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Transcription Machinery - Streptomyces coelicolor
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E SCO4729 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E SCO4654 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E SCO4655 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E SCO1478 SC9C5.02c; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E SCO5820 hrdB; RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
E SCO2465 hrdA; RNA polymerase principal sigma factor K03086 rpoD; RNA polymerase primary sigma factor
E SCO0895 hrdC; RNA polymerase principal sigma factor HrdC K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E SCO4769 SCD63.01; RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO4895 2SCK8.21c; RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO5216 SC7E4.13; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO7112 SC4B10.13c; ECF family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO5934 SC7H1.04; sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO3450 SCE46.07c; ECF subfamily RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO3709 SCH35.15; ECF sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO1723 SCI11.12c; RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO3892 SCH24.14c; RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO2954 SCE59.13c; RNA polymerase sigma factor SigL K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO4938 SCK13.30; ECF-sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO3323 SCE68.21; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO4866 SCK20.07; ECF sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO2639 SC8E4A.09c; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO3736 SCH22A.14c; RNA polymerase ECF sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO7099 SC3A4.25c; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCP1.116 ecf family sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO7104 SC4B10.05; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO4146 SCD84.13; ECF family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO4409 SC6F11.07c; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO7105 SC4B10.06c; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO0803 SCF43.14c; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO0632 SCF56.16; RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO1263 2SCG18.10c; ECF-sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO0942 SCM10.30; RNA polymerase sigma factor SigL K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO0864 SCM2.17c; ECF family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO0866 SCM2.19c; ECF family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO5147 SCP8.10; RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO0194 SCJ12.06; sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO6239 SCAH10.04c; sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO2742 SCC57A.13c; sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO3626 SCH10.04c; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO4864 SCK20.05; ECF sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCO0600 SCF55.24; RNA polymerase sigma factor sig8 K03090 sigB; RNA polymerase sigma-B factor
E SCO5243 2SC7G11.05c; RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
E SCO6520 SC5C7.05; RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
E SCO7314 SC5F8.24; RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
E SCO4035 2SCD60.01c; RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
E SCO4034 2SC10A7.38c; RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
E SCO7278 SC5H1.14; RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
E SCO7341 SC4G10.20c; RNA polymerase secondary sigma factor K03090 sigB; RNA polymerase sigma-B factor
E SCO3068 SCE25.09; RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
E SCO5621 SC2E1.38; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E SCO5704 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E SCO1490 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
E SCO4647 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
E SCO7322 SC4G10.01c; anti-sigma factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E SCO7323 SC4G10.02c; anti-sigma factor antagonist K17762 rsbS; rsbT antagonist protein RsbS
E SCO7324 SC4G10.03c; regulatory protein K17763 rsbR; rsbT co-antagonist protein RsbR
E SCO3691 SCH35.33c; regulatory protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E SCO3690 SCH35.34c; hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ
E SCO3549 bldG; anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E SCO5244 2SC7G11.06c; anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
E SCO2075 SC4A10.08c; DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
E SCO4965 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E SCO7051 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
E SCO5357 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024