+E Transcription factors KO
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Transcription Factors - Staphylococcus aureus subsp. aureus MW2 (CA-MRSA)
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
C LysR family
C DeoR family
D MW2122 lacR; lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D MW0660 ORFID:MW0660; hypothetical protein, similar to transcription repressor of fructose operon K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D MW1516 conserved hypothetical protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
D MW0247 ORFID:MW0247; hypothetical protein, similar to rbs operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D MW1679 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D MW1966 scrR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
C GntR family
D MW0430 ORFID:MW0430; hypothetical protein, similar to trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D MW0240 ORFID:MW0240; hypothetical protein, similar to transcription regulator GntR family K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D MW1160 ORFID:MW1160; hypothetical protein, similar to transcription regulator GntR family K03710 K03710; GntR family transcriptional regulator
D MW0473 ORFID:MW0473; hypothetical protein, similar to transcription regulator GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D MW2425 gntR; gluconate operon transcriptional repressor K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor
C TetR/AcrR family
D MW2585 icaR; ica operon transcriptional regulator K21453 icaR; TetR/AcrR family transcriptional regulator, biofilm operon repressor
C Lrp/AsnC family
C LuxR family
C MarR family
D MW2440 ORFID:MW2440; hypothetical protein, similar to transcription regulator MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D MW0648 ORFID:MW0648; conserved hypothetical protein, similar to transcriptional regulator K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA
D MW0310 ORFID:MW0310; hypothetical protein, similar to transcription regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D MW1705 rot; repressor of toxins Rot K20338 rot; MarR family transcriptional regulator, global regulator for virulence
D MW2278 tcaR; TcaR transcription regulator K21454 tcaR; MarR family transcriptional regulator, teicoplanin-associated locus regulator
D MW2306 ORFID:MW2306; hypothetical protein, similar to transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D MW1191 glnR; glutamine synthetase repressor K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D MW2128 ORFID:MW2128; hypothetical protein, similar to transcription regulator MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
C Fur family
D MW1452 ORFID:MW1452; ferric uptake regulator homolog K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D MW1506 ORFID:MW1506; ferric uptake regulator homolog K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D MW1801 ORFID:MW1801; transcription regulator Fur family homolog K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
C CRP/FNR family
D MW2552 ORFID:MW2552; hypothetical protein, similar to transcription regulator Crp/Fnr family protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
C Rrf2 family
D MW1576 conserved hypothetical protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
C ArsR family
D MW1713 ORFID:MW1713; arsenical resistance operon repressor homolog K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D MW2069 czrA; repressor protein K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
C XRE family
C PadR family
C Other families
D MW0596 ORFID:MW0596; hypothetical protein, similar to iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D MW2245 ORFID:MW2245; hypothetical protein, similar to transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D MW1346 truncated hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D MW1435 ORFID:MW1435; hypothetical protein, similar to Cro-like protein from Streptococcus pyogenes M1 GAS [Bacteriophage phi Sa 2mw] K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D MW2533 conserved hypothetical protein K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D MW0451 purR; ORFID:MW0451; pur operon repressor homologue K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D MW1970 conserved hypothetical protein K01926 rex; redox-sensing transcriptional repressor
D MW1138 codY; transcription pleiotropic repressor codY K03706 codY; transcriptional pleiotropic repressor
D MW0325 ORFID:MW0325; hypothetical protein, similar to transcriptional repressor K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D MW1993 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C Other families
B Other transcription factors
C BglG family
D MW1244 glcT; transcription antiterminator K03480 glcT; transcriptional antiterminator
D MW2083 ORFID:MW2083; hypothetical protein, similar to transcription antiterminator BglG family K03483 mtlR; mannitol operon transcriptional activator
D MW2561 ORFID:MW2561; hypothetical protein, similar to transcription antiterminator BglG family K02538 manR; mannose operon transcriptional activator
C Others
D MW2010 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D MW2627 ORFID:MW2627; hypothetical protein, similar to DNA-binding protein Spo0J-like homolog K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D MW0336 ORFID:MW0336; hypothetical protein, similar to transcription terminator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D MW0097 sbnI; hypothetical protein K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225]
D MW1180 glpP; glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D MW1473 ahrC; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D MW1534 hrcA; Heat-inducible transcriptional repressor K03705 hrcA; heat-inducible transcriptional repressor
D MW2017 ORFID:MW2017; hypothetical protein, similar to trasncriptional activator TenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D MW0477 ctsR; ORFID:MW0477; transcription repressor of class III stress genes homologue K03708 ctsR; transcriptional regulator of stress and heat shock response
D MW0733 gapR; glycolytic operon regulator K05311 cggR; central glycolytic genes regulator
D MW1081 pyrR; pyrimidine operon repressor chainA K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D MW1629 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D MW0906 ORFID:MW0906; hypothetical protein, similar to competence transcription factor K02250 comK; competence protein ComK
D MW1061 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0