+E Transcription factors KO #

  Transcription Factors - Staphylococcus aureus subsp. aureus N315 (MRSA/VSSA)

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family C LysR family C DeoR family D SA1998 lacR; lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D SA0653 ORFID:SA0653; hypothetical protein, similar to transcription repressor of fructose operon K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D SA1393 conserved hypothetical protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family D SA0261 ORFID:SA0261; hypothetical protein, similar to rbs operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SA1557 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SA1847 scrR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor C GntR family D SA0434 ORFID:SA0434; hypothetical protein, similar to trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D SA0254 ORFID:SA0254; hypothetical protein, similar to transcription regulator GntR family K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA D SA1120 ORFID:SA1120; hypothetical protein, similar to transcription regulator GntR family K03710 K03710; GntR family transcriptional regulator D SA0476 ORFID:SA0476; hypothetical protein, similar to transcription regulator GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D SA0104 ORFID:SA0104; hypothetical protein, similar to transcription regulator GntR family K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC D SA2295 gntR; gluconate operon transcriptional repressor K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor C TetR/AcrR family D SA2458 icaR; ica operon transcriptional regulator IcaR K21453 icaR; TetR/AcrR family transcriptional regulator, biofilm operon repressor C Lrp/AsnC family C LuxR family C MarR family D SA2308 ORFID:SA2308; hypothetical protein, similar to transcription regulator MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D SA0641 ORFID:SA0641; conserved hypothetical protein, similar to transcriptional regulator K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA D SA0322 ORFID:SA0322; hypothetical protein, similar to transcription regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA D SA1583 rot; repressor of toxins Rot K20338 rot; MarR family transcriptional regulator, global regulator for virulence D SA2147 tcaR; TcaR transcription regulator K21454 tcaR; MarR family transcriptional regulator, teicoplanin-associated locus regulator D SA2174 ORFID:SA2174; hypothetical protein, similar to transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D SA1149 glnR; glutamine synthetase repressor K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D SA2002 ORFID:SA2002; hypothetical protein, similar to transcription regulator MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator C Fur family D SA1329 ORFID:SA1329; ferric uptake regulator homolog K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D SA1383 ORFID:SA1383; ferric uptake regulator homolog K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D SA1678 ORFID:SA1678; transcription regulator Fur family homolog K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family D SA2424 ORFID:SA2424; hypothetical protein, similar to transcription regulator Crp/Fnr family protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator C Rrf2 family D SA1453 conserved hypothetical protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor C ArsR family D SAP016 arsR; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D SA1591 ORFID:SA1591; arsenical resistance operon repressor homolog K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D SAP006 cadX; CadX K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D SA1947 czrA; repressor protein K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family C PadR family D SA2484 conserved hypothetical protein K10947 K10947; PadR family transcriptional regulator C Other families D SA0590 ORFID:SA0590; hypothetical protein, similar to iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D SA2115 ORFID:SA2115; hypothetical protein, similar to transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator D SAP012 blaI; PENICILLINASE REPRESSOR K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D SA0040 mecI; methicillin resistance regulatory protein K02546 mecI; BlaI family transcriptional regulator, methicillin resistance regulatory protein D SA1289 ORFID:SA1289; hypothetical protein, similar to bifunctional biotin ligase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D SA2407 conserved hypothetical protein K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator D SA0454 purR; ORFID:SA0454; pur operon repressor homologue K09685 purR; HTH-type transcriptional regulator, purine operon repressor D SA1851 conserved hypothetical protein K01926 rex; redox-sensing transcriptional repressor D SA1098 codY; transcription pleiotropic repressor codY K03706 codY; transcriptional pleiotropic repressor D SA0337 ORFID:SA0337; hypothetical protein, similar to transcriptional repressor K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family D SAS067 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C Other families B Other transcription factors C BglG family D SA1191 glcT; transcription antiterminator K03480 glcT; transcriptional antiterminator D SA1961 ORFID:SA1961; hypothetical protein, similar to transcription antiterminator BglG family K03483 mtlR; mannitol operon transcriptional activator D SA2433 ORFID:SA2433; hypothetical protein, similar to transcription antiterminator BglG family K02538 manR; mannose operon transcriptional activator C Others D SA1890 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D SA2498 ORFID:SA2498; hypothetical protein, similar to DNA-binding protein Spo0J-like homolog K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D SA0348 ORFID:SA0348; hypothetical protein, similar to transcription terminator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D SA0120 sbnI; hypothetical protein K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225] D SA1139 glpP; glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator D SA1351 ahrC; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D SA1411 hrcA; Heat-inducible transcriptional repressor K03705 hrcA; heat-inducible transcriptional repressor D SA1897 ORFID:SA1897; hypothetical protein, similar to trasncriptional activator TenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D SA0480 ctsR; ORFID:SA0480; transcription repressor of class III stress genes homologue K03708 ctsR; transcriptional regulator of stress and heat shock response D SA0726 gapR; glycolytic operon regulator K05311 cggR; central glycolytic genes regulator D SA1041 pyrR; pyrimidine operon repressor chainA K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D SA1509 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR D SA0882 ORFID:SA0882; hypothetical protein, similar to competence transcription factor K02250 comK; competence protein ComK D SA1021 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 5, 2024 #
Classification taken and modified from TRANSFAC 7.0