+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Staphylococcus aureus subsp. aureus USA300_FPR3757 (CA-MRSA)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D SAUSA300_1126 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C SAUSA300_1527 era; GTP-binding protein Era K03595 era; GTPase C SAUSA300_1600 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C SAUSA300_1159 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA C SAUSA300_1473 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB C SAUSA300_0521 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D SAUSA300_1699 pseudouridine synthase, family 1 K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D SAUSA300_0470 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D SAUSA300_1110 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D SAUSA300_0526 Methyltransferase small domain K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D SAUSA300_1023 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D SAUSA300_1537 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D SAUSA300_2644 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D SAUSA300_1073 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D SAUSA300_0466 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] C 23S rRNA modification factors D SAUSA300_0517 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D SAUSA300_0026 conserved hypothetical protein OrfX K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D SAUSA300_0981 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D SAUSA300_1111 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D SAUSA300_1878 rumA; RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D SAUSA300_1443 rluB; ribosomal large subunit pseudouridine synthase B, RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D SAUSA300_1800 ribosomal large subunit pseudouridine synthase, RluD subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D SAUSA300_0909 pseudouridine synthases, RluA subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D SAUSA300_1090 conserved hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D SAUSA300_pUSA0307 ermC; rRNA adenine N-6-methyltransferase (Macrolide-lincosamide-streptogramin B resistance protein) K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] B ribosomal protein modification factors C SAUSA300_2003 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C SAUSA300_0343 acetyltransferase, GNAT family K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] C SAUSA300_1132 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C SAUSA300_1538 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C SAUSA300_1126 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C SAUSA300_1573 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C SAUSA300_0516 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C SAUSA300_2037 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C SAUSA300_1518 ATP-dependent RNA helicase, DEAD/DEAH box family K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C SAUSA300_1527 era; GTP-binding protein Era K03595 era; GTPase C SAUSA300_1114 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C SAUSA300_1364 engA; GTP-binding protein EngA K03977 engA; GTPase C SAUSA300_1600 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] C SAUSA300_1136 putative GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A C SAUSA300_1198 putative GTP-binding protein K03665 hflX; GTPase C SAUSA300_1556 putative GTP-binding protein K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C SAUSA300_2070 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C SAUSA300_1590 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C SAUSA300_1163 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C SAUSA300_1158 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP C SAUSA300_0003 conserved hypothetical protein K14761 rlbA; ribosome-associated protein C SAUSA300_1551 conserved hypothetical protein K09710 ybeB; ribosome-associated protein C SAUSA300_1530 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor C SAUSA300_1554 conserved hypothetical protein K07574 yhbY; RNA-binding protein C SAUSA300_0736 yfiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor C SAUSA300_0364 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C SAUSA300_1026 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024