+D GENES KO
#
KEGG Orthology (KO) - Shigella flexneri 2457T (serotype 2a)
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:sfx00010]
D S2593 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D S3551 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D S3753 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D S1624 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D S4520 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D S3744 glpX; hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D S3121 yggF; hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D S2285 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D S3110 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D S3750 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D S1559 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D S3111 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D S0557 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D S4698 gpmB; phosphoglyceromutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D S4117 yibO; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D S2988 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D S1930 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D S1838 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D S1646 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D S0113 aceE; pyruvate dehydrogenase (decarboxylase component) K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D S0114 aceF; pyruvate dehydrogenase (dihydrolipoyltransacetylase component) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D S0115 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D S1451 ydbK; putative oxidoreductase, Fe-S subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D S1326 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D S1880 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D S4141 yiaY; putative oxidoreductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D S4486 yjgB; putative oxidoreductase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D S4142 aldB; aldehyde dehydrogenase B (lactaldehyde dehydrogenase) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D S0556 galM; galactose-1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D S3795 yihR; putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D S2763 yphB; hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D S1075 agp; periplasmic glucose-1-phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D S3789 yihX; putative phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D S0616 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D S1558 yeaD; hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D S4341 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D S1611 celF; cryptic phospho-beta-glucosidase; cryptic K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D S3086 bglA; 6-phospho-beta-glucosidase A K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D S4038 bglB; phospho-beta-glucosidase B cryptic K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D S2618 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D S1185 ptsG; glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D S1778 malX; phosphotransferase system enzyme II K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 00020 Citrate cycle (TCA cycle) [PATH:sfx00020]
D S0590 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D S1363 acnA; aconitate hydrase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D S0939 ybhJ; putative enzyme K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D S0117 acnB; aconitate hydrase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D S1238 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D S0584 sucA; 2-oxoglutarate dehydrogenase (decarboxylase component) K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D S0583 sucB; 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D S0115 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D S0581 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D S0582 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D S0587 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D S0586 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D S0589 sdhC; succinate dehydrogenase, cytochrome b556 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D S0588 sdhD; succinate dehydrogenase, hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D S4577 frdA; fumarate reductase, anaerobic, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D S4576 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D S4575 frdC; fumarate reductase, anaerobic, membrane anchor polypeptide K00246 frdC; succinate dehydrogenase subunit C
D S4574 frdD; fumarate reductase, anaerobic, membrane anchor polypeptide K00247 frdD; succinate dehydrogenase subunit D
D S1766 fumA; fumarase A, fumarate hydratase Class I; aerobic isozyme K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D S3629 fumB; fumarase B, fumarate hydratase Class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D S1765 fumC; fumarase C, fumarate hydratase Class II; isozyme K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D S1835 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D S3120 yggD; putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2]
D S3491 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D S4341 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D S0113 aceE; pyruvate dehydrogenase (decarboxylase component) K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D S0114 aceF; pyruvate dehydrogenase (dihydrolipoyltransacetylase component) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D S1451 ydbK; putative oxidoreductase, Fe-S subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:sfx00030]
D S3551 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D S1928 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D S0935 ybhE; putative isomerase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D S2212 gnd; gluconate-6-phosphate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D S4358 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D S3127 tktA; transketolase 1 isozyme K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D S2658 tktB; transketolase 2 isozyme K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D S0008 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D S2657 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2]
D S3099 rpiA; ribosephosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D S4684 deoC; 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D S3932 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D S4686 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D S4364 yhfW; putative mutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D S0616 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D S1294 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D S1927 edd; 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D S1926 eda; 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D S0123 gcd; glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D S4182 yiaE; putative dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D S4303 gntK; gluconokinase 2 K00851 idnK; gluconokinase [EC:2.7.1.12]
D S4209 kdgK; ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D S2285 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D S3110 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D S4520 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D S3744 glpX; hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D S3121 yggF; hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D S3753 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D S1624 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:sfx00040]
D S0940 ybhC; putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D S3051 kduI; putative pectin degrading enzyme 5-keto 4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D S3050 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D S3339 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D S1699 uxaB; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D S3338 uxaA; altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D S4454 uxuA; mannonate hydrolase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D S1718 rspA; starvation sensing protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D S3707 putative sensor protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D S4453 uxuB; D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D S1678 ydfI; putative oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D S1771 uidA; beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D S1322 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D S2228 galF; UTP--glucose-1-P uridyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D S4150 yiaK; putative dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D S4621 sgaH; probable hexulose-6-phosphate synthase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D S4622 sgaU; putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D S4623 sgaE; putative epimerase/aldolase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D S0058 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D S4358 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D S0059 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D S0060 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D S4161 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D S3767 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D S3769 rhaD; rhamnulose-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D S3011 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D S3009 fucA; L-fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:sfx00051]
D S0338 yajF; possible NAGC-like transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D S1767 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D S2234 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D S2235 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D S2239 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D S2238 wcaG; putative nucleotide di-P-sugar epimerase or dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D S3011 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D S3009 fucA; L-fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D S2460 hypothetical protein K12660 rhmA; 2-dehydro-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53]
D S3768 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D S3767 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D S3769 rhaD; rhamnulose-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D S3753 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D S1624 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D S4520 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D S3744 glpX; hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D S3121 yggF; hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D S4134 mtlD; mannitol-1-phosphate dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D S2919 srlD; glucitol (sorbitol)-6-phosphate dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D S3637 sorD; putative sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D S3122 putative oxidoreductase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D S3642 sorE; putative L-sorbose-1-P-reductase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D S2382 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D S2285 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D S3110 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D S3750 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D S2381 fruA; PTS system, fructose-specific transport protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D S1526 manX; PTS enzyme IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D S1525 manY; PTS enzyme IIC K02795 manY; mannose PTS system EIIC component
D S1524 manZ; PTS enzyme IID K02796 manZ; mannose PTS system EIID component
D S4135 mtlA; PTS system, mannitol-specific enzyme IIABC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D S2504 yfbT; putative phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D S1620 yniC; putative phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
D S2918 srlB; PTS system, glucitol/sorbitol-specific enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D S2917 srlE; PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D S3638 sorF; putative sorbose-permease PTS system IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D S3639 sorB; putative sorbose-permease PTS system IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D S3640 sorA; putative sorbose-permease PTS system IIC component K02814 sorA; sorbose PTS system EIIC component
D S3641 sorM; putative sorbose-permease PTS system IID component K02815 sorM; sorbose PTS system EIID component
C 00052 Galactose metabolism [PATH:sfx00052]
D S0556 galM; galactose-1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D S3795 yihR; putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D S2763 yphB; hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D S0555 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D S0554 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D S0553 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D S1322 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D S2228 galF; UTP--glucose-1-P uridyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D S0616 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D S2593 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D S3323 ebgA; evolved beta-D-galactosidase, alpha subunit K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D S3324 ebgC; evolved beta-D-galactosidase, beta subunit K12112 ebgC; evolved beta-galactosidase subunit beta
D S3626 melA; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D S2282 gatA; galactitol-specific enzyme IIA of phosphotransferase system K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D S2281 gatB; galactitol-specific enzyme IIB of phosphotransferase system K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D S2280 gatC; PTS system galactitol-specific enzyme IIC K02775 gatC; galactitol PTS system EIIC component
D S2277 gatD; galactitol-1-phosphate dehydrogenase K00094 E1.1.1.251; galactitol-1-phosphate 5-dehydrogenase [EC:1.1.1.251]
D S3753 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D S1624 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D S2284 gatY; tagatose-bisphosphate aldolase 1 K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D S3382 agaZ; putative tagatose 6-phosphate kinase 2 K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D S2283 gatZ; putative tagatose 6-phosphate kinase 1 K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D S4000 dgoK; 2-oxo-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D S2470 putative membrane protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D S0348 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D S3386 agaF; putative transport enzyme subunit K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D S3383 agaV; cytoplasmic transport protein N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D S3384 agaW; N-acetylgalactosameine-specific IIC component 2 K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D S3385 agaE; putative transport enzyme subunit K02747 agaE; N-acetylgalactosamine PTS system EIID component
D S3387 agaA; N-acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.25]
D S3391 agaC; N-acetylgalactosamine-specific transport IIC component 1 K10985 agaC; galactosamine PTS system EIIC component
D S3392 agaD; N-acetylglucosamine transport enzyme IID component 1 K10986 agaD; galactosamine PTS system EIID component
C 00053 Ascorbate and aldarate metabolism [PATH:sfx00053]
D S1771 uidA; beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D S4620 ptxA; putative PTS system enzyme II A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D S4619 sgaB; hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D S4618 sgaT; hypothetical protein K03475 ulaA; ascorbate PTS system EIIC component
D S4617 yjfR; hypothetical protein K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D S4621 sgaH; probable hexulose-6-phosphate synthase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D S4622 sgaU; putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D S4623 sgaE; putative epimerase/aldolase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D S0058 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D S4150 yiaK; putative dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D S2994 ygcX; putative glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D S3380 yhaG; putative hydrolase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:sfx00500]
D S2470 putative membrane protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D S0348 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D S1322 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D S2228 galF; UTP--glucose-1-P uridyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D S2346 bglX; beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D S1607 celC; PEP-dependent phosphotransferase enzyme III for cellobiose, arbutin, and salicin K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D S1605 celA; PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D S1611 celF; cryptic phospho-beta-glucosidase; cryptic K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D S3086 bglA; 6-phospho-beta-glucosidase A K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D S4038 bglB; phospho-beta-glucosidase B cryptic K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D S4310 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D S4311 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D S4308 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D S4312 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D S4325 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D S4309 glgX; glycosyl hydrolase, debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D S4154 malS; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D S2066 amyA; cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D S4326 malQ; 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D S1406 ycjU; putative beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D S2618 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D S1778 malX; phosphotransferase system enzyme II K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D S2036 otsB; trehalose-6-phosphate phophatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D S4217 treF; cytoplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D S1284 treA; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D S4512 treB; PTS system enzyme II K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D S4513 treC; trehalase 6-P hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D S0616 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D S2593 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D S3551 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D S0338 yajF; possible NAGC-like transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sfx00520]
D S1191 ycfO; hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D S2618 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D S0625 nagE; N-acetylglucosamine-specific enzyme IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D S1203 ycfX; putative NAGC-like transcriptional regulator K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D S0627 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D S0626 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D S0338 yajF; possible NAGC-like transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D S3959 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D S3434 mrsA; putative phosphoglucomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D S2704 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D S3958 glmU; N-acetyl glucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D S2630 putative PTS enzyme II K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D S2629 yfeU; putative regulator K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D S1799 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D S3447 murA; UDP-N-glucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D S3690 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D S3475 yhcI; putative NAGC-like transcriptional regulator K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D S3476 yhcJ; putative enzyme K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D S3478 nanA; N-acetylneuraminate lyase (aldolase) K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D S3900 wecB; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D S3899 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D S2467 ybfG; putative transformylase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D S2465 putative enzyme K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D S2466 putative sugar transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D S2468 hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D S1185 ptsG; glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D S1778 malX; phosphotransferase system enzyme II K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D S2593 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D S0616 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D S1322 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D S2228 galF; UTP--glucose-1-P uridyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D S0555 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D S0554 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D S0553 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D S1526 manX; PTS enzyme IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D S1525 manY; PTS enzyme IIC K02795 manY; mannose PTS system EIIC component
D S1524 manZ; PTS enzyme IID K02796 manZ; mannose PTS system EIID component
D S3551 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D S1767 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D S2234 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D S2235 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D S2239 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D S2238 wcaG; putative nucleotide di-P-sugar epimerase or dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D S4310 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:sfx00620]
D S1451 ydbK; putative oxidoreductase, Fe-S subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D S0113 aceE; pyruvate dehydrogenase (decarboxylase component) K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D S0114 aceF; pyruvate dehydrogenase (dihydrolipoyltransacetylase component) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D S0115 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D S0962 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D S3366 tdcE; probable formate acetyltransferase 3 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D S1326 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D S1880 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D S4141 yiaY; putative oxidoreductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D S4486 yjgB; putative oxidoreductase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D S2507 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D S2508 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D S1930 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D S1838 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D S0178 accA; acetyl CoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D S3510 accB; acetyl CoA carboxylase, carrier of biotin, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D S3511 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D S2527 accD; acetyl CoA carboxylase, carboxytransferase component, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D S1036 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D S4142 aldB; aldehyde dehydrogenase B (lactaldehyde dehydrogenase) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D S4124 lldD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D S0867 poxB; pyruvate oxidase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D S1459 ldhA; fermentative D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D S2347 dld; D-lactate dehydrogenase, FAD protein K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D S1475 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D S1810 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D S0206 gloB; probable hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D S0988 ycbL; hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D S2111 yedU; hypothetical protein K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D S4182 yiaE; putative dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D S1879 sfcA; NAD-linked malate dehydrogenase (malic enzyme) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D S2656 putative multimodular enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D S3491 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D S1766 fumA; fumarase A, fumarate hydratase Class I; aerobic isozyme K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D S3629 fumB; fumarase B, fumarate hydratase Class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D S1765 fumC; fumarase C, fumarate hydratase Class II; isozyme K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D S1835 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D S3120 yggD; putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2]
