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D PMI3163 rfaL; O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:pmr00542]
D PMI3316 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pmr00541]
D PMI1490 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMI3102 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMI1951 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMI3189 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMI3188 wbnF; nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PMI1489 wbnF; probable nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PMI3321 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PMI3320 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PMI3323 rffA; lipopolysaccharide biosynthesis aminotransferase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D PMI3322 rffC; lipopolysaccharide biosynthesis acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D PMI3066 glmU; bifunctional protein GlmU [includes: UDP-N-acetylglucosamine pyrophosphorylase and glucosamine-1-phosphate N-acetyltransferase] K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PMI3318 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PMI3319 rffD; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:pmr00550]
D PMI3661 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMI3248 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMI2069 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PMI2072 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMI2075 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMI1243 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMI2074 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PMI2280 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PMI0673 putative membrane-associated phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PMI2073 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMI2070 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PMI3680 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PMI3021 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMI0204 mrcB; penicillin-binding protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PMI1850 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PMI0426 pbpA; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMI2076 ftsI; penicillin-binding protein (peptidoglycan synthetase protein) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMI0423 dacA; putative penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMI0669 dacC; penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMI3408 dacB; penicillin-binding protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:pmr00552]
D PMI0673 putative membrane-associated phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PMI3316 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pmr00543]
D PMI3316 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMI3327 rffM; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D PMI3325 rffT; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D PMI3185 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PMI3186 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pmr00730]
D PMI2777 thiC; thiamine biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PMI1593 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PMI2779 thiF; thiamine biosynthesis adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D PMI1860 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMI0097 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PMI2782 thiH; thiazole biosynthesis protein K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D PMI0094 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PMI2781 thiG; thiazole biosynthesis K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PMI2778 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PMI0084 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PMI3356 engC; probable GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PMI2500 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PMI0872 putative kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D PMI2184 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pmr00740]
D PMI1317 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PMI0081 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PMI3339 haloacid dehalogenase-like hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D PMI2353 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D PMI0082 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PMI1403 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PMI0014 ribF; riboflavin biosynthesis protein (includes: riboflavin kinase and FMN adenyltransferase) K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PMI0729 aphA; class B acid phosphatase precursor K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2]
D PMI0246 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D PMI3547 fadI; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D PMI2348 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PMI0889 putative Nudix hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D PMI1782 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pmr00750]
D PMI1387 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PMI1385 pdxY; pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PMI0241 epd; D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D PMI1792 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D PMI0711 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PMI2333 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PMI1885 pdxJ; pyridoxal phosphate biosynthetic protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D PMI0003 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pmr00760]
D PMI0767 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PMI2413 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PMI2505 nadR; transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D PMI0047 putative secreted 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PMI2177 ushA; protein UshA precursor [includes: UDP-sugar hydrolase and 5'-nucleotidase] K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PMI2239 surE; multifunctional protein SurE (stationary-phase survival protein SurE) [includes: 5'/3'-nucleotidase and exopolyphosphatase] K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMI0430 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PMI0218 mazG; putative nucleotide pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMI2775 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PMI1871 nadE; glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D PMI0374 putative competence-damaged protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PMI1501 pncA; pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PMI0881 npdA; NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PMI1901 ppnK; probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PMI3242 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D PMI1200 pntA; NAD(P) transhydrogenase subunit alpha (pyridine nucleotide transhydrogenase subunit alpha) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PMI1201 pntB; NAD(P) transhydrogenase subunit beta (pyridine nucleotide transhydrogenase subunit beta) K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D PMI3383 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pmr00770]
D PMI3299 ilvG; Acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI3519 ilvB; acetolactate synthase isozyme I large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI1058 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMI3520 ilvN; acetolactate synthase isozyme I small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMI3300 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PMI3305 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PMI3302 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PMI0196 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PMI0102 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PMI0195 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PMI3250 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D PMI3155 coaBC; coenzyme A biosynthesis bifunctional protein [includes: phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase] K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PMI0218 mazG; putative nucleotide pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMI3165 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PMI2052 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PMI1884 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PMI2913 putative holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PMI2605 nrpG; putative 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D PMI0074 conserved hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D PMI3301 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMI0287 putative amidohydrolase/metallopeptidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PMI0194 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pmr00780]
D PMI0605 bioC; biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D PMI1795 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMI0754 putative exported protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMI0863 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMI0861 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI3202 probable short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI2912 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI2274 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMI1383 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMI2924 bioH; carboxylesterase (biotin synthesis protein) K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D PMI0604 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PMI0602 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PMI0606 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PMI1291 bioD; putative dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PMI0603 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PMI3249 birA; BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-coa-carboxylase] synthetase] K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pmr00785]
D PMI0421 lipB; lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PMI0420 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PMI1051 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PMI2044 lpdA; dihydrolipoyl dehydrogenase (glycine cleavage system L protein) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMI2046 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMI2045 aceF; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMI0569 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PMI0570 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PMI2019 gcvP; glycine dehydrogenase [decarboxylating] (glycine cleavage system P-protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PMI2021 gcvT; aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMI2020 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pmr00790]
D PMI0639 folE; GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PMI2500 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PMI1112 ntpA; DATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D PMI2363 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PMI0197 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PMI3413 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PMI2337 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PMI1786 folC; FolC bifunctional protein [includes: folylpolyglutamate synthase and dihydrofolate synthase] K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PMI1317 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PMI2822 pabA; para-aminobenzoate synthase glutamine amidotransferase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D PMI1605 pabB; para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PMI0864 pabC; aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase) K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PMI2251 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PMI2252 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PMI0122 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PMI2296 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PMI1612 metallo-beta-lactamase superfamily protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D PMI0610 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PMI0611 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PMI0613 moaE; molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PMI0008 mog; molybdopterin biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PMI0637 moeA; molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PMI2831 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:pmr00670]
D PMI2337 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PMI0670 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PMI2155 folD; FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclohydrolase] K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PMI1867 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMI1576 purN; phosphoribosylglycinamide formyltransferase (5'-phosphoribosylglycinamide transformylase) K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PMI2768 purH; bifunctional purine biosynthesis protein [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase] K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMI3287 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PMI2021 gcvT; aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMI2758 metH; methionine synthase (5-methyltetrahydrofolate--homocysteine methyltransferase) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PMI2318 thyA; putative thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PMI1493 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PMI2932 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PMI2027 putative 5-formyltetrahydrofolate cyclo ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pmr00860]
D PMI1818 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMI1086 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PMI0205 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PMI1455 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PMI3332 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PMI3331 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PMI2774 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PMI1839 hemF; Coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D PMI2885 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PMI3554 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D PMI2183 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PMI3330 hemX; putative uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PMI2247 cysG; siroheme synthase [includes: uroporphyrin-III C-methyltransferase and sirohydrochlorin ferrochelatase] K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D PMI1477 cysG; siroheme synthase [includes: uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase] K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D PMI0105 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PMI2445 putative plasmid-related ATPase K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D PMI2441 putative plasmid-related protein K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D PMI1338 btuR; cobalamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PMI3253 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pmr00130]
D PMI2753 ubiC; chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D PMI2752 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PMI3546 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D PMI1782 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PMI2022 visC; putative monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D PMI1733 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D PMI2023 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PMI3536 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PMI0448 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D PMI1746 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PMI1745 menD; menaquinone biosynthesis protein mend [includes: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase and 2-oxoglutarate decarboxylase] K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PMI1744 yfbB; acyl-CoA thioester hydrolase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D PMI1742 menC; O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PMI1741 menE; O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PMI1743 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PMI1418 putative thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D PMI3214 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PMI0976 conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pmr00900]
D PMI0094 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PMI2281 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PMI2242 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PMI1084 ispE; 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PMI2241 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PMI1845 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PMI0018 lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PMI1782 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PMI2767 putative isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PMI0095 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PMI3404 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PMI2280 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:pmr00907]
D PMI3550 fadB; fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase] K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMI1807 fadJ; fatty acid oxidation complex alpha subunit [includes: enoyl-coa hydratase and 3-hydroxyacyl-coa dehydrogenase] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMI1808 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMI3549 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PMI0240 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pmr00523]
D PMI3321 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PMI3320 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:pmr01053]
D PMI1746 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PMI2599 putative non-ribosomal peptide synthase (putative siderophore synthase) K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D PMI2601 nrpU; putative siderophore biosynthetic protein K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D PMI2600 nrpS; putative non-ribosomal peptide synthase (putative siderophore synthase) K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
C 01055 Biosynthesis of vancomycin group antibiotics
D PMI3320 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:pmr00332]
D PMI0369 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PMI0370 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pmr00261]
D PMI2245 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PMI2246 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PMI2755 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMI0001 thrA; bifunctional aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMI3224 metL; bifunctional aspartokinase/homoserine dehydrogenase II [includes: aspartokinase II and homoserine dehydrogenase II] K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PMI3136 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMI1564 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMI2939 dihydrodipicolinate synthase-family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMI0019 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pmr00521]
D PMI0548 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMI1863 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PMI3321 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PMI3320 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:pmr00525]
D PMI3321 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PMI3320 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pmr00401]
D PMI0388 tyrA; T-protein [includes: chorismate mutase and prephenate dehydrogenase] K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PMI0764 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMI0663 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI1463 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI2743 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PMI1343 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PMI1344 trpD; anthranilate synthase component (glutamine amidotransferase) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PMI0860 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMI2902 putative transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMI0861 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI3202 probable short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI2912 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI1383 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PMI0862 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D PMI2910 putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pmr00999]
D PMI2095 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PMI3292 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
D PMI0232 putative siderophore biosynthesis protein K23446 sfnaD; D-ornithine---citrate ligase [EC:6.3.2.58]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pmr00362]
D PMI1808 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMI3549 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMI2839 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PMI1807 fadJ; fatty acid oxidation complex alpha subunit [includes: enoyl-coa hydratase and 3-hydroxyacyl-coa dehydrogenase] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMI3550 fadB; fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase] K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00627 Aminobenzoate degradation [PATH:pmr00627]
D PMI0793 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PMI1782 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:pmr00625]
D PMI0657 probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D PMI0450 adhC; alcohol dehydrogenase (glutathione-dependent formaldehyde dehydrogenase) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMI1486 adhE; aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating), pyruvate-formate-lyase deactivase] K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMI2113 aldB; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D PMI2839 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
D PMI0034 hybC; hydrogenase-2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D PMI0031 hyb0; hydrogenase-2 small chain precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D PMI1808 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMI3549 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
D PMI3685 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PMI3684 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PMI3683 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:pmr00930]
D PMI3550 fadB; fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase and 3-hydroxybutyryl-CoA epimerase] K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMI1807 fadJ; fatty acid oxidation complex alpha subunit [includes: enoyl-coa hydratase and 3-hydroxyacyl-coa dehydrogenase] K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D PMI2839 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:pmr00626]
D PMI0657 probable alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D PMI0450 adhC; alcohol dehydrogenase (glutathione-dependent formaldehyde dehydrogenase) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMI1486 adhE; aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating), pyruvate-formate-lyase deactivase] K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pmr03020]
D PMI2785 rpoB; DNA-directed RNA polymerase, beta-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMI2784 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMI3280 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMI2863 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pmr03010]
D PMI0715 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PMI2285 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PMI3261 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PMI3279 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PMI3272 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PMI3374 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PMI2794 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PMI3269 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PMI3670 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PMI3254 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PMI3278 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PMI2795 rpsl; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PMI3277 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PMI3268 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PMI3421 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PMI0383 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PMI3264 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PMI3376 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PMI3259 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PMI0013 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PMI2370 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PMI2788 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PMI3258 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PMI3255 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PMI3256 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PMI3267 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PMI3270 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PMI2786 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PMI3377 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PMI2787 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PMI2789 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PMI3669 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PMI3265 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PMI3274 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PMI3262 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PMI3281 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PMI3271 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PMI0386 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PMI1037 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PMI3405 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PMI3260 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PMI3257 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PMI3266 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PMI0826 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PMI3406 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PMI3157 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PMI3263 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PMI3273 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PMI3379 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PMI3220 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PMI0857 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PMI3158 rpmG; 50S ribosomal rotein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PMI3131 rpmH; 50s ribosomal protein l34 K02914 RP-L34; large subunit ribosomal protein L34
D PMI1036 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PMI3276 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D 16S_rRNA-2 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16SrRNA-1 16SrRNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-1 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-3 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16SrRNA-2 16SrRNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-4 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-5 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-1 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-2 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-4 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-3 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23SrRNA-2 23SrRNA K01980 23SrRNA; 23S ribosomal RNA
D 23SrRNA-1 23SrRNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-5 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 5S_rRNA-1 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-8 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-4 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-5 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-3 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-2 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-7 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-6 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pmr00970]
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-6 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-7 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-4 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-3 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-4 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-6 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-8 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-7 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-5 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-4 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-6 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-7 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-5 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-6 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-2 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-5 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-6 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-5 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Sec tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D PMI1818 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMI0539 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PMI0376 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMI1111 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMI0766 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PMI2854 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMI2855 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMI1034 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMI0700 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMI3106 selA; L-seryl-tRNA(sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PMI2158 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMI0646 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMI3287 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PMI3462 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMI0433 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMI0015 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMI2008 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMI1103 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMI2264 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMI1844 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMI1038 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMI1039 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMI1386 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMI1728 putative tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PMI3032 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pmr03060]
D PMI3275 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D PMI2791 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D PMI3415 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D PMI0078 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PMI0079 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D PMI0077 yajC; putative preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PMI3128 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMI2061 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMI3183 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D PMI2062 secM; secretion monitor protein K13301 secM; secretion monitor
D PMI0382 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMI3605 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D PMI3539 tatA; sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D PMI3540 tatB; Sec-independent protein translocase K03117 tatB; sec-independent protein translocase protein TatB
D PMI3541 tatC; sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
D PMI1889 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMI0016 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pmr04122]
