+E Replication protein KO
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DNA Replication Proteins - Rattus norvegicus (rat)
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
D 313479 Orc1; origin recognition complex subunit 1 K02603 ORC1; origin recognition complex subunit 1
D 301430 Orc2; origin recognition complex subunit 2 K02604 ORC2; origin recognition complex subunit 2
D 313138 Orc3; origin recognition complex subunit 3 K02605 ORC3; origin recognition complex subunit 3
D 295596 Orc4; origin recognition complex subunit 4 K02606 ORC4; origin recognition complex subunit 4
D 362304 Orc5; origin recognition complex subunit 5 K02607 ORC5; origin recognition complex subunit 5
D 291927 Orc6; origin recognition complex subunit 6 K02608 ORC6; origin recognition complex subunit 6
D 292071 Cdt1; DNA replication factor Cdt1 K10727 CDT1; chromatin licensing and DNA replication factor 1
D 360621 Cdc6; cell division control protein 6 homolog K02213 CDC6; cell division control protein 6
D 312538 Mcm2; DNA replication licensing factor MCM2 K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3]
D 316273 Mcm3; DNA replication licensing factor MCM3 K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3]
D 29728 Mcm4; DNA replication licensing factor MCM4 K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3]
D 29685 Mcm6; DNA replication licensing factor MCM6 K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3]
D 288532 Mcm7; DNA replication licensing factor MCM7 K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3]
C CDK (cyclin dependent kinase)
D 114494 Ccna2; cyclin-A2 K06627 CCNA; cyclin-A
D 295052 Ccna1; cyclin-A1 K06627 CCNA; cyclin-A
D 362485 Ccne2; G1/S-specific cyclin-E2 K06626 CCNE; G1/S-specific cyclin-E1
D 25729 Ccne1; G1/S-specific cyclin-E1 K06626 CCNE; G1/S-specific cyclin-E1
D 362817 Cdk2; cyclin-dependent kinase 2 K02206 CDK2; cyclin-dependent kinase 2 [EC:2.7.11.22]
C DDK (Dbf-4 dependent kinase)
D 360908 Cdc7; cell division cycle 7-related protein kinase K02214 CDC7; cell division control protein 7 [EC:2.7.11.1]
D 312046 Dbf4; protein DBF4 homolog A K06629 DBF4; protein DBF4
C GINS complex
D 499914 Gins1; DNA replication complex GINS protein PSF1 K10732 GINS1; GINS complex subunit 1
D 292058 Gins2; DNA replication complex GINS protein PSF2 K10733 GINS2; GINS complex subunit 2
D 307639 Gins3; DNA replication complex GINS protein PSF3 K10734 GINS3; GINS complex subunit 3
D 290842 Gins4; DNA replication complex GINS protein SLD5 K10735 GINS4; GINS complex subunit 4
C Other initiation factors
D 315969 Topbp1; DNA topoisomerase 2-binding protein 1 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D 300057 Recql4; ATP-dependent DNA helicase Q4 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D 287961 Cdc45; cell division control protein 45 homolog K06628 CDC45; cell division control protein 45
D 296178 Mcm8; DNA helicase MCM8 K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
D 307126 Mcm10; protein MCM10 homolog K10736 MCM10; minichromosome maintenance protein 10
D 500837 Helb; DNA helicase B K15254 HELB; DNA helicase B [EC:5.6.2.3]
D 691074 Fam111al1; serine protease FAM111A-like K24274 FAM111A; protein FAM111A
D 499322 Fam111a; FAM111 trypsin like peptidase A K24274 FAM111A; protein FAM111A
D 299334 Cinp; cyclin-dependent kinase 2-interacting protein K26052 CINP; cyclin-dependent kinase 2-interacting protein
D 500870 Mtbp; mdm2-binding protein K26116 MTBP; Mdm2-binding protein
D 308768 Ticrr; treslin isoform X2 K26117 TICRR; Treslin
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
D 85241 Pola1; DNA polymerase alpha catalytic subunit K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7]
D 85242 Pola2; DNA polymerase alpha subunit B K02321 POLA2; DNA polymerase alpha subunit B
D 246327 Prim1; DNA primase small subunit isoform 2 K02684 PRI1; DNA primase small subunit [EC:2.7.7.102]
D 301323 Prim2; DNA primase large subunit isoform 1 K02685 PRI2; DNA primase large subunit
C DNA polymerase epsilon complex
D 304573 Pole; DNA polymerase epsilon catalytic subunit A K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
D 299112 Pole2; DNA polymerase epsilon subunit 2 K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
D 298098 Pole3; DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
D 362385 Pole4; DNA polymerase epsilon subunit 4 K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
C DNA polymerase delta complex
D 59294 Pold1; DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
D 289758 Pold2; DNA polymerase delta subunit 2 K02328 POLD2; DNA polymerase delta subunit 2
D 293144 Pold3; DNA polymerase delta subunit 3 K03504 POLD3; DNA polymerase delta subunit 3
D 361698 Pold4; DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
C DNA polymerase gamma complex (mitochondrial)
D 85472 Polg; DNA polymerase subunit gamma-1 K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7]
D 303612 Polg2; DNA polymerase subunit gamma-2, mitochondrial K02333 POLG2; DNA polymerase gamma 2
C RPA (replication protein A)
D 287524 Rpa1; replication protein A 70 kDa DNA-binding subunit K07466 RFA1; replication factor A1
D 59102 Rpa2; replication protein A 32 kDa subunit K10739 RFA2; replication factor A2