D S4577 frdA; fumarate reductase, anaerobic, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D S4576 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D S4575 frdC; fumarate reductase, anaerobic, membrane anchor polypeptide K00246 frdC; succinate dehydrogenase subunit C
D S4574 frdD; fumarate reductase, anaerobic, membrane anchor polypeptide K00247 frdD; succinate dehydrogenase subunit D
D S3713 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D S4341 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D S1646 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D S3216 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D S3052 yqeF; putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D S0071 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sfx00630]
D S3649 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D S3216 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D S3491 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D S0590 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D S1363 acnA; aconitate hydrase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D S0939 ybhJ; putative enzyme K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D S0117 acnB; aconitate hydrase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D S3052 yqeF; putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D S3102 sbm; methylmalonyl-CoA mutase (MCM) K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D S1613 katE; catalase; hydroperoxidase HPII(III) K03781 katE; catalase [EC:1.11.1.6]
D S4182 yiaE; putative dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D S4359 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D S3806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D S2770 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D S3088 gcvP; glycine decarboxylase, P protein of glycine cleavage system K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D S3090 gcvT; aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D S0115 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D S3089 gcvH; carrier of aminomethyl moiety via covalently bound lipoyl cofactor in glycine cleavage complex K02437 gcvH; glycine cleavage system H protein
D S0453 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D S0454 gip; glyoxylate-induced protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D S3377 yhaE; putative dehydrogenase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D S3376 yhaD; hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D S1475 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D S3008 fucO; L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D S3307 ttdA; L-tartrate dehydratase, subunit A K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32]
D S3308 ttdB; L-tartrate dehydratase, subunit B K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32]
D S1926 eda; 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D S3778 fdoG; formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D S3779 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D S3780 fdoI; formate dehydrogenase, cytochrome B556 (FDO) subunit K00127 fdoI; formate dehydrogenase subunit gamma
D S1318 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D S2577 putative enzyme K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8]
C 00640 Propanoate metabolism [PATH:sfx00640]
D S2507 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D S3367 tdcD; putative kinase K00932 tdcD; propionate kinase [EC:2.7.2.15]
D S2508 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D S0115 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D S0962 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D S3366 tdcE; probable formate acetyltransferase 3 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D S3508 yhdH; putative dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D S3830 fadB; 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D S2554 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D S0178 accA; acetyl CoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D S3510 accB; acetyl CoA carboxylase, carrier of biotin, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D S3511 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D S2527 accD; acetyl CoA carboxylase, carboxytransferase component, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D S1389 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D S2874 gabT; GABA transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D S3104 ygfG; putative enzyme K11264 scpB; methylmalonyl-CoA decarboxylase [EC:4.1.1.-]
D S3102 sbm; methylmalonyl-CoA mutase (MCM) K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D S0582 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D S0581 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D S0117 acnB; aconitate hydrase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D S1031 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D S3258 yqhD; putative oxidoreductase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D S1567 hypothetical protein K18471 ydjG; methylglyoxal reductase [EC:1.1.1.-]
D S3008 fucO; L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00650 Butanoate metabolism [PATH:sfx00650]
D S3052 yqeF; putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D S3830 fadB; 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D S2554 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D S1326 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D S0587 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D S0586 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D S0589 sdhC; succinate dehydrogenase, cytochrome b556 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D S0588 sdhD; succinate dehydrogenase, hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D S4577 frdA; fumarate reductase, anaerobic, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D S4576 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D S4575 frdC; fumarate reductase, anaerobic, membrane anchor polypeptide K00246 frdC; succinate dehydrogenase subunit C
D S4574 frdD; fumarate reductase, anaerobic, membrane anchor polypeptide K00247 frdD; succinate dehydrogenase subunit D
D S4173 gadA; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S1867 gadB; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S2648 hypothetical protein K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S1389 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D S2874 gabT; GABA transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D S3792 yihU; putative dehydrogenase K08318 yihU; 4-hydroxybutyrate dehydrogenase / sulfolactaldehyde 3-reductase [EC:1.1.1.61 1.1.1.373]
D S0962 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D S3366 tdcE; probable formate acetyltransferase 3 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D S1451 ydbK; putative oxidoreductase, Fe-S subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D S0074 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S3917 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S3978 ilvB; acetolactate synthase I, valine-sensitive, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S0075 ilvH; acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D S3977 ilvN; acetolactate synthase I, valine sensitive, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D S3915 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:sfx00660]
D S0074 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S3917 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S3978 ilvB; acetolactate synthase I, valine-sensitive, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S0075 ilvH; acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D S3977 ilvN; acetolactate synthase I, valine sensitive, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D S3915 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D S0582 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D S0581 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D S0069 leuC; 3-isopropylmalate isomerase (dehydratase) subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D S0068 leuD; isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D S0070 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:sfx00562]
D S2752 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D S1048 appA; phosphoanhydride phosphorylase; pH 2.5 acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D S3750 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:sfx00190]
D S2499 nuoA; NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D S2498 nuoB; NADH dehydrogenase I chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D S2497 nuoC; NADH dehydrogenase I chain C, D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D S2496 nuoE; NADH dehydrogenase I chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D S2495 nuoF; NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D S2494 nuoG; NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D S2493 nuoH; NADH dehydrogenase I chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D S2492 nuoI; NADH dehydrogenase I chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D S2491 nuoJ; NADH dehydrogenase I chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D S2490 nuoK; NADH dehydrogenase I chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D S2489 nuoL; NADH dehydrogenase I chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D S2488 nuoM; NADH dehydrogenase I chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D S2487 nuoN; NADH dehydrogenase I chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D S1193 ndh; respiratory NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D S0587 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D S0586 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D S0589 sdhC; succinate dehydrogenase, cytochrome b556 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D S0588 sdhD; succinate dehydrogenase, hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D S4577 frdA; fumarate reductase, anaerobic, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D S4576 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D S4575 frdC; fumarate reductase, anaerobic, membrane anchor polypeptide K00246 frdC; succinate dehydrogenase subunit C
D S4574 frdD; fumarate reductase, anaerobic, membrane anchor polypeptide K00247 frdD; succinate dehydrogenase subunit D
D S0374 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D S0375 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D S0376 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D S0577 cydA; cytochrome d terminal oxidase, polypeptide subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D S1046 appC; probable third cytochrome oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D S0576 cydB; cytochrome d terminal oxidase polypeptide subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D S1047 appB; probable third cytochrome oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D S3954 atpA; membrane-bound ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D S3956 atpD; membrane-bound ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D S3955 atpG; membrane-bound ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D S3953 atpH; membrane-bound ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D S3957 atpC; membrane-bound ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D S3950 atpB; membrane-bound ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D S3952 atpF; membrane-bound ATP synthase, F0 sector, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D S3951 atpE; membrane-bound ATP synthase, F0 sector, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D S4527 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D S2694 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:sfx00680]
D S3778 fdoG; formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D S3779 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D S3780 fdoI; formate dehydrogenase, cytochrome B556 (FDO) subunit K00127 fdoI; formate dehydrogenase subunit gamma
D S2770 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D S2988 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D S3713 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D S3491 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D S2285 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D S3110 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D S4520 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D S3744 glpX; hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D S3121 yggF; hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D S3753 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D S1624 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D S1066 torC; trimethylamine N-oxide reductase, cytochrome c-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D S2004 yecK; putative cytochrome C-type protein K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D S2003 bisZ; biotin sulfoxide reductase 2 K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D S2507 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D S2508 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D S1646 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D S0557 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D S4698 gpmB; phosphoglyceromutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D S4117 yibO; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D S3098 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D S0966 serC; 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D S4691 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:sfx00910]
D S1310 narK; nitrate transport protein nark K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D S1892 narU; nitrite extrusion protein 2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D S1311 narG; nitrate reductase 1 alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D S1312 narH; nitrate reductase 1, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D S1314 narI; nitrate reductase 1, cytochrome b(NR), gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D S2420 napA; probable nitrate reductase 3 K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D S2417 napB; cytochrome c-type protein K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D S4379 nirB; nitrite reductase (NAD(P)H) subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D S4378 nirD; nitrite reductase (NAD(P)H) subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D S3597 nrfA; periplasmic cytochrome c(552) K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D S0869 ybjW; putative prismane HCP protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D S3806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D S3470 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D S3471 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D S0460 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D S0125 yadF; putative carbonic anhdrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:sfx00920]
D S2626 cysP; thiosulfate binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D S3752 sbp; periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D S2625 cysU; sulfate, thiosulfate transport system permease T protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D S2624 cysW; sulfate transport system permease W protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D S2623 cysA; ATP-binding component of sulfate permease A protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D S0274 tauA; taurine transport system periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D S0272 tauC; taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D S0273 tauB; taurine ATP-binding component of a transport system K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D S0271 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D S1000 ycbO; hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D S0994 ycbE; putative ATP-binding component of a transport system K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D S0999 ycbN; hypothetical protein K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D S1001 ycbP; hypothetical protein K00299 ssuE; FMN reductase [EC:1.5.1.38]
D S2967 cysN; ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D S2968 cysD; ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D S2966 cysC; adenosine 5-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D S4537 cysQ; ammonium transport system structural protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D S2971 cysH; 3-phosphoadenosine 5-phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D S2973 cysJ; sulfite reductase (NADPH), flavoprotein beta subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D S2972 cysI; sulfite reductase, alpha subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D S1830 ydhU; hypothetical protein K08354 phsC; thiosulfate reductase cytochrome b subunit
D S4317 glpE; protein of glp regulon K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D S4122 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D S2615 cysK; cysteine synthase A, O-acetylserine sulfhydrolase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D S3651 metA; homoserine transsuccinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D S3730 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D S0894 dmsA; anaerobic dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D S0895 dmsB; anaerobic dimethyl sulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D S0896 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:sfx00061]
D S0178 accA; acetyl CoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D S3510 accB; acetyl CoA carboxylase, carrier of biotin, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D S3511 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D S2527 accD; acetyl CoA carboxylase, carboxytransferase component, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D S1178 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D S3224 hypothetical protein K02078 acpP; acyl carrier protein
D S1176 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D S1175 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III; acetyl CoA ACP transacylase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D S2534 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D S1179 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D S1177 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D S1020 fabA; beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D S0173 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D S1375 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D S1538 fadD; acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:sfx00071]
D S3052 yqeF; putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D S3831 fadA; thiolase I, 3-ketoacyl-CoA thiolase, acetyl-CoA transferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D S2555 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D S3830 fadB; 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D S2554 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D S0292 yafH; putative acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D S1538 fadD; acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D S3044 aas; 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D S1326 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D S1880 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D S4141 yiaY; putative oxidoreductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:sfx00561]
D S3376 yhaD; hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D S1287 putative dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D S1286 putative dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D S1285 ycgC; putative PTS system enzyme I K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D S3743 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D S3567 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D S1174 plsX; PlsX protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D S3305 ygiH; hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D S3266 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D S3568 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D S3626 melA; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:sfx00564]
D S4121 gpsA; glycerol-3-phosphate dehydrogenase (NAD+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D S4316 glpD; sn-glycerol-3-phosphate dehydrogenase (aerobic) K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D S2456 glpA; sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D S2457 glpB; sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D S2458 glpC; sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D S3567 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D S3305 ygiH; hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D S3266 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D S3568 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D S3856 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D S3852 pldB; lysophospholipase L(2) K01048 pldB; lysophospholipase [EC:3.1.1.5]
D S4296 ugpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D S2454 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D S3044 aas; 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D S3751 cdh; CDP-diacylglycerol phosphotidylhydrolase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D S0168 cdsA; CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D S1465 putative phosphatidate cytidiltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D S2820 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D S4582 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D S2051 pgsA; phosphatidylglycerophosphate synthetase, CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D S0363 pgpA; phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D S1365 pgpB; non-essential phosphatidylglycerophosphate phosphatase K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D S2779 yfhB; hypothetical protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D S1336 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D S0780 ybhO; putative synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D S1116 ymdC; putative synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:sfx00565]
D S3856 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:sfx00600]
D S3626 melA; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D S3856 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D S3856 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:sfx00592]
D S3856 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D S3831 fadA; thiolase I, 3-ketoacyl-CoA thiolase, acetyl-CoA transferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D S2555 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:sfx01040]
D S0403 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D S1342 yciA; hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:sfx00230]
D S3279 yqiE; hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D S4347 yrfE; hypothetical protein K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D S4686 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D S4364 yhfW; putative mutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D S0616 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D S1294 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D S2523 purF; amidophosphoribosyltransferase, PRPP amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D S3658 purD; phosphoribosylglycinamide synthetase, GAR synthetase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D S2693 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D S1925 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D S2776 purL; phosphoribosylformyl-glycineamide synthetase, FGAM synthetase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D S2692 purM; phosphoribosylaminoimidazole synthetase, AIR synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D S0461 purK; phosphoribosylaminoimidazole carboxylase; AIR carboxylase, CO(2)-fixing subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D S0462 purE; phosphoribosylaminoimidazole carboxylase; AIR carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D S2669 purC; phosphoribosylaminoimidazole-succinocarboxamide synthetase, SAICAR synthetase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D S1233 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D S3657 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase, AICAR formyltransferase; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D S0421 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D S0432 ushA; UDP-sugar hydrolase (5-nucleotidase) K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D S2960 surE; survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D S4345 yrfG; putative phosphatase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D S0429 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D S4687 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D S0335 yaiE; hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D S2830 yfiH; hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D S0124 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D S2726 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D S2736 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D S3149 yggV; putative ribosomal protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D S0307 gpt; guanine-hypoxanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D S3068 hypothetical protein K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D S3069 ygeT; putative dehydrogenase K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D S3070 putative dehydrogenase K13480 ygeU; xanthine dehydrogenase iron-sulfur-binding subunit