D PMI1860 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMI0623 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PMI3597 sirA; sulfurtransferase (tRNA 2-thiouridine synthesizing protein A) K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PMI2796 putative intracellular sulfur oxidation protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PMI2797 putative intracellular sulfur oxidation protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PMI2798 putative intracellular sulfur oxidation protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PMI0794 putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PMI0888 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PMI0613 moaE; molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PMI0610 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PMI0612 moaD; molybdenum cofactor biosynthesis protein D K03636 moaD; sulfur-carrier protein
D PMI0636 moeB; molybdopterin biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PMI0611 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PMI0008 mog; molybdopterin biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PMI0097 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PMI2780 thiS; thiamine biosynthesis protein K03154 thiS; sulfur carrier protein
D PMI2779 thiF; thiamine biosynthesis adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:pmr03018]
D PMI2321 nudH; (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PMI0852 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMI3312 rhlB; ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PMI0221 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMI3422 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PMI0620 rhlE; putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PMI3372 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMI3424 deaD; cold-shock DEAD box protein A (ATP-dependent RNA helicase) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMI3345 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PMI3314 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PMI3203 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMI0009 dnaK; chaperone protein DnaK (heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D PMI2543 groL; 60 Kda chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMI3365 hfq; protein Hfq (host factor-I protein) K03666 hfq; host factor-I protein
D PMI1578 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PMI0198 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pmr03030]
D PMI1602 holE2; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMI0538 holE1; putative DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMI0228 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMI2483 putative plasmid-related exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMI2270 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMI0139 dnaX; DNA polymerase III Tau subunit (contains DNA polymerase III Gamma subunit) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMI0867 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMI0431 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMI2495 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMI3463 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMI3133 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMI0483 putative phage replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMI2640 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMI2741 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMI2371 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PMI2449 putative plasmid-related single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMI2747 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI0899 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI0227 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PMI2271 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PMI2826 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMI1823 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pmr03410]
D PMI1310 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PMI1899 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PMI0326 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PMI3164 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PMI1239 probable base excision DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PMI2853 tag; DNA-3-methyladenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PMI1495 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PMI0838 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PMI2826 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMI2010 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMI1823 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pmr03420]
D PMI0877 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PMI2746 uvrA; UvrABC excision repair system proteinA (excinuclease ABC subunit A) K03701 uvrA; excinuclease ABC subunit A
D PMI0607 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PMI1521 uvrC; UvrABC system protein C (excinuclease ABC subunit C) K03703 uvrC; excinuclease ABC subunit C
D PMI3340 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMI2826 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMI1823 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pmr03430]
D PMI2235 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D PMI3363 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D PMI2089 mutH; DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D PMI3340 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMI0848 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PMI1547 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PMI0096 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PMI2010 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMI2449 putative plasmid-related single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMI2747 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI0899 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI2270 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMI3133 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMI0139 dnaX; DNA polymerase III Tau subunit (contains DNA polymerase III Gamma subunit) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMI0431 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMI0867 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMI0228 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMI2483 putative plasmid-related exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMI1602 holE2; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMI0538 holE1; putative DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMI3463 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMI2495 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMI1823 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMI1999 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMI3029 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pmr03440]
D PMI2010 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMI2449 putative plasmid-related single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMI2747 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI0899 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI3134 recF; dna replication and repair protein K03629 recF; DNA replication and repair protein RecF
D PMI1886 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D PMI0141 recR; recombination protein K06187 recR; recombination protein RecR
D PMI0375 recA; protein RecA (recombinase A) K03553 recA; recombination protein RecA
D PMI2826 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMI1115 ruvA; Holliday junction ATP-dependent DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D PMI1116 ruvB; Holliday junction ATP-dependent DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PMI1114 ruvC; Holliday junction nuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PMI2866 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PMI2309 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PMI2311 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PMI2308 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PMI2270 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMI3133 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMI0139 dnaX; DNA polymerase III Tau subunit (contains DNA polymerase III Gamma subunit) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMI0431 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMI0867 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMI0228 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMI2483 putative plasmid-related exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMI1602 holE2; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMI0538 holE1; putative DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMI3463 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMI2495 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMI3219 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PMI3375 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D PMI0137 priC; primosomal replication protein N'' K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pmr03250]
D PMI2823 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pmr02010]
D PMI1835 cysP; sulfate/thiosulfate ABC transporter, thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PMI3204 sbp; sulfate-binding protein (sulfate starvation-induced protein) K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PMI1834 cysT; sulfate/thiosulfate ABC transporter, permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D PMI1833 cysW; sulfate/thiosulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D PMI1832 cysA; sulfate/thiosulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PMI0597 modA; molybdate ABC transporter, substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMI1539 ABC transporter, substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMI0598 modB; molybdenum ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D PMI1538 ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D PMI0599 modC; molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PMI1537 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PMI0591 modF; putative molybdenum transport ATP-binding protein (photorepair protein) K05776 modF; molybdate transport system ATP-binding protein
D PMI3071 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMI0190 afuA; putative ferric ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMI3070 ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D PMI0189 afuB; putative ferric ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D PMI0188 afuC; ferric cation import ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMI2322 thiB; thiamine ABC transporter, substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D PMI2323 thiP; thiamine ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D PMI2324 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PMI2734 potD; spermidine/putrescine ABC transporter, substrate-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PMI2735 potC; spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D PMI2736 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D PMI2737 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PMI0410 proX; putative glycine betaine/L-proline ABC transporter, substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PMI0411 proW; glycine betaine/L-proline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PMI0412 proV; glycine betaine/L-proline ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PMI3658 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PMI3657 putative exported protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PMI3656 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PMI3659 putative anti-sigma factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D PMI3655 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PMI0090 rbsB; D-ribose ABC transporter, substrate-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D PMI0091 rbsC; ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D PMI0092 rbsA; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMI0093 rbsD; high affinity ribose transport protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D PMI3617 ugpB; glycerol-3-phosphate ABC transporter, substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PMI3616 ugpA; sn-glycerol-3-phosphate ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PMI3615 ugpE; sn-glycerol-3-phosphate ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PMI3614 ugpC; sn-glycerol-3-phosphate ABC transporter, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PMI2893 pstS; phosphate ABC transporter, substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PMI2894 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D PMI2895 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D PMI2896 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PMI0681 artI; arginine ABC transporter, substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D PMI0679 artM; arginine ABC transporter, permease protein K09998 artM; arginine transport system permease protein
D PMI0680 artQ; arginine ABC transporter, permease protein K09999 artQ; arginine transport system permease protein
D PMI0682 artP; arginine ABC transporter, ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D PMI0437 gltI; glutamate/aspartate ABC transporter, substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PMI0435 gltK; glutamate/aspartate ABC transporter, permease protein K10002 gltK; glutamate/aspartate transport system permease protein
D PMI0436 gltJ; glutamate/aspartate ABC transporter, permease protein K10003 gltJ; glutamate/aspartate transport system permease protein
D PMI0434 gltL; glutamate/aspartate ABC transporter, ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PMI1318 nlpA; lipoprotein-28 K02073 metQ; D-methionine transport system substrate-binding protein
D PMI2261 metQ; D-methionine ABC transporter, substrate-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PMI3020 probable lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PMI1247 metQ; probable D-methionine-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PMI2260 metI; D-methionine ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D PMI2259 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PMI1475 oppA; oligopeptide ABC transporter, oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1367 mppA; periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1476 oppA2; oligopeptide ABC transporter, oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1474 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D PMI1473 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D PMI1472 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PMI1471 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PMI2847 dppA; dipeptide ABC transporter, substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMI2846 dppB; dipeptide ABC transporter, permease protein K12369 dppB; dipeptide transport system permease protein
D PMI2845 dppC; dipeptide ABC transporter, permease protein K12370 dppC; dipeptide transport system permease protein
D PMI2844 dppD; dipeptide ABC transporter, ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D PMI2843 dppF; dipeptide ABC transporter, ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D PMI1378 sapA; peptide transport periplasmic protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PMI1379 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D PMI1380 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D PMI1381 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D PMI1382 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D PMI2947 ABC transporter. substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D PMI2946 ABC-transporter, permease protein K15585 nikB; nickel transport system permease protein
D PMI2945 ABC transporter, permease protein K15586 nikC; nickel transport system permease protein
D PMI2944 ABC transporter, ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D PMI2943 ABC transporter, ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D PMI0213 putative periplasmic binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D PMI1041 btuC; vitamin B12 import system permease protein K06073 btuC; vitamin B12 transport system permease protein
D PMI1042 btuD; putative vitamin B12 transport ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D PMI1152 znuA; high-affinity zinc uptake system substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D PMI1150 znuB; high-affinity zinc uptake system membrane protein K09816 znuB; zinc transport system permease protein
D PMI1151 znuC; high-affinity zinc uptake system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PMI1027 sitA; iron ABC transporter, periplasmic substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D PMI1025 sitC; iron ABC transporter, membrane protein K11605 sitC; manganese/iron transport system permease protein
D PMI1024 sitD; iron ABC transporter, membrane protein K11606 sitD; manganese/iron transport system permease protein
D PMI1026 sitB; iron ABC transporter, ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D PMI0878 lolC; lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PMI0880 lolE; lipoprotein-releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PMI0879 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PMI3465 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D PMI3466 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D PMI3649 putative ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PMI3607 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D PMI3606 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PMI2603 nrpA; putative siderophore ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D PMI2604 nrpB; putative siderophore ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D PMI0718 msbA; lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PMI0124 mdlA; putative efflux ABC transporter, ATP-binding membrane protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMI0125 mdlB; putative efflux ABC transporter, ATP-binding membrane protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMI0278 zapB; Type I secretion ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PMI0693 cydC; ABC transporter, ATP-binding and permease protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PMI0694 cydD; ABC transporter, ATP-binding and permease protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PMI0687 macB; macrolide-specific ABC-type efflux carrier K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PMI3705 putative ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:pmr02060]
D PMI1829 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PMI1828 hpr; PTS system phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D PMI1830 crr; PTS family enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMI2292 ptsG; glucose-specific PTS system, EIIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PMI0455 nagE; N-acetylglucosamine-specific PTS system, EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PMI2982 PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D PMI3515 PTS system EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PMI2226 PTS system, IIabc component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PMI0291 treB; trehalose-specific PTS system, EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D PMI2954 chbA; N,N'-diacetylchitobiose-specific PTS system, EIIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PMI2956 chbB; N,N'-diacetylchitobiose-specific PTS system, EIIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PMI2955 chbC; N,N'-diacetylchitobiose-specific PTS system, EIIC component K02761 celB; cellobiose PTS system EIIC component
D PMI2135 agaF; putative N-acetylgalactosamine-specific PTS system, EIIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PMI2138 agaV; putative N-acetylgalactosamine-specific PTS system, EIIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D PMI2137 agaW; putative N-acetylgalactosamine-specific PTS system, EIIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D PMI2136 agaD; putative N-acetylgalactosamine-specific PTS system, EIID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D PMI1777 PTS system EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PMI1776 PTS system EIIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D PMI1775 putative PTS system EIIC component K03475 ulaA; ascorbate PTS system EIIC component
D PMI2157 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PMI2320 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PMI3644 ptsO; phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D PMI3646 ptsN; nitrogen regulatory protein [includes: PTS system EIIA component] K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pmr03070]
D PMI2349 tolC; outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PMI1266 channel-forming component of a multidrug resistance efflux pump K12340 tolC; outer membrane protein
D PMI2699 putative type III secretion system protein K03221 yscF; type III secretion protein F
D PMI2694 type III secretion system protein K03230 yscV; type III secretion protein V
D PMI2689 type III secretion system protein K03225 yscQ; type III secretion protein Q
D PMI0342 putative type IV prepilin-like leader peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D PMI0078 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PMI0079 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D PMI2791 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D PMI3415 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D PMI3275 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D PMI0077 yajC; putative preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PMI3128 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMI2061 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMI2062 secM; secretion monitor protein K13301 secM; secretion monitor
D PMI3605 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D PMI3183 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D PMI0382 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMI3539 tatA; sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D PMI3540 tatB; Sec-independent protein translocase K03117 tatB; sec-independent protein translocase protein TatB
D PMI3541 tatC; sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
D PMI2056 hpmB; hemolysin activator protein (putative two-partner secretion system accessory protein) K11017 shlB; hemolysin activation/secretion protein
D PMI2057 hpmA; hemolysin K11016 shlA; hemolysin
D PMIP07 pilX1; putative transglycosylase K03194 virB1; type IV secretion system protein VirB1
D PMIP10 pilX5; putative conjugal transfer protein K03200 virB5; type IV secretion system protein VirB5
D PMIP14 pilX9; conjugal transfer protein K03204 virB9; type IV secretion system protein VirB9
D PMIP12 pilX6; putative conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D PMIP13 pilX8; conjugal transfer protein K03203 virB8; type IV secretion system protein VirB8
D PMIP15 pilX10; conjugal transfer protein K03195 virB10; type IV secretion system protein VirB10
D PMIP09 pilX4; putative conjugal transfer protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D PMIP16 pilX11; conjugal transfer protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D PMIP17 taxB; conjugal transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PMI1118 Rhs-family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PMI2991 VgrG-like protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PMI0208 VgrG-like protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PMI1331 VgrG-like protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PMI0751 putative RHS accessory genetic element (VgrG-like protein) K11904 vgrG; type VI secretion system secreted protein VgrG
D PMI1117 hcp; conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PMI2990 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PMI0207 hcp; conserved hypothetical protein (putative hemolysin co-regulated protein) K11903 hcp; type VI secretion system secreted protein Hcp
D PMI0750 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PMI0743 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D PMI0736 putative membrane protein K11891 impL; type VI secretion system protein ImpL
D PMI0741 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D PMI0740 probable ATPase K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pmr02020]
D PMI0052 phoR; phosphate regulon sensor protein (two-component histidine kinase) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMI0051 phoB; phosphate regulon transcriptional regulator (two-component response regulator) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PMI2500 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PMI2893 pstS; phosphate ABC transporter, substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PMI0884 phoQ; two-component sensor kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PMI0885 phoP; two-component response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PMI2950 putative outer membrane protein K07804 pagC; putatice virulence related protein PagC
D PMI1366 putative exported protein K07804 pagC; putatice virulence related protein PagC
D PMI2892 envZ; osmolarity sensor protein (two-component system sensor kinase) K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PMI2891 ompR; osmolarity transcriptional regulator (two-component system response regulator) K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PMI0765 ompF; outer membrane porin K09476 ompF; outer membrane pore protein F
D PMI0044 putative outer membrane protein K09476 ompF; outer membrane pore protein F
D PMI3198 cpxA; two-component system sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMI3199 cpxR; two component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PMI1588 baeS; two-component system sensor kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D PMI1589 baeR; two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D PMI1585 mdtA; multidrug resistance protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D PMI1586 mdtB; multidrug resistance protein K07788 mdtB; multidrug efflux pump
D PMI1587 mdtC; multidrug resistance protein K07789 mdtC; multidrug efflux pump
D PMI1043 arnB; UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D PMI1672 flhD; flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D PMI1671 flhC; flagellar transcriptional activator K02402 flhC; flagellar transcriptional activator FlhC
D PMI1619 fliC2; flagellin 2 K02406 fliC; flagellin
D PMI1620 fliC1; flagellin 1 K02406 fliC; flagellin
D PMI1618 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D PMI1670 motA; chemotaxis protein (motility protein A) K02556 motA; chemotaxis protein MotA
D PMI1227 kdpD; two-component sensor kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PMI1226 kdpE; two-component response regulator of kdp operon K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PMI3678 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PMI3719 arcA; aerobic respiration control protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D PMI2935 putative membrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D PMI1230 putative membrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D PMI2936 putative membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D PMI1229 putative membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D PMI2937 putative exported protein K07795 tctC; putative tricarboxylic transport membrane protein
D PMI3132 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D PMI0231 putative citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D PMI0389 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PMI0642 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PMI3569 narX; nitrate/nitrite teo-component system, sensor kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D PMI3568 narL; nitrate/nitrite two-component system, response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PMI1553 narP; nitrate/nitrite response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D PMI3571 narG; respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PMI3572 narH; respiratory nitrate reductase 1 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PMI3574 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PMI3573 narJ; respiratory nitrate reductase 1 delta chain K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D PMI3588 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMI3587 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMI3586 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMI3585 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMI2408 MFS-family transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PMI0191 MFS-family transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PMI0192 two-component sensor kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D PMI0193 two-component response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D PMI2262 rcsF; regulator of colanic acid capsule synthesis K06080 rcsF; RcsF protein
D PMI1731 rcsC; two component system, [includes both sensor kinase and response regulator domains] (capsular synthesis regulator component C) K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D PMI1729 rsbA; swarming behavior regulation two-component system, sensor kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D PMI1730 rcsB; two component system, response regulator (capsular synthesis regulator component B) K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PMI1522 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PMI0377 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D PMI1467 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D PMI3436 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI2534 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI2729 atfB; type 1 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D PMI3350 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI1063 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI0534 fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI2212 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI3437 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI3349 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI2730 atfC; outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI2533 outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI1062 Fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI1186 outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI1195 outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI2287 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D PMI1870 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D PMI2883 ntrB; nitrogen regulation protein NR(II) (two-component system sensor kinase) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PMI2884 glnG; nitrogen regulation protein NR(I) (two-component system response regulator) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PMI2882 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMI2407 pgtC; phosphoglycerate transport system, substrate-binding/regulatory protein K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D PMI2406 pgtB; putative phosphoglycerate transport system sensor kinase K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D PMI2405 pgtA; phosphoglycerate transport system transcriptional regulator K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D PMI3648 rpoN; RNA polymerase sigma-54 factor (sigma-N) K03092 rpoN; RNA polymerase sigma-54 factor
D PMI1874 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PMI1872 putative two-component system response regulator (sigma-54 interacting regulator) K07715 glrR; two-component system, NtrC family, response regulator GlrR
D PMI0031 hyb0; hydrogenase-2 small chain precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D PMI0034 hybC; hydrogenase-2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D PMI1664 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PMI1666 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMI2808 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMI2809 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMI1665 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D PMI2813 aer; aerotaxis receptor K03776 aer; aerotaxis receptor
