+E Transcription factors KO #

  Transcription Factors - Staphylococcus aureus subsp. aureus Newman

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family C LysR family C DeoR family D NWMN_2100 lacR; lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D NWMN_0667 fructose operon transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D NWMN_1467 CBS domain pair protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family D NWMN_0205 rbsR; ribose transcriptional repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D NWMN_1629 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D NWMN_1949 scrR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor C GntR family D NWMN_0440 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D NWMN_0198 transcriptional regulator, GntR family protein K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA D NWMN_1186 transcriptional regulator, GntR family protein K03710 K03710; GntR family transcriptional regulator D NWMN_0480 GntR family regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D NWMN_0052 transcriptional regulator GntR family protein K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC D NWMN_2403 gntR; gluconate operon transcriptional repressor K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor C TetR/AcrR family D NWMN_2564 icaR; biofilm synthesis ica operon transcriptional regulator K21453 icaR; TetR/AcrR family transcriptional regulator, biofilm operon repressor C Lrp/AsnC family C LuxR family C MarR family D NWMN_2418 MarR family regulatory protein K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D NWMN_0655 MarR family regulatory protein K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA D NWMN_0326 MarR family regulatory protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA D NWMN_1655 staphylococcal accessory regulator Rot K20338 rot; MarR family transcriptional regulator, global regulator for virulence D NWMN_2258 tcaR; teicoplanin resistance operon transcriptional regulator TcaR K21454 tcaR; MarR family transcriptional regulator, teicoplanin-associated locus regulator D NWMN_2286 MarR family regulatory protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D NWMN_1216 glnR; glutamine synthetase repressor K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D NWMN_2105 transcriptional regulator MerR family protein K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator C Fur family D NWMN_1406 iron uptake regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NWMN_1457 zinc-specific metalloregulatory protein K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D NWMN_1753 transcriptional regulator Fur family protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family D NWMN_2530 transcriptional regulator Crp/Fnr family protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator C Rrf2 family D NWMN_1528 conserved hypothetical protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor C ArsR family D NWMN_1664 arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D NWMN_2049 zinc and cobalt transport repressor protein K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family C PadR family D NWMN_2590 transcriptional regulator PadR-like family protein K10947 K10947; PadR family transcriptional regulator C Other families D NWMN_0604 feoA; iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D NWMN_2225 phosphosugar-binding transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator D NWMN_1367 birA; BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D NWMN_2511 conserved hypothetical protein K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator D NWMN_0459 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D NWMN_1953 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D NWMN_1165 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family D NWMN_1270 transcription antiterminator K03480 glcT; transcriptional antiterminator D NWMN_2058 transcriptional antiterminator BglG family protein K03483 mtlR; mannitol operon transcriptional activator D NWMN_2539 transcriptional antiterminator BglG family protein K02538 manR; mannose operon transcriptional activator C Others D NWMN_1991 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D NWMN_0353 chromosome partioning ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NWMN_2609 chromosome partioning ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NWMN_0068 sbnI; SbnI protein K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225] D NWMN_1206 glpP; glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator D NWMN_1426 ahrC; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D NWMN_1485 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D NWMN_1998 transcriptional regulator TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D NWMN_0484 ctsR; transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D NWMN_0740 gapR; glycolytic operon regulator K05311 cggR; central glycolytic genes regulator D NWMN_1109 pryR; pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D NWMN_1579 nrdR; NrdR repressor protein K07738 nrdR; transcriptional repressor NrdR D NWMN_0895 comK; competence transcription factor ComK homolog K02250 comK; competence protein ComK D NWMN_1088 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0