D S2725 guaA; GMP synthetase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D S0103 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D S4081 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D S2449 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit, B1 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D S2889 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D S2450 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit, B2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D S2890 nrdF; ribonucleoside-diphosphate reductase 2, beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D S4514 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D S0155 dgt; deoxyguanosine triphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D S2015 hypothetical protein K01129 dgt; dGTPase [EC:3.1.5.1]
D S2502 putative alpha helix protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D S4079 spoT; (p)ppGpp synthetase II and guanosine-3,5-bis pyrophosphate 3-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D S3907 gppA; guanosine pentaphosphatase, exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D S2695 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D S2991 relA; (p)ppGpp synthetase I (GTP pyrophosphokinase) K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D S3878 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D S4600 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D S1780 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D S2160 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D S3003 ygdH; hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D S3972 yicP; probable adenine deaminase (synthesis xanthine) K01486 ade; adenine deaminase [EC:3.5.4.2]
D S4538 cpdB; 2:3-cyclic-nucleotide 2-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D S0426 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D S2990 mazG; hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D S3277 icc; regulator of lacZ K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D S0048 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D S2966 cysC; adenosine 5-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D S2967 cysN; ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D S2968 cysD; ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D S2114 hypothetical protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D S0458 ylbB; putative hydantoin utilization protein K02083 allC; allantoate deiminase [EC:3.5.3.9]
D S0457 ylbA; hypothetical protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D S0451 ybbT; hypothetical protein K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D S0460 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:sfx00240]
D S0032 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D S0031 carA; carbamoyl-phosphate synthetase, glutamine (small) subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D S4507 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D S4508 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D S1146 pyrC; dihydro-orotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D S1011 pyrD; dihydro-orotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D S4087 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D S1368 pyrF; orotidine-5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D S0164 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D S2736 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D S2990 mazG; hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D S3503 yhdE; hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D S3332 ygjP; hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D S2989 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D S0970 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D S1581 hypothetical protein K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D S2254 udk; uridine/cytidine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D S0432 ushA; UDP-sugar hydrolase (5-nucleotidase) K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D S2960 surE; survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D S4677 yjjG; putative phosphatase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D S3845 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D S0335 yaiE; hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D S2691 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D S4538 cpdB; 2:3-cyclic-nucleotide 2-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D S2380 yeiC; putative kinase K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
D S2379 yeiN; hypothetical protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D S2376 yeiK; hypothetical protein K10213 rihB; ribosylpyrimidine nucleosidase [EC:3.2.2.8]
D S0652 ybeK; putative tRNA synthetase K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-]
D S0029 yaaF; hypothetical protein K12700 rihC; non-specific riboncleoside hydrolase [EC:3.2.2.-]
D S3003 ygdH; hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D S2357 cdd; cytidine/deoxycytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D S4514 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D S2253 dcd; 2-deoxycytidine 5-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D S2449 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit, B1 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D S2889 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D S2450 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit, B2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D S2890 nrdF; ribonucleoside-diphosphate reductase 2, beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D S2502 putative alpha helix protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D S1182 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D S4089 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D S4685 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D S1324 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D S3035 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D S2360 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D S1085 hypothetical protein K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46]
D S1080 hypothetical protein K09024 rutF; flavin reductase [EC:1.5.1.-]
D S1084 putative synthetase K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]
D S1083 hypothetical protein K09021 rutC; aminoacrylate peracid reductase
D S1082 putative acetyltransferase K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-]
D S1681 ydfG; putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D S1081 putative enzyme K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:sfx00250]
D S0989 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D S1571 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D S3157 ansB; periplasmic L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D S0821 ybiK; putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D S3944 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D S0630 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D S0290 yafV; putative amidase-type enzyme K13566 NIT2; omega-amidase [EC:3.5.1.3]
D S2501 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D S4560 aspA; aspartate ammonia-lyase (aspartase) K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D S3430 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D S3709 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D S4600 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D S1233 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D S4507 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D S4508 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D S4173 gadA; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S1867 gadB; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S2648 hypothetical protein K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S1389 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D S2874 gabT; GABA transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D S3470 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D S3471 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D S3806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D S0032 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D S0031 carA; carbamoyl-phosphate synthetase, glutamine (small) subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D S0437 ybaS; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D S1696 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D S3959 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D S2523 purF; amidophosphoribosyltransferase, PRPP amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:sfx00260]
D S3550 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D S0002 thrA; aspartokinase I, homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D S3729 metL; aspartokinase II and homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D S4307 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D S0003 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D S0004 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D S0866 ybjU; putative arylsulfatase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D S2770 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D S4182 yiaE; putative dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D S3376 yhaD; hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D S0557 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D S4698 gpmB; phosphoglyceromutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D S4117 yibO; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D S3098 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D S0966 serC; 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D S4691 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D S1681 ydfG; putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D S4110 kbl; 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D S4111 tdh; threonine dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D S3088 gcvP; glycine decarboxylase, P protein of glycine cleavage system K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D S3090 gcvT; aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D S0115 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D S3089 gcvH; carrier of aminomethyl moiety via covalently bound lipoyl cofactor in glycine cleavage complex K02437 gcvH; glycine cleavage system H protein
D S2820 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D S1529 sdaA; L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D S3363 putative L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D S3006 sdaB; L-serine dehydratase (deaminase), L-SD2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D S3369 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D S3912 ilvA; threonine deaminase (dehydratase) K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D S2570 dsdA; D-serine dehydratase (deaminase) K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D S3048 ygeA; putative resistance proteins K25316 racX; amino-acid racemase [EC:5.1.1.10]
D S1349 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D S1350 trpB; tryptophan synthase, beta protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:sfx00270]
D S4122 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D S2615 cysK; cysteine synthase A, O-acetylserine sulfhydrolase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D S3256 metC; cystathionine beta-lyase (beta-cystathionase) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D S1779 malY; cystathionine beta-lyase; maltose regulon modulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D S3645 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D S3848 metE; tetrahydropteroyltriglutamate methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D S3137 metK; methionine adenosyltransferase 1 (AdoMet synthetase) K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D S0119 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D S0120 speE; spermidine synthase, putrescine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D S0154 pfs; hypothetical protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D S2830 yfiH; hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D S3579 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D S1509 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D S2100 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D S2901 ygaG; hypothetical protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D S3550 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D S0002 thrA; aspartokinase I, homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D S3729 metL; aspartokinase II and homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D S4307 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D S3651 metA; homoserine transsuccinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D S3730 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D S3914 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D S2902 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D S3142 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D S0989 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D S3048 ygeA; putative resistance proteins K25316 racX; amino-acid racemase [EC:5.1.1.10]
D S2058 yedO; putative 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D S3491 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D S1529 sdaA; L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D S3363 putative L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D S3006 sdaB; L-serine dehydratase (deaminase), L-SD2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D S2622 cysM; cysteine synthase B, O-acetylserine sulfhydrolase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D S3098 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D S0966 serC; 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:sfx00280]
D S3914 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D S0115 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D S3830 fadB; 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D S2554 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D S3831 fadA; thiolase I, 3-ketoacyl-CoA thiolase, acetyl-CoA transferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D S2555 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D S3102 sbm; methylmalonyl-CoA mutase (MCM) K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D S2874 gabT; GABA transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D S3052 yqeF; putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sfx00290]
D S3369 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D S3912 ilvA; threonine deaminase (dehydratase) K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D S0069 leuC; 3-isopropylmalate isomerase (dehydratase) subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D S0068 leuD; isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D S0070 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D S0074 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S3917 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S3978 ilvB; acetolactate synthase I, valine-sensitive, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S0075 ilvH; acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D S3977 ilvN; acetolactate synthase I, valine sensitive, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D S3915 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D S3910 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D S3913 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D S3914 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D S4153 avtA; alanine-alpha-ketoisovalerate/valine-pyruvate transaminase C K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D S2501 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D S0071 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:sfx00300]
D S3550 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D S0002 thrA; aspartokinase I, homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D S3729 metL; aspartokinase II and homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D S4307 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D S2671 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D S0030 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D S0159 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D S4385 argD; acetylornithine delta-aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D S2665 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D S3869 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D S3046 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D S0084 murE; meso-diaminopimelate-adding enzyme K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D S0085 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:sfx00310]
D S0583 sucB; 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D S0115 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D S3830 fadB; 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D S2554 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D S3052 yqeF; putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D S3048 ygeA; putative resistance proteins K25316 racX; amino-acid racemase [EC:5.1.1.10]
D S0179 ldcC; lysine decarboxylase 2 K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D S3320 ygjG; probable ornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D S1905 putative aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D S2874 gabT; GABA transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D S2871 hypothetical protein K15737 csiD; glutarate dioxygenase [EC:1.14.11.64]
D S2872 ygaF; hypothetical protein K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D S1487 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D S1849 ydiJ; putative oxidase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:sfx00220]
D S4496 argI; ornithine carbamoyltransferase 1 K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D S3430 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D S3709 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D S0437 ybaS; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D S1696 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D S3806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D S0460 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D S0989 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D S2501 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D S3026 argA; N-acetylglutamate synthase; amino acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D S3710 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D S3711 argC; N-acetyl-gamma-glutamylphosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D S4385 argD; acetylornithine delta-aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D S3712 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:sfx00330]
D S3624 adiA; biodegradative arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D S3133 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D S3129 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D S3165 speC; ornithine decarboxylase isozyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D S0120 speE; spermidine synthase, putrescine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D S0119 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D S3320 ygjG; probable ornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D S1905 putative aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D S1596 hypothetical protein K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D S1597 putative aldehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D S1599 ydjS; hypothetical protein K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D S1384 putative glutamine synthetase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11]
D S1388 ordL; probable oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D S1387 aldH; aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D S1385 ycjL; probable amidotransferase subunit K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
D S0330 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D S0313 proB; gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D S0314 proA; gamma-glutamylphosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D S0989 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:sfx00340]
D S2202 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D S2209 hisI; phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D S2207 hisA; N-(5-phospho-L-ribosyl-formimino)-5-amino-1-(5-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D S2206 hisH; glutamine amidotransferase subunit of heterodimer with HisF, imidazole glycerol phosphate synthase holoenzyme K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D S2208 hisF; imidazole glycerol phosphate synthase subunit in heterodimer with HisH, imidazole glycerol phsphate synthase holoenzyme K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D S2205 hisB; imidazole glycerol phosphate dehydratase and histidinol-phosphate phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D S2204 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D S2203 hisD; oxidoreductase for L-histidinal:NAD+ and L-histidinol:NAD+ K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:sfx00350]
D S0989 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D S2204 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D S3579 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D S1326 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D S1880 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D S4141 yiaY; putative oxidoreductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D S4643 hpaC; component C of the 4HPA-hydroxylase K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D S4652 hpaD; homoprotocatechuate dyoxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D S4653 hpaE; 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D S4651 hpaF; 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D S4654 hpaG; 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D S4650 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D S4649 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D S0792 ybiC; putative dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
C 00360 Phenylalanine metabolism [PATH:sfx00360]
D S0989 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D S2204 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D S3579 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D S4299 yhhY; hypothetical protein K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D S1266 dadA; D-amino acid dehydrogenase subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D S0792 ybiC; putative dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
D S3727 katG; catalase; hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D S2757 hcaA1; large terminal subunit of phenylpropionate dioxygenase K05708 hcaE; 3-phenylpropionate/trans-cinnamate dioxygenase subunit alpha [EC:1.14.12.19]
D S2758 hcaA2; small terminal subunit of phenylpropionate dioxygenase K05709 hcaF; 3-phenylpropionate/trans-cinnamate dioxygenase subunit beta [EC:1.14.12.19]
D S2759 hcaC; ferredoxin subunit of phenylpropionate dioxygenase K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D S2760 hcaB; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase K05711 hcaB; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase [EC:1.3.1.87]
C 00380 Tryptophan metabolism [PATH:sfx00380]
D S0583 sucB; 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D S0115 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D S3830 fadB; 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D S2554 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D S3052 yqeF; putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D S4017 tnaA; tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D S1613 katE; catalase; hydroperoxidase HPII(III) K03781 katE; catalase [EC:1.11.1.6]
D S3727 katG; catalase; hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sfx00400]
D S0558 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D S1644 aroH; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D S2838 aroF; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D S4355 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D S1855 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D S3537 aroE; dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D S1854 ydiB; putative oxidoreductase K05887 ydiB; quinate/shikimate dehydrogenase [EC:1.1.1.282]
D S4354 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D S0332 aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71]
D S0967 aroA; 5-enolpyruvylshikimate-3-phosphate synthetase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D S2540 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D S1353 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D S1352 trpD; anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D S1351 trpC; N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D S1349 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D S1350 trpB; tryptophan synthase, beta protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D S2837 tyrA; chorismate mutase-T and prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D S2836 pheA; chorismate mutase-P and prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D S0989 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D S2204 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D S3579 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:sfx00410]