D 296883 Rpa3; replication protein A 14 kDa subunit K10740 RPA3; replication factor A3
D 100362927 Rpa3l1; replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
C RFC (replication factor C)
D 89809 Rfc1; replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
D 288003 Rfc4; replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D 116468 Rfc2; replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 304528 Rfc5; replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D 288414 Rfc3; replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C RNase H
D 298933 Rnaseh1; ribonuclease H1 isoform 1 precursor K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D 364974 Rnaseh2a; ribonuclease H2 subunit A K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4]
D 361056 Rnaseh2b; ribonuclease H2 subunit B K10744 RNASEH2B; ribonuclease H2 subunit B
D 100361939 Rnaseh2c; ribonuclease H2 subunit C K10745 RNASEH2C; ribonuclease H2 subunit C
C Other elongation factors
D 25737 Pcna; proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 309762 Dna2; DNA replication ATP-dependent helicase/nuclease DNA2 K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
D 84490 Fen1; flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D 305000 Exo1; exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
D 304761 Zranb3; DNA annealing helicase and endonuclease ZRANB3 isoform X1 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 81513 Lig1; DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D 303348 Atad5; ATPase family AAA domain-containing protein 5 isoform X3 K26118 ATAD5; ATPase family AAA domain-containing protein 5
B DNA Replication Termination Factors
C DNA methylation enzymes
D 84350 Dnmt1; DNA (cytosine-5)-methyltransferase 1 K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D 444984 Dnmt3a; DNA (cytosine-5)-methyltransferase 3A isoform 1 K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
D 444985 Dnmt3b; DNA (cytosine-5)-methyltransferase 3B K17399 DNMT3B; DNA (cytosine-5)-methyltransferase 3B [EC:2.1.1.37]
C Prevention of re-replication factors
D 291137 Gmnn; geminin K10749 GMNN; geminin
D 688802 Mcidas; multicilin K26119 MCIDAS; multicilin
D 25203 Ccnb1; G2/mitotic-specific cyclin-B1 K05868 CCNB1; G2/mitotic-specific cyclin-B1
D 363088 Ccnb2; G2/mitotic-specific cyclin-B2 K21770 CCNB2; G2/mitotic-specific cyclin-B2
D 317389 Ccnb3; G2/mitotic-specific cyclin-B3 K21771 CCNB3; G2/mitotic-specific cyclin-B3
D 54237 Cdk1; cyclin-dependent kinase 1 K02087 CDK1; cyclin-dependent kinase 1 [EC:2.7.11.22 2.7.11.23]
C Telomere proteins
D Shelterin complex
E 690237 Pot1b; protection of telomeres protein 1-like isoform X4 K11109 POT1; protection of telomeres protein 1
E 500054 Pot1; protection of telomeres protein 1 K11109 POT1; protection of telomeres protein 1
E 297758 Terf1; telomeric repeat-binding factor 1 K11110 TERF1; telomeric repeat-binding factor 1
E 361403 Terf2; telomeric repeat-binding factor 2 isoform 1 K11111 TERF2; telomeric repeat-binding factor 2
E 290232 Tinf2; TERF1-interacting nuclear factor 2 K11112 TINF2; TERF1-interacting nuclear factor 2
E 307861 Terf2ip; telomeric repeat-binding factor 2-interacting protein 1 K11113 TERF2IP; telomeric repeat-binding factor 2-interacting protein 1
E 307798 Acd; adrenocortical dysplasia protein homolog K11114 ACD; adrenocortical dysplasia protein
D TERB1-TERB2-MAJIN complex
E 307615 Terb1; telomere repeats-binding bouquet formation protein 1 isoform X1 K25749 TERB1; telomere repeats-binding bouquet formation protein 1
E 691952 Terb2; telomere repeats-binding bouquet formation protein 2 K25750 TERB2; telomere repeats-binding bouquet formation protein 2
E 499306 Majin; membrane-anchored junction protein K25751 MAJIN; membrane-anchored junction protein
D CST complex (animals)
E 303238 Ctc1; CST complex subunit CTC1 K23311 CTC1; CST complex subunit CTC1
E 294025 Stn1; CST complex subunit STN1 K23312 STN1; CST complex subunit STN1
E 360664 Ten1; CST complex subunit TEN1 K23313 TEN1; CST complex subunit TEN1
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D 287522 Smg6; telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
D 681012 Smg5; nonsense-mediated mRNA decay factor SMG5 isoform X1 K11125 SMG5; protein SMG5
D 314915 Smg5l1; similar to Est1p-like protein B isoform 1 K11125 SMG5; protein SMG5
D 301965 Tert; telomerase reverse transcriptase K11126 TERT; telomerase reverse transcriptase [EC:2.7.7.49]
D 64523 Tep1; telomerase protein component 1 K11127 TEP1; telomerase protein component 1
D Dyskerin complex
E 499709 Gar1; H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
E 691534 Nop10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
E 108352568 Nop10l2; H/ACA ribonucleoprotein complex subunit 3-like K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
E 108350600 Nop10l1; H/ACA ribonucleoprotein complex subunit 3-like K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
E 170944 Dkc1; H/ACA ribonucleoprotein complex subunit DKC1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
C Telomerase complex (fungi)
D 301965 Tert; telomerase reverse transcriptase K11126 TERT; telomerase reverse transcriptase [EC:2.7.7.49]