D PMI1667 cheW; chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PMI1668 cheA; chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PMI1662 cheY; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PMI1663 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PMI1684 ttrS; two component system sensor kinase of tetrathionate reductase complex K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D PMI1685 ttrR; two component system response regulator of tetrathionate reductase complex K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D PMI1681 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D PMI1683 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D PMI1682 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D PMI0434 gltL; glutamate/aspartate ABC transporter, ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PMI0435 gltK; glutamate/aspartate ABC transporter, permease protein K10002 gltK; glutamate/aspartate transport system permease protein
D PMI0436 gltJ; glutamate/aspartate ABC transporter, permease protein K10003 gltJ; glutamate/aspartate transport system permease protein
D PMI0437 gltI; glutamate/aspartate ABC transporter, substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PMI2820 crp; catabolite gene activator (cAMP receptor protein) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PMI0329 glsA; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PMI0573 cydA; cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMI2377 putative cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMI1434 cytochrome oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMI0574 cydB; cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMI2376 cytochrome bd ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMI1435 cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMI0575 putative membrane protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D PMI2028 putative toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D PMI2029 putative HlyD-family toxin secretion protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D PMI2030 putative toxin transporter K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D PMI2349 tolC; outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PMI1266 channel-forming component of a multidrug resistance efflux pump K12340 tolC; outer membrane protein
D PMI3318 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PMI3319 rffD; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PMI3707 FecR-like transcriptional regulator K07165 fecR; transmembrane sensor
D PMI1656 flgM; negative regulator of flagellin synthesis (anti-sigma-28 factor) K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D PMI0307 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pmr02024]
D PMI0379 luxS; S-ribosylhomocysteine lyase (autoinducer-2 production protein) K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PMI3365 hfq; protein Hfq (host factor-I protein) K03666 hfq; host factor-I protein
D PMI1343 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PMI1344 trpD; anthranilate synthase component (glutamine amidotransferase) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PMI0589 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthetase) phenylalanine-repressible K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMI2368 aroH; putative phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMI0387 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMI1423 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMI1874 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PMI1872 putative two-component system response regulator (sigma-54 interacting regulator) K07715 glrR; two-component system, NtrC family, response regulator GlrR
D PMI1672 flhD; flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D PMI1671 flhC; flagellar transcriptional activator K02402 flhC; flagellar transcriptional activator FlhC
D PMI1226 kdpE; two-component response regulator of kdp operon K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PMI0192 two-component sensor kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D PMI0193 two-component response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D PMI1407 gadB; glutamate decarboxylase beta K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PMI1406 gadC; probable glutamate/gamma-aminobutyrate antiporter (extreme acid sensitivity protein) K20265 gadC; glutamate:GABA antiporter
D PMI2081 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMI1166 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMI2820 crp; catabolite gene activator (cAMP receptor protein) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PMI2748 zur; zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PMI1317 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PMI0081 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PMI1526 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PMI2707 putative multidrug efflux protein K18306 mexH; membrane fusion protein, multidrug efflux system
D PMI2708 putative multidrug efflux protein K18307 mexI; multidrug efflux pump
D PMI1475 oppA; oligopeptide ABC transporter, oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1367 mppA; periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1476 oppA2; oligopeptide ABC transporter, oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1474 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D PMI1473 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D PMI1472 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PMI1471 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PMI2516 yntA; putative nickel/di-oligopepetide ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMI1480 ABC transporter, substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMI2515 yntB; putative nickel/di-oligopepetide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMI1481 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMI2514 yntC; putative nickel/di-oligopepetide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMI1482 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMI2513 yntD; putative nickel/di-oligopepetide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMI1483 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMI2512 yntE; putative nickel/di-oligopepetide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PMI1484 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PMI3128 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMI2791 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D PMI3415 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D PMI3275 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D PMI0077 yajC; putative preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PMI2061 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMI3605 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D PMI3183 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D PMI0382 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pmr02030]
D PMI1666 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMI2808 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMI2809 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMI1665 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D PMI2813 aer; aerotaxis receptor K03776 aer; aerotaxis receptor
D PMI0090 rbsB; D-ribose ABC transporter, substrate-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D PMI2847 dppA; dipeptide ABC transporter, substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMI1668 cheA; chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PMI1667 cheW; chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PMI1662 cheY; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PMI1661 cheZ; chemotaxis phosphatase K03414 cheZ; chemotaxis protein CheZ
D PMI1663 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PMI1664 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PMI1631 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D PMI1637 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D PMI1638 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PMI1670 motA; chemotaxis protein (motility protein A) K02556 motA; chemotaxis protein MotA
D PMI1669 motB; chemotaxis protein (motility protein B) K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pmr02040]
D PMI1629 fliE; flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D PMI1630 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D PMI1631 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D PMI1632 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D PMI1633 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PMI1634 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D PMI1635 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PMI1636 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D PMI1637 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D PMI1638 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PMI1639 fliO; flagellar protein K02418 fliO; flagellar protein FliO/FliZ
D PMI1640 fliP; flagellar biosynthetic protein K02419 fliP; flagellar biosynthesis protein FliP
D PMI1641 fliQ; flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ
D PMI1642 fliR; flagellar biosynthetic protein K02421 fliR; flagellar biosynthesis protein FliR
D PMI1659 flhA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D PMI1660 flhB; flagellar biosynthetic protein K02401 flhB; flagellar biosynthesis protein FlhB
D PMI1655 flgA; flagella basal body P-ring formation protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PMI1654 flgB; flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D PMI1653 flgC; flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D PMI1652 flgD; basal-body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PMI1651 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D PMI1650 flgF; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D PMI1649 flgG; flagellar basal-body rod protein (distal rod protein) K02392 flgG; flagellar basal-body rod protein FlgG
D PMI1648 flgH; flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D PMI1647 flgI; flagellar P-ring protein precursor (basal body P-ring protein) K02394 flgI; flagellar P-ring protein FlgI
D PMI1646 flgJ; peptidoglycan hydrolase (muramidase) K02395 flgJ; peptidoglycan hydrolase FlgJ
D PMI1645 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D PMI1644 flgL; flagellar hook-associated protein 3 (hook-filament junction protein) K02397 flgL; flagellar hook-associated protein 3 FlgL
D PMI1619 fliC2; flagellin 2 K02406 fliC; flagellin
D PMI1620 fliC1; flagellin 1 K02406 fliC; flagellin
D PMI1621 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D PMI1622 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D PMI1623 fliT; flagella protein K02423 fliT; flagellar protein FliT
D PMI1670 motA; chemotaxis protein (motility protein A) K02556 motA; chemotaxis protein MotA
D PMI1669 motB; chemotaxis protein (motility protein B) K02557 motB; chemotaxis protein MotB
D PMI1656 flgM; negative regulator of flagellin synthesis (anti-sigma-28 factor) K02398 flgM; negative regulator of flagellin synthesis FlgM
D PMI1657 flgN; flagella synthesis protein K02399 flgN; flagellar biosynthesis protein FlgN
D PMI1617 fliZ; FliZ protein K02425 fliZ; regulator of sigma S factor FliZ
D PMI2372 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D PMI1672 flhD; flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D PMI1671 flhC; flagellar transcriptional activator K02402 flhC; flagellar transcriptional activator FlhC
D PMI3648 rpoN; RNA polymerase sigma-54 factor (sigma-N) K03092 rpoN; RNA polymerase sigma-54 factor
D PMI1618 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PMI0221 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D PMI2758 metH; methionine synthase (5-methyltetrahydrofolate--homocysteine methyltransferase) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pmr01501]
D PMI0765 ompF; outer membrane porin K09476 ompF; outer membrane pore protein F
D PMI0044 putative outer membrane protein K09476 ompF; outer membrane pore protein F
D PMI0111 ampG; Beta-lactamase induction signal transducer (MFS-family transporter) K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PMI0873 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PMI1475 oppA; oligopeptide ABC transporter, oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1367 mppA; periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1476 oppA2; oligopeptide ABC transporter, oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1474 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D PMI1473 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D PMI1472 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PMI1471 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PMI3510 conserved hypothetical protein K18148 rtcB; release factor H-coupled RctB family protein
D PMI0132 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PMI3598 multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D PMI0131 acrB; inner membrane rnd family protein acrb K18138 acrB; multidrug efflux pump
D PMI2349 tolC; outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PMI1266 channel-forming component of a multidrug resistance efflux pump K12340 tolC; outer membrane protein
D PMI3021 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMI0426 pbpA; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMI2076 ftsI; penicillin-binding protein (peptidoglycan synthetase protein) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pmr01502]
D PMI1243 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMI1508 dadB; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D PMI2742 alr; alanine racemase (biosynthetic) K01775 alr; alanine racemase [EC:5.1.1.1]
D PMI2074 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PMI2073 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMI2070 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pmr01503]
D PMI0884 phoQ; two-component sensor kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PMI0885 phoP; two-component response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PMI3576 putative sulfatase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D PMI1595 pagP; putative antimicrobial peptide resistance and lipid A acylation protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D PMI1043 arnB; UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D PMI1044 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D PMI1045 arnA; bifunctional polymyxin resistance protein [includes: UDP-glucuronic acid decarboxylase and UDP-4-amino-4-deoxy-l-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D PMI1046 putative polysaccharide deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D PMI1047 arnT; undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D PMI0275 arnT; putative undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D PMI1048 putative membrane protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D PMI1049 putative membrane protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D PMI1378 sapA; peptide transport periplasmic protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PMI1379 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D PMI1380 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D PMI1381 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D PMI1382 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D PMI0279 zapA; metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D PMI0281 zapE; putative metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D PMI0282 putative metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D PMI0283 putative metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D PMI0285 putative metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D PMI2265 cutF; putative copper homeostasis lipoprotein K06079 cutF; copper homeostasis protein (lipoprotein)
D PMI3198 cpxA; two-component system sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMI3199 cpxR; two component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PMI3362 amiB; N-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMI2306 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMI1410 putative peptidoglycan-binding protein K19236 ycfS; L,D-transpeptidase YcfS
D PMI2828 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PMI2823 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PMI0132 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PMI3598 multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D PMI0131 acrB; inner membrane rnd family protein acrb K18138 acrB; multidrug efflux pump
D PMI2349 tolC; outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PMI1266 channel-forming component of a multidrug resistance efflux pump K12340 tolC; outer membrane protein
D PMI2273 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pmr01000]
C 01001 Protein kinases [BR:pmr01001]
D PMI3125 hipA; putative regulatory protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PMI0054 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PMI0052 phoR; phosphate regulon sensor protein (two-component histidine kinase) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMI0884 phoQ; two-component sensor kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PMI2892 envZ; osmolarity sensor protein (two-component system sensor kinase) K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PMI3198 cpxA; two-component system sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMI1588 baeS; two-component system sensor kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D PMI1227 kdpD; two-component sensor kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PMI3678 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PMI1697 rssA; swarming motility regulation two-component system, sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PMI3569 narX; nitrate/nitrite teo-component system, sensor kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D PMI0192 two-component sensor kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D PMI1729 rsbA; swarming behavior regulation two-component system, sensor kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D PMI1731 rcsC; two component system, [includes both sensor kinase and response regulator domains] (capsular synthesis regulator component C) K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D PMI3431 two-component system sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D PMI2883 ntrB; nitrogen regulation protein NR(II) (two-component system sensor kinase) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PMI1874 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PMI2406 pgtB; putative phosphoglycerate transport system sensor kinase K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D PMI1668 cheA; chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PMI1684 ttrS; two component system sensor kinase of tetrathionate reductase complex K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pmr01009]
D PMI3203 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMI2185 htpG; chaperone protein HtpG (heat shock protein HtpG) K04079 HSP90A; molecular chaperone HtpG
D PMI2507 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pmr01002]
D PMI0016 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PMI0342 putative type IV prepilin-like leader peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D PMI0035 hybD; hydrogenase 2 maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D PMI2518 hycI; hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D PMI1545 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PMI0831 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PMI1050 nlpC; putative lipoprotein K13695 nlpC; probable lipoprotein NlpC
D PMI1783 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PMI3677 gltB; glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PMI3067 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMI0101 thiJ; DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D PMI0803 putative exported peptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PMI0400 hypothetical protein K18015 elaD; deubiquitinase [EC:3.4.22.-]
D PMI1410 putative peptidoglycan-binding protein K19236 ycfS; L,D-transpeptidase YcfS
D PMI0730 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D PMI2196 putative membrane-associated CAAX amino terminal protease K07052 K07052; CAAX protease family protein
D PMI0769 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PMI3005 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PMI0279 zapA; metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D PMI0281 zapE; putative metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D PMI0282 putative metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D PMI0283 putative metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D PMI0285 putative metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D PMI1985 phage protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D PMI2310 ptrA; protease III precursor K01407 ptrA; protease III [EC:3.4.24.55]
D PMI3704 probable exported protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D PMI2840 putative insulinase (Peptidase family M16) K07263 pqqL; zinc protease [EC:3.4.24.-]
D PMI3464 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PMI1853 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D PMI3080 putative amidohydrolase/metallopeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D PMI1556 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PMI0147 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PMI0882 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PMI0364 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PMI3674 probable aminohydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A
D PMI1153 putative peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D PMI2286 map2; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PMI0997 map1; putative methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PMI3551 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PMI1865 peptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PMI2024 pepP; Xaa-proline aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PMI3412 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMI0166 putative membrane-associated peptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PMI1018 htpX; probable protease (heat shock protein) K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PMI3613 putative peptidase K07387 K07387; metalloprotease [EC:3.4.24.-]
D PMI1568 putative exported protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D PMI2278 ecfE; protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PMI3666 degQ; protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D PMI3665 degS; protease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D PMI2738 putative serine protease K13277 epr; minor extracellular protease Epr [EC:3.4.21.-]
D PMI1549 ptrB; protease II (oligopeptidase B) K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PMI0423 dacA; putative penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMI0669 dacC; penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMI3467 ampH; putative penicillin-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D PMI3408 dacB; penicillin-binding protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PMI0115 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PMI0117 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PMI0783 conserved hypothetical protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D PMI2749 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PMI2484 umuD; DNA repair protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PMI1889 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMI1016 prc; tail-specific protease precursor (C-terminal-processing peptidase) K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PMI1499 sppA; protease IV (signal peptide peptidase) K04773 sppA; protease IV [EC:3.4.21.-]
D PMI1336 sohB; probable protease K04774 sohB; serine protease SohB [EC:3.4.21.-]
D PMI3545 pepE; dipeptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D PMI2928 glpG; putative membrane protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D PMI0926 putative head maturation protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D PMI3216 hslV; ATP-dependent protease HslV (heat shock protein) K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PMI1222 putative exported L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PMI0072 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PMI1590 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PMI3441 protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D PMI3442 protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D PMI3642 tldE; putative modulator of DNA gyrase K03592 pmbA; PmbA protein
D PMI3638 tldD; putative modulator of DNA gyrase K03568 tldD; TldD protein
D PMI1955 eco; ecotin precursor K08276 eco; ecotin
D PMI1851 alpha-2-macroglobulin-like lipoprotein (putative endopeptidase inhibitor) K06894 yfhM; alpha-2-macroglobulin
D PMI3368 hflC; HflC protein (putative regulator of FtsH protease) K04087 hflC; modulator of FtsH protease HflC
D PMI3367 hflK; HflK protein (putative regulator of FtsH protease) K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:pmr01003]
D PMI3097 putative cellulose synthase catalytic subunit [UDP-forming] K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D PMI2099 bcsA; cellulose synthase catalytic subunit [UDP-forming] K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D PMI3680 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PMI1850 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PMI0204 mrcB; penicillin-binding protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PMI3021 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMI3327 rffM; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D PMI3325 rffT; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D PMI3316 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pmr01005]
D PMI2273 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PMI2272 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PMI2064 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PMI2275 lpxD; UDP-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PMI2160 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PMI0719 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PMI1686 htrB; lipid A biosynthesis lauroyl acyltransferase (heat shock protein B) K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PMI1154 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D PMI0808 ddg; cold-induced palmitoleoyl transferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D PMI0832 putative membrane-associated phosphatase K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D PMI3167 waaA; KDO transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PMI1047 arnT; undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D PMI0275 arnT; putative undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D PMI1595 pagP; putative antimicrobial peptide resistance and lipid A acylation protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D PMI3576 putative sulfatase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D PMI1090 kdsA; 2-dehydro-3-deoxyphosphooctulonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PMI0722 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PMI3652 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PMI3653 kdsD; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PMI3174 waaC; lipopolysaccharide heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PMI3166 waaE; lipopolysaccharide core biosynthesis glycosyl transferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D PMI3175 waaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PMI3169 wabG; lipopolysaccharide core biosynthesis glycosyl transferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D PMI2517 putative glycosyltransferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D PMI3163 rfaL; O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D PMI3168 waaQ; lipopolysaccharide core biosynthesis glycosyl transferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D PMI3160 glycosyl transferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D PMI0349 gmhA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PMI2258 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PMI2358 rfaE; bifunctional protein HldE [includes: D-beta-D-heptose 7-phosphate kinase and D-beta-D-heptose 1-phosphate adenosyltransferase] K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PMI3176 waaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PMI3326 wzyE; putative ECA polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D PMI3316 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmr01011]
D PMI3661 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMI3248 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMI2069 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PMI2072 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMI2075 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMI1243 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMI1508 dadB; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D PMI2742 alr; alanine racemase (biosynthetic) K01775 alr; alanine racemase [EC:5.1.1.1]
D PMI3247 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PMI2073 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMI2070 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PMI0673 putative membrane-associated phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PMI1101 mviN; putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D PMI3021 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMI0204 mrcB; penicillin-binding protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PMI1850 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PMI0426 pbpA; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMI2076 ftsI; penicillin-binding protein (peptidoglycan synthetase protein) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMI0423 dacA; putative penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMI0669 dacC; penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMI3408 dacB; penicillin-binding protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PMI3467 ampH; putative penicillin-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D PMI3680 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PMI1410 putative peptidoglycan-binding protein K19236 ycfS; L,D-transpeptidase YcfS
D PMI0730 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D PMI0831 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PMI1153 putative peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D PMI1985 phage protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D PMI3713 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PMI2305 mltA; membrane-bound lytic murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D PMI1172 putative lipoprotein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PMI0324 mltC; membrane-bound lytic murein transglycosylase K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D PMI0224 mltD; membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D PMI1028 putative membrane-bound lytic murein transglycosylase K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D PMI1876 putative transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D PMI0865 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PMI0424 rlpA; rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PMI3362 amiB; N-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMI2306 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMI1600 probable N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMI2048 ampD; N-acetylmuramoyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMI1409 lpp; major outer membrane lipoprotein (murein-lipoprotein) K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:pmr01004]
D PMI0860 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMI2902 putative transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMI0859 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PMI1795 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMI0754 putative exported protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMI0863 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMI0861 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI3202 probable short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI2912 putative 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMI0782 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PMI2274 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMI1383 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMI2167 tesA; acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PMI0128 tesB; acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PMI1354 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D PMI0121 conserved hypothetical protein K12500 tesC; thioesterase III [EC:3.1.2.-]