D S0130 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D S4173 gadA; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S1867 gadB; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S2648 hypothetical protein K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S1389 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D S2874 gabT; GABA transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D S1905 putative aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D S0132 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D S2360 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D S3830 fadB; 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D S2554 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:sfx00430]
D S4173 gadA; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S1867 gadB; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S2648 hypothetical protein K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S4298 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D S0271 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D S2508 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D S2507 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:sfx00450]
D S3730 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D S3256 metC; cystathionine beta-lyase (beta-cystathionase) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D S1779 malY; cystathionine beta-lyase; maltose regulon modulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D S3645 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D S3848 metE; tetrahydropteroyltriglutamate methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D S1842 hypothetical protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D S0888 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D S2967 cysN; ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D S2968 cysD; ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D S1574 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D S4139 selA; selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D S2303 metG; methionine tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:sfx00460]
D S2346 bglX; beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D S4298 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D S1571 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D S3157 ansB; periplasmic L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D S0821 ybiK; putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D S3944 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D S2770 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:sfx00470]
D S1267 dadX; alanine racemase 2 K01775 alr; alanine racemase [EC:5.1.1.1]
D S3578 alr; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D S0091 ddlB; D-alanine-D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D S0254 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D S3048 ygeA; putative resistance proteins K25316 racX; amino-acid racemase [EC:5.1.1.10]
D S0437 ybaS; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D S1696 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D S3695 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D S0087 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D S1414 ycjG; putative muconate cycloisomerase I K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D S2570 dsdA; D-serine dehydratase (deaminase) K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D S2058 yedO; putative 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D S3869 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D S3046 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D S1266 dadA; D-amino acid dehydrogenase subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:sfx00480]
D S4298 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D S1305 chaC; cation transport regulator K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D S0597 ybgL; putative lactam utilization protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D S0599 ybgJ; putative carboxylase K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D S0496 ybdK; hypothetical protein K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D S2902 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D S3142 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D S4490 pepA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D S2742 pepB; putative peptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D S0993 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D S0306 pepD; aminoacyl-histidine dipeptidase (peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D S1792 gst; glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D S0831 yliJ; putative transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D S2512 yfcF; hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D S4237 gor; glutathione oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D S1238 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D S2212 gnd; gluconate-6-phosphate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D S1928 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D S1638 btuE; Vitamin B12 transport periplasmic protein BtuE K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D S3165 speC; ornithine decarboxylase isozyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D S0120 speE; spermidine synthase, putrescine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D S3236 gsp; glutathionylspermidine synthetase/amidase K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:sfx00511]
D S3323 ebgA; evolved beta-D-galactosidase, alpha subunit K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D S3324 ebgC; evolved beta-D-galactosidase, beta subunit K12112 ebgC; evolved beta-galactosidase subunit beta
C 00540 Lipopolysaccharide biosynthesis [PATH:sfx00540]
D S0174 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D S0095 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D S0172 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D S0463 ybbF; hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D S0175 lpxB; tetraacyldisaccharide-1-P K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D S0975 ycaH; putative enzyme K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D S3455 yrbH; putative isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D S1302 kdsA; 2-dehydro-3-deoxyphosphooctulonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D S3456 yrbI; hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D S0978 kdsB; CTP:CMP-3-deoxy-D-manno-octulosonate transferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D S4096 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D S1138 htrB; heat shock protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D S1931 msbB; suppressor of htrB, heat shock protein K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D S2390 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D S3621 yjdB; hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D S4189 yhjW; hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D S0681 crcA; hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D S2469 hypothetical protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D S2582 ddg; putative heat shock protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D S0293 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D S3298 putative kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D S0193 yaeD; putative phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D S4109 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D S4107 rfaC; heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D S4108 rfaF; ADP-heptose--lps heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D S4101 waaP; lipopolysaccharide core biosynthesis protein K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D S3714 yijP; hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D S4099 waaQ; lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D S4103 waaY; putative LPS biosynthesis protein K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-]
D S4100 waaG; LPS alpha1,3-glucosyltransferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D S4102 waaL; UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D S4104 waaJ; putative UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58]
D S4105 waaD; lipopolysaccharide 1,2-N-acetylglucosaminetransferase K00713 waaD; UDP-glucose:(glucosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.-]
D S4106 waaI; lipid A-core, surface polymer ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:sfx00542]
D S3902 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:sfx00541]
D S1322 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D S2228 galF; UTP--glucose-1-P uridyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D S0553 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D S2225 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D S3897 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D S2227 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D S3898 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D S2223 rfbC; dTDP-6-deoxy-L-mannose-dehydrogenase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D S2226 rfbD; dTDP-6-deoxy-L-mannose-dehydrogenase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D S3895 wecE; putative regulator K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D S3896 wecD; hypothetical protein K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D S1767 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D S2234 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D S2235 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D S2239 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D S2238 wcaG; putative nucleotide di-P-sugar epimerase or dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D S3958 glmU; N-acetyl glucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D S3900 wecB; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D S3899 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:sfx00550]
D S3447 murA; UDP-N-glucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D S3690 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D S0090 murC; L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D S0087 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D S0084 murE; meso-diaminopimelate-adding enzyme K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D S0091 ddlB; D-alanine-D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D S0254 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D S0085 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D S0167 yaeS; hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D S3303 bacA; bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D S0837 ybjG; hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D S0086 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D S0089 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D S4348 mrcA; peptidoglycan synthetase, penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D S0144 mrcB; peptidoglycan synthetase; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D S0668 mrdA; peptidoglycan synthetase; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D S0083 ftsI; penicillin-binding protein 3; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D S0671 dacA; D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D S3440 dacB; D-alanyl-D-alanine carboxypeptidase, fraction B, penicillin-binding protein 4 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:sfx00552]
D S3303 bacA; bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D S0837 ybjG; hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D S3902 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:sfx00543]
D S2233 wcaJ; putative colanic acid biosynthsis UDP-glucose lipid carrier transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D S2236 wcaI; putative colanic biosynthesis glycosyl transferase K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D S2240 wcaF; putative transferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D S2246 wcaB; putative transferase K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-]
D S2230 wcaL; putative colanic acid biosynthesis glycosyl transferase K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
D S2231 wcaK; putative galactokinase K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ
D S3902 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D S3891 wecG; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D S3893 yifM; 4-alpha-l-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D S4122 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:sfx00730]
D S3669 thiC; thiamine biosynthesis protein, pyrimidine moiety K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D S2290 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D S3671 thiF; thiamin biosynthesis protein, thiazole moiety K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D S2749 yfhO; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D S0368 yajK; putative oxidoreductase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D S3673 thiH; thiamin biosynthesis protein, thiazole moiety K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D S0365 dxs; 1-deoxyxylulose-5-phosphate synthase; flavoprotein K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D S3672 thiG; thiamin biosynthesis protein, thiazole moiety K03149 thiG; thiazole synthase [EC:2.8.1.10]
D S2291 thiM; hydoxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D S3670 thiE; thiamin biosynthesis protein, thiazole moiety K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D S0362 thiL; thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D S4583 yjeQ; hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D S0252 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D S1190 ycfN; putative beta-glucosidase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D S0426 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:sfx00740]
D S1364 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D S0359 ribD; bifunctional pyrimidine deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D S0840 hypothetical protein K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D S3866 yigB; putative phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D S3286 ribB; 3,4 dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D S0360 ribH; riboflavin synthase, beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D S1822 ribE; riboflavin synthase, alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D S0024 ribF; putative regulator K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D S1048 appA; phosphoanhydride phosphorylase; pH 2.5 acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D S3580 aphA; diadenosine tetraphosphatase K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2]
D S4643 hpaC; component C of the 4HPA-hydroxylase K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D S3832 ubiB; ferrisiderophore reductase, flavin reductase (NADPH:flavin oxidoreductase) K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D S1001 ycbP; hypothetical protein K00299 ssuE; FMN reductase [EC:1.5.1.38]
D S2291 thiM; hydoxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D S3279 yqiE; hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D S1236 putative phosphohydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D S2522 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D S2955 padI; phenylacrylic acid decarboxylase-like protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:sfx00750]
D S1795 pdxH; pyridoxinephosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D S1793 pdxY; pyridoxal kinase 2 / pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D S2619 pdxK; pyridoxal/pyridoxine/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D S3112 epd; D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D S2531 pdxB; erythronate-4-phosphate dehyrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D S0966 serC; 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D S0051 pdxA; pyridoxal phosphate biosynthetic protein PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D S2799 pdxJ; pyridoxal phosphate biosynthetic protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D S0004 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:sfx00760]
D S0562 nadA; quinolinate synthetase, A protein K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D S0108 nadC; quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D S0992 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D S4687 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D S4693 nadR; probable nadAB transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D S0432 ushA; UDP-sugar hydrolase (5-nucleotidase) K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D S2960 surE; survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D S0664 ybeN; hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D S2990 mazG; hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D S3667 yjaD; hypothetical protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D S1603 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D S2914 ygaD; hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D S1570 ydjB; hypothetical protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D S1204 cobB; putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D S2852 yfjB; hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D S3700 udhA; putative oxidoreductase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D S1756 pntA; pyridine nucleotide transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D S1755 pntB; pyridine nucleotide transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:sfx00770]
D S0074 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S3917 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S3978 ilvB; acetolactate synthase I, valine-sensitive, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D S0075 ilvH; acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D S3977 ilvN; acetolactate synthase I, valine sensitive, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D S3915 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D S3910 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D S3913 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D S0133 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D S0370 apbA; ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D S0132 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D S3688 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D S4090 dfp; flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D S2990 mazG; hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D S4095 kdtB; putative enzyme of lipopolysaccharide synthesis K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D S0102 yacE; putative DNA repair protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D S2798 acpS; CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D S4270 yhhU; hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D S3914 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D S2360 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D S0130 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:sfx00780]
D S0768 bioC; biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D S2534 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D S1179 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D S1177 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D S0173 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D S1375 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D S4329 bioH; putative enzyme in biotin precursor biosynthesis K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D S0767 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D S3226 putative class II aminotransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D S0765 bioA; 7,8-diaminopelargonic acid synthetase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D S0769 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D S1746 hypothetical protein K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D S0766 bioB; biotin synthesis K01012 bioB; biotin synthase [EC:2.8.1.6]
D S3689 birA; biotin-[acetyl CoA carboxylase] holoenzyme synthetase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D S4184 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:sfx00785]
D S0673 lipB; lipoate biosynthesis protein LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D S0675 lipA; lipoate synthesis protein LipA K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D S0115 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D S0113 aceE; pyruvate dehydrogenase (decarboxylase component) K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D S0114 aceF; pyruvate dehydrogenase (dihydrolipoyltransacetylase component) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D S0584 sucA; 2-oxoglutarate dehydrogenase (decarboxylase component) K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D S0583 sucB; 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D S3088 gcvP; glycine decarboxylase, P protein of glycine cleavage system K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D S3090 gcvT; aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D S3089 gcvH; carrier of aminomethyl moiety via covalently bound lipoyl cofactor in glycine cleavage complex K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:sfx00790]
D S2367 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D S0252 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D S1941 ntpA; dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D S3304 ygiG; putative kinase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D S0137 folK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D S3435 folP; 7,8-dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D S2703 dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D S0047 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D S2526 folC; dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D S1364 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D S4384 pabA; p-aminobenzoate synthetase, component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D S1531 pabB; p-aminobenzoate synthetase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D S1180 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D S2514 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D S1759 ydgB; putative oxidoreductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D S2974 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D S2984 ygcF; hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D S0395 ybaX; hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D S3002 yqcD; hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D S0772 moaA; molybdopterin biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D S0774 moaC; molybdopterin biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D S0776 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D S0009 mog; molybdopterin biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D S0773 moaB; molybdopterin biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D S0820 moeA; molybdopterin biosynthesis MoeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D S3819 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:sfx00670]
D S0047 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D S1759 ydgB; putative oxidoreductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D S0468 folD; 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D S2770 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D S2693 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D S3657 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase, AICAR formyltransferase; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D S3544 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D S3090 gcvT; aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D S3645 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D S3035 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D S1318 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D S3728 metF; 5,10-methylene-tetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D S3097 ygfA; putative ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:sfx00860]
D S2605 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D S1297 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D S0149 hemL; glutamate-1-semialdehyde aminotransferase (aminomutase) K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D S0270 hemB; 5-aminolevulinate dehydratase; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D S3879 hemC; porphobilinogen deaminase, hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D S3880 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D S3666 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D S3809 hemN; O2-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D S3826 hemG; protoporphyrin oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D S0427 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D S3881 hemX; uroporphyrinogen III methylase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D S4376 cysG; uroporphyrinogen III methylase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D S0374 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D S1357 btuR; cob(I)alamin adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D S2170 cobS; cobalamin 5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D S2169 cobT; nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D S0665 phpB; Phpb K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D S1771 uidA; beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D S4407 bfr; bacterioferrin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sfx00130]
