+E Transcription factors KO
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Transcription Factors - Staphylococcus aureus subsp. aureus Newman
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
C LysR family
C DeoR family
D NWMN_2100 lacR; lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D NWMN_0667 fructose operon transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D NWMN_1467 CBS domain pair protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
D NWMN_0205 rbsR; ribose transcriptional repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NWMN_1629 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NWMN_1949 scrR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
C GntR family
D NWMN_0440 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D NWMN_0198 transcriptional regulator, GntR family protein K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D NWMN_1186 transcriptional regulator, GntR family protein K03710 K03710; GntR family transcriptional regulator
D NWMN_0480 GntR family regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NWMN_0052 transcriptional regulator GntR family protein K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC
D NWMN_2403 gntR; gluconate operon transcriptional repressor K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor
C TetR/AcrR family
D NWMN_2564 icaR; biofilm synthesis ica operon transcriptional regulator K21453 icaR; TetR/AcrR family transcriptional regulator, biofilm operon repressor
C Lrp/AsnC family
C LuxR family
C MarR family
D NWMN_2418 MarR family regulatory protein K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D NWMN_0655 MarR family regulatory protein K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA
D NWMN_0326 MarR family regulatory protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D NWMN_1655 staphylococcal accessory regulator Rot K20338 rot; MarR family transcriptional regulator, global regulator for virulence
D NWMN_2258 tcaR; teicoplanin resistance operon transcriptional regulator TcaR K21454 tcaR; MarR family transcriptional regulator, teicoplanin-associated locus regulator
D NWMN_2286 MarR family regulatory protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D NWMN_1216 glnR; glutamine synthetase repressor K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D NWMN_2105 transcriptional regulator MerR family protein K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
C Fur family
D NWMN_1406 iron uptake regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NWMN_1457 zinc-specific metalloregulatory protein K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D NWMN_1753 transcriptional regulator Fur family protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
C CRP/FNR family
D NWMN_2530 transcriptional regulator Crp/Fnr family protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
C Rrf2 family
D NWMN_1528 conserved hypothetical protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
C ArsR family
D NWMN_1664 arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D NWMN_2049 zinc and cobalt transport repressor protein K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
C XRE family
C PadR family
D NWMN_2590 transcriptional regulator PadR-like family protein K10947 K10947; PadR family transcriptional regulator
C Other families
D NWMN_0604 feoA; iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D NWMN_2225 phosphosugar-binding transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D NWMN_1367 birA; BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D NWMN_2511 conserved hypothetical protein K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D NWMN_0459 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D NWMN_1953 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D NWMN_1165 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
D NWMN_1270 transcription antiterminator K03480 glcT; transcriptional antiterminator
D NWMN_2058 transcriptional antiterminator BglG family protein K03483 mtlR; mannitol operon transcriptional activator
D NWMN_2539 transcriptional antiterminator BglG family protein K02538 manR; mannose operon transcriptional activator
C Others
D NWMN_1991 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D NWMN_0353 chromosome partioning ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NWMN_2609 chromosome partioning ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NWMN_0068 sbnI; SbnI protein K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225]
D NWMN_1206 glpP; glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D NWMN_1426 ahrC; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D NWMN_1485 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D NWMN_1998 transcriptional regulator TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D NWMN_0484 ctsR; transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D NWMN_0740 gapR; glycolytic operon regulator K05311 cggR; central glycolytic genes regulator
D NWMN_1109 pryR; pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D NWMN_1579 nrdR; NrdR repressor protein K07738 nrdR; transcriptional repressor NrdR
D NWMN_0895 comK; competence transcription factor ComK homolog K02250 comK; competence protein ComK
D NWMN_1088 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0