D PMI2600 nrpS; putative non-ribosomal peptide synthase (putative siderophore synthase) K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D PMI2599 putative non-ribosomal peptide synthase (putative siderophore synthase) K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D PMI3037 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMI2081 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMI1166 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMI2751 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PMI0858 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PMI2364 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMI2343 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pmr01008]
D PMI2600 nrpS; putative non-ribosomal peptide synthase (putative siderophore synthase) K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D PMI2599 putative non-ribosomal peptide synthase (putative siderophore synthase) K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D PMI2601 nrpU; putative siderophore biosynthetic protein K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D PMI2602 nrpT; putative siderophore biosynthetic protein (thioesterase) K05374 irp4; yersiniabactin synthetase, thioesterase component
C 01006 Prenyltransferases [BR:pmr01006]
D PMI0095 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PMI3404 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PMI2280 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PMI3364 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PMI3214 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PMI2752 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PMI0105 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pmr01007]
D PMI1818 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMI0539 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PMI1386 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMI1728 putative tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PMI3032 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PMI2158 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMI1103 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMI0646 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMI0015 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMI3462 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMI0433 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMI2008 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMI1111 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMI0766 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PMI1844 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMI2854 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMI2855 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMI0700 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMI2264 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMI1034 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMI0376 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMI1038 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMI1039 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMI0764 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMI2852 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D PMI1765 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMI2743 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PMI0663 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI1463 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMI3177 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PMI0604 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PMI1275 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMI2821 argD; acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PMI0602 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PMI0205 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PMI1701 putative D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PMI3301 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMI0711 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PMI1043 arnB; UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D PMI3323 rffA; lipopolysaccharide biosynthesis aminotransferase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pmr00194]
D PMI3065 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PMI3064 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PMI3063 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PMI3062 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PMI3061 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PMI3060 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMI3059 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PMI3058 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMI3057 atpI; ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pmr03000]
D PMI2953 chbR; cel operon repressor K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D PMI1597 AraC-family transcriptional regulator K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMI3717 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMI0804 rob; putative putative right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMI1178 AraC-family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMI1052 pqrA; AraC-family transcriptional regulator K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D PMI0917 putative transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D PMI1962 AraC-family transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D PMI1240 ada; regulatory protein of adaptative response [contains: methylated-DNA--protein-cysteine methyltransferase] K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PMI2301 gcvA; glycine cleavage system transcriptional activator (LysR-family transcriptional regulator) K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PMI3304 ilvY; LysR-family transcriptional regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D PMI3528 metR; LysR-family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D PMI0012 nhaR; transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D PMI3241 oxyR; hydrogen peroxide-inducible genes activator (LysR-family transcriptional regulator) K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PMI2033 iciA; chromosome initiation inhibitor (LysR-family transcriptional regulator) K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D PMI2082 leuO; LysR-family transcriptional regulator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D PMI2197 LysR-family transcriptional regulator K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D PMI1322 cysB; cys regulon transcriptional activator (LysR-family transcriptional regulator) K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D PMI3231 cysB; cys regulon transcriptional activator (LysR-family transcriptional regulator) K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D PMI0184 dsdC; D-serine deaminase activator (LysR-family transcriptional regulator) K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D PMI3295 hdfR; H-NS-depdendent flhDC regulator (LysR-family transcriptional regulator) K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D PMI3511 deoR; putative deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D PMI2929 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PMI2141 agaR; putative aga operon transcriptional repressor (DeoR-family transcriptional regulator) K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D PMI0088 rbsR; ribose operon repressor (LacI-family transcriptional regulator) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PMI1947 galR; galactose operon repressor (LacI-family transcriptional regulator) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PMI1276 xylR; xylose operon regulator (AraC-family transcriptional regulator) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PMI3218 cytR; LacI-family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D PMI2934 putative LacI-family transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D PMI2080 fruR; putative fructose repressor (catabolite repressor/activator) (LacI-family transcriptional regulator) K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D PMI0293 treR; trehalose operon repressor (LacI-family transcriptional regulator) K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D PMI1399 purR; purine nucleotide synthesis repressor (LacI-family transcriptional regulator) K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D PMI2674 gntR; gluconate utilization system Gnt-I transcriptional repressor (LacI-family transcriptional regulator) K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D PMI1510 fadR; fatty acid metabolism regulatory protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D PMI2047 pdhR; pyruvate dehydrogenase complex repressor (GntR-family transcriptional regulator) K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PMI1054 GntR-family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PMI2398 tetRJ; tetracycline repressor protein K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D PMI3082 TetR-family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D PMI1461 betI; TetR-family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D PMI0133 acrR; acrAB operon repressor (tetR-family transcriptional regulator) K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D PMI3153 slmA; TetR-family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D PMI0305 TetR-family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PMI3243 TetR-family transcriptional regulatory K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D PMI0619 TetR-family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D PMI1864 TetR-family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D PMI3053 asnC; AsnC-family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PMI0696 lrp; leucine-responsive regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PMI0123 AsnC-family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PMI1431 AsnC-family transcriptional regulator K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon
D PMI1390 slyA; MarR-family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D PMI0407 emrR; MarR-family transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D PMI1820 MarR-family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PMI2060 MerR-family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PMI2172 cueR; MerR-family transcriptional regulator (copper efflux regulator) K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PMI3282 zntR; Zn(II)-responsive regulator of zntA (MerR-family transcriptional regulator) K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D PMI2705 soxR; redox-sensitive transcriptional activator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D PMI0543 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PMI2748 zur; zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PMI2759 iclR; acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D PMI2820 crp; catabolite gene activator (cAMP receptor protein) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PMI1203 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PMI1861 iscR; putative iron-sulfur cluster transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D PMI3371 putative transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D PMI2153 arsR; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PMI3522 putative transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D PMI2814 RpiR-family transcriptional regulator K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D PMI1156 hexR; hex regulon repressor (RpiR-family transcriptional regulator) K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D PMI3249 birA; BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-coa-carboxylase] synthetase] K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PMI3622 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PMI3714 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D PMI3401 sfsB; sugar fermentation stimulation protein K07724 ner; Ner family transcriptional regulator
D PMI0960 phage protein K07724 ner; Ner family transcriptional regulator
D PMI2088 putative solute-binding protein K11925 sgrR; SgrR family transcriptional regulator
D PMI2505 nadR; transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D PMI3126 hipB; transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D PMI2876 putative plasmid-related protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D PMI3496 putative phage-related protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PMI0595 modR; molybdenum transport regulatory protein K02019 modE; molybdate transport system regulatory protein
D PMI2857 putative regulatory protein K07726 K07726; putative transcriptional regulator
D PMI3201 putative DNA-binding protein K07726 K07726; putative transcriptional regulator
D PMI0554 putative transcriptional regulator K07726 K07726; putative transcriptional regulator
D PMI3222 metJ; repressor of the methionine regulon K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D PMI1616 putA; bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PMI2227 transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D PMI0451 conserved hypothetical protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D PMI0113 bolA; BolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D PMI3542 rfaH; transcriptional activator K05785 rfaH; transcriptional antiterminator RfaH
D PMI3399 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PMI0452 nagC; putative N-acetylglucosamine regulatory protein K02565 nagC; N-acetylglucosamine repressor
D PMI1292 mlc; protein Mlc (making large colonies protein) (ROK-family transcriptional regulator) K15545 mlc; transcriptional regulator of PTS gene
D PMI1369 tyrR; transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D PMI1565 gcvR; glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D PMI1377 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D PMI1374 pspC; phage shock protein C K03973 pspC; phage shock protein C
D PMI1540 putative transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D PMI3643 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D PMI2608 putative prophage regulatory protein K07733 alpA; prophage regulatory protein
D PMI3478 putative phage regulatory protein K07733 alpA; prophage regulatory protein
D PMI0339 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D PMI2660 caiF; transcriptional activator for carnitine metabolism K08277 caiF; transcriptional activator CaiF
D PMI0200 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PMI0080 ribX; putative ATP-binding regulatory protein K07738 nrdR; transcriptional repressor NrdR
D PMI0368 crl; curlin genes transcriptional regulator K11926 crl; sigma factor-binding protein Crl
D PMI2079 mraZ; conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pmr03021]
D PMI3280 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMI2785 rpoB; DNA-directed RNA polymerase, beta-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMI2784 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMI2863 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PMI2372 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D PMI2236 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D PMI1894 rpoE; RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PMI3608 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D PMI3648 rpoN; RNA polymerase sigma-54 factor (sigma-N) K03092 rpoN; RNA polymerase sigma-54 factor
D PMI1618 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D PMI2328 rapA; RNA polymerase-associated protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D PMI3417 nusA; transcription elongation protein (N utilization substance protein A) K02600 nusA; transcription termination/antitermination protein NusA
D PMI0083 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D PMI2790 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D PMI3671 sspA; putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D PMI3672 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D PMI1893 rseA; anti sigma E protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D PMI1892 rseB; anti sigma E (sigma 24) factor, negative regulator K03598 rseB; sigma-E factor negative regulatory protein RseB
D PMI1891 rseC; sigma-E factor regulatory protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D PMI0200 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PMI3409 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D PMI2890 greB; transcription elongation factor K04760 greB; transcription elongation factor GreB
D PMI3314 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PMI2266 rof; Rho-binding antiterminator K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:pmr03019]
D PMI0852 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMI3635 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PMI1888 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMI3372 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMI3357 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PMI3312 rhlB; ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PMI0620 rhlE; putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PMI3424 deaD; cold-shock DEAD box protein A (ATP-dependent RNA helicase) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMI3345 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PMI0221 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMI3422 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PMI3314 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PMI3203 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMI0009 dnaK; chaperone protein DnaK (heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D PMI2543 groL; 60 Kda chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMI3365 hfq; protein Hfq (host factor-I protein) K03666 hfq; host factor-I protein
D PMI1578 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PMI0198 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PMI2321 nudH; (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PMI0377 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D PMI3213 rraA; regulator of ribonuclease activity K02553 rraA; regulator of ribonuclease activity A
D PMI3458 conserved hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D PMI3645 putative P-loop ATPase K06958 rapZ; RNase adapter protein RapZ
D PMI1192 hrpA; ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D PMI0203 hrpB; ATP-dependent RNA helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pmr03011]
D PMI0715 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PMI2285 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PMI3261 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PMI3279 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PMI3272 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PMI3374 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PMI2794 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PMI3269 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PMI3670 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PMI3254 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PMI3278 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PMI2795 rpsl; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PMI3277 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PMI3268 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PMI3421 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PMI0383 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PMI3264 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PMI3376 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PMI3259 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PMI0013 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PMI2370 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PMI2788 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PMI3258 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PMI3255 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PMI3256 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PMI3267 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PMI3270 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PMI3377 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PMI2787 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PMI2789 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PMI2786 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PMI3669 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PMI3265 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PMI3274 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PMI3262 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PMI3281 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PMI3271 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PMI0386 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PMI1037 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PMI3405 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PMI3260 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PMI3257 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PMI3266 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PMI3406 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PMI3157 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PMI3263 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PMI3273 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PMI3379 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PMI3220 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PMI0857 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PMI3158 rpmG; 50S ribosomal rotein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PMI3131 rpmH; 50s ribosomal protein l34 K02914 RP-L34; large subunit ribosomal protein L34
D PMI1036 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PMI3276 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PMI0826 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D 5S_rRNA-1 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-8 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-4 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-5 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-3 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-2 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-7 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-6 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 16S_rRNA-2 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16SrRNA-1 16SrRNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-1 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-3 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16SrRNA-2 16SrRNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-4 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-5 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-1 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-2 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-4 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-3 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23SrRNA-2 23SrRNA K01980 23SrRNA; 23S ribosomal RNA
D 23SrRNA-1 23SrRNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-5 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pmr03009]
D PMI1888 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMI3357 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PMI1887 era; GTP-binding protein K03595 era; GTPase
D PMI3407 putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D PMI0200 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PMI3417 nusA; transcription elongation protein (N utilization substance protein A) K02600 nusA; transcription termination/antitermination protein NusA
D PMI0083 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D PMI2790 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D PMI0828 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D PMI2334 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PMI3286 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PMI2496 rsmC; ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PMI3604 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PMI0341 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PMI3056 gidB; methyltransferase (glucose-inhibited division protein B) K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PMI2078 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PMI3693 putative tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PMI3006 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D PMI1609 rrmA; ribosomal RNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PMI3373 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PMI3411 ftsJ; ribosomal RNA large subunit methyltransferase J (cell division protein FtsJ) K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D PMI0427 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PMI2836 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D PMI0774 putative RNA methylase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D PMI2299 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D PMI1848 radical SAM superfamily protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PMI0216 rumA; 23S rRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PMI0678 rumB; putative 23S rRNA (uracil-5-)-methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D PMI2985 rluA; putative ribosomal large subunit pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PMI2329 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PMI1340 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PMI0853 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D PMI0393 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PMI0890 rluE; ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D PMI2872 rluF; ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D PMI0401 putative tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D PMI2494 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PMI1100 rimJ; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D PMI0384 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D PMI3181 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PMI0707 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D PMI3624 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PMI1803 putative methylase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D PMI0883 conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D PMI0852 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMI3635 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PMI0338 putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PMI0110 dbpA; ATP-independent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D PMI3424 deaD; cold-shock DEAD box protein A (ATP-dependent RNA helicase) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMI1897 srmB; ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D PMI3356 engC; probable GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PMI1841 engA; GTP-binding protein K03977 engA; GTPase
D PMI3366 hflX; GTP-binding protein K03665 hflX; GTPase
D PMI3291 putative RNA-binding protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PMI2864 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PMI3419 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PMI3416 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D PMI2156 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D PMI0428 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D PMI0445 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D PMI3410 putative RNA-binding protein K07574 yhbY; RNA-binding protein
D PMI3641 conserved hypothetical protein K09889 yjgA; ribosome-associated protein
D PMI0781 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D PMI3647 probable sigma(54) modulation protein K05808 hpf; ribosome hibernation promoting factor
D PMI0391 putative sigma 54 modulation protein K05809 raiA; ribosome-associated inhibitor A
D PMI1080 engD; GTP-dependent nucleic acid-binding protein K06942 ychF; ribosome-binding ATPase
D PMI0856 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pmr03016]
D PMI0252 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PMI0046 putative lipoprotein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D PMI2362 cca; multifunctional Cca protein [includes: tRNA nucleotidyltransferase; 2'-nucleotidase and 2',3'-cyclic phosphodiesterase] K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PMI1818 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMI2264 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMI0015 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMI0433 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMI0646 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMI0539 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PMI1103 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMI2008 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMI1111 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMI0376 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMI0766 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PMI1034 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMI0700 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMI2158 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMI3462 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMI1844 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMI1038 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMI1039 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMI1386 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMI1728 putative tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PMI3032 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PMI2874 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PMI0869 putative nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PMI0327 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PMI2263 conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D PMI1789 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PMI3420 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PMI2240 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D PMI1860 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMI3291 putative RNA-binding protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PMI3364 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PMI3127 trmE; probable tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PMI3055 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PMI1497 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PMI3385 cysQ; inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PMI3130 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PMI1393 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D PMI3151 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PMI1311 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D PMI1167 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PMI3712 ABC transporter ATP-binding component K06020 ettA; energy-dependent translational throttle protein EttA
D PMI2854 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMI2855 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMI2176 putative oligo-nucleotide binding protein (putative suppressor of ushA transcription) K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PMI0656 conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PMI1882 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PMI2739 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PMI3623 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PMI0621 dusC; tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D PMI0447 miaB; MiaB protein (methylthiolation of isopentenylated A37 derivatives in rRNA) K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PMI1109 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PMI1108 conserved hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D PMI0724 smtA; S-adenosylmethionine-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D PMI3245 trmA; tRNA (uracil-5)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D PMI0385 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PMI0401 putative tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D PMI2865 trmH; tRNA (guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D PMI1862 hypothetical tRNA/rRNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D PMI3187 putative methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PMI1896 conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D PMI2293 truC; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D PMI2985 rluA; putative ribosomal large subunit pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PMI2329 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PMI0888 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PMI1363 conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PMI3597 sirA; sulfurtransferase (tRNA 2-thiouridine synthesizing protein A) K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PMI2796 putative intracellular sulfur oxidation protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PMI2797 putative intracellular sulfur oxidation protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PMI2798 putative intracellular sulfur oxidation protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PMI0794 putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PMI1858 iscA; iron-binding protein (iron-sulfur cluster assembly protein) K13628 iscA; iron-sulfur cluster assembly protein