D S3565 ubiC; chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D S3566 ubiA; 4-hydroxybenzoate-octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D S3833 yigC; putative oxidoreductase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D S2522 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D S2955 padI; phenylacrylic acid decarboxylase-like protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D S3091 visC; hypothetical protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D S2445 ubiG; 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D S3092 ubiH; 2-octaprenyl-6-methoxyphenol 4-monoxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D S3843 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D S0642 yleB; hypothetical protein K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D S2478 menF; isochorismate hydroxymutase 2 K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D S2477 menD; 2-oxoglutarate decarboxylase; SHCHC synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D S2476 yfbB; putative enzyme K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D S2474 menC; O-succinylbenzoyl-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D S2473 menE; O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D S2475 menB; dihydroxynaphtoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D S1848 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D S3739 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D S1077 wrbA; trp repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D S4539 ytfG; putative oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:sfx00900]
D S0365 dxs; 1-deoxyxylulose-5-phosphate synthase; flavoprotein K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D S0166 yaeM; putative ATP-binding component of a transport system K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D S2963 ygbP; hypothetical protein K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D S1295 ychB; hypothetical protein K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D S2962 ygbB; hypothetical protein K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D S2733 gcpE; hypothetical protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D S0028 lytB; LytB protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D S3052 yqeF; putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D S2522 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D S2955 padI; phenylacrylic acid decarboxylase-like protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D S3074 putative enzyme K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D S0366 ispA; geranyltranstransferase (farnesyldiphosphate synthase) K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D S3445 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D S0167 yaeS; hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:sfx00907]
D S3830 fadB; 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D S2554 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D S4486 yjgB; putative oxidoreductase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D S3831 fadA; thiolase I, 3-ketoacyl-CoA thiolase, acetyl-CoA transferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D S2555 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D S3127 tktA; transketolase 1 isozyme K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D S2658 tktB; transketolase 2 isozyme K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:sfx00523]
D S2225 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D S3897 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D S2227 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D S3898 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D S2223 rfbC; dTDP-6-deoxy-L-mannose-dehydrogenase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D S2226 rfbD; dTDP-6-deoxy-L-mannose-dehydrogenase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:sfx01053]
D S2478 menF; isochorismate hydroxymutase 2 K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D S0515 entB; 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D S0516 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D S0501 entD; enterochelin synthetase, component D K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D S0514 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D S0504 entF; ATP-dependent serine activating enzyme K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D S0517 ybdB; hypothetical protein K24147 entH; proofreading thioesterase EntH
C 01055 Biosynthesis of vancomycin group antibiotics
D S2227 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D S3898 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:sfx00946]
D S2346 bglX; beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:sfx00332]
D S0313 proB; gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D S0314 proA; gamma-glutamylphosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:sfx00261]
D S2967 cysN; ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D S2968 cysD; ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D S3550 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D S0002 thrA; aspartokinase I, homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D S3729 metL; aspartokinase II and homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D S4307 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D S2671 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D S0030 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:sfx00521]
D S2593 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D S0616 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D S2752 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D S2225 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D S3897 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D S2227 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D S3898 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D S2223 rfbC; dTDP-6-deoxy-L-mannose-dehydrogenase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D S2226 rfbD; dTDP-6-deoxy-L-mannose-dehydrogenase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D S2593 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:sfx00525]
D S2225 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D S3897 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D S2227 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D S3898 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:sfx00401]
D S2837 tyrA; chorismate mutase-T and prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D S0989 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D S2204 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D S3579 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D S1353 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D S1176 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D S1177 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D S1375 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D S1178 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D S3224 hypothetical protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:sfx00999]
D S3137 metK; methionine adenosyltransferase 1 (AdoMet synthetase) K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D S3537 aroE; dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D S2346 bglX; beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:sfx00997]
D S4053 iucD; lysine:N6-hydroxylase K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59]
D S4055 iucB; siderophore biosynthesis protein K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
D S4056 iucA; siderophore biosynthesis protein K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38]
D S4054 iucC; siderophore biosynthesis protein K03895 iucC; aerobactin synthase [EC:6.3.2.39]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:sfx00362]
D S3831 fadA; thiolase I, 3-ketoacyl-CoA thiolase, acetyl-CoA transferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D S2555 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D S2554 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D S3830 fadB; 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D S3052 yqeF; putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:sfx00627]
D S1036 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D S2954 yclC; putative 4-hydroxybenzoate decarboxylase K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61]
D S2522 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D S2955 padI; phenylacrylic acid decarboxylase-like protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:sfx00364]
D S3247 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:sfx00625]
D S1880 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D S4141 yiaY; putative oxidoreductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D S1326 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:sfx00361]
D S3247 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:sfx00623]
D S3247 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:sfx00633]
D S0847 mdaA; modulator of drug activity A K10678 nfsA; nitroreductase [EC:1.-.-.-]
D S0493 nfnB; oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D S1809 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D S3242 hybC; hydrogenase-2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D S1041 hyaB; hydrogenase-1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D S1040 hyaA; hydrogenase-1 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D S3245 putative hydrogenase subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D S3831 fadA; thiolase I, 3-ketoacyl-CoA thiolase, acetyl-CoA transferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D S2555 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:sfx00930]
D S3830 fadB; 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D S2554 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:sfx00626]
D S1880 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D S4141 yiaY; putative oxidoreductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D S1326 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:sfx03020]
D S3675 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D S3674 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D S4435 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D S4080 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:sfx03010]
D S0971 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D S0162 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D S4416 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D S4434 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D S4427 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D S4625 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D S4403 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D S4424 rpsH; 30S ribosomal subunit protein S8, and regulator K02994 RP-S8; small subunit ribosomal protein S8
D S3485 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D S4409 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D S4433 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D S4402 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D S4432 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D S4423 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D S3423 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D S2846 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D S4419 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D S4627 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D S4414 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D S0022 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D S3311 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D S3678 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D S4413 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D S4410 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D S4411 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D S4422 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D S4425 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D S3676 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D S4628 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D S3677 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D S3679 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D S3486 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D S4420 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D S4429 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D S4417 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D S4436 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D S4426 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D S2843 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D S1633 rplT; 50S ribosomal subunit protein L20/regulator K02887 RP-L20; large subunit ribosomal protein L20
D S3444 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D S4415 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D S4412 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D S4421 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D S2401 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D S3443 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D S4092 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D S4418 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D S4428 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D S3733 rpmE; 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D S1173 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D S4093 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D S4010 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D S1632 rpmI; 50S ribosomal subunit protein A K02916 RP-L35; large subunit ribosomal protein L35
D S4431 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D S0194 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S2826 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3534 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3656 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3694 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3825 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3928 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S0197 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S2824 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3531 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3654 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3692 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3822 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3926 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S0198 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S2823 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3528 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3530 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3653 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3691 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3821 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3925 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:sfx00970]
D S2601 alaX; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D S2602 alaW; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D S0196 alaV; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D S3532 alaU; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D S3823 alaT; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D S0474 argU; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S1984 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S0728 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S0711 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S1662 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S3889 argX; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2561 argW; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2906 argZ; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2907 argY; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2908 argV; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2905 argQ; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2149 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D S2164 asnU; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D S2162 asnW; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D S2167 asnV; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D S0199 aspU; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D S3924 aspT; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D S0210 aspV; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D S2049 cysT; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D S0634 glnU; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D S0636 glnW; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D S0639 glnV; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D S0640 glnX; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D S2825 gltW; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D S3655 gltV; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D S3927 gltU; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D S3693 gltT; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D S0713 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S3684 glyT; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S0730 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S1982 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S4585 glyV; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S4586 glyX; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S4587 glyY; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S4588 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S2050 glyW; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S3066 glyU; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S3888 hisR; tRNA-His K14226 tRNA-His; tRNA His
D S0195 ileV; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D S3824 ileT; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D S3533 ileU; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D S3432 leuU; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S4485 leuX; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S0632 leuW; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S3887 leuT; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S4671 leuV; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S4673 leuQ; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S4672 leuP; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S2048 leuZ; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S0563 lysY; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D S0565 lysW; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D S0567 lysT; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D S2608 lysV; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D S0710 tRNA-Ile K14230 tRNA-Met; tRNA Met
D S0727 tRNA-Ile K14230 tRNA-Met; tRNA Met
D S0631 metT; tRNA-Met K14230 tRNA-Met; tRNA Met
D S0637 metU; tRNA-Met K14230 tRNA-Met; tRNA Met
D S1985 tRNA-Ile K14230 tRNA-Met; tRNA Met
D S3023 metZ; tRNA-Met K14230 tRNA-Met; tRNA Met
D S3024 metW; tRNA-Met K14230 tRNA-Met; tRNA Met
D S3429 metY; tRNA-Met K14230 tRNA-Met; tRNA Met
D S1663 tRNA-Ile K14230 tRNA-Met; tRNA Met
D S2138 tRNA-Ile K14230 tRNA-Met; tRNA Met
D S3316 ileX; tRNA-Ile K14230 tRNA-Met; tRNA Met
D S2864 ileY; tRNA-Ile K14230 tRNA-Met; tRNA Met
D S3167 pheV; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D S4555 pheU; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D S4190 proK; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D S2405 proL; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D S3886 proM; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D S2909 serV; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D S2147 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D S1039 serT; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D S0883 serW; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D S1099 serX; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D S0712 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S3529 thrV; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S3683 thrT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S3686 thrU; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S2137 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S1983 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S0729 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S0315 thrW; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S3923 trpT; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D S1317 tyrT; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D S3685 tyrU; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D S0564 valZ; tRNA-Val K14237 tRNA-Val; tRNA Val
D S0566 valT; tRNA-Val K14237 tRNA-Val; tRNA Val
D S2607 valY; tRNA-Val K14237 tRNA-Val; tRNA Val
D S2606 valX; tRNA-Val K14237 tRNA-Val; tRNA Val
D S1825 valV; tRNA-Val K14237 tRNA-Val; tRNA Val
D S1826 valW; tRNA-Val K14237 tRNA-Val; tRNA Val
D S4071 selC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D S2605 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D S0624 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D S2911 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D S1942 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D S0991 asnS; asparagine tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D S4165 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D S4166 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D S1630 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D S0893 serS; serine tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D S4139 selA; selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D S0465 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D S2303 metG; methionine tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D S3544 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D S4492 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D S0661 leuS; leucine tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D S0025 ileS; isoleucine tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D S3075 lysS; lysine tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D S2007 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D S0187 proS; proline tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D S2732 hisS; histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D S1634 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D S1635 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D S1794 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D S4360 trpS; tryptophan tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:sfx03060]
D S4430 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY
D S3681 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D S3433 secG; protein translocase membrane component K03075 secG; preprotein translocase subunit SecG
D S0353 secD; membrane protein K03072 secD; preprotein translocase subunit SecD
D S0354 secF; membrane protein K03074 secF; preprotein translocase subunit SecF
D S0352 yajC; hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D S4012 yidC; 60 KD inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D S0097 secA; preprotein translocase; secretion protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D S4120 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB
D S0096 yacA; hypothetical protein K13301 secM; secretion monitor
D S2847 ffh; GTP-binding export factor binds to signal sequence, GTP and RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D S0407 ffs; 4.5S RNA K01983 ffs; SRP RNA
D S4281 ftsY; cell division membrane protein K03110 ftsY; fused signal recognition particle receptor
D S3840 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D S3838 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D S3837 yigU; hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D S0676 ybeC; hypothetical protein K03425 tatE; sec-independent protein translocase protein TatE
D S2803 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D S0026 lspA; prolipoprotein signal peptidase (SPase II) K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:sfx04122]
D S2749 yfhO; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D S4275 yhhP; hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D S4401 yheL; hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D S4400 yheM; hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D S4399 yheN; hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D S1037 yccK; putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D S1235 ycfB; hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D S0776 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D S0772 moaA; molybdopterin biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D S0775 moaD; molybdopterin biosynthesis protein D K03636 moaD; sulfur-carrier protein
D S0819 moeB; molybdopterin biosynthesis MoeB protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D S0774 moaC; molybdopterin biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D S0009 mog; molybdopterin biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D S0773 moaB; molybdopterin biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D S0368 yajK; putative oxidoreductase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D S3671 thiF; thiamin biosynthesis protein, thiazole moiety K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:sfx03018]