D Sm core complex
E 171365 Snrpb; small nuclear ribonucleoprotein-associated protein B K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 291794 Snrpd1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
E 680309 Snrpd2; small nuclear ribonucleoprotein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2
E 687711 Snrpd3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 100360682 Snrpe; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 100362099 Snrpepl2; small nuclear ribonucleoprotein polypeptide E like 2 K11097 SNRPE; small nuclear ribonucleoprotein E
E 120098617 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 103691953 Snrpel3; small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 108350623 small nuclear ribonucleoprotein F-like K11098 SNRPF; small nuclear ribonucleoprotein F
E 680737 Snrpf; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 687679 Snrpgl1; small nuclear ribonucleoprotein polypeptide G like 1 K11099 SNRPG; small nuclear ribonucleoprotein G
E 681031 Snrpg; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 120100604 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 120099778 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
C ELG1-RFC complex
D 288003 Rfc4; replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D 116468 Rfc2; replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 304528 Rfc5; replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D 288414 Rfc3; replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C MRN complex
D 64046 Mre11; double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
D 64012 Rad50; DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D 85482 Nbn; nibrin K10867 NBN; nibrin
C Other termination factors
D 300711 Atm; serine-protein kinase ATM K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 290805 Wrn; bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
D 308755 Blm; BLM RecQ like helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D 360748 Prkdc; DNA-dependent protein kinase catalytic subunit K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
D 304719 Ercc4; DNA repair endonuclease XPF isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D 103693257 Ercc4l1; DNA repair endonuclease XPF K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D 25591 Parp1; poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
D 290027 Parp2; poly [ADP-ribose] polymerase 2 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D 300985 Parp3; protein mono-ADP-ribosyltransferase PARP3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D 361046 Parp4; poly [ADP-ribose] polymerase 4 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D 309512 Tnks2; poly [ADP-ribose] polymerase tankyrase-2 K10799 TNKS; tankyrase [EC:2.4.2.30]
D 290794 Tnks; poly [ADP-ribose] polymerase tankyrase-1 K10799 TNKS; tankyrase [EC:2.4.2.30]
D 305963 Pinx1; PIN2/TERF1-interacting telomerase inhibitor 1 K11135 PINX1; Pin2-interacting protein X1
D 362288 Rtel1; regulator of telomere elongation helicase 1 K11136 RTEL1; regulator of telomere elongation helicase 1 [EC:5.6.2.3]
D 302986 Telo2; telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 288920 Trir; telomerase RNA component interacting RNase K01149 TRIR; telomerase RNA component interacting RNase [EC:3.1.13.-]
D 295602 Rif1; telomere-associated protein RIF1 isoform X1 K11138 RIF1; telomere-associated protein RIF1
D 367645 Pif1; ATP-dependent DNA helicase PIF1 K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D 361162 Purg; purine-rich element-binding protein gamma K21800 PURG; purine-rich element-binding protein gamma
D 287432 Wrap53; telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
D 289315 Sde2; UBL fusion protein SDE2 K25059 SDE2; replication stress response regulator SDE2
D 296410 Rtfdc1; replication termination factor 2 K25186 RTF2; replication termination factor 2
B DNA Topoisomerases
C 64550 Top1; DNA topoisomerase 1 K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
C 300029 Top1mt; DNA topoisomerase I, mitochondrial K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
C 360243 Top2a; DNA topoisomerase 2-alpha K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
C 361100 Top2b; DNA topoisomerase 2-beta K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
C 303194 Top3a; DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
C 287930 Top3b; DNA topoisomerase 3-beta-1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D 54304 Ssbp1; single-stranded DNA-binding protein, mitochondrial precursor K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
D RNase H
E 298933 Rnaseh1; ribonuclease H1 isoform 1 precursor K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Other elongation factors
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E 298933 Rnaseh1; ribonuclease H1 isoform 1 precursor K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
E 309762 Dna2; DNA replication ATP-dependent helicase/nuclease DNA2 K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
E 84490 Fen1; flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 81513 Lig1; DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022