+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Pseudomonas syringae pv. tomato DC3000

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D PSPTO_2386 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PSPTO_3427 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E PSPTO_4217 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) C HU (heat unstable protein) D PSPTO_5472 DNA-binding protein HU family K05787 hupA; DNA-binding protein HU-alpha D PSPTO_3723 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D PSPTO_1266 DNA-binding protein HU family K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D PSPTO_2384 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D PSPTO_1751 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D PSPTO_4897 cbpA; curved-DNA-binding protein K05516 cbpA; curved DNA-binding protein D PSPTO_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PSPTO_3983 Dps family protein K04047 dps; starvation-inducible DNA-binding protein D PSPTO_4865 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PSPTO_4942 hfq; hfq protein K03666 hfq; host factor-I protein D PSPTO_4361 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PSPTO_0100 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PSPTO_4793 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PSPTO_1265 nucleoid-associated family protein K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D PSPTO_3658 chromosome segregation SMC protein, putative K03529 smc; chromosome segregation protein D PSPTO_1812 conserved protein of unknown function K05896 scpA; segregation and condensation protein A D PSPTO_1813 conserved hypothetical protein TIGR00281 K06024 scpB; segregation and condensation protein B C Divisome proteins D PSPTO_4404 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D PSPTO_1555 conserved protein of unknown function K05589 ftsB; cell division protein FtsB D PSPTO_0428 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D PSPTO_4414 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PSPTO_3349 ftsK; cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D PSPTO_4415 cell division protein FtsL, putative K03586 ftsL; cell division protein FtsL D PSPTO_4405 cell division protein FtsQ, putative K03589 ftsQ; cell division protein FtsQ D PSPTO_4409 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D PSPTO_0429 ftsX; putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein D PSPTO_4403 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PSPTO_3657 cell division protein ZipA, putative K03528 zipA; cell division protein ZipA D PSPTO_5226 conserved protein of unknown function K09888 zapA; cell division protein ZapA D PSPTO_0469 conserved protein of unknown function K09888 zapA; cell division protein ZapA D PSPTO_5225 conserved protein of unknown function K09892 zapB; cell division protein ZapB D PSPTO_3592 ATPase, putative K06916 zapE; cell division protein ZapE D PSPTO_4428 ATPase, putative K06916 zapE; cell division protein ZapE D PSPTO_4945 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PSPTO_5528 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PSPTO_4303 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D PSPTO_3872 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D PSPTO_3873 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D PSPTO_3874 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D PSPTO_3511 cell division inhibitor, putative K13053 sulA; cell division inhibitor SulA C Other chromosome partitioning proteins D PSPTO_4472 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D PSPTO_4471 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D PSPTO_4470 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D PSPTO_4824 rodA; rod-shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D PSPTO_5608 ParA family protein K03496 parA; chromosome partitioning protein D PSPTO_5090 ParA family protein K03496 parA; chromosome partitioning protein D PSPTO_B0021 conserved hypothetical protein K03496 parA; chromosome partitioning protein D PSPTO_1986 ParA family protein K03496 parA; chromosome partitioning protein D PSPTO_A0014 ATPase, ParA family K03496 parA; chromosome partitioning protein D PSPTO_0033 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PSPTO_5607 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PSPTO_A0008 partion protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PSPTO_4960 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PSPTO_4963 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PSPTO_5610 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PSPTO_5609 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PSPTO_0222 xerC; integrase/recombinase XerC K03733 xerC; integrase/recombinase XerC D PSPTO_1478 xerD; integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD D PSPTO_4146 ParA family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D PSPTO_0343 engB; GTP-binding protein EngB K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024