D S3038 ygdP; putative invasion protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D S1168 rne; RNase E K08300 rne; ribonuclease E [EC:3.1.26.12]
D S3906 rhlB; putative ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D S2988 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D S3422 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D S0788 rhlE; putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D S4602 vacB; putative enzyme K12573 rnr; ribonuclease R [EC:3.1.13.1]
D S3420 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D S3855 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D S3903 rho; transcription termination factor Rho, polarity suppressor K03628 rho; transcription termination factor Rho
D S3753 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D S0014 dnaK; chaperone Hsp70; autoregulated heat shock protein K04043 dnaK; molecular chaperone DnaK
D S4564 mopA; GroEL, chaperone Hsp60, peptide-dependent ATPase, heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D S4595 hfq; host factor I for bacteriophage Q beta replication K03666 hfq; host factor-I protein
D S2694 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D S0138 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:sfx03030]
D S1918 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D S0209 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D S0177 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D S0422 dnaX; DNA polymerase III, tau and gamma subunits; DNA elongation factor III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D S1183 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D S0663 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D S4675 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D S4491 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D S4008 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D S0723 putative helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D S3577 dnaB; replicative DNA helicase; part of primosome K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D S3312 dnaG; DNA biosynthesis; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D S3584 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D S0208 rnhA; RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D S0176 rnhB; RNAse HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D S3813 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D S2612 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D S4082 yicF; putative enzyme K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:sfx03410]
D S1790 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D S2815 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D S3161 mutY; adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D S4094 mutM; formamidopyrimidine DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D S0596 nei; endonuclease VIII and DNA N-glycosylase with an AP lyase activity K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D S2258 alkA; 3-methyl-adenine DNA glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D S4186 tag; 3-methyl-adenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D S1594 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D S2373 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D S3813 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D S3077 recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D S2612 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D S4082 yicF; putative enzyme K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:sfx03420]
D S1198 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D S3583 uvrA; excision nuclease subunit A K03701 uvrA; excinuclease ABC subunit A
D S0770 uvrB; excision nuclease subunit B K03702 uvrB; excinuclease ABC subunit B
D S2052 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D S3865 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D S3813 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D S2612 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D S4082 yicF; putative enzyme K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:sfx03430]
D S2944 mutS; methyl-directed mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D S4593 mutL; enzyme in methyl-directed mismatch repair K03572 mutL; DNA mismatch repair protein MutL
D S3039 mutH; methyl-directed mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D S3865 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D S2193 sbcB; exonuclease I, 3 --> 5 specific; deoxyribophosphodiesterase K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D S2727 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D S0367 xseB; exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D S1920 hypothetical protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D S3077 recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D S3584 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D S0177 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D S4008 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D S0422 dnaX; DNA polymerase III, tau and gamma subunits; DNA elongation factor III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D S0663 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D S1183 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D S0209 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D S1918 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D S4491 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D S4675 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D S2612 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D S4082 yicF; putative enzyme K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D S4357 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:sfx03440]
D S3077 recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D S3584 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D S4007 recF; Rec protein K03629 recF; DNA replication and repair protein RecF
D S2800 recO; RecO protein K03584 recO; DNA repair protein RecO (recombination protein O)
D S0424 recR; recombination protein RecR K06187 recR; recombination protein RecR
D S2913 recA; DNA-dependent ATPase, DNA- and ATP-dependent coprotease K03553 recA; recombination protein RecA
D S3813 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D S1937 ruvA; Holliday junction helicase subunit B K03550 ruvA; holliday junction DNA helicase RuvA
D S1936 ruvB; Holliday junction helicase subunit A K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D S1939 ruvC; Holliday junction nuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D S4077 recG; DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D S3028 recB; DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D S3030 recC; DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D S3027 recD; DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D S0177 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D S4008 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D S0422 dnaX; DNA polymerase III, tau and gamma subunits; DNA elongation factor III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D S0663 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D S1183 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D S0209 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D S1918 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D S4491 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D S4675 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D S3734 priA; primosomal protein N (factor Y), putative helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D S4626 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D S0419 priC; primosomal replication protein N K04067 priC; primosomal replication protein N''
D S4663 dnaT; primosomal protein i K02317 dnaT; DNA replication protein DnaT
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:sfx03250]
D S4381 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda [PATH:sfx03258]
D S0753 minor tail protein K26974 L; Enterobacteria phage tail tip protein L
D S0754 putative tail assembly protein K26975 K; Enterobacteria phage tail tip assembly protein K
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:sfx02010]
D S2626 cysP; thiosulfate binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D S3752 sbp; periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D S2625 cysU; sulfate, thiosulfate transport system permease T protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D S2624 cysW; sulfate transport system permease W protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D S2623 cysA; ATP-binding component of sulfate permease A protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D S0274 tauA; taurine transport system periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D S0272 tauC; taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D S0273 tauB; taurine ATP-binding component of a transport system K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D S1000 ycbO; hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D S0994 ycbE; putative ATP-binding component of a transport system K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D S0549 modA; molybdate-binding periplasmic protein; permease K02020 modA; molybdate transport system substrate-binding protein
D S0548 modB; molybdate transport permease protein K02018 modB; molybdate transport system permease protein
D S0547 modC; ATP-binding component of molybdate transport K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D S0552 modF; ATP-binding component of molybdate transport system K05776 modF; molybdate transport system ATP-binding protein
D S0065 tbpA; thiamin-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D S0064 yabK; putative transport system permease protein K02063 thiP; thiamine transport system permease protein
D S0063 yabJ; putative ATP-binding component of a transport system K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D S1205 potD; spermidine/putrescine periplasmic transport protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D S1206 potC; spermidine/putrescine transport system permease K11070 potC; spermidine/putrescine transport system permease protein
D S1207 potB; spermidine/putrescine transport system permease K11071 potB; spermidine/putrescine transport system permease protein
D S1208 potA; ATP-binding component of spermidine/putrescine transport K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D S0850 potF; periplasmic putrescine-binding protein; permease protein K11073 potF; putrescine transport system substrate-binding protein
D S0853 potI; putrescine transport protein; permease K11074 potI; putrescine transport system permease protein
D S0852 potH; putrescine transport protein; permease K11075 potH; putrescine transport system permease protein
D S0851 potG; ATP-binding component of putrescine transport system K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D S2893 proX; glycine betaine/L-proline transport system permease protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D S2892 proW; glycine betaine/L-proline transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D S2891 proV; glycine betaine/L-proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D S2345 yehZ; putative transport system permease protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D S2344 yehY; putative transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D S2342 yehW; putative transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D S2343 yehX; putative ATP-binding component of a transport system K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D S3560 malE; periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D S3559 malF; part of maltose permease K10109 malF; maltose/maltodextrin transport system permease protein
D S3558 malG; part of maltose permease K10110 malG; maltose/maltodextrin transport system permease protein
D S3561 malK; ATP-binding component of transport system for maltose K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D S1407 ycjV; putative ATP-binding component of a transport system K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D S2765 yphD; putative transport system permease protein K23546 yphD; sugar transport system permease protein
D S2766 yphE; putative ATP-binding component of a transport system K23547 yphE; sugar transport system ATP-binding protein
D S3450 yrbC; hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D S3451 vpsC; cytoplasmic membrane protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D S3452 vpsB; integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D S3449 yrbB; hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D S3453 vpsA; putative ATP-binding component of a transport system K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D S3934 rbsC; D-ribose high-affinity transport protein K10440 rbsC; ribose transport system permease protein
D S3939 rbsD; D-ribose high-affinity transport system; membrane-associated protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D S2038 araH; L-arabinose transport system permease protein K10538 araH; L-arabinose transport system permease protein
D S2039 araG; L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D S4523 ytfT; putative transport system permease protein K23509 ytfT; galactofuranose transport system permease protein
D S4525 ytfR; putative ATP-binding component of a transport system K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D S2364 mglB; galactose-binding transport protein; receptor for galactose taxis K10540 mglB; methyl-galactoside transport system substrate-binding protein
D S2362 mglC; methyl-galactoside transport system permease protein K10541 mglC; methyl-galactoside transport system permease protein
D S2363 mglA; ATP-binding component of methyl-galactoside transport and galactose taxis K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D S4159 xylF; xylose binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D S4157 xylH; putative xylose transporter, membrane component K10544 xylH; D-xylose transport system permease protein
D S4158 xylG; putative ATP-binding protein of xylose transport system K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D S4292 ugpB; sn-glycerol 3-phosphate transport protein, periplasmic binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D S4293 ugpA; sn-glycerol 3-phosphate transport protein, integral membrane protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D S4294 ugpE; sn-glycerol 3-phosphate transport protein, integral membrane protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D S4045 pstS; high-affinity phosphate-specific transport protein; periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D S4044 pstC; high-affinity phosphate-specific transport protein, cytoplasmic membrane component K02037 pstC; phosphate transport system permease protein
D S4043 pstA; high-affinity phosphate-specific transport protein K02038 pstA; phosphate transport system permease protein
D S4042 pstB; ATP-binding component of high-affinity phosphate-specific transport system K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D S3612 phnD; periplasmic binding protein component of phosphonate transporter K02044 phnD; phosphonate transport system substrate-binding protein
D S3613 phnC; ATP-binding component of phosphonate transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D S2521 argT; lysine-, arginine-, ornithine-binding periplasmic protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D S2518 hisM; histidine transport, membrane protein M K10015 hisM; histidine transport system permease protein
D S2519 hisQ; histidine transport system permease protein K10016 hisQ; histidine transport system permease protein
D S2517 hisP; ATP-binding component of histidine transport K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D S2520 hisJ; histidine-binding periplasmic protein of high-affinity histidine transport system K10014 hisJ; histidine transport system substrate-binding protein
D S0804 glnH; periplasmic glutamine-binding protein; permease K10036 glnH; glutamine transport system substrate-binding protein
D S0803 glnP; glutamine transport protein GlnP K10037 glnP; glutamine transport system permease protein
D S0802 glnQ; ATP-binding component of glutamine high-affinity transport system K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D S0856 artJ; arginine 3rd transport system periplasmic binding protein K09996 artJ; arginine transport system substrate-binding protein
D S0859 artI; arginine 3rd transport system periplasmic binding protein K09997 artI; arginine transport system substrate-binding protein
D S0857 artM; arginine 3rd transport system permease protein K09998 artM; arginine transport system permease protein
D S0858 artQ; arginine 3rd transport system permease protein K09999 artQ; arginine transport system permease protein
D S0860 artP; ATP-binding component of 3rd arginine transport system K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D S0648 ybeJ; putative periplasmic binding transport protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D S0650 gltK; glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D S0649 gltJ; glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D S0651 gltL; ATP-binding protein of glutamate/aspartate transport system K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D S3521 yhdW; putative periplasmic binding transport protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D S3526 yhdY; putative transport system permease protein K09971 aapM; general L-amino acid transport system permease protein
D S3527 yhdZ; putative ATP-binding component of a transport system K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D S2057 yecS; putative transport system permease protein (former yecC) K10009 tcyB; L-cystine transport system permease protein
D S2056 yecC; putative ATP-binding component of a transport system K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D S4285 livJ; high-affinity amino acid transport protein, periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D S4287 livK; high-affinity leucine-specific transport protein, periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D S4288 livH; high-affinity branched-chain amino acid transport protein, membrane component K01997 livH; branched-chain amino acid transport system permease protein
D S4289 livM; high-affinity branched-chain amino acid transport protein, membrane component K01998 livM; branched-chain amino acid transport system permease protein
D S4290 livG; ATP-binding component of high-affinity branched-chain amino acid transport system K01995 livG; branched-chain amino acid transport system ATP-binding protein
D S4291 livF; ATP-binding component of leucine transport K01996 livF; branched-chain amino acid transport system ATP-binding protein
D S0190 yaeC; putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D S0191 yaeE; putative transport system permease protein K02072 metI; D-methionine transport system permease protein
D S0192 abc; ATP-binding component of a transporter K02071 metN; D-methionine transport system ATP-binding protein
D S1424 putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D S1330 oppA; periplasmic oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D S1331 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein
D S1332 oppC; oligopeptide transport permease protein K15582 oppC; oligopeptide transport system permease protein
D S1333 oppD; ATP-binding protein of oligopeptide ABC transport system K15583 oppD; oligopeptide transport system ATP-binding protein
D S1334 oppF; ATP-binding protein of oligopeptide ABC transport system K10823 oppF; oligopeptide transport system ATP-binding protein
D S4191 dppA; dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D S4192 dppB; dipeptide transport system permease protein 1 K12369 dppB; dipeptide transport system permease protein
D S4193 dppC; dipeptide transport system permease protein 2 K12370 dppC; dipeptide transport system permease protein
D S4194 dppD; putative ATP-binding component of dipeptide transport system K12371 dppD; dipeptide transport system ATP-binding protein
D S4195 dppF; putative ATP-binding component of dipeptide transport system K12372 dppF; dipeptide transport system ATP-binding protein
D S1381 sapA; peptide transport periplasmic protein K19226 sapA; cationic peptide transport system substrate-binding protein
D S1380 sapB; peptide transport permease protein K19227 sapB; cationic peptide transport system permease protein
D S1379 sapC; peptide transport permease protein K19228 sapC; cationic peptide transport system permease protein
D S1378 sapD; putative ATP-binding protein of peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein
D S1377 sapF; putative ATP-binding protein of peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein
D S4269 nikA; periplasmic binding protein for nickel K15584 nikA; nickel transport system substrate-binding protein
D S4268 nikB; transport of nickel, membrane protein K15585 nikB; nickel transport system permease protein
D S4267 nikC; transport of nickel, membrane protein K15586 nikC; nickel transport system permease protein
D S4266 nikD; ATP-binding protein of nickel transport system K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D S4265 nikE; ATP-binding protein of nickel transport system K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D S0823 putative transport protein K13889 gsiB; glutathione transport system substrate-binding protein
D S0824 putative transport system permease protein K13890 gsiC; glutathione transport system permease protein
D S0825 putative transport system permease protein K13891 gsiD; glutathione transport system permease protein
D S0822 putative ATP-binding component of a transport system K13892 gsiA; glutathione transport system ATP-binding protein
D S2393 yejA; hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein
D S2394 yejB; putative transport system permease protein K13894 yejB; microcin C transport system permease protein
D S2395 yejE; putative transport system permease protein K13895 yejE; microcin C transport system permease protein
D S2396 yejF; putative ATP-binding component of a transport system K13896 yejF; microcin C transport system ATP-binding protein
D S0512 fepB; ferric enterobactin (enterochelin) binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D S0510 fepD; ferric enterobactin (enterochelin) transport protein K23186 fepD; iron-siderophore transport system permease protein
D S0509 fepG; ferric enterobactin transport protein K23187 fepG; iron-siderophore transport system permease protein
D S0508 fepC; ATP-binding component of ferric enterobactin transport K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D S0147 fhuD; ferrichrome-iron transport protein FhuD K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D S0148 fhuB; ferrichrome-iron transport protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D S0146 fhuC; ATP-binding component of hydroxymate-dependent iron transport K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D S0153 yadT; hypothetical protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D S1637 btuC; Vitamin B12 transport permease protein K06073 btuC; vitamin B12 transport system permease protein
D S1639 btuD; Vitamin B12 transport protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D S1933 yebL; putative adhesin K09815 znuA; zinc transport system substrate-binding protein
D S1935 yebI; hypothetical protein K09816 znuB; zinc transport system permease protein
D S1934 yebM; putative ATP-binding component of a transport system K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D S1964 sitA; Iron transport protein K11604 sitA; manganese/iron transport system substrate-binding protein
D S1966 sitC; Iron transport protein K11605 sitC; manganese/iron transport system permease protein
D S1967 sitD; Iron transport protein, inner membrane component K11606 sitD; manganese/iron transport system permease protein
D S1965 sitB; Iron transport protein, ATP-binding component K11607 sitB; manganese/iron transport system ATP-binding protein
D S3117 putative ATP-binding protein of ABC transport system K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D S3118 putative ATP-binding protein of ABC transport system K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D S1710 ydeY; putative transport system permease protein K10556 lsrC; AI-2 transport system permease protein
D S1711 ydeZ; putative transport system permease protein K10557 lsrD; AI-2 transport system permease protein
D S1709 putative ATP-binding component of a transport system K10558 lsrA; AI-2 transport system ATP-binding protein
D S1200 ycfU; hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D S1202 ycfW; putative kinase K09808 lolC_E; lipoprotein-releasing system permease protein
D S1201 ycfV; putative ATP-binding component of a transport system K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D S2412 ccmD; heme exporter protein C K02196 ccmD; heme exporter protein D
D S2413 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D S2414 ccmB; heme exporter protein B, cytochrome c-type biogenesis protein K02194 ccmB; heme exporter protein B
D S2415 ccmA; ATP-binding protein of heme exporter A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D S4489 yjgP; hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D S3228 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D S4488 yjgQ; hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D S3227 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D S3459 yhbG; putative ATP-binding component of a transport system K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D S4283 ftsX; cell division membrane protein K09811 ftsX; cell division transport system permease protein