D PMI2017 putative aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ
D PMI1796 putative FAD-dependent oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D PMI0075 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PMI0122 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PMI2251 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PMI2252 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PMI2296 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PMI3360 putative 4Fe-4S binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PMI1262 putative ATP-binding protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D PMI0076 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PMI0097 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PMI2267 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PMI1559 putative acetyltransferase/ATPase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D PMI1164 rpf; resuscitation-promoting factor (putative glycoprotease) K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PMI2369 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PMI3361 putative ATP/GTP hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PMI2304 conserved hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PMI3372 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMI3422 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PMI2879 vagD; putative plasmid-related protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:pmr03012]
D PMI1312 putative translation initiaiton factor K03113 EIF1; translation initiation factor 1
D PMI3418 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PMI1035 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PMI2807 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PMI1242 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PMI2284 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PMI2792 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D PMI3251 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D PMI2793 fusA; elongation factor G (EF-G) K02355 fusA; elongation factor G
D PMI3105 selB; selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D PMI1087 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PMI2282 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D PMI1088 hemK; protein methyltransferase (protein-glutamine N-methyltransferase) K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PMI1081 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PMI0691 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PMI2530 efp; elongation factor P K02356 efp; elongation factor P
D PMI0835 elongation factor P-like protein K02356 efp; elongation factor P
D PMI3589 poxA; putative lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D PMI2531 radical SAM superfamily protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D PMI1800 conserved hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D PMI2009 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PMI2422 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D PMI3509 prfH; probable peptide chain release factor K02839 prfH; peptide chain release factor
D PMI3283 conserved hypothetical protein K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:pmr03110]
D PMI0690 clpA; ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D PMI0395 clpB; chaperone ClpB (heat-shock protein F84.1) K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PMI0116 clpX; ATP-dependent Clp protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PMI3215 hslU; ATP-dependent Hsl protease, ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PMI2185 htpG; chaperone protein HtpG (heat shock protein HtpG) K04079 HSP90A; molecular chaperone HtpG
D PMI0009 dnaK; chaperone protein DnaK (heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D PMI1856 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D PMI1268 putative ATP-binding/heat shock protein K04046 yegD; hypothetical chaperone protein
D PMI2543 groL; 60 Kda chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMI0010 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PMI0799 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D PMI2330 djlA; DnaJ-like chaperone protein K05801 djlA; DnaJ like chaperone protein
D PMI1857 hscB; co-chaperone protein HscB K04082 hscB; molecular chaperone HscB
D PMI3016 hslO; heat-shock chaperonin K04083 hslO; molecular chaperone Hsp33
D PMI1900 grpE; heat shock protein K03687 GRPE; molecular chaperone GrpE
D PMI0973 putative heat shock protein K04080 ibpA; molecular chaperone IbpA
D PMI3017 hslR; heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D PMI2544 groS; 10 Kda chaperonin K04078 groES; chaperonin GroES
D PMI3412 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMI3058 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMI1467 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D PMI3436 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI2534 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI2729 atfB; type 1 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D PMI3350 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI1063 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI3183 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D PMI3200 cpxP; periplasmic protein K06006 cpxP; periplasmic protein CpxP/Spy
D PMI3582 hybF; probable hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D PMI0037 hypB; hydrogenase nickel incorporation protein K04652 hypB; hydrogenase nickel incorporation protein HypB
D PMI2738 putative serine protease K13277 epr; minor extracellular protease Epr [EC:3.4.21.-]
D PMI2823 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PMI2159 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PMI0119 ppiD; peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PMI2801 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D PMI3384 fklB; FkbP-type 22 kDa peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PMI0017 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D PMI2803 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PMI2332 surA; chaperone SurA protein (peptidyl-prolyl cis-trans isomerase) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PMI3313 trxA; thioredoxin K03671 TXN; thioredoxin
D PMI2169 putative thioredoxin K05838 ybbN; putative thioredoxin
D PMI0675 grxA; glutaredoxin K03674 grxA; glutaredoxin 1
D PMI1394 putative glutaredoxin K07390 grxD; monothiol glutaredoxin
D PMI2828 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PMI1512 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D PMI2011 dsbC; thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PMI2462 putative plasmid-related disulfide bond isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
C 04131 Membrane trafficking [BR:pmr04131]
D PMI1849 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMI1504 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMI0590 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMI2409 putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI1155 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI1405 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI2185 htpG; chaperone protein HtpG (heat shock protein HtpG) K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:pmr04121]
C 03051 Proteasome [BR:pmr03051]
D PMI2185 htpG; chaperone protein HtpG (heat shock protein HtpG) K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pmr03032]
D PMI0227 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PMI2771 hupA; DNA-binding protein HU-alpha (HU-2) K05787 hupA; DNA-binding protein HU-alpha
D PMI0118 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PMI1040 ihfA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D PMI0716 ihfB; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D PMI3132 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D PMI0483 putative phage replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMI2640 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMI2741 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMI2371 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PMI2449 putative plasmid-related single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMI2747 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI0899 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI2270 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMI3133 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMI3463 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMI0431 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMI0867 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMI0228 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMI2483 putative plasmid-related exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMI0139 dnaX; DNA polymerase III Tau subunit (contains DNA polymerase III Gamma subunit) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMI2495 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMI1602 holE2; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMI0538 holE1; putative DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMI2271 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PMI2826 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMI1823 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMI1295 tus; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D PMI1999 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMI3029 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMI0547 seqA; putative negative regulator of replication initiation K03645 seqA; negative modulator of initiation of replication
D PMI1571 hda; DnaA-homolog protein K10763 hda; DnaA-homolog protein
D PMI1732 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PMI3135 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PMI2344 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PMI2345 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PMI1334 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PMI2630 topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D PMI1496 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D PMIP25 traE; DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pmr03036]
D PMI1888 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMI1488 hns; DNA-binding protein (histone-like structuring protein) K03746 hns; DNA-binding protein H-NS
D PMIP26 HN-S family DNA-binding protein K11685 stpA; DNA-binding protein StpA
D PMI2771 hupA; DNA-binding protein HU-alpha (HU-2) K05787 hupA; DNA-binding protein HU-alpha
D PMI0118 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PMI1040 ihfA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D PMI0716 ihfB; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D PMI0799 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D PMI0800 cbpM; chaperone-modulator protein K18997 cbpM; chaperone modulatory protein CbpM
D PMI3717 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMI0804 rob; putative putative right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMI1178 AraC-family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMI3132 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D PMI3690 diaA; DnaA initiator-associating protein K12961 diaA; DnaA initiator-associating protein
D PMI0792 conserved hypothetical protein K11940 hspQ; heat shock protein HspQ
D PMI1804 ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D PMI0631 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D PMI3622 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PMI3365 hfq; protein Hfq (host factor-I protein) K03666 hfq; host factor-I protein
D PMI2033 iciA; chromosome initiation inhibitor (LysR-family transcriptional regulator) K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D PMI0696 lrp; leucine-responsive regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PMI0825 ndpA; nucleoid-asociated protein K06899 ndpA; nucleoid-associated protein
D PMI3474 putative phage protein K06899 ndpA; nucleoid-associated protein
D PMI0727 mukB; chromosome partition protein K03632 mukB; chromosome partition protein MukB
D PMI0726 mukE; chromosome partition protein K03804 mukE; chromosome partition protein MukE
D PMI0725 mukF; chromosome partition protein K03633 mukF; chromosome partition protein MukF
D PMI2066 ftsA; cell division protein K03590 ftsA; cell division protein FtsA
D PMI2243 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D PMI3606 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PMI2076 ftsI; penicillin-binding protein (peptidoglycan synthetase protein) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMI0697 ftsK; putative cell division protein (DNA translocase) K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PMI1912 FtsK/SpoIIIE-family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PMI2077 ftsL; cell division protein K03586 ftsL; cell division protein FtsL
D PMI3217 ftsN; cell division protein K03591 ftsN; cell division protein FtsN
D PMI2067 ftsQ; cell division protein K03589 ftsQ; cell division protein FtsQ
D PMI2071 ftsW; cell division protein K03588 ftsW; cell division protein FtsW
D PMI3607 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D PMI2065 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D PMI1824 zipA; cell division protein K03528 zipA; cell division protein ZipA
D PMI2026 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D PMI3212 conserved hypothetical protein K09892 zapB; cell division protein ZapB
D PMI0772 conserved hypothetical protein K18657 zapC; cell division protein ZapC
D PMI2053 conserved hypothetical protein K18778 zapD; cell division protein ZapD
D PMI3668 putative ATPase K06916 zapE; cell division protein ZapE
D PMI3378 putative membrane protein K07269 ytfB; cell division protein YtfB
D PMI3362 amiB; N-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMI2306 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMI0132 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PMI3598 multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D PMI1170 minC; septum site-determining protein K03610 minC; septum site-determining protein MinC
D PMI1169 minD; septum site-determining protein K03609 minD; septum site-determining protein MinD
D PMI1168 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D PMI0786 sulA; cell division inhibitor K13053 sulA; cell division inhibitor SulA
D PMI3153 slmA; TetR-family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D PMI0547 seqA; putative negative regulator of replication initiation K03645 seqA; negative modulator of initiation of replication
D PMI3631 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PMI3632 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D PMI3633 mreD; rod shape-determining protein K03571 mreD; rod shape-determining protein MreD
D PMI0425 rodA; rod shape-determining protein K05837 rodA; rod shape determining protein RodA
D PMI0515 EP0005; putative phage replication protein K03496 parA; chromosome partitioning protein
D PMIP34 putative plasmid stability/partitioning protein K03496 parA; chromosome partitioning protein
D PMI2344 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PMI2345 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PMI3055 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme (glucose-inhibited division protein A) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PMI3056 gidB; methyltransferase (glucose-inhibited division protein B) K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PMI3338 xerC; tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D PMI2012 xerD; tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D PMI1221 putative integrase/recombinase K04763 xerD; integrase/recombinase XerD
D PMI0648 putative ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PMI2229 putative cell filamentation protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PMI2824 engB; probable GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pmr03400]
D PMI0417 ogt; putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PMI3229 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PMI1899 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PMI0326 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PMI1310 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PMI2055 mutT; mutator MutT protein (dGTP pyrophosphohydrolase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PMI2395 NUDIX-family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PMI0837 MutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PMI3154 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PMI1240 ada; regulatory protein of adaptative response [contains: methylated-DNA--protein-cysteine methyltransferase] K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PMI1239 probable base excision DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PMI2853 tag; DNA-3-methyladenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PMI3164 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PMI1495 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PMI0838 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PMI2773 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D PMI2010 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMI1823 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMI2826 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMI2746 uvrA; UvrABC excision repair system proteinA (excinuclease ABC subunit A) K03701 uvrA; excinuclease ABC subunit A
D PMI0607 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PMI1521 uvrC; UvrABC system protein C (excinuclease ABC subunit C) K03703 uvrC; excinuclease ABC subunit C
D PMI3340 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMI2785 rpoB; DNA-directed RNA polymerase, beta-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMI2784 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMI3280 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMI2863 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PMI0877 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PMI2235 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D PMI3363 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D PMI2089 mutH; DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D PMI0848 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PMI1547 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PMI0096 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PMI2270 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMI3133 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMI3463 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMI0431 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMI0867 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMI0228 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMI2483 putative plasmid-related exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMI0139 dnaX; DNA polymerase III Tau subunit (contains DNA polymerase III Gamma subunit) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMI2495 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMI1602 holE2; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMI0538 holE1; putative DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMI2449 putative plasmid-related single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMI2747 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI0899 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI1999 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMI3029 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMI2309 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PMI2311 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PMI2308 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PMI0375 recA; protein RecA (recombinase A) K03553 recA; recombination protein RecA
D PMI1115 ruvA; Holliday junction ATP-dependent DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D PMI1116 ruvB; Holliday junction ATP-dependent DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PMI1114 ruvC; Holliday junction nuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PMI3219 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PMI3375 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D PMI0137 priC; primosomal replication protein N'' K04067 priC; primosomal replication protein N''
D PMI0049 sbcC; exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50
D PMI0050 sbcD; exonuclease subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D PMI2506 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D PMI3134 recF; dna replication and repair protein K03629 recF; DNA replication and repair protein RecF
D PMI2866 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PMI1886 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D PMI0141 recR; recombination protein K06187 recR; recombination protein RecR
D PMI1902 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PMI0043 rdgC; recombination associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D PMI0827 putative helicase K19789 radD; DNA repair protein RadD
D PMI1732 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PMI3135 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PMI1334 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PMI2771 hupA; DNA-binding protein HU-alpha (HU-2) K05787 hupA; DNA-binding protein HU-alpha
D PMI0118 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PMI0467 recT; phage DNA recombinase K07455 recT; recombination protein RecT
D PMI3622 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PMI1040 ihfA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D PMI0716 ihfB; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D PMI3345 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PMI1488 hns; DNA-binding protein (histone-like structuring protein) K03746 hns; DNA-binding protein H-NS
D PMI0362 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PMI2485 umuC; DNA repair protein K03502 umuC; DNA polymerase V
D PMI2484 umuD; DNA repair protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PMI2749 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PMI2327 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D PMI1958 putative DNA-damage-inducible protein K12149 dinI; DNA-damage-inducible protein I
D PMI2663 putative regulatory protein K03565 recX; regulatory protein
D PMI3310 rep; ATP-dependent DNA helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D PMI0789 helD; putative helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D PMI0630 dinG; putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PMI1163 putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PMI0414 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMI1734 nrdA; ribonucleoside-diphosphate reductase 1 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMI0413 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMI1735 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pmr03029]
D PMI3418 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PMI1035 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PMI2284 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PMI2792 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D PMI3251 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D PMI2793 fusA; elongation factor G (EF-G) K02355 fusA; elongation factor G
D PMI1887 era; GTP-binding protein K03595 era; GTPase
D PMI1386 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMI0433 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMI1111 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMI1103 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMI2449 putative plasmid-related single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMI2747 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI0899 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PMI2277 yaeT; outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D PMI0009 dnaK; chaperone protein DnaK (heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D PMI1900 grpE; heat shock protein K03687 GRPE; molecular chaperone GrpE
D PMI2543 groL; 60 Kda chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMI2544 groS; 10 Kda chaperonin K04078 groES; chaperonin GroES
D PMI0010 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PMI1860 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMI1857 hscB; co-chaperone protein HscB K04082 hscB; molecular chaperone HscB
D PMI1394 putative glutaredoxin K07390 grxD; monothiol glutaredoxin
D PMI0648 putative ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PMI0105 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PMI3128 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMI2185 htpG; chaperone protein HtpG (heat shock protein HtpG) K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pmr02000]
D PMI2603 nrpA; putative siderophore ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D PMI2604 nrpB; putative siderophore ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D PMI0718 msbA; lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PMI0124 mdlA; putative efflux ABC transporter, ATP-binding membrane protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMI0125 mdlB; putative efflux ABC transporter, ATP-binding membrane protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMI2028 putative toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D PMI2030 putative toxin transporter K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D PMI0278 zapB; Type I secretion ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PMI0693 cydC; ABC transporter, ATP-binding and permease protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PMI0694 cydD; ABC transporter, ATP-binding and permease protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PMI0687 macB; macrolide-specific ABC-type efflux carrier K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PMI3705 putative ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D PMI0775 uup; ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D PMI1835 cysP; sulfate/thiosulfate ABC transporter, thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PMI3204 sbp; sulfate-binding protein (sulfate starvation-induced protein) K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PMI1834 cysT; sulfate/thiosulfate ABC transporter, permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D PMI1833 cysW; sulfate/thiosulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D PMI1832 cysA; sulfate/thiosulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PMI0597 modA; molybdate ABC transporter, substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMI1539 ABC transporter, substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMI0598 modB; molybdenum ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D PMI1538 ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D PMI0599 modC; molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PMI1537 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PMI0591 modF; putative molybdenum transport ATP-binding protein (photorepair protein) K05776 modF; molybdate transport system ATP-binding protein
D PMI3071 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMI0190 afuA; putative ferric ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMI3070 ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D PMI0189 afuB; putative ferric ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D PMI0188 afuC; ferric cation import ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMI2322 thiB; thiamine ABC transporter, substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D PMI2323 thiP; thiamine ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D PMI2324 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PMI2734 potD; spermidine/putrescine ABC transporter, substrate-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PMI2735 potC; spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D PMI2736 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D PMI2737 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PMI0410 proX; putative glycine betaine/L-proline ABC transporter, substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PMI0411 proW; glycine betaine/L-proline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PMI0412 proV; glycine betaine/L-proline ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PMI0090 rbsB; D-ribose ABC transporter, substrate-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D PMI0091 rbsC; ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D PMI0092 rbsA; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMI3617 ugpB; glycerol-3-phosphate ABC transporter, substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PMI3616 ugpA; sn-glycerol-3-phosphate ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PMI3615 ugpE; sn-glycerol-3-phosphate ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PMI3614 ugpC; sn-glycerol-3-phosphate ABC transporter, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PMI1175 putative membrane protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D PMI1176 ABC transporter, ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D PMI3657 putative exported protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PMI3656 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PMI3655 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PMI3658 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PMI3659 putative anti-sigma factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D PMI2967 LacI-family transcriptional regulator K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PMI2893 pstS; phosphate ABC transporter, substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PMI2894 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D PMI2895 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D PMI2896 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PMI0681 artI; arginine ABC transporter, substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D PMI0679 artM; arginine ABC transporter, permease protein K09998 artM; arginine transport system permease protein
D PMI0680 artQ; arginine ABC transporter, permease protein K09999 artQ; arginine transport system permease protein
D PMI0682 artP; arginine ABC transporter, ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D PMI0437 gltI; glutamate/aspartate ABC transporter, substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PMI0435 gltK; glutamate/aspartate ABC transporter, permease protein K10002 gltK; glutamate/aspartate transport system permease protein
D PMI0436 gltJ; glutamate/aspartate ABC transporter, permease protein K10003 gltJ; glutamate/aspartate transport system permease protein
D PMI0434 gltL; glutamate/aspartate ABC transporter, ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PMI1318 nlpA; lipoprotein-28 K02073 metQ; D-methionine transport system substrate-binding protein
D PMI2261 metQ; D-methionine ABC transporter, substrate-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PMI3020 probable lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PMI1247 metQ; probable D-methionine-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PMI2260 metI; D-methionine ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D PMI2259 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PMI2898 putative amino acid ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PMI2899 putative amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMI2900 putative amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMI1475 oppA; oligopeptide ABC transporter, oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1367 mppA; periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1476 oppA2; oligopeptide ABC transporter, oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMI1474 oppB; oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D PMI1473 oppC; oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D PMI1472 oppD; oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PMI1471 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PMI2847 dppA; dipeptide ABC transporter, substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMI2846 dppB; dipeptide ABC transporter, permease protein K12369 dppB; dipeptide transport system permease protein
D PMI2845 dppC; dipeptide ABC transporter, permease protein K12370 dppC; dipeptide transport system permease protein
