+E Ribosome biogenesis KO
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Ribosome Biogenesis - Rickettsia typhi Wilmington
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D RT0019 rnc; RNase D K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C RT0018 Era-like GTP-binding protein K03595 era; GTPase
C RT0831 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C RT0804 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C RT0540 nusA; transcription elongation protein NusA (N utilization substance protein A) K02600 nusA; transcription termination/antitermination protein NusA
C RT0152 nusB; transcription termination protein NusB (N utilization substance protein B) K03625 nusB; transcription antitermination protein NusB
C RT0124 nusG; transcription antitermination protein NusG (N utilization substance protein G) K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D RT0666 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RT0533 probable methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RT0159 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RT0075 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RT0557 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RT0732 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RT0543 tlyA; hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D RT0656 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RT0153 ftsJ; rRNA (uridine-2'-O-)-methyltransferase (23S ribosomal RNA methyltransferase) K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RT0543 tlyA; hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RT0532 rluB; Pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RT0249 rluC; Pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RT0834 rluD; Pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C RT0337 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
B rRNA processing factors
C RT0019 rnc; RNase D K03685 rnc; ribonuclease III [EC:3.1.26.3]
C RT0248 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
C RT0321 possible Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
C RT0661 rhlE; probable ATP-dependent RNA helicase RhlE K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
B GTPases
C RT0018 Era-like GTP-binding protein K03595 era; GTPase
C RT0673 engA; probable GTP-binding protein EngA K03977 engA; GTPase
C RT0831 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C RT0837 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C RT0422 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C RT0541 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
C RT0799 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
C RT0726 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
C RT0592 probable GTP-binding protein K06942 ychF; ribosome-binding ATPase
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024