D S4282 ftsE; ATP-binding component of a membrane-associated complex involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D S0974 msbA; ATP-binding transport protein; multicopy suppressor of htrB K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D S0399 mdlA; ATP-binding component of a transport system K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D S0400 mdlB; putative ATP-binding component of a transport system K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D S0886 cydC; ATP-binding component of cytochrome-related transport K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D S0887 cydD; ATP-binding component of cytochrome-related transport K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D S0879 ybjZ; putative ATP-binding component of a transport system K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D S2425 yojI; putative ATP-binding component of a transport system K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:sfx02060]
D S2617 ptsI; PEP-protein phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D S2616 ptsH; PTS system protein HPr K02784 ptsH; phosphocarrier protein HPr
D S2618 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D S1185 ptsG; glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D S0625 nagE; N-acetylglucosamine-specific enzyme IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D S1778 malX; phosphotransferase system enzyme II K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D S4039 bglF; PTS system beta-glucosides, enzyme II, cryptic K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D S4512 treB; PTS system enzyme II K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D S2630 putative PTS enzyme II K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D S4135 mtlA; PTS system, mannitol-specific enzyme IIABC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D S0579 hrsA; protein modification enzyme K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195]
D S1607 celC; PEP-dependent phosphotransferase enzyme III for cellobiose, arbutin, and salicin K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D S1605 celA; PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D S1526 manX; PTS enzyme IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D S1525 manY; PTS enzyme IIC K02795 manY; mannose PTS system EIIC component
D S1524 manZ; PTS enzyme IID K02796 manZ; mannose PTS system EIID component
D S3638 sorF; putative sorbose-permease PTS system IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D S3639 sorB; putative sorbose-permease PTS system IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D S3640 sorA; putative sorbose-permease PTS system IIC component K02814 sorA; sorbose PTS system EIIC component
D S3641 sorM; putative sorbose-permease PTS system IID component K02815 sorM; sorbose PTS system EIID component
D S3386 agaF; putative transport enzyme subunit K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D S3383 agaV; cytoplasmic transport protein N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D S3384 agaW; N-acetylgalactosameine-specific IIC component 2 K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D S3385 agaE; putative transport enzyme subunit K02747 agaE; N-acetylgalactosamine PTS system EIID component
D S3391 agaC; N-acetylgalactosamine-specific transport IIC component 1 K10985 agaC; galactosamine PTS system EIIC component
D S3392 agaD; N-acetylglucosamine transport enzyme IID component 1 K10986 agaD; galactosamine PTS system EIID component
D S2918 srlB; PTS system, glucitol/sorbitol-specific enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D S2917 srlE; PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D S2282 gatA; galactitol-specific enzyme IIA of phosphotransferase system K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D S2281 gatB; galactitol-specific enzyme IIB of phosphotransferase system K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D S2280 gatC; PTS system galactitol-specific enzyme IIC K02775 gatC; galactitol PTS system EIIC component
D S4620 ptxA; putative PTS system enzyme II A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D S4619 sgaB; hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D S4618 sgaT; hypothetical protein K03475 ulaA; ascorbate PTS system EIIC component
D S2383 fruB; PTS system, fructose-specific IIA/fpr component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D S2381 fruA; PTS system, fructose-specific transport protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D S2382 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D S3037 ptsP; PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins) K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D S3464 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D S3462 ptsN; phosphotransferase system enzyme IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:sfx03070]
D S3280 tolC; outer membrane channel TolC K12340 tolC; outer membrane protein
D S0353 secD; membrane protein K03072 secD; preprotein translocase subunit SecD
D S0354 secF; membrane protein K03074 secF; preprotein translocase subunit SecF
D S3681 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D S3433 secG; protein translocase membrane component K03075 secG; preprotein translocase subunit SecG
D S4430 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY
D S0352 yajC; hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D S4012 yidC; 60 KD inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D S0097 secA; preprotein translocase; secretion protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D S0096 yacA; hypothetical protein K13301 secM; secretion monitor
D S4281 ftsY; cell division membrane protein K03110 ftsY; fused signal recognition particle receptor
D S4120 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB
D S2847 ffh; GTP-binding export factor binds to signal sequence, GTP and RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D S3840 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D S3838 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D S3837 yigU; hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D S0676 ybeC; hypothetical protein K03425 tatE; sec-independent protein translocase protein TatE
D S0284 rhsG; putative Rhs-family protein K11904 vgrG; type VI secretion system secreted protein VgrG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:sfx02020]
D S0345 phoR; positive and negative sensor protein for pho regulon K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D S0344 phoB; positive response regulator for pho regulon K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D S0252 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D S4045 pstS; high-affinity phosphate-specific transport protein; periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D S1231 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D S1232 phoP; transcriptional regulatory protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D S4340 envZ; protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D S4339 ompR; response regulator (sensor, EnvZ) K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D S2429 ompC; outer membrane protein 1b (Ib;c) K09475 ompC; outer membrane pore protein C
D S0990 ompF; outer membrane protein 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
D S2105 putative outer membrane pore protein K09476 ompF; outer membrane pore protein F
D S3758 cpxA; probable sensor protein (histidine protein kinase) K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D S3757 cpxR; transcriptional regulator in 2-component system K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D S3347 yqjB; hypothetical protein K25864 mzrA; modulator protein MzrA
D S1763 rstB; sensor histidine protein kinase, RstA regulator K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D S1761 rstA; response transcriptional regulatory protein (RstB sensor) K07661 rstA; two-component system, OmpR family, response regulator RstA
D S0156 htrA; periplasmic serine protease Do, heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D S4702 creC; catabolite repression sensor kinase for PhoB, alternative sensor for pho regulon K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D S4701 creB; catabolic regulation response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D S2268 baeS; sensor protein for BaeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D S2269 baeR; transcriptional response regulatory protein (sensor BaeS) K07664 baeR; two-component system, OmpR family, response regulator BaeR
D S2266 yegO; hypothetical protein K07789 mdtC; multidrug efflux pump
D S2267 yegB; putative transport protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D S2663 acrD; multidrug resistance protein K18324 acrD; multidrug efflux pump
D S3619 basS; sensor protein for BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D S3620 basR; transcriptional regulatory protein K07771 basR; two-component system, OmpR family, response regulator BasR
D S2465 putative enzyme K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D S0479 ybcZ; putative 2-component sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D S0480 ylcA; putative 2-component transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D S0481 ylcB; putative resistance protein K07796 cusC; outer membrane protein, copper/silver efflux system
D S0482 ylcC; hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D S0490 ybdE; putative inner membrane component for iron transport K07787 cusA; copper/silver efflux system protein
D S3271 ygiY; putative 2-component sensor protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D S3270 ygiX; putative 2-component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D S2031 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D S2062 fliC; flagellin K02406 fliC; flagellin
D S2030 motA; proton conductor component of motor K02556 motA; chemotaxis protein MotA
D S0609 kdpA; ATPase of high-affinity potassium transport system, A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D S0611 kdpC; potassium-transporting ATPase K01548 kdpC; potassium-transporting ATPase KdpC subunit
D S1065 torR; TorCAD response regulator K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D S1066 torC; trimethylamine N-oxide reductase, cytochrome c-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D S3468 arcB; histidine protein kinase/phosphatase, aerobic respiration sensor-response protein, sensor for arcA K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D S4704 arcA; negative response regulator of genes in aerobic pathways (sensors, ArcB and CpxA) K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D S4009 dnaA; replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D S0502 fepA; ferrienterobactin receptor precursor K19611 fepA; ferric enterobactin receptor
D S0542 citC; citrate lyase synthetase (citrate (pro-3S)-lyase ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D S0541 citD; citrate lyase acyl carrier protein (gamma chain) K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D S0540 citE; citrate lyase beta chain (acyl lyase subunit) K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D S0539 citF; citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D S0538 ybdU; hypothetical protein K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D S0537 citG; hypothetical protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D S3632 yjdH; putative 2-component sensor protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D S3631 yjdG; putative 2-component transcriptional regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR
D S3630 dcuB; anaerobic dicarboxylate transport K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D S1879 sfcA; NAD-linked malate dehydrogenase (malic enzyme) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D S1309 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D S1308 narL; nitrate/nitrite response regulator protein NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D S2407 narP; nitrate/nitrite response regulator (sensor NarQ) K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D S1311 narG; nitrate reductase 1 alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D S1312 narH; nitrate reductase 1, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D S1314 narI; nitrate reductase 1, cytochrome b(NR), gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D S1313 narJ; nitrate reductase 1, delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D S1884 fdnG; formate dehydrogenase-N, nitrate-inducible, alpha subunit K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D S1883 fdnH; formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit K08349 fdnH; formate dehydrogenase-N, beta subunit
D S1882 fdnI; formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit
D S4577 frdA; fumarate reductase, anaerobic, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D S4576 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D S4575 frdC; fumarate reductase, anaerobic, membrane anchor polypeptide K00246 frdC; succinate dehydrogenase subunit C
D S4574 frdD; fumarate reductase, anaerobic, membrane anchor polypeptide K00247 frdD; succinate dehydrogenase subunit D
D S3974 uhpC; regulator of uhpT K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D S3975 uhpB; sensor histidine protein kinase, phosphorylates UhpA K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D S3976 uhpA; response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D S3973 uhpT; hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D S0189 rcsF; exopolysaccharide synthesis regulator K06080 rcsF; RcsF protein
D S2433 rcsC; sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D S2431 yojN; putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D S2090 rcsA; positive regulator for ctr capsule biosynthesis, positive transcription factor K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D S2432 rcsB; positive response regulator for colanic capsule biosynthesis, (sensor, RcsC) K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D S2993 barA; sensor-regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D S2053 uvrY; putative 2-component transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D S2055 sdiA; transcriptional regulator of ftsQAZ gene cluster K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D S2910 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D S2574 evgS; putative sensor for regulator EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D S2573 evgA; putative positive transcription regulator (sensor EvgS) K07690 evgA; two-component system, NarL family, response regulator EvgA
D S2572 emrK; multidrug resistance protein K K07797 emrK; multidrug resistance protein K
D S2571 emrY; multidrug resistance protein Y K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein
D S1655 hypothetical protein K23236 safA; two-component-system connector protein SafA
D S4573 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D S4463 fimC; periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D S1006 ycbS; putative outer membrane protein K07347 fimD; outer membrane usher protein
D S4048 lpfC; putative long polar fimbriae K07347 fimD; outer membrane usher protein
D S2296 yehB; putative outer membrane protein K07347 fimD; outer membrane usher protein
D S4254 probable fimbrial protein remnant K07347 fimD; outer membrane usher protein
D S3211 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D S0160 glnD; PII-uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D S2772 glnB; regulatory protein P-II for glutamine synthetase K04751 glnB; nitrogen regulatory protein P-II 1
D S3807 glnL; histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D S3808 glnG; sensor glnL response regulator (nitrogen regulator I, NRI) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D S3806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D S3660 hydH; sensor kinase for HydG, hydrogenase 3 activity K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D S3659 hydG; response regulator of hydrogenase 3 activity (sensor HydH) K07713 zraR; two-component system, NtrC family, response regulator HydG
D S3661 yjaI; hypothetical protein K07803 zraP; zinc resistance-associated protein
D S3052 yqeF; putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D S4207 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D S3460 rpoN; sigma(54 or 60) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D S2775 yfhK; putative 2-component sensor protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D S2773 yfhA; putative 2-component transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D S1040 hyaA; hydrogenase-1 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D S3245 putative hydrogenase subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D S3242 hybC; hydrogenase-2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D S1041 hyaB; hydrogenase-1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D S1042 hyaC; probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D S2024 cheR; response regulator for chemotaxis; protein glutamate methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D S4656 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D S2026 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D S1485 trg; methyl-accepting chemotaxis protein III, ribose sensor receptor K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D S2025 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D S2027 cheW; positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW
D S2028 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D S2022 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D S2023 cheB; response regulator for chemotaxis (cheA sensor); protein methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D S0651 gltL; ATP-binding protein of glutamate/aspartate transport system K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D S0650 gltK; glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D S0649 gltJ; glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D S0648 ybeJ; putative periplasmic binding transport protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D S4387 crp; cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D S0437 ybaS; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D S1696 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D S0577 cydA; cytochrome d terminal oxidase, polypeptide subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D S1046 appC; probable third cytochrome oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D S0576 cydB; cytochrome d terminal oxidase polypeptide subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D S1047 appB; probable third cytochrome oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D S3280 tolC; outer membrane channel TolC K12340 tolC; outer membrane protein
D S1052 yccZ; BexD-like protein K01991 wza; polysaccharide biosynthesis/export protein
D S2250 wza; putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D S1051 yccY; putative phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D S2249 wzb; probable protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D S2248 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D S3900 wecB; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D S3899 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D S0940 ybhC; putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D S1155 flgM; flagellar protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D S3165 speC; ornithine decarboxylase isozyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:sfx02024]
D S2901 ygaG; hypothetical protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D S4595 hfq; host factor I for bacteriophage Q beta replication K03666 hfq; host factor-I protein
D S1353 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D S2221 rfbF; dTDP-rhamnosyl transferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D S0558 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D S1644 aroH; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D S2838 aroF; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D S3271 ygiY; putative 2-component sensor protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D S3270 ygiX; putative 2-component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D S2775 yfhK; putative 2-component sensor protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D S2773 yfhA; putative 2-component transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D S2031 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D S2055 sdiA; transcriptional regulator of ftsQAZ gene cluster K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D S4173 gadA; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S1867 gadB; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S2648 hypothetical protein K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D S1868 xasA; acid sensitivity protein, putative transporter K20265 gadC; glutamate:GABA antiporter
D S2649 putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D S1710 ydeY; putative transport system permease protein K10556 lsrC; AI-2 transport system permease protein
D S1711 ydeZ; putative transport system permease protein K10557 lsrD; AI-2 transport system permease protein
D S1709 putative ATP-binding component of a transport system K10558 lsrA; AI-2 transport system ATP-binding protein
D S1708 ydeW; putative sorC family transcriptional regulator K11531 lsrR; lsr operon transcriptional repressor
D S1704 hypothetical protein K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D S1703 hypothetical protein K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D S2718 trbJ; putative mating pair formation protein K20266 trbJ; type IV secretion system protein TrbJ
D S2716 trbL; putative mating pair formation protein K07344 trbL; type IV secretion system protein TrbL
D S1906 putative transport system permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D S4285 livJ; high-affinity amino acid transport protein, periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D S4287 livK; high-affinity leucine-specific transport protein, periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D S4288 livH; high-affinity branched-chain amino acid transport protein, membrane component K01997 livH; branched-chain amino acid transport system permease protein
D S4289 livM; high-affinity branched-chain amino acid transport protein, membrane component K01998 livM; branched-chain amino acid transport system permease protein
D S4290 livG; ATP-binding component of high-affinity branched-chain amino acid transport system K01995 livG; branched-chain amino acid transport system ATP-binding protein
D S4291 livF; ATP-binding component of leucine transport K01996 livF; branched-chain amino acid transport system ATP-binding protein
D S2090 rcsA; positive regulator for ctr capsule biosynthesis, positive transcription factor K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D S1538 fadD; acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D S4387 crp; cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D S3572 yjbK; putative regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D S1364 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D S0359 ribD; bifunctional pyrimidine deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D S1902 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D S1424 putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D S1330 oppA; periplasmic oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D S1331 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein
D S1332 oppC; oligopeptide transport permease protein K15582 oppC; oligopeptide transport system permease protein
D S1333 oppD; ATP-binding protein of oligopeptide ABC transport system K15583 oppD; oligopeptide transport system ATP-binding protein
D S1334 oppF; ATP-binding protein of oligopeptide ABC transport system K10823 oppF; oligopeptide transport system ATP-binding protein
D S1873 putative transport protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D S1874 putative ATP-binding component of a transport system K02031 ddpD; peptide/nickel transport system ATP-binding protein
D S4012 yidC; 60 KD inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D S3681 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D S3433 secG; protein translocase membrane component K03075 secG; preprotein translocase subunit SecG
D S4430 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY
D S0352 yajC; hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D S0097 secA; preprotein translocase; secretion protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D S4281 ftsY; cell division membrane protein K03110 ftsY; fused signal recognition particle receptor
D S4120 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB
D S2847 ffh; GTP-binding export factor binds to signal sequence, GTP and RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:sfx02030]
D S4656 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D S2026 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D S1485 trg; methyl-accepting chemotaxis protein III, ribose sensor receptor K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D S2025 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D S3560 malE; periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D S2364 mglB; galactose-binding transport protein; receptor for galactose taxis K10540 mglB; methyl-galactoside transport system substrate-binding protein