D PMI2844 dppD; dipeptide ABC transporter, ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D PMI2843 dppF; dipeptide ABC transporter, ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D PMI1378 sapA; peptide transport periplasmic protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PMI1379 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D PMI1380 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D PMI1381 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D PMI1382 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D PMI2947 ABC transporter. substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D PMI2946 ABC-transporter, permease protein K15585 nikB; nickel transport system permease protein
D PMI2945 ABC transporter, permease protein K15586 nikC; nickel transport system permease protein
D PMI2944 ABC transporter, ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D PMI2943 ABC transporter, ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D PMI2516 yntA; putative nickel/di-oligopepetide ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMI1480 ABC transporter, substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMI2515 yntB; putative nickel/di-oligopepetide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMI1481 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMI2514 yntC; putative nickel/di-oligopepetide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMI1482 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMI2513 yntD; putative nickel/di-oligopepetide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMI1483 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMI2512 yntE; putative nickel/di-oligopepetide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PMI1484 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PMI1428 hmuT; hemin-binding periplasmic protein K25132 hmuT; heme transport system substrate-binding protein
D PMI1429 hmuU; hemin transport system permease protein HmuU K25133 hmuU; heme transport system permease protein
D PMI1430 hmuV; hemin transport system ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D PMI0331 putative ABC transporter, substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D PMI2957 putative iron ABC transporter, substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D PMI2959 putative iron ABC transporter permease component K25283 yclO; iron-siderophore transport system permease protein
D PMI2958 putative iron ABC transporter, permease component K25284 yclN; iron-siderophore transport system permease protein
D PMI2960 putative iron ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D PMI0238 putative substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PMI2675 putative iron compound ABC transporter, substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PMI0229 ABC transporter, permease protein (FecCD transport family) K02015 ABC.FEV.P; iron complex transport system permease protein
D PMI2676 putative iron compound ABC transporter, permease K02015 ABC.FEV.P; iron complex transport system permease protein
D PMI0230 ABC transporter, ATP-binding subunit K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PMI2677 putative iron compound ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PMI0213 putative periplasmic binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D PMI1041 btuC; vitamin B12 import system permease protein K06073 btuC; vitamin B12 transport system permease protein
D PMI1042 btuD; putative vitamin B12 transport ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D PMI1152 znuA; high-affinity zinc uptake system substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D PMI1150 znuB; high-affinity zinc uptake system membrane protein K09816 znuB; zinc transport system permease protein
D PMI1151 znuC; high-affinity zinc uptake system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PMI1027 sitA; iron ABC transporter, periplasmic substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D PMI1025 sitC; iron ABC transporter, membrane protein K11605 sitC; manganese/iron transport system permease protein
D PMI1024 sitD; iron ABC transporter, membrane protein K11606 sitD; manganese/iron transport system permease protein
D PMI1026 sitB; iron ABC transporter, ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D PMI3465 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D PMI3466 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D PMI3649 putative ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PMI0615 ABC transporter, permease protein K25180 ybhR; drug efflux transport system permease protein
D PMI0616 ABC transporter, permease protein K25181 ybhS; drug efflux transport system permease protein
D PMI0617 ABC transporter, ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D PMI0618 HlyD-family secretion protein K25183 ybhG; membrane fusion protein YbhG
D PMI0878 lolC; lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PMI0880 lolE; lipoprotein-releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PMI0879 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PMI3607 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D PMI3606 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PMI0163 ABC transporter, membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PMI3433 probable transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PMI1225 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PMI3434 probable transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PMI0162 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PMI2165 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PMI2903 putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PMI2166 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PMI1414 sufC; probable ATP-binding component of cysteine desulfurase (putative ATP-dependent transporter) K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PMI1301 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PMI0222 Sodium:sulfate symporter-family protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PMI1404 mdtK; multidrug resistance protein K26939 norM; MATE family, multidrug efflux pump
D PMI0149 putative drug/sodium antiporter K26937 dinF; MATE family, multidrug efflux pump
D PMI0850 MFS-family transporter K02532 lacY; MFS transporter, OHS family, lactose permease
D PMI1570 xapB; xanthosine permease (MFS-family transporter) K11537 xapB; MFS transporter, NHS family, xanthosine permease
D PMI3230 proP; proline/betaine transporter (MFS-family transporter) K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PMI1581 MFS-family transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PMI3619 cynX; putative cyanate transport protein (MFS-family transporter) K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PMI1866 hcaT; probable 3-phenylpropionic acid transporter (MFS-family transporter) K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D PMI3591 glpT; glycerol-3-phosphate transporter (MFS-family transporter) K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D PMI2408 MFS-family transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PMI0191 MFS-family transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PMI3570 narK; nitrite extrusion protein (MFS-family transporter) K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PMI0373 MFS-family transporter K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D PMI0111 ampG; Beta-lactamase induction signal transducer (MFS-family transporter) K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PMI2399 tetAJ; tetracycline resistance protein (MFS-family transporter) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PMI0829 bcr; bicyclomycin resistance protein (sulfonamide resistance protein) (MFS-family transporter) K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PMI3209 emrD; multidrug resistance protein D (MFS-family transporter) K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D PMI1515 sotB; sugar efflux transporter (MFS-family transporter) K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D PMI1687 mdtG; multidrug resistance protein (MFS-family transporter) K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PMI0237 MFS-family transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PMI0405 MFS-family transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PMI1099 mdtH; multidrug resistance protein (MFS-family transporter) K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D PMI1261 MFS-family transporter K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein
D PMI0402 emrB; MFS-family transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PMI3084 putative multidrug efflux protein (MFS-family transporter) K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PMI2962 putative multidrug efflux protein (MFS-family transporter) K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D PMI1294 MFS-family transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D PMI3428 MFS-family transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D PMI1943 MFS-family transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D PMI2597 MFS-family transporter K05373 ybtX; MFS transporter, putative signal transducer
D PMI2649 MFS-family transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D PMI0164 MFS-family transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D PMI1829 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PMI2320 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PMI1828 hpr; PTS system phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D PMI3644 ptsO; phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D PMI1830 crr; PTS family enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMI2292 ptsG; glucose-specific PTS system, EIIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PMI0455 nagE; N-acetylglucosamine-specific PTS system, EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PMI2982 PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D PMI3515 PTS system EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PMI2226 PTS system, IIabc component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PMI0291 treB; trehalose-specific PTS system, EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D PMI2954 chbA; N,N'-diacetylchitobiose-specific PTS system, EIIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PMI2956 chbB; N,N'-diacetylchitobiose-specific PTS system, EIIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PMI2955 chbC; N,N'-diacetylchitobiose-specific PTS system, EIIC component K02761 celB; cellobiose PTS system EIIC component
D PMI2135 agaF; putative N-acetylgalactosamine-specific PTS system, EIIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PMI2138 agaV; putative N-acetylgalactosamine-specific PTS system, EIIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D PMI2137 agaW; putative N-acetylgalactosamine-specific PTS system, EIIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D PMI2136 agaD; putative N-acetylgalactosamine-specific PTS system, EIID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D PMI1777 PTS system EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PMI1776 PTS system EIIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D PMI1775 putative PTS system EIIC component K03475 ulaA; ascorbate PTS system EIIC component
D PMI3646 ptsN; nitrogen regulatory protein [includes: PTS system EIIA component] K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PMI2404 dhaM; PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit [includes: phosphocarrier protein Hpr and phosphotransferase enzyme IIa component] K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D PMI3211 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D PMI2117 putative potassium channel protein K10716 kch; voltage-gated potassium channel
D PMI0127 amtB; probable ammonium transporter K03320 amt; ammonium transporter, Amt family
D PMI1384 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMI0668 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMI3671 sspA; putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D PMI0706 focA; probable formate transporter K06212 focA; formate transporter
D PMI3284 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PMI0135 kefA; putative potassium efflux protein K05802 mscK; potassium-dependent mechanosensitive channel
D PMI3354 putative mechanosensitive ion channel K22051 mscM; miniconductance mechanosensitive channel
D PMI2038 putative mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel
D PMI2164 putative mechanosensitive ion channel protein K16052 ynaI; MscS family membrane protein
D PMI1704 putative mechanosensitive ion channel protein K16053 ybdG; miniconductance mechanosensitive channel
D PMI1572 putative mechanosensitive ion channel membrane protein K16053 ybdG; miniconductance mechanosensitive channel
D PMI2109 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D PMI1580 putative magnesium transporter K06213 mgtE; magnesium transporter
D PMI1670 motA; chemotaxis protein (motility protein A) K02556 motA; chemotaxis protein MotA
D PMI1669 motB; chemotaxis protein (motility protein B) K02557 motB; chemotaxis protein MotB
D PMI0029 exbB; biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D PMI0030 exbD; biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D PMI0581 tolQ; biopolymer transport protein K03562 tolQ; biopolymer transport protein TolQ
D PMI0582 tolR; biopolymer transport protein K03560 tolR; biopolymer transport protein TolR
D PMI1364 putative transport protein K16074 zntB; zinc transporter
D PMI0419 crcB; putative membrane protein (protein CrcB) K06199 crcB; fluoride exporter
D PMI2374 putative membrane protein K08994 yneE; ion channel-forming bestrophin family protein
D PMI3388 putative transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMI0380 putative transporter of ion substrates K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMI0765 ompF; outer membrane porin K09476 ompF; outer membrane pore protein F
D PMI0044 putative outer membrane protein K09476 ompF; outer membrane pore protein F
D PMI0785 ompA; outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PMI1359 outer membrane protein (putative attachment invasion locus protein) K16078 ail; attachment invasion locus protein
D PMI1810 fadL; long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D PMI0534 fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI2212 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI3437 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI3349 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI2730 atfC; outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI2533 outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI1062 Fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI1186 outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI1195 outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI2341 autotransporter (serine protease) K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D PMI0844 autotransporter K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D PMI3246 btuB; vitamin B12 transporter (TonB-dependent receptor) K16092 btuB; vitamin B12 transporter
D PMI2596 putative siderophore TonB-dependent receptor K15721 fyuA; pesticin/yersiniabactin receptor
D PMI1945 ireA; putative TonB-dependent ferric siderophore receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PMI0842 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PMI3120 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMI1548 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMI0409 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMI1426 hmuR2; hemin receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMI1425 hmuR1; hemin receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMI0233 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMI0363 TonB-dependent ferric siderephore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMI2619 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMI2680 prrA; TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMI2618 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMI0276 zapD; type I secretion outer membrane protein K12538 hasF; outer membrane protein, type I secretion system
D PMI2349 tolC; outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PMI1266 channel-forming component of a multidrug resistance efflux pump K12340 tolC; outer membrane protein
D PMI2277 yaeT; outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D PMI1842 putative lipoprotein K17713 bamB; outer membrane protein assembly factor BamB
D PMI1563 nlpB; lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D PMI0392 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D PMI1903 smpA; putative lipoprotein K06186 bamE; outer membrane protein assembly factor BamE
D PMI3390 putative cell surface protein K07278 tamA; translocation and assembly module TamA
D PMI3391 putative exported protein K09800 tamB; translocation and assembly module TamB
D PMI2575 putative adhesin K21449 ata; trimeric autotransporter adhesin
D PMI3650 putative organic solvent tolerance protein K09774 lptA; lipopolysaccharide export system protein LptA
D PMI3651 putative exported protein K11719 lptC; lipopolysaccharide export system protein LptC
D PMI2331 imp; organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D PMI0432 rlpB; rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D PMI3099 putative cellulose biosynthesis protein C K20543 bcsC; cellulose synthase operon protein C
D PMI2101 bcsC; cellulose synthase protein K20543 bcsC; cellulose synthase operon protein C
D PMI2683 putative cell invasion protein K13285 sipB; invasin B
D PMI2681 putative cell invasion protein K13287 sipD; invasin D
D PMI0444 corC; putative magnesium and cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein
D PMI0645 putative membrane protein K06518 cidA; holin-like protein
D PMI0841 lysP; lysine-specific permease K11733 lysP; lysine-specific permease
D PMI1596 pheP; phenylalanine-specific permease K11734 aroP; aromatic amino acid transport protein AroP
D PMI1614 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D PMI2253 proY; proline-specific permease K16234 hutT; histidine transporter
D PMI0306 potE; putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter
D PMI1198 ydgI; putative arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D PMI1406 gadC; probable glutamate/gamma-aminobutyrate antiporter (extreme acid sensitivity protein) K20265 gadC; glutamate:GABA antiporter
D PMI3521 putative cation efflux protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PMI2706 putative membrane protein K18305 mexG; transmembrane protein
D PMI2708 putative multidrug efflux protein K18307 mexI; multidrug efflux pump
D PMI0131 acrB; inner membrane rnd family protein acrb K18138 acrB; multidrug efflux pump
D PMI1586 mdtB; multidrug resistance protein K07788 mdtB; multidrug efflux pump
D PMI1587 mdtC; multidrug resistance protein K07789 mdtC; multidrug efflux pump
D PMI1514 emrE; methyl viologen resistance protein (ethidium resistance protein) K03297 emrE; small multidrug resistance pump
D PMI2710 putative multidrug resistance protein K03297 emrE; small multidrug resistance pump
D PMI2711 putative quaternary ammonium compound resistance protein K03297 emrE; small multidrug resistance pump
D PMI3584 sugE; quaternary ammonium compound-resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PMI1159 mdtI; multidrug resistance protein K11742 mdtI; spermidine export protein MdtI
D PMI1158 mdtJ; multidrug resistance protein K11743 mdtJ; spermidine export protein MdtJ
D PMI2231 putative transport protein K03298 TC.DME; drug/metabolite transporter, DME family
D PMI0632 putative membrane protein K11939 rhtA; inner membrane transporter RhtA
D PMI3342 rarD; putative chloramphenicol-sensitive protein K05786 rarD; chloramphenicol-sensitive protein RarD
D PMI2188 putative membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D PMI1526 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PMI1048 putative membrane protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D PMI0186 dsdX; DsdX permease K13629 dsdX; D-serine transporter
D PMI2672 gntU; low-affinity gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter
D PMI2547 dcuA; anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D PMI0389 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PMI1935 L-lactate permease K03303 lutP; lactate permease
D PMI0249 betU; putative secondary glycine betaine transporter K02168 betT; choline/glycine/proline betaine transport protein
D PMI1462 betT; high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein
D PMI2654 caiT; L-carnitine/gamma-butyrobetaine antiporter K05245 caiT; L-carnitine/gamma-butyrobetaine antiporter
D PMI3654 putative sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter
D PMI3011 pitA; low-affinity inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter
D PMI3625 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D PMI1615 putP; sodium/proline symporter (proline permease) K11928 putP; sodium/proline symporter
D PMI3039 actP; cation/acetate symporter K14393 actP; cation/acetate symporter
D PMI3701 putative sodium:dicarboxylate symporter K07862 sstT; serine/threonine transporter
D PMI2867 gltS; sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family
D PMI0011 nhaA; Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D PMI1511 nhaB; Na+/H+ antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D PMI1274 putative Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D PMI3526 putative Na(+)/H(+) exchanger K24163 nhaK; monovalent cation/hydrogen antiporter
D PMI2805 kefB; glutathione-regulated potassium-efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D PMI2806 kefG; glutathione-regulated potassium-efflux system ancillary protein K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D PMI2180 rosB; putative potassium antiporter K26735 KEA4_5_6; K+:H+ antiporter
D PMI3553 trkH; Trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D PMI3285 trkA; trk system potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D PMI1458 codB; cytosine permease K10974 codB; cytosine permease
D PMI1573 uraA; uracil permease K02824 uraA; uracil permease
D PMI2868 putative permease K16345 xanP; xanthine permease XanP
D PMI3524 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PMI2915 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PMI1822 nupC; nucleoside permease K11535 nupC; nucleoside transport protein
D PMI1738 tyrP; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D PMI0836 mtr; putative tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein
D PMI0672 sdaC; serine transporter K03837 sdaC; serine transporter
D PMI2745 putative membrane protein K26604 cyuP; cysteine uptake transport protein
D PMI2115 clcA; H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D PMI1093 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PMI2499 putative Na+/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D PMI2152 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D PMI0625 dcuD; C4-dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PMI0652 dcuC; anaerobic C4-dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PMI0146 Putative C4-dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PMI3675 putative C4-dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PMI3324 wzxE; O-antigen translocase (flippase) K16693 wzxE; enterobacterial common antigen flippase
D PMI1101 mviN; putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D PMI1218 putative efflux protein K13936 mdcF; malonate transporter and related proteins
D PMI1932 putative transporter K13936 mdcF; malonate transporter and related proteins
D PMI2037 argO; arginine exporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PMI1362 putative transport protein K11250 leuE; leucine efflux protein
D PMI1237 putative transport protein K11250 leuE; leucine efflux protein
D PMI1699 putative branched-chain amino acid transporter K26605 azlC; branched chain amino acid efflux pump
D PMI1698 putative membrane protein K26606 azlD; branched chain amino acid efflux pump
D PMI2935 putative membrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D PMI1230 putative membrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D PMI2936 putative membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D PMI1229 putative membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D PMI2937 putative exported protein K07795 tctC; putative tricarboxylic transport membrane protein
D PMI1265 putative multidrug resistance protein K15547 mdtO; multidrug resistance protein MdtO
D PMI1567 perM; putative membrane protein K03548 perM; putative permease
D PMI3596 putative membrane protein K09125 yhhQ; queuosine precursor transporter
D PMI1029 marC; multiple antibiotic resistance protein K05595 marC; multiple antibiotic resistance protein
D PMI2071 ftsW; cell division protein K03588 ftsW; cell division protein FtsW
D PMI1608 putative membrane protein K23242 mntP; manganese efflux pump family protein
D PMI0174 putative membrane protein K07243 FTR; high-affinity iron transporter
D PMI0173 putative exported protein K07224 efeO; iron uptake system component EfeO
D PMI0172 putative Dyp-type peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D PMI0176 putative exported protein K07230 p19; periplasmic iron binding protein
D PMI1518 putative high-affinity nickel-transport protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D PMI0142 cstA; carbon starvation protein K23676 btsT; pyruvate/proton symporter
D PMI3121 TonB-like protein K03832 tonB; periplasmic protein TonB
D PMI1550 TonB-like protein K03832 tonB; periplasmic protein TonB
D PMI3709 TonB-like protein K03832 tonB; periplasmic protein TonB
D PMI1355 tonB; TonB protein K03832 tonB; periplasmic protein TonB
D PMI2394 TonB-like protein K03832 tonB; periplasmic protein TonB
D PMI0585 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D PMI0583 tolA; TolA protein K03646 tolA; colicin import membrane protein
D PMI0584 tolB; TolB protein K03641 tolB; TolB protein
D PMI0439 putative metal resistance protein K08344 scsB; suppressor for copper-sensitivity B
D PMI3571 narG; respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PMI3572 narH; respiratory nitrate reductase 1 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PMI3574 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PMI1705 dmsA; dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D PMI1706 dmsB; anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D PMI1707 dmsC; anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D PMI1814 phsA; thiosulfate reductase precursor K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D PMI0066 putative oxidoreductase, cytochrome b subunit K08354 phsC; thiosulfate reductase cytochrome b subunit
D PMI1816 phsC; thiosulfate reductase cytochrome b subunit K08354 phsC; thiosulfate reductase cytochrome b subunit
D PMI1681 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D PMI1683 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D PMI1682 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D PMI0403 emrA; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D PMI3083 putative multidrug efflux protein K03543 emrA; membrane fusion protein, multidrug efflux system
D PMI1264 putative HlyD-family secretion protein (putative multidrug resistance protein) K15549 mdtN; membrane fusion protein, multidrug efflux system
D PMI0277 zapC; type I secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D PMI2029 putative HlyD-family toxin secretion protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D PMI2707 putative multidrug efflux protein K18306 mexH; membrane fusion protein, multidrug efflux system
D PMI0132 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PMI3598 multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D PMI0596 putative membrane protein K25859 acrZ; accessory protein, multidrug efflux pump
D PMI1585 mdtA; multidrug resistance protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D PMI0686 macA; macrolide-specific efflux protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D PMI0588 pnuC; putative nicotinamide mononucleotide transport protein K03811 pnuC; nicotinamide mononucleotide transporter
D PMI2920 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D PMI2921 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PMI2922 conserved hypothetical protein K07490 feoC; ferrous iron transport protein C
D PMI3010 uspB; universal stress protein B K06144 uspB; universal stress protein B
D PMI1674 mgtC; Mg(2+) transport ATPase protein C K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PMI2970 putative membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PMI1009 putative copper resistance protein K07245 pcoD; copper resistance protein D
D PMI1008 putative copper resistance protein K07156 copC; copper resistance protein C
D PMI1506 mipA; MltA-interacting protein precursor K07274 mipA; MipA family protein
C 02044 Secretion system [BR:pmr02044]
D PMI2349 tolC; outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PMI1266 channel-forming component of a multidrug resistance efflux pump K12340 tolC; outer membrane protein
D PMI2028 putative toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D PMI2030 putative toxin transporter K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D PMI2029 putative HlyD-family toxin secretion protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D PMI0278 zapB; Type I secretion ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PMI0277 zapC; type I secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D PMI0276 zapD; type I secretion outer membrane protein K12538 hasF; outer membrane protein, type I secretion system
D PMI0342 putative type IV prepilin-like leader peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D PMI1847 putative lipoprotein K02656 pilF; type IV pilus assembly protein PilF
D PMI0337 putative type II/IV secretion system protein K02669 pilT; twitching motility protein PilT
D PMI2315 ppdA; prepilin peptidase dependent protein A precursor K02679 ppdA; prepilin peptidase dependent protein A
D PMI2314 ppdB; putative prepilin peptidase dependent protein B precursor K02680 ppdB; prepilin peptidase dependent protein B
D PMI2049 ppdD; prelipin peptidase dependent protein D K02682 ppdD; prepilin peptidase dependent protein D
D PMI2050 hofB; protein transport protein K02504 hofB; protein transport protein HofB
D PMI2051 hofC; protein transport protein K02505 hofC; protein transport protein HofC
D PMI3022 conserved hypothetical protein K12288 hofM; pilus assembly protein HofM
D PMI3023 putative fimbrial assembly protein K12289 hofN; pilus assembly protein HofN
D PMI3025 putative exported protein K02507 hofQ; protein transport protein HofQ
D PMI0334 putative membrane protein K02221 yggT; YggT family protein
D PMI0120 putative competence protein K02237 comEA; competence protein ComEA
D PMI0717 putative membrane protein K02238 comEC; competence protein ComEC
D PMI2699 putative type III secretion system protein K03221 yscF; type III secretion protein F
D PMI2689 type III secretion system protein K03225 yscQ; type III secretion protein Q
D PMI2694 type III secretion system protein K03230 yscV; type III secretion protein V
D PMI2696 type III secretion system protein K22504 invG; type III secretion system outer membrane ring protein
D PMI2701 type III secretion system protein K22505 prgK; type III secretion system inner membrane ring protein
D PMI2692 type III secretion system protein K22506 spaL; type III secretion system ATPase [EC:7.4.2.8]
D PMI2688 type III secretion system protein K22507 spaP; type III secretion system export apparatus protein
D PMI2687 putative type III secretion system protein K22508 spaQ; type III secretion system export apparatus protein
D PMI2686 putative type III secretion system protein K22509 spaR; type III secretion system export apparatus protein
D PMI2685 putative type III secretion system protein K22510 spaS; type III secretion system export apparatus switch protein
D PMI2695 type III secretion system protein K22511 invE; type III secretion system protein
D PMI2693 type III secretion system protein K22512 spaK; type III secretion system chaperone
D PMI2700 type III secretion system protein K22487 prgJ; type III secretion system protein
D PMI1659 flhA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D PMI1660 flhB; flagellar biosynthetic protein K02401 flhB; flagellar biosynthesis protein FlhB
D PMI1630 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D PMI1632 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D PMI1633 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PMI1638 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PMI1639 fliO; flagellar protein K02418 fliO; flagellar protein FliO/FliZ
D PMI1640 fliP; flagellar biosynthetic protein K02419 fliP; flagellar biosynthesis protein FliP
