+F Repair protein KO #

  DNA Repair and Recombination Proteins - Staphylococcus aureus subsp. aureus Newman

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AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D NWMN_2447 methylated-DNA-protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D NWMN_0660 conserved hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E NWMN_0544 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E NWMN_2245 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E NWMN_1760 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E NWMN_1363 conserved hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D NWMN_2387 hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NWMN_1684 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NWMN_1904 phage dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D NWMN_2447 methylated-DNA-protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D NWMN_0660 conserved hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E NWMN_0544 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E NWMN_2245 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E NWMN_1760 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E NWMN_1559 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] E NWMN_1582 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E NWMN_1363 conserved hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E NWMN_1460 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D RecJ E NWMN_1538 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNA ligase E NWMN_1842 lig; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E NWMN_1583 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E NWMN_0727 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A E NWMN_0726 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B E NWMN_1058 uvrC; uvr ABC system protein, C subunit K03703 uvrC; excinuclease ABC subunit C E NWMN_1843 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E NWMN_1583 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] E NWMN_1842 lig; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F NWMN_0504 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F NWMN_0505 rpoC; DNA-directed RNA polymerase beta' chain protein K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F NWMN_2126 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F NWMN_2032 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta E TRCF (transcription-repair coupling factor) F NWMN_0466 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors E NWMN_1204 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS E NWMN_1056 mutS2; DNA mismatch repair MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Molecular matchmaker E NWMN_1205 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Strand discrimination factor D DNA exonucleases E NWMN_1428 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D DNA polymerase III holoenzyme E NWMN_1597 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E NWMN_1174 polC; DNA polymerase III alpha chain PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] E NWMN_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E NWMN_1489 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E NWMN_0448 holB; DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E NWMN_1832 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E NWMN_0442 dnaX; DNA polymerase III gamma subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E NWMN_1842 lig; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E NWMN_1843 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E NWMN_0358 single-strand DNA-binding family protein K03111 ssb; single-strand DNA-binding protein E NWMN_1909 phage single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein E NWMN_2001 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E NWMN_1520 helicase RecD/TraA family protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] E NWMN_1194 recA; recombinase A K03553 recA; recombination protein RecA E NWMN_1544 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E NWMN_1543 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E NWMN_1122 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] E NWMN_1258 sbcC; exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 E NWMN_1257 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D RecFOR pathway proteins E NWMN_1194 recA; recombinase A K03553 recA; recombination protein RecA E NWMN_0488 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms E NWMN_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF E NWMN_1137 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E NWMN_1538 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] E NWMN_1469 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) E NWMN_0444 recR; recombination protein RecR K06187 recR; recombination protein RecR E NWMN_1425 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) E NWMN_1360 recU; recombination protein U K03700 recU; recombination protein U E NWMN_1544 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E NWMN_1543 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AddAB pathway proteins E NWMN_0838 rexA; exonuclease RexA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] E NWMN_0837 rexB; exonuclease RexB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Other HR factor D Archaeal homologous recombinant proteins E NWMN_1258 sbcC; exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 E NWMN_1257 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F NWMN_0005 gyrA; DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F NWMN_0004 gyrB; DNA gyrase B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F NWMN_1160 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor F NWMN_1382 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F NWMN_1911 conserved hypothetical protein K07455 recT; recombination protein RecT F NWMN_1538 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F NWMN_1469 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) F NWMN_0444 recR; recombination protein RecR K06187 recR; recombination protein RecR F NWMN_1842 lig; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F NWMN_1390 conserved hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F NWMN_0689 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F NWMN_0727 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A F NWMN_0726 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D NWMN_1833 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D NWMN_1276 ImpB/MucB/SamB family DNA-damage repair protein K03502 umuC; DNA polymerase V C Other SOS response factors D NWMN_1194 recA; recombinase A K03553 recA; recombination protein RecA D NWMN_1251 lexA; DNA damage-inducible LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D NWMN_1812 phage repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D NWMN_1425 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D NWMN_0358 single-strand DNA-binding family protein K03111 ssb; single-strand DNA-binding protein D NWMN_1909 phage single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NWMN_2001 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D NWMN_1765 regulatory protein RecX K03565 recX; regulatory protein B Other factors with a suspected DNA repair function C DNA polymerase D NWMN_1055 rpoD; DNA-dependent DNA polymerase beta chain K02347 polX; DNA polymerase (family X) C DNA helicases D NWMN_1366 DnaQ family exonuclease K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] C Modulation of nucleotide pools D NWMN_2387 hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NWMN_1684 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NWMN_1904 phage dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NWMN_0700 nrdE; ribonucleotide-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NWMN_0701 nrdF; ribonucleotide-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C Others D NWMN_1598 RecJ-like phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024