D PMI1641 fliQ; flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ
D PMI1642 fliR; flagellar biosynthetic protein K02421 fliR; flagellar biosynthesis protein FliR
D PMIP07 pilX1; putative transglycosylase K03194 virB1; type IV secretion system protein VirB1
D PMIP09 pilX4; putative conjugal transfer protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D PMIP10 pilX5; putative conjugal transfer protein K03200 virB5; type IV secretion system protein VirB5
D PMIP12 pilX6; putative conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D PMIP13 pilX8; conjugal transfer protein K03203 virB8; type IV secretion system protein VirB8
D PMIP14 pilX9; conjugal transfer protein K03204 virB9; type IV secretion system protein VirB9
D PMIP15 pilX10; conjugal transfer protein K03195 virB10; type IV secretion system protein VirB10
D PMIP16 pilX11; conjugal transfer protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D PMIP17 taxB; conjugal transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PMI2642 chromosome partitioning related protein K12055 K12055; chromosome partitioning related protein ParA
D PMI2431 putative pilus assembly protein K12056 traG; conjugal transfer mating pair stabilization protein TraG
D PMI2433 putative pilus assembly K12057 traF; conjugal transfer pilus assembly protein TraF
D PMI2456 putative mating pair stabilization protein K12058 traN; conjugal transfer mating pair stabilization protein TraN
D PMI2457 putative plasmid pilus assembly K12060 traU; conjugal transfer pilus assembly protein TraU
D PMI2458 putative plasmid pilus assembly protein K12061 traW; conjugal transfer pilus assembly protein TraW
D PMI2459 putative plasmid conjugation signal peptidase K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D PMI2461 putative plasmid pilus assembly protein K12063 traC; conjugal transfer ATP-binding protein TraC
D PMI2466 putative plasmid-related protein K12064 traV; conjugal transfer pilus assembly protein TraV
D PMI2467 putative plasmid pilus assembly protein K12065 traB; conjugal transfer pilus assembly protein TraB
D PMI2468 putative plasmid-related protein K12066 traK; conjugal transfer pilus assembly protein TraK
D PMI2469 putative plasmid pilus assembly protein K12067 traE; conjugal transfer pilus assembly protein TraE
D PMI2470 putative plasmid pilus assembly protein K12068 traL; conjugal transfer pilus assembly protein TraL
D PMI2465 putative plasmid-related protein K12069 traA; conjugal transfer pilus assembly protein TraA
D PMI2476 putative plasmid conjugative relaxase K12070 traI; conjugal transfer pilus assembly protein TraI
D PMI2475 putative plasmid conjugative transfer protein K12071 traD; conjugal transfer pilus assembly protein TraD
D PMI2588 putative plasmid transfer protein K12071 traD; conjugal transfer pilus assembly protein TraD
D PMI2011 dsbC; thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PMI2462 putative plasmid-related disulfide bond isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PMI2432 putative pilus assembly protein K12072 traH; conjugative transfer pilus assembly protein TraH
D PMI2341 autotransporter (serine protease) K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D PMI0844 autotransporter K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D PMI2056 hpmB; hemolysin activator protein (putative two-partner secretion system accessory protein) K11017 shlB; hemolysin activation/secretion protein
D PMI2057 hpmA; hemolysin K11016 shlA; hemolysin
D PMI0736 putative membrane protein K11891 impL; type VI secretion system protein ImpL
D PMI0741 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK
D PMI0742 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D PMI0745 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D PMI0734 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D PMI0746 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D PMI0748 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D PMI0749 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D PMI1117 hcp; conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PMI2990 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PMI0207 hcp; conserved hypothetical protein (putative hemolysin co-regulated protein) K11903 hcp; type VI secretion system secreted protein Hcp
D PMI0750 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PMI1118 Rhs-family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PMI2991 VgrG-like protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PMI0208 VgrG-like protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PMI1331 VgrG-like protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PMI0751 putative RHS accessory genetic element (VgrG-like protein) K11904 vgrG; type VI secretion system secreted protein VgrG
D PMI0747 conserved hypothetical protein K11905 K11905; type VI secretion system protein
D PMI0743 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D PMI0740 probable ATPase K11907 vasG; type VI secretion system protein VasG
D PMI0737 conserved hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D PMI0735 conserved hypothetical protein K11911 vasL; type VI secretion system protein VasL
D PMI0744 putative phosphopeptide-binding protein K11894 impI; type VI secretion system protein ImpI
D PMI0738 conserved hypothetical protein K11909 vasI; type VI secretion system protein VasI
D PMI0536 uca; putative major fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI1469 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI2214 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI3435 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI2728 atfA; major subunit of type 1 fimbria K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI3348 fimbrial adhesin K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI3352 frimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI1877 pmfA; major fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI1188 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI1197 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI1467 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D PMI3436 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI2534 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI2729 atfB; type 1 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D PMI3350 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI1063 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI0534 fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI2212 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI3437 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI3349 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI2730 atfC; outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI2533 outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI1062 Fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI1186 outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI1195 outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI3438 fimbrial subunit K07348 fimF; minor fimbrial subunit
D PMI2731 fimbrial subunit K07348 fimF; minor fimbrial subunit
D PMI3439 fimbrial subunit K07349 fimG; minor fimbrial subunit
D PMI2211 putative fimbrial subunit K07349 fimG; minor fimbrial subunit
D PMI2210 putative fimbrial subunit K07349 fimG; minor fimbrial subunit
D PMI3440 fimbrial adhesin K07350 fimH; minor fimbrial subunit
D PMI1465 putative fimbrial adhesin K07350 fimH; minor fimbrial subunit
D PMI2223 pmpA; fimbrial subunit K12517 papA; major pilin subunit PapA
D PMI2221 fimbrial outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D PMI0265 mrpC; fimbrial outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D PMI0255 fimbrial outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D PMI0299 fimbrial outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D PMI1878 pmfC; outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D PMI2220 fimbrial chaperone protein K12519 papD; chaperone protein PapD
D PMI0300 fimbrial chaperone protein K12519 papD; chaperone protein PapD
D PMI0266 mrpD; fimbrial chaperone protein K12519 papD; chaperone protein PapD
D PMI1879 pmfD; fimbrial chaperone protein K12519 papD; chaperone protein PapD
D PMI2538 fimbrial chaperone K12519 papD; chaperone protein PapD
D PMI2217 putative fimbrial subunit K12521 papF; minor pilin subunit PapF
D PMI2218 fimbrial subunit K12523 papK; minor pilin subunit PapK
D PMI3002 putative fimbrial protein K21964 ecpA; Mat/Ecp fimbriae major subunit
D PMI3001 putative fimbrial protein K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone
D PMI2998 putative fimbrial protein K21967 ecpD; Mat/Ecp fimbriae adhesin
D PMI2997 putative fimbrial protein K21968 ecpE; Mat/Ecp fimbriae periplasmic chaperone
D PMI2061 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMI3183 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D PMI0078 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PMI2791 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D PMI0079 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D PMI3415 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D PMI2062 secM; secretion monitor protein K13301 secM; secretion monitor
D PMI3275 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D PMI0382 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMI3605 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D PMI0077 yajC; putative preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PMI3128 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMI3539 tatA; sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D PMI3540 tatB; Sec-independent protein translocase K03117 tatB; sec-independent protein translocase protein TatB
D PMI3541 tatC; sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pmr02042]
D PMI2043 putative toxin K10953 rtxA; RTX toxin RtxA
D PMI3388 putative transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMI0380 putative transporter of ion substrates K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMI2057 hpmA; hemolysin K11016 shlA; hemolysin
D PMI2056 hpmB; hemolysin activator protein (putative two-partner secretion system accessory protein) K11017 shlB; hemolysin activation/secretion protein
C 02022 Two-component system [BR:pmr02022]
D PMI0052 phoR; phosphate regulon sensor protein (two-component histidine kinase) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMI0051 phoB; phosphate regulon transcriptional regulator (two-component response regulator) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PMI0884 phoQ; two-component sensor kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PMI0885 phoP; two-component response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PMI2892 envZ; osmolarity sensor protein (two-component system sensor kinase) K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PMI2891 ompR; osmolarity transcriptional regulator (two-component system response regulator) K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PMI3198 cpxA; two-component system sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMI3199 cpxR; two component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PMI1588 baeS; two-component system sensor kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D PMI1589 baeR; two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D PMI1227 kdpD; two-component sensor kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PMI1226 kdpE; two-component response regulator of kdp operon K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PMI3678 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PMI3719 arcA; aerobic respiration control protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D PMI1697 rssA; swarming motility regulation two-component system, sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PMI3569 narX; nitrate/nitrite teo-component system, sensor kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D PMI3568 narL; nitrate/nitrite two-component system, response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PMI1553 narP; nitrate/nitrite response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D PMI0192 two-component sensor kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D PMI0193 two-component response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D PMI1731 rcsC; two component system, [includes both sensor kinase and response regulator domains] (capsular synthesis regulator component C) K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D PMI1729 rsbA; swarming behavior regulation two-component system, sensor kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D PMI1730 rcsB; two component system, response regulator (capsular synthesis regulator component B) K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PMI1522 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PMI3431 two-component system sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D PMI3430 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D PMI2883 ntrB; nitrogen regulation protein NR(II) (two-component system sensor kinase) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PMI2884 glnG; nitrogen regulation protein NR(I) (two-component system response regulator) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PMI1874 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PMI1872 putative two-component system response regulator (sigma-54 interacting regulator) K07715 glrR; two-component system, NtrC family, response regulator GlrR
D PMI2406 pgtB; putative phosphoglycerate transport system sensor kinase K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D PMI2405 pgtA; phosphoglycerate transport system transcriptional regulator K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D PMI1668 cheA; chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PMI1662 cheY; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PMI1663 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PMI1684 ttrS; two component system sensor kinase of tetrathionate reductase complex K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D PMI1685 ttrR; two component system response regulator of tetrathionate reductase complex K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D PMI1491 response regulator K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:pmr02035]
D PMI1668 cheA; chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PMI1667 cheW; chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PMI1664 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PMI1663 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PMI1662 cheY; chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PMI1661 cheZ; chemotaxis phosphatase K03414 cheZ; chemotaxis protein CheZ
D PMI1666 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMI2808 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMI2809 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMI1665 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D PMI2813 aer; aerotaxis receptor K03776 aer; aerotaxis receptor
D PMI1632 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D PMI1633 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PMI1634 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D PMI1639 fliO; flagellar protein K02418 fliO; flagellar protein FliO/FliZ
D PMI1640 fliP; flagellar biosynthetic protein K02419 fliP; flagellar biosynthesis protein FliP
D PMI1641 fliQ; flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ
D PMI1642 fliR; flagellar biosynthetic protein K02421 fliR; flagellar biosynthesis protein FliR
D PMI1659 flhA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D PMI1660 flhB; flagellar biosynthetic protein K02401 flhB; flagellar biosynthesis protein FlhB
D PMI1631 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D PMI1637 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D PMI1638 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PMI1630 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D PMI1647 flgI; flagellar P-ring protein precursor (basal body P-ring protein) K02394 flgI; flagellar P-ring protein FlgI
D PMI1655 flgA; flagella basal body P-ring formation protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PMI1648 flgH; flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D PMI1636 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D PMI1629 fliE; flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D PMI1635 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PMI1654 flgB; flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D PMI1653 flgC; flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D PMI1652 flgD; basal-body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PMI1650 flgF; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D PMI1649 flgG; flagellar basal-body rod protein (distal rod protein) K02392 flgG; flagellar basal-body rod protein FlgG
D PMI1646 flgJ; peptidoglycan hydrolase (muramidase) K02395 flgJ; peptidoglycan hydrolase FlgJ
D PMI1651 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D PMI1645 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D PMI1644 flgL; flagellar hook-associated protein 3 (hook-filament junction protein) K02397 flgL; flagellar hook-associated protein 3 FlgL
D PMI1657 flgN; flagella synthesis protein K02399 flgN; flagellar biosynthesis protein FlgN
D PMI1619 fliC2; flagellin 2 K02406 fliC; flagellin
D PMI1620 fliC1; flagellin 1 K02406 fliC; flagellin
D PMI1621 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D PMI1622 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D PMI1623 fliT; flagella protein K02423 fliT; flagellar protein FliT
D PMI1672 flhD; flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D PMI1671 flhC; flagellar transcriptional activator K02402 flhC; flagellar transcriptional activator FlhC
D PMI1618 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D PMI1670 motA; chemotaxis protein (motility protein A) K02556 motA; chemotaxis protein MotA
D PMI1669 motB; chemotaxis protein (motility protein B) K02557 motB; chemotaxis protein MotB
D PMI1617 fliZ; FliZ protein K02425 fliZ; regulator of sigma S factor FliZ
D PMI1656 flgM; negative regulator of flagellin synthesis (anti-sigma-28 factor) K02398 flgM; negative regulator of flagellin synthesis FlgM
D PMI0337 putative type II/IV secretion system protein K02669 pilT; twitching motility protein PilT
D PMI1847 putative lipoprotein K02656 pilF; type IV pilus assembly protein PilF
D PMI0536 uca; putative major fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI1469 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI2214 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI3435 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI2728 atfA; major subunit of type 1 fimbria K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI3348 fimbrial adhesin K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI3352 frimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI1877 pmfA; major fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI1188 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI1197 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMI1467 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D PMI3436 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI2534 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI2729 atfB; type 1 fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D PMI3350 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI1063 fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D PMI0534 fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI2212 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI3437 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI3349 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI2730 atfC; outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI2533 outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMI1062 Fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI1186 outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI1195 outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D PMI3438 fimbrial subunit K07348 fimF; minor fimbrial subunit
D PMI2731 fimbrial subunit K07348 fimF; minor fimbrial subunit
D PMI3439 fimbrial subunit K07349 fimG; minor fimbrial subunit
D PMI2211 putative fimbrial subunit K07349 fimG; minor fimbrial subunit
D PMI2210 putative fimbrial subunit K07349 fimG; minor fimbrial subunit
D PMI3440 fimbrial adhesin K07350 fimH; minor fimbrial subunit
D PMI1465 putative fimbrial adhesin K07350 fimH; minor fimbrial subunit
D PMI1468 fimbrial subunit K07351 fimI; fimbrial protein
D PMI1881 pmfF; putative minor fimbrial subunit K07351 fimI; fimbrial protein
D PMI1466 fimbrial outer membrane usher protein K07354 sfmD; outer membrane usher protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pmr04812]
D PMI3631 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PMI2488 putative plasmid-related protein K18640 parM; plasmid segregation protein ParM
D PMI2065 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D PMI2066 ftsA; cell division protein K03590 ftsA; cell division protein FtsA
D PMI1170 minC; septum site-determining protein K03610 minC; septum site-determining protein MinC
D PMI1169 minD; septum site-determining protein K03609 minD; septum site-determining protein MinD
D PMI1168 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D PMI0515 EP0005; putative phage replication protein K03496 parA; chromosome partitioning protein
D PMIP34 putative plasmid stability/partitioning protein K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:pmr04147]
D PMI2185 htpG; chaperone protein HtpG (heat shock protein HtpG) K04079 HSP90A; molecular chaperone HtpG
D PMI0221 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMI1504 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMI0242 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PMI2409 putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI1155 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI1405 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMI2823 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PMI0073 ahpC; putative alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PMI2543 groL; 60 Kda chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMI0009 dnaK; chaperone protein DnaK (heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D PMI2754 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMI1546 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PMI2792 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D PMI3251 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D PMI0869 putative nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PMI1301 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PMI2081 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMI1166 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMI2184 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PMI0138 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PMI3240 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMI3239 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMI3397 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMI1949 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PMI3210 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PMI2882 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMI1455 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PMI2500 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PMI2031 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMI2768 purH; bifunctional purine biosynthesis protein [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase] K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMI2044 lpdA; dihydrolipoyl dehydrogenase (glycine cleavage system L protein) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMI2652 fixB; electron transfer flavoprotein alpha subunit for carnitine metabolism K03522 fixB; electron transfer flavoprotein alpha subunit
D PMI1157 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMI3205 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMI0590 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:pmr02048]
D PMI1999 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMI3029 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMI3143 DNA modification methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D PMI0962 phage DNA adenine-methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D PMI0922 phage protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D PMI3141 putative restriction endonuclease K07448 mrr; restriction system protein
D PMIP36 putative endonuclease K07448 mrr; restriction system protein
D PMI0022 putative cell killing protein K18922 hokE; protein HokE
D PMI1146 conserved hypothetical protein K19048 symE; toxic protein SymE
D PMI2871 putative plasmid-related protein K18923 stbD; antitoxin StbD
D PMI3308 putative plasmid stability protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D PMI3125 hipA; putative regulatory protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PMI0054 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PMI3126 hipB; transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D PMI2876 putative plasmid-related protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D PMI1000 putative phage-related protein K18843 hicB; antitoxin HicB
D PMI2108 conserved hypothetical protein K19160 yafO; mRNA interferase YafO [EC:3.1.-.-]
D PMI0129 putative regulatory protein K05839 hha; haemolysin expression modulating protein
D PMI0130 conserved hypothetical protein K19162 tomB; hha toxicity modulator TomB
D PMI1374 pspC; phage shock protein C K03973 pspC; phage shock protein C
D PMI1375 pspB; phage shock protein B K03970 pspB; phage shock protein B
D PMI0551 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D PMIP32 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D PMI3358 putative plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D PMI0550 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D PMI3496 putative phage-related protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PMI2879 vagD; putative plasmid-related protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D PMI2880 vagC; plasmid-related protein K18829 mvpT; antitoxin VapB
D PMI0087 putative plasmid-associated protein K18829 mvpT; antitoxin VapB
D PMI0514 mnt; phage regulatory protein K21495 fitA; antitoxin FitA
D PMI1679 conserved hypothetical protein K12148 bssS; biofilm regulator BssS
D PMI2065 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D PMI3631 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PMI2344 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PMI2345 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PMI1818 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMI2553 conserved hypothetical protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D PMI2014 putative membrane protein K19168 cptA; toxin CptA
D PMI2016 conserved hypothetical protein K09159 cptB; antitoxin CptB
D PMI1860 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:pmr04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:pmr04090]
C 01504 Antimicrobial resistance genes [BR:pmr01504]
D PMI0587 putative aminoglycoside 6-adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D PMI2399 tetAJ; tetracycline resistance protein (MFS-family transporter) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PMI0728 cat; chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D PMI1693 putative acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D PMI2962 putative multidrug efflux protein (MFS-family transporter) K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D PMI0884 phoQ; two-component sensor kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PMI0885 phoP; two-component response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PMI0132 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PMI3598 multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D PMI0131 acrB; inner membrane rnd family protein acrb K18138 acrB; multidrug efflux pump
D PMI2060 MerR-family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PMI2172 cueR; MerR-family transcriptional regulator (copper efflux regulator) K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PMI2349 tolC; outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PMI1266 channel-forming component of a multidrug resistance efflux pump K12340 tolC; outer membrane protein
D PMI0765 ompF; outer membrane porin K09476 ompF; outer membrane pore protein F
D PMI0044 putative outer membrane protein K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:pmr00536]
D PMI0593 putative adhesin K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pmr00537]
D PMI2500 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:pmr03200]
D PMI0921 phage endopeptidase (lysis protein) K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
D PMI1984 putative phage lysis protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
D PMI0492 putative phage endopeptidase K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
D PMI0965 phage endopeptidase (lysis protein) K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
D PMI1723 phage protein (endopeptidase/lysis protein) K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pmr03100]
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-6 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-7 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-4 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-3 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-4 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-6 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-8 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-7 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-5 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-4 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-6 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-7 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-5 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-6 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-2 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-5 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-6 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-5 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Sec tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D 16S_rRNA-2 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16SrRNA-1 16SrRNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-1 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-3 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16SrRNA-2 16SrRNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-4 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-5 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-1 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-2 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-4 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-3 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23SrRNA-2 23SrRNA K01980 23SrRNA; 23S ribosomal RNA
D 23SrRNA-1 23SrRNA K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-5 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 5S_rRNA-1 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-8 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-4 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-5 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-3 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-2 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-7 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5S_rRNA-6 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PMI0024 dkgA; 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PMI0802 dkgB; 2,5-diketo-D-gluconic acid reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D PMI3575 putative oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D PMI3702 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D PMI2655 caiA; crotonobetainyl-CoA dehydrogenase K08297 caiA; crotonobetainyl-CoA dehydrogenase [EC:1.3.8.13]
D PMI2651 fixC; FAD-dependent oxidoreductase subunit for carnitine metabolism K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D PMI2740 qor; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PMI1934 mdaB; putative modulator of drug activity B (putative subunit of NADPH quinone reductase) K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D PMI1191 acpD; acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PMI1214 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D PMI3389 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PMI1503 msrB; peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PMI1780 putative glutathione-S transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PMI1566 bcp; putative peroxiredoxin (bacterioferritin comigratory protein) K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PMI1368 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PMI1213 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D PMI2215 putative peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D PMI1836 conserved hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D PMI3014 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PMI2204 pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PMI3459 pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PMI1868 hmp; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D PMI1007 ftnA; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D PMI0159 cueO; putative copper efflux oxidase K14588 cueO; cuproxidase [EC:1.16.3.4]
D PMI3208 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PMI1569 glutaredoxin-related protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PMI3450 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PMI0704 pflA; pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PMI2715 putative propanediol utilization protein (putative dehydratase activating enzyme) K20037 cutD; choline trimethylamine-lyase activating enzyme [EC:1.97.1.-]
D PMI2111 hcr; NADH oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D PMI2528 hyfA; hydrogenase-4 component A K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D PMI2527 hyfB; hydrogenase-4 component B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D PMI2526 hyfC; hydrogenase-4 component C K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D PMI2525 hyfD; hydrogenase-4 component D K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D PMI2524 hyfE; hydrogenase-4 component E K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D PMI2523 hyfF; hydrogenase-4 component F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D PMI2522 hyfG; hydrogenase-4 component G K12142 hyfG; hydrogenase-4 component G [EC:1.-.-.-]
D PMI2520 hyfI; hydrogenase-4 component I K12144 hyfI; hydrogenase-4 component I [EC:1.-.-.-]
D PMI2519 hyfJ; hydrogenase-4 component J K12145 hyfJ; hydrogenase-4 component J [EC:1.-.-.-]
D PMI2238 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PMI1402 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PMI2116 putative tellurite resistance protein K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D PMI0443 cutE; putative apolipoprotein N-acyltransferase (copper homeostasis protein) K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PMI3444 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D PMI2228 putative acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D PMI3461 putative acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D PMI0692 aat; leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PMI2679 modD; putative pyrophosphorylase K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D PMI0399 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D PMI2319 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PMI0358 apbE; thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PMI1422 Conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PMI2359 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PMI2356 putative reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D PMI2762 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D PMI2656 caiB; crotonobetainyl-coa:carnitine CoA-transferase K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21]
D PMI0580 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PMI1342 trpH; conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PMI1806 sixA; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PMI2143 putative arylsulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D PMI2452 endonuclease precursor K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D PMI1441 endA; endonuclease I precursor K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D PMI2419 putative TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PMI0868 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PMI0546 putative hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D PMI0367 yafA; putative esterase K11750 frsA; esterase FrsA [EC:3.1.-.-]
D PMI3103 celY; putative cellulase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D PMI0491 phage lysozome K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PMI0920 phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PMI2825 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PMI3288 fms; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PMI2951 chbG; conserved hypothetical protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D PMI3637 putative carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D PMI1241 conserved hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D PMI3452 tdcF; putative endoribonuclease K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PMI2360 adenylate cyclase-like protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D PMI0855 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D PMI3050 putative ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PMI0814 conserved hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D PMI2661 fsaA; fructose-6-phosphate aldolase K08314 fsaB; fructose-6-phosphate aldolase 2 [EC:4.1.2.-]
D PMI2658 caiD; carnitinyl-CoA dehydratase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149]
D PMI2127 chondroitin ABC endolyase 1 precursor K08961 K08961; chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21]
D PMI2128 putative chondroitin ABC lyase precursor K08961 K08961; chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21]
D PMI1234 pyridoxal-phosphate dependent K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D PMI2716 putative propanediol utilization protein (putative dehydratase) K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4]
D PMI2302 csdA; cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D PMI2657 caiC; probable crotonobetaine/carnitine-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D PMI3398 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein peptide ligase) K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D PMI1307 rnfD; electron transport complex protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D PMI1306 rnfC; electron transport complex protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D PMI1305 rnfB; electron transport complex protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D PMI0352 nqrA; Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D PMI0353 nqrB; Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D PMI0354 nqrC; Na+-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D PMI0355 nqrD; Na+-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D PMI0356 nqrE; Na+-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D PMI0357 nqrF; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D PMI3600 ppaA; P-type cation-translocating membrane ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D PMI0202 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D PMI1936 putative oxidoreductase subunit K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PMI3046 putative oxidoreductase (cysteine-rich protein) K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PMI1937 putative iron-sulphur protein protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PMI3045 putative iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PMI1938 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D PMI3044 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D PMI3112 fdhD; putative formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D PMI2202 fdrA; protein FdrA (multicopy suppressor of dominant negative ftsH mutants) K02381 fdrA; FdrA protein
D PMI1855 fdx; 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D PMI1736 putative ferredoxin K11107 yfaE; ferredoxin
D PMI1308 rnfG; electron transport complex protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D PMI1309 rnfE; electron transport complex protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D PMI1304 rnfA; electron transport complex protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D PMI3581 hydN; electron transport protein K05796 hydN; electron transport protein HydN
D PMI3054 mioC; flavoprotein involved in biotin synthesis K06205 mioC; MioC protein
D PMI2013 fldB; flavodoxin 2 K03840 fldB; flavodoxin II
D PMI2521 hyfH; hydrogenase-4 component H K12143 hyfH; hydrogenase-4 component H
D PMI1859 iscU; putative iron-binding protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PMI0544 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
D PMI2653 fixA; electron transfer flavoprotein beta subunit for carnitine metabolism K03521 fixA; electron transfer flavoprotein beta subunit
D PMI2650 fixX; ferredoxin subunit for carnitine metabolism K03855 fixX; ferredoxin like protein
D PMI0067 putative oxidoreductase, Fe-S subunit K04014 nrfC; protein NrfC
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D PMI0415 nrdI; NrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D PMI1826 cysZ; putative sulfate transporter K06203 cysZ; CysZ protein
D PMI1360 conserved hypothetical protein K08234 yaeR; glyoxylase I family protein
D PMI0336 putative amino acid racemase K06997 yggS; PLP dependent protein
D PMI1030 putative acetyltransferase K22479 argA; N-acetyltransferase
D PMI0145 conserved hypothetical protein K26607 cyuA; putative L-cysteine desulfidase
C 99986 Glycan metabolism
D PMI1315 putative membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D PMI1314 conserved hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D PMI2100 bcsB; cyclic di-GMP binding protein K20541 bcsB; cellulose synthase operon protein B
D PMI3098 putative cellulose biosynthesis protein B K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D PMI3329 hemY; putative porphyrin biosynthesis protein K02498 hemY; HemY protein
D PMI3538 ubiB; probable ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
D PMI3537 conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D PMI2354 conserved hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D PMI3443 putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D PMI2832 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D PMI0272 mtrF; putative efflux pump component K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D PMI2342 sufI; putative multicopper oxidase (suppressor of ftsI) K04753 sufI; suppressor of ftsI
D PMI1966 chrR; putative chromate reductase (NADPH-dependent FMN reductase) K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PMI3703 putative membrane protein K15977 K15977; putative oxidoreductase
D PMI3696 putative membrane protein K15977 K15977; putative oxidoreductase
D PMI0398 putative acyl-CoA synthetase/acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PMI3640 putative ribonuclease inhibitor K03623 yhcO; ribonuclease inhibitor
D PMI0418 cspE; putative cold shock protein K03704 cspA; cold shock protein
D PMI1676 cspC; cold shock-like protein K03704 cspA; cold shock protein
D PMI0688 cspD; cold shock-like protein K03704 cspA; cold shock protein
D PMI0720 putative cold shock protein K03704 cspA; cold shock protein
D PMI0807 cspB; putative cold shock protein K03704 cspA; cold shock protein
D PMI0972 cold shock protein K03704 cspA; cold shock protein
D PMI0913 cspA; cold shock protein K03704 cspA; cold shock protein
D PMI0126 glnK; nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D PMI2889 tex; putative transcription accessory protein K06959 tex; protein Tex
C 99974 Translation
D PMI1224 putative ABC-type multidrug transport system K13926 rbbA; ribosome-dependent ATPase
C 99975 Protein processing
D PMI0689 clpS; ATP-dependent Clp protease adaptor protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PMI0114 tig; Trigger factor K03545 tig; trigger factor
D PMI3107 fdhE; formate dehydrogenase formation protein K02380 fdhE; FdhE protein
D PMI3686 ureE; urease accessory protein K03187 ureE; urease accessory protein
D PMI3687 ureF; urease accessory protein K03188 ureF; urease accessory protein
D PMI3688 ureG; urease accessory protein K03189 ureG; urease accessory protein
D PMI3682 UreD; urease accessory protein K03190 ureD; urease accessory protein
D PMI1906 smpB; SsrA-binding protein (small protein B) K03664 smpB; SsrA-binding protein
D PMI0038 hybG; hydrogenase-2 maturation protein K04653 hypC; hydrogenase expression/formation protein HypC
D PMI3583 hypC; putative hydrogenase formation protein K04653 hypC; hydrogenase expression/formation protein HypC
D PMI0039 hypD; hydrogenase formation protein K04654 hypD; hydrogenase expression/formation protein HypD
D PMI0040 hypE; hydrogenase formation protein K04655 hypE; hydrogenase expression/formation protein HypE
D PMI1507 hypF; hydrogenase maturation protein K04656 hypF; hydrogenase maturation protein HypF
D PMI0416 nrdH; glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH
D PMI3297 putative magnesium-chelatase K07391 comM; magnesium chelatase family protein
D PMI1096 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein K07394 K07394; SM-20-related protein
D PMI0343 conserved hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D PMI2819 OsmC-like protein K07397 yhfA; putative redox protein
D PMI2926 gntY; putative gluconate metabolism protein (putative iron-sulphur cluster biosynthesis) K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D PMI2298 xni; exodeoxyribonuclease IX K01146 xni; protein Xni
D PMI3507 putative hypothetical protein K07454 K07454; putative restriction endonuclease
D PMI3156 radC; DNA repair protein K03630 radC; DNA repair protein RadC
D PMI2440 putative plasmid-related DNA repair protein K03630 radC; DNA repair protein RadC
D PMI3535 rumC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC
D PMI0685 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D PMI2435 putative plasmid-related protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D PMI3691 conserved hypothetical protein K07460 yraN; putative endonuclease
D PMI3445 conserved hypothetical protein K07461 K07461; putative endonuclease
D PMI3289 smf; conserved hypothetical protein K04096 smf; DNA processing protein
D PMI0262 mrpI; fimbriae recombinase K07357 fimB; type 1 fimbriae regulatory protein FimB
D PMI0699 putative ATPase K07478 ycaJ; putative ATPase
D PMI3290 putative DNA-binding protein K07479 yrdD; putative DNA topoisomerase
D PMI2438 putative plasmid-related protein K06919 K06919; putative DNA primase/helicase
D PMI0322 transposase K07483 K07483; transposase
D PMI2610 insN; transposase for insertion sequence element IS911 K07483 K07483; transposase
D PMI2612 putative transposase K07486 K07486; transposase
D PMI1001 putative IS element transposase K07491 rayT; REP-associated tyrosine transposase
D PMI3711 transposase K07491 rayT; REP-associated tyrosine transposase
D PMI3034 transposase K07491 rayT; REP-associated tyrosine transposase
D PMI3505 putative putative IS element transposase K07491 rayT; REP-associated tyrosine transposase
D PMI3544 transposase K07491 rayT; REP-associated tyrosine transposase
D PMI3073 transposase K07491 rayT; REP-associated tyrosine transposase
D PMI2989 putative transposase K07491 rayT; REP-associated tyrosine transposase
D PMI3043 transposase K07491 rayT; REP-associated tyrosine transposase
D PMI2339 transposase K07491 rayT; REP-associated tyrosine transposase
D PMI2502 putative transposase K07491 rayT; REP-associated tyrosine transposase
D PMI3381 putative transposase K07491 rayT; REP-associated tyrosine transposase
D PMI3306 putative transposase K07491 rayT; REP-associated tyrosine transposase
D PMI2179 putative transposase K07491 rayT; REP-associated tyrosine transposase
D PMI0759 putative transposase K07491 rayT; REP-associated tyrosine transposase
D PMI3382 transposase K07496 K07496; putative transposase
D PMI2338 transposase K07496 K07496; putative transposase
D PMI3543 transposase K07496 K07496; putative transposase
D PMI2988 transposase K07496 K07496; putative transposase
D PMI3033 transposase K07496 K07496; putative transposase
D PMI3074 transposase K07496 K07496; putative transposase
D PMI2501 putative transposase K07496 K07496; putative transposase
D PMI3307 transposase K07496 K07496; putative transposase
D PMI2178 transposase K07496 K07496; putative transposase
D PMI1002 transposase K07496 K07496; putative transposase
D PMI0760 transposase K07496 K07496; putative transposase
D PMI3710 transposase K07496 K07496; putative transposase
D PMI3506 transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D PMI1376 pspA; phage shock protein A K03969 pspA; phage shock protein A
D PMI1373 pspD; phage shock protein D K03971 pspD; phage shock protein D
D PMI0140 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PMI3599 multidrug efflux pump K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D PMI2412 putative Mg(2+)/citrate complex transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D PMI0245 MFS-family transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PMI1584 tppB; tripeptide permease (MFS-family transporter) K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PMI1688 putative di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PMI2976 putative sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PMI1946 sglT; sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PMI2980 putative sodium:solute symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PMI2114 putative sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PMI1601 putative sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PMI0053 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PMI1599 branched chain amino acid transport protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PMI2418 putative Na+ dependent nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D PMI2206 putative sodium:sulfate symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D PMI2851 putative permease K07085 K07085; putative transport protein
C 99978 Cell growth
D PMI1353 ispZ; probable intracellular septation protein K06190 ispZ; intracellular septation protein
D PMI3180 putative exported peptidase K22719 envC; murein hydrolase activator
C 99993 Cell motility
D PMI0871 putative lipoprotein K07337 K07337; penicillin-binding protein activator
D PMI0787 conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D PMI0535 fimbrial chaperone K15540 ecpD; chaperone protein EcpD
D PMI2295 syd; putative SecY-interacting protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D PMI2387 terA; tellurite resistance protein K05792 terA; tellurite resistance protein TerA
D PMI2383 terE; tellurite resistance protein K05795 terD; tellurium resistance protein TerD
D PMI2384 terD; tellurite resistance protein K05795 terD; tellurium resistance protein TerD
D PMI2388 terZ; putative tellurite resistance protein K05791 terZ; tellurium resistance protein TerZ
D PMI1015 proQ; ProP effector K03607 proQ; ProP effector
D PMI3009 uspA; universal stress protein A K06149 uspA; universal stress protein A
D PMI1202 uspE; universal stress protein E K14055 uspE; universal stress protein E
D PMI1954 universal stress protein K14061 uspF; universal stress protein F
D PMI1613 universal stress protein K14061 uspF; universal stress protein F
D PMI1006 uspF; universal stress protein F K14061 uspF; universal stress protein F
D PMI1611 universal stress protein K14061 uspF; universal stress protein F
D PMI1451 uspG2; universal stress protein G K11932 uspG; universal stress protein G
D PMI1449 uspG1; universal stress protein G K11932 uspG; universal stress protein G
D PMI2881 typA; GTP-binding protein K06207 typA; GTP-binding protein
D PMI0446 PhoH-like ATP-binding protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PMI1439 phoH; PhoH protein (phosphate starvation-inducible protein PsiH) K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PMI2361 putative exported protein K07184 ygiM; SH3 domain protein
D PMI2508 smp; putative membrane protein K07186 smp; membrane protein
D PMI0103 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D PMI0698 lolA; outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D PMI1085 lolB; outer-membrane lipoprotein K02494 lolB; outer membrane lipoprotein LolB
D PMI1811 vacJ; VacJ lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D PMI3317 wzzE; lipopolysaccharide biosynthesis protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D PMI1389 slyB; outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D PMI2276 ompH; outer membrane protein K06142 hlpA; outer membrane protein
D PMI2237 nlpD; lipoprotein K06194 nlpD; lipoprotein NlpD
D PMI3423 nlpI; lipoprotein K05803 nlpI; lipoprotein NlpI
D PMI1350 ompW; outer membrane protein K07275 ompW; outer membrane protein
D PMI0983 putative membrane protein K22116 capC; gamma-polyglutamate biosynthesis protein CapC
D PMI1165 putative lipoprotein K07285 slp; outer membrane lipoprotein
D PMI0112 putative lipoprotein K07286 yajG; uncharacterized lipoprotein
D PMI0651 asmA; putative outer membrane assembly protein K07289 asmA; AsmA protein
D PMI2171 putative membrane protein K07340 ybbJ; inner membrane protein
D PMI1223 HlyD-family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D PMI3432 HlyD-family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D PMI1286 osmB; osmotically-inducible lipoprotein K04062 osmB; osmotically inducible lipoprotein OsmB
D PMI1846 putative DNA-binding protein K15539 rodZ; cytoskeleton protein RodZ
D PMI1702 putative membrane protein K21908 hdeD; membrane protein HdeD
C 99994 Others
D PMI2897 phoU; phosphate transport/metabolism protein K02039 phoU; phosphate transport system protein
D PMI3252 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D PMI2386 terB; tellurite resistance protein K05793 terB; tellurite resistance protein TerB
D PMI2385 terC; tellurite resistance protein K05794 terC; tellurite resistance protein TerC
D PMI1541 cutA; divalent-cation tolerance protein (C-type cytochrome biogenesis protein) K03926 cutA; periplasmic divalent cation tolerance protein
D PMI1105 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
D PMI2335 apaG; conserved hypothetical protein K06195 apaG; ApaG protein
D PMI3334 cyaY; CyaY protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D PMI1427 hmuS; hemin transport protein K07225 hmuS; putative hemin transport protein
D PMI0134 putative cytoplasmic sulphur reductase K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PMI1784 cvpA; colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D PMI2667 putative mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K03796 bax; Bax protein
D PMI0777 pqiB; paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D PMI0396 putative exported protein K05811 yfiM; putative lipoprotein
D PMI2421 putative phospholipid-binding protein K04065 osmY; hyperosmotically inducible periplasmic protein
D PMI1003 conserved hypothetical protein K04477 ycdX; putative hydrolase
D PMI1898 grcA; autonomous glycyl radical cofactor K06866 grcA; autonomous glycyl radical cofactor
D PMI2478 putative DNA helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D PMI1031 csaA; putative protein secretion chaperone K06878 K06878; tRNA-binding protein
D PMI0206 putative iron-sulphur protein K15724 erpA; iron-sulfur cluster insertion protein
D PMI1416 sufA; putative scaffold protein for iron-sulfur cluster assembly K05997 sufA; Fe-S cluster assembly protein SufA
D PMI1415 sufB; putative component of cysteine desulfurase activator complex K09014 sufB; Fe-S cluster assembly protein SufB
D PMI1413 sufD; subunit of cysteine desulfurase activator complex K09015 sufD; Fe-S cluster assembly protein SufD
D PMI1020 putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D PMI1525 putative phophotriesterase K07048 PTER; phosphotriesterase-related protein
D PMI2838 putative membrane protein K07058 K07058; membrane protein
D PMI2545 fxsA; membrane protein FxsA (suppressor of F exclusion of phage T7) K07113 fxsA; UPF0716 protein FxsA
D PMI1411 sufE; cysteine desulfuration protein K02426 sufE; cysteine desulfuration protein SufE
D PMI2303 putative cysteine desulfuration protein K02426 sufE; cysteine desulfuration protein SufE
D PMI0887 conserved hypothetical protein K07153 hflD; high frequency lysogenization protein
D PMI2659 caiE; putative transferase in carnitine metabolism K08279 caiE; carnitine operon protein CaiE
D PMI2645 putative membrane protein K03744 lemA; LemA protein
D PMI0167 putative membrane protein K03744 lemA; LemA protein
D PMI2802 slyX; conserved hypothetical protein K03745 slyX; SlyX protein
D PMI3718 creA; conserved hypothetical protein K05805 creA; CreA protein
D PMI2105 sprT; putative metallopeptidase K02742 sprT; SprT protein
D PMI1785 dedD; putative membrane protein K03749 dedD; DedD protein
D PMI3028 damX; putative membrane protein K03112 damX; DamX protein
D PMI0641 sanA; putative transport protein K03748 sanA; SanA protein
D PMI1788 dedA; putative membrane protein K03975 dedA; membrane-associated protein
D PMI0776 pqiA; paraquat-inducible membrane protein A K03808 pqiA; paraquat-inducible protein A
D PMI1013 putative membrane protein K03808 pqiA; paraquat-inducible protein A
D PMI1371 putative membrane protein K08990 ycjF; putative membrane protein
D PMI3603 putative membrane protein K08993 yhhL; putative membrane protein
D PMI0488 putative phage membrane protein K08996 yagU; putative membrane protein
D PMI1492 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D PMI1610 psiE; putative membrane protein K13256 psiE; protein PsiE
D PMI0085 phnA; conserved hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D PMI2142 aslB; Radical SAM superfamily protein (probable arylsulfatase-activating protein) K06871 K06871; uncharacterized protein
D PMI2644 putative membrane protein K06872 K06872; uncharacterized protein
D PMI2812 conserved hypothetical protein K06887 K06887; uncharacterized protein
D PMI0733 conserved hypothetical protein K06887 K06887; uncharacterized protein
D PMI0178 putative putative membrane protein K06887 K06887; uncharacterized protein
D PMI1278 putative exported protein K06889 K06889; uncharacterized protein
D PMI1177 putative exported protein K06889 K06889; uncharacterized protein
D PMI0614 putative membrane protein K06890 K06890; uncharacterized protein
D PMI1980 putative phage baseplate assembly protein K06903 W; Bacteriophage baseplate protein W
D PMI1971 putative regulator of late phage gene expression K06905 D; Bacteriophage probable baseplate hub protein
D PMI1972 putative phage tail assembly protein K06906 gpU; phage tail protein
D PMI1976 probable major tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D PMI1975 probable major tail tube protein K06908 FII; Bacteriophage tail tube protein
D PMI1372 putative ATP-binding protein K06918 K06918; uncharacterized protein
D PMI0791 putative CoA-binding protein K06929 K06929; uncharacterized protein
D PMI1391 conserved hypothetical protein K06938 K06938; uncharacterized protein
D PMI1941 conserved hypothetical protein K06940 K06940; uncharacterized protein
D PMI3481 putative ATP/GTP-binding protein K06946 K06946; uncharacterized protein
D PMI1019 putative sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein
D PMI2346 conserved hypothetical protein K07000 K07000; uncharacterized protein
D PMI0874 conserved hypothetical protein K07000 K07000; uncharacterized protein
D PMI1238 putative pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D PMI0823 putative sulphatase K07014 K07014; uncharacterized protein
D PMI1944 putative exported protein K07017 K07017; uncharacterized protein
D PMI2816 putative hydrolase K07019 K07019; uncharacterized protein
D PMI1561 putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D PMI2804 putative exported protein K07070 K07070; uncharacterized protein
D PMI1781 conserved hypothetical protein K07071 K07071; uncharacterized protein
D PMI1544 conserved hypothetical protein K07074 K07074; uncharacterized protein
D PMI1543 conserved hypothetical protein K07074 K07074; uncharacterized protein
D PMI0048 conserved hypothetical protein K07078 K07078; uncharacterized protein
D PMI1056 putative TRAP-type transport system substrate-binding protein K07080 K07080; uncharacterized protein
D PMI1801 putative membrane protein K07090 K07090; uncharacterized protein
D PMI3517 putative membrane protein K07090 K07090; uncharacterized protein
D PMI3560 putative membrane protein K07090 K07090; uncharacterized protein
D PMI1813 putative membrane protein K07090 K07090; uncharacterized protein
D PMI1396 putative membrane protein K07090 K07090; uncharacterized protein
D PMI3386 putative exported protein K07109 K07109; uncharacterized protein
D PMI0041 putative membrane protein K07112 K07112; uncharacterized protein
D PMI2102 putative membrane protein K07112 K07112; uncharacterized protein
D PMI2103 putative membrane protein K07112 K07112; uncharacterized protein
D PMI0157 putative membrane-associated ammonia monooxygenase K07120 K07120; uncharacterized protein
D PMI3692 putative lipoprotein K07121 K07121; uncharacterized protein
D PMI0007 putative exported protein K07126 K07126; uncharacterized protein
D PMI1926 putative exported protein K07126 K07126; uncharacterized protein
D PMI1110 putative membrane protein K07136 K07136; uncharacterized protein
D PMI1091 conserved hypothetical protein K07139 K07139; uncharacterized protein
D PMI0773 putative iron-sulfur binding protein K07140 K07140; MOSC domain-containing protein
D PMI0640 putative membrane protein K07148 K07148; uncharacterized protein
D PMI3129 conserved hypothetical protein K08998 K08998; uncharacterized protein
D PMI0422 conserved hypothetical protein K09158 K09158; uncharacterized protein
D PMI1174 conserved hypothetical protein K09160 K09160; uncharacterized protein
D PMI1769 conserved hypothetical protein K09161 K09161; uncharacterized protein
D PMI1258 conserved hypothetical protein K09768 K09768; uncharacterized protein
D PMI1558 putative membrane protein K09790 K09790; uncharacterized protein
D PMI0721 conserved hypothetical protein K09791 K09791; uncharacterized protein
D PMI1956 conserved hypothetical protein K09794 K09794; uncharacterized protein
D PMI0991 conserved hypothetical protein K09794 K09794; uncharacterized protein
D PMI2669 pacB; putative peptidoglycan O-acyl transferase K09795 K09795; uncharacterized protein
D PMI3179 putative exported polysaccharide deacetylase K09798 K09798; uncharacterized protein
D PMI1904 conserved hypothetical protein K09801 K09801; uncharacterized protein
D PMI0851 conserved hypothetical protein K09802 K09802; uncharacterized protein
D PMI2036 putative exported protein K09807 K09807; uncharacterized protein
D PMI0359 putative exported protein K05952 K05952; uncharacterized protein
D PMI0778 putative lipoprotein protein K09857 K09857; uncharacterized protein
D PMI0005 conserved hypothetical protein K09861 K09861; uncharacterized protein
D PMI2054 conserved hypothetical protein K09862 K09862; uncharacterized protein
D PMI2772 conserved hypothetical protein K09891 K09891; uncharacterized protein
D PMI2918 conserved hypothetical protein K09894 K09894; uncharacterized protein
D PMI2025 conserved hypothetical protein K09895 K09895; uncharacterized protein
D PMI2830 conserved hypothetical protein K09896 K09896; uncharacterized protein
D PMI3296 conserved hypothetical protein K09897 K09897; uncharacterized protein
D PMI2817 conserved hypothetical protein K09898 K09898; uncharacterized protein
D PMI1770 conserved hypothetical protein K09899 K09899; uncharacterized protein
D PMI1358 conserved hypothetical protein K09901 K09901; uncharacterized protein
D PMI1171 conserved hypothetical protein K09902 K09902; uncharacterized protein
D PMI0824 conserved hypothetical protein K09904 K09904; uncharacterized protein
D PMI1104 conserved hypothetical protein K09907 K09907; uncharacterized protein
D PMI3667 putative membrane protein K09908 K09908; uncharacterized protein
D PMI2039 conserved hypothetical protein K09910 K09910; uncharacterized protein
D PMI0784 conserved hypothetical protein K09911 K09911; uncharacterized protein
D PMI2986 conserved hypothetical protein K09912 K09912; uncharacterized protein
D PMI1502 conserved hypothetical protein K09916 K09916; uncharacterized protein
D PMI1604 conserved hypothetical protein K09917 K09917; uncharacterized protein
D PMI3337 conserved hypothetical protein K09921 K09921; uncharacterized protein
D PMI1940 putative membrane protein K09922 K09922; uncharacterized protein
D PMI0328 conserved hypothetical protein K09923 K09923; uncharacterized protein
D PMI1821 conserved hypothetical protein K09954 K09954; uncharacterized protein
D PMI2175 conserved hypothetical protein K09973 K09973; uncharacterized protein
D PMI1942 putative exported protein K09974 K09974; uncharacterized protein
D PMI1184 putative exported protein K09978 K09978; uncharacterized protein
D PMI3447 conserved hypothetical protein K09979 K09979; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 6, 2024