D S4191 dppA; dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D S2028 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D S2027 cheW; positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW
D S2022 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D S2021 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D S2023 cheB; response regulator for chemotaxis (cheA sensor); protein methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D S2024 cheR; response regulator for chemotaxis; protein glutamate methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D S2078 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D S2084 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D S2085 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D S2030 motA; proton conductor component of motor K02556 motA; chemotaxis protein MotA
D S2029 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D S0298 mbhA; putative motility protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:sfx02040]
D S2076 fliE; flagellar hook-basal body 11K protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D S2078 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D S2079 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D S2080 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D S2082 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D S2083 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D S2084 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D S2085 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D S2086 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D S2088 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D S2089 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D S2012 flhE; flagellar protein K03516 flhE; flagellar protein FlhE
D S0299 fhiA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D S2014 flhB; putative part of export apparatus for flagellar proteins K02401 flhB; flagellar biosynthesis protein FlhB
D S1156 flgA; flagellar basal body P-ring protein FlgA precursor K02386 flgA; flagellar basal body P-ring formation protein FlgA
D S1157 flgB; flagellar basal-body rod protein FlgB (proximal rod protein) K02387 flgB; flagellar basal-body rod protein FlgB
D S1159 flgD; flagellar hook formation protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D S1160 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D S1162 flgG; flagellar basal body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG
D S1163 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D S1164 flgI; flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D S1165 flgJ; flagellar basal body protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D S2062 fliC; flagellin K02406 fliC; flagellin
D S2063 fliD; flagellar protein FliD K02407 fliD; flagellar hook-associated protein 2
D S2064 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D S2065 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D S2030 motA; proton conductor component of motor K02556 motA; chemotaxis protein MotA
D S2029 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D S0298 mbhA; putative motility protein K02557 motB; chemotaxis protein MotB
D S1155 flgM; flagellar protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D S1154 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D S2060 fliZ; putative regulator of FliA K02425 fliZ; regulator of sigma S factor FliZ
D S3313 rpoD; sigmaD(70) factor of RNA polymerase K03086 rpoD; RNA polymerase primary sigma factor
D S2031 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D S3460 rpoN; sigma(54 or 60) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D S2988 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:sfx04980]
D S3103 ygfD; putative nucleotide-binding protein K07588 MMAA; GTPase [EC:3.6.5.-]
D S3102 sbm; methylmalonyl-CoA mutase (MCM) K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D S3645 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis [PATH:sfx05131]
D S4465 fimA; major type 1 subunit fimbrin (pilin) K07345 fimA; major type 1 subunit fimbrin (pilin)
D S3961 lpfA; putative major fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D S2062 fliC; flagellin K02406 fliC; flagellin
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:sfx01501]
D S0990 ompF; outer membrane protein 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
D S2105 putative outer membrane pore protein K09476 ompF; outer membrane pore protein F
D S2429 ompC; outer membrane protein 1b (Ib;c) K09475 ompC; outer membrane pore protein C
D S0384 ampG; beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D S1191 ycfO; hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D S4573 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D S1424 putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D S1330 oppA; periplasmic oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D S1331 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein
D S1332 oppC; oligopeptide transport permease protein K15582 oppC; oligopeptide transport system permease protein
D S1333 oppD; ATP-binding protein of oligopeptide ABC transport system K15583 oppD; oligopeptide transport system ATP-binding protein
D S1334 oppF; ATP-binding protein of oligopeptide ABC transport system K10823 oppF; oligopeptide transport system ATP-binding protein
D S0304 hypothetical protein K18148 rtcB; release factor H-coupled RctB family protein
D S0415 acrA; acriflavin resistance protein AcrA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D S0414 acrB; acriflavine resistance protein K18138 acrB; multidrug efflux pump
D S3280 tolC; outer membrane channel TolC K12340 tolC; outer membrane protein
D S4348 mrcA; peptidoglycan synthetase, penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D S0668 mrdA; peptidoglycan synthetase; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D S0083 ftsI; penicillin-binding protein 3; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:sfx01502]
D S0091 ddlB; D-alanine-D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D S0254 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D S1267 dadX; alanine racemase 2 K01775 alr; alanine racemase [EC:5.1.1.1]
D S3578 alr; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D S0085 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D S0086 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D S0089 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sfx01503]
D S1231 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D S1232 phoP; transcriptional regulatory protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D S4189 yhjW; hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D S0681 crcA; hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D S2465 putative enzyme K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D S2466 putative sugar transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D S2467 ybfG; putative transformylase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D S2468 hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D S2469 hypothetical protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D S2567 sucrose-6 phosphate hydrolase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D S2471 putative transport/receptor protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D S3619 basS; sensor protein for BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D S3620 basR; transcriptional regulatory protein K07771 basR; two-component system, OmpR family, response regulator BasR
D S3621 yjdB; hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D S1381 sapA; peptide transport periplasmic protein K19226 sapA; cationic peptide transport system substrate-binding protein
D S1380 sapB; peptide transport permease protein K19227 sapB; cationic peptide transport system permease protein
D S1379 sapC; peptide transport permease protein K19228 sapC; cationic peptide transport system permease protein
D S1378 sapD; putative ATP-binding protein of peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein
D S1377 sapF; putative ATP-binding protein of peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein
D S0185 cutF; copper homeostasis protein (lipoprotein) K06079 cutF; copper homeostasis protein (lipoprotein)
D S3758 cpxA; probable sensor protein (histidine protein kinase) K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D S3757 cpxR; transcriptional regulator in 2-component system K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D S4592 amiB; N-acetylmuramoyl-l-alanine amidase II, murein hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D S2636 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D S3025 putative amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D S1197 ycfS; hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D S0156 htrA; periplasmic serine protease Do, heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D S3816 dsbA; protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D S4381 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D S1690 marA; transcriptional activator of defense systems K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D S0415 acrA; acriflavin resistance protein AcrA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D S0414 acrB; acriflavine resistance protein K18138 acrB; multidrug efflux pump
D S3280 tolC; outer membrane channel TolC K12340 tolC; outer membrane protein
D S0174 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:sfx01000]
C 01001 Protein kinases [BR:sfx01001]
D S2248 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D S0345 phoR; positive and negative sensor protein for pho regulon K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D S1231 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D S4340 envZ; protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D S1763 rstB; sensor histidine protein kinase, RstA regulator K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D S3758 cpxA; probable sensor protein (histidine protein kinase) K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D S4702 creC; catabolite repression sensor kinase for PhoB, alternative sensor for pho regulon K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D S2268 baeS; sensor protein for BaeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D S3619 basS; sensor protein for BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D S0479 ybcZ; putative 2-component sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D S3271 ygiY; putative 2-component sensor protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D S3468 arcB; histidine protein kinase/phosphatase, aerobic respiration sensor-response protein, sensor for arcA K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D S2112 yedV; putative 2-component sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D S1309 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D S3975 uhpB; sensor histidine protein kinase, phosphorylates UhpA K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D S2431 yojN; putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D S2433 rcsC; sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D S2993 barA; sensor-regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D S2574 evgS; putative sensor for regulator EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D S3632 yjdH; putative 2-component sensor protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D S2325 yehU; putative 2-component sensor protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D S3807 glnL; histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D S3660 hydH; sensor kinase for HydG, hydrogenase 3 activity K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D S2775 yfhK; putative 2-component sensor protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D S2028 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:sfx01009]
D S3753 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D S0425 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
D S4691 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:sfx01002]
D S0026 lspA; prolipoprotein signal peptidase (SPase II) K03101 lspA; signal peptidase II [EC:3.4.23.36]
D S1043 hyaD; Hydrogenase-1 operon protein hyaD K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D S3241 hybD; hydrogenase-2 component K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D S2725 guaA; GMP synthetase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D S1385 ycjL; probable amidotransferase subunit K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
D S2391 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D S1815 ydhO; putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D S0296 yafL; putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D S1640 nlpC; lipoprotein K13695 nlpC; probable lipoprotein NlpC
D S2523 purF; amidophosphoribosyltransferase, PRPP amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D S3470 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D S3959 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D S0630 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D S2111 yedU; hypothetical protein K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D S3411 yhbO; hypothetical protein K05520 yhbO; deglycase [EC:3.5.1.124]
D S0369 thiJ; 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis (ThiJ) protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D S2168 erfK; hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D S1840 ynhG; hypothetical protein K19234 ynhG; L,D-transpeptidase YnhG
D S0812 ybiS; hypothetical protein K19235 ybiS; L,D-transpeptidase YbiS
D S1197 ycfS; hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D S0986 ycbB; putative amidase K21470 ycbB; L,D-transpeptidase YcbB
D S0993 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D S4239 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D S1682 dcp; dipeptidyl carboxypeptidase II K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D S3029 ptr; protease III K01407 ptrA; protease III [EC:3.4.24.55]
D S4490 pepA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D S2742 pepB; putative peptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D S2665 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D S1209 pepT; putative peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D S0306 pepD; aminoacyl-histidine dipeptidase (peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D S0458 ylbB; putative hydantoin utilization protein K02083 allC; allantoate deiminase [EC:3.5.3.9]
D S1932 yebA; hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D S0161 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D S3829 pepQ; proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D S3093 pepP; proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D S2969 iap; alkaline phosphatase isozyme conversion, aminopeptidase K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
D S4446 iadA; isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D S3436 ftsH; Zn metallo-peptidase, integral membrane cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D S3773 frvX; hypothetical protein in frv operon K18530 frvX; putative aminopeptidase FrvX [EC:3.4.11.-]
D S1512 htpX; heat shock protein, integral membrane protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D S0969 ycaL; putative heat shock protein K07387 K07387; metalloprotease [EC:3.4.24.-]
D S3128 yggG; hypothetical protein K07387 K07387; metalloprotease [EC:3.4.24.-]
D S2687 hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D S0169 yaeL; hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D S2539 mepA; murein DD-endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D S2148 hypothetical protein K09933 mtfA; MtfA peptidase
D S1751 hypothetical protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D S0156 htrA; periplasmic serine protease Do, heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D S3490 degS; protease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D S1921 ptrB; protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D S0671 dacA; D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D S2348 pbpG; penicillin-binding protein 7 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D S0259 yaiH; putative enzyme K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D S3440 dacB; D-alanyl-D-alanine carboxypeptidase, fraction B, penicillin-binding protein 4 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D S0388 clpP; ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D S0390 lon; DNA-binding, ATP-dependent protease La; heat shock K-protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D S1021 putative ATP-dependent protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D S3569 lexA; regulator for SOS(lexA) regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
D S1260 umuD; mutagenesis and repair protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D S2803 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D S1511 prc; carboxy-terminal protease for penicillin-binding protein 3 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D S1572 sppA; protease IV, a signal peptide peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D S1359 sohB; putative protease K04774 sohB; serine protease SohB [EC:3.4.21.-]
D S3643 pepE; peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D S4318 glpG; protein of glp regulon K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D S1271 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D S1222 putative head maturation protease of prophage CP-933C K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D S3737 hslV; heat shock protein HslVU, proteasome-related peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D S0821 ybiK; putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D S4298 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D S2271 yegQ; hypothetical protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D S3417 yhbV; hypothetical protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D S3416 yhbU; putative collagenase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D S4517 pmbA; putative peptide maturation protein K03592 pmbA; PmbA protein
D S3499 tldD; suppressor of inhibition by CsrA K03568 tldD; TldD protein
D S2423 eco; ecotin, serine protease inhibitor K08276 eco; ecotin
D S2436 hypothetical protein K06894 yfhM; alpha-2-macroglobulin
D S4598 hflC; protease specific for phage lambda cII repressor K04087 hflC; modulator of FtsH protease HflC
D S4597 hflK; protease specific for phage lambda cII repressor K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:sfx01003]
D S4311 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D S0144 mrcB; peptidoglycan synthetase; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D S4348 mrcA; peptidoglycan synthetase, penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D S3891 wecG; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D S3893 yifM; 4-alpha-l-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D S3902 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D S1119 mdoH; membrane glycosyltransferase K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D S2230 wcaL; putative colanic acid biosynthesis glycosyl transferase K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:sfx01005]
D S0174 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D S0175 lpxB; tetraacyldisaccharide-1-P K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D S0095 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D S0172 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D S0463 ybbF; hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D S0975 ycaH; putative enzyme K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D S1138 htrB; heat shock protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D S1931 msbB; suppressor of htrB, heat shock protein K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D S2582 ddg; putative heat shock protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D S2390 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D S4096 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D S2469 hypothetical protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D S0681 crcA; hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D S3621 yjdB; hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D S4189 yhjW; hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D S1302 kdsA; 2-dehydro-3-deoxyphosphooctulonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D S0978 kdsB; CTP:CMP-3-deoxy-D-manno-octulosonate transferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D S3456 yrbI; hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D S3455 yrbH; putative isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D S4107 rfaC; heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D S4105 waaD; lipopolysaccharide 1,2-N-acetylglucosaminetransferase K00713 waaD; UDP-glucose:(glucosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.-]
D S4108 rfaF; ADP-heptose--lps heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D S4100 waaG; LPS alpha1,3-glucosyltransferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D S4104 waaJ; putative UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58]
D S4106 waaI; lipid A-core, surface polymer ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D S4102 waaL; UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D S4101 waaP; lipopolysaccharide core biosynthesis protein K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D S4099 waaQ; lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D S4103 waaY; putative LPS biosynthesis protein K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-]
D S3714 yijP; hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D S0293 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D S0193 yaeD; putative phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D S3298 putative kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D S4109 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D S2221 rfbF; dTDP-rhamnosyl transferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D S2220 rfbG; dTDP-rhamnosyl transferase K12991 rfbG; rhamnosyltransferase [EC:2.4.1.-]
D S3892 wecF; TDP-Fuc4NAc:lipidII transferase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D S2210 wzzB; regulator of length of O-antigen component of lipopolysaccharide chains K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator)
D S0320 gtrBI; putative bactoprenol glucosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D S3902 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sfx01011]
D S3447 murA; UDP-N-glucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D S3690 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D S0090 murC; L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D S0087 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D S0084 murE; meso-diaminopimelate-adding enzyme K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D S0091 ddlB; D-alanine-D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D S0254 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D S1267 dadX; alanine racemase 2 K01775 alr; alanine racemase [EC:5.1.1.1]
D S3578 alr; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D S3695 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D S1271 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D S0086 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D S0089 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D S3303 bacA; bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D S0837 ybjG; hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D S1153 mviN; putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D S4348 mrcA; peptidoglycan synthetase, penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D S0144 mrcB; peptidoglycan synthetase; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D S0668 mrdA; peptidoglycan synthetase; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D S0083 ftsI; penicillin-binding protein 3; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D S0671 dacA; D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D S3440 dacB; D-alanyl-D-alanine carboxypeptidase, fraction B, penicillin-binding protein 4 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D S0259 yaiH; putative enzyme K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D S2348 pbpG; penicillin-binding protein 7 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D S2168 erfK; hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D S1840 ynhG; hypothetical protein K19234 ynhG; L,D-transpeptidase YnhG
D S0812 ybiS; hypothetical protein K19235 ybiS; L,D-transpeptidase YbiS
D S1197 ycfS; hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D S0986 ycbB; putative amidase K21470 ycbB; L,D-transpeptidase YcbB
D S2539 mepA; murein DD-endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D S1815 ydhO; putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D S0296 yafL; putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D S2391 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D S1932 yebA; hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D S4695 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D S3022 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D S2915 mltB; membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D S3163 mltC; membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D S0205 dniR; transcriptional regulator for nitrite reductase (cytochrome c552) K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D S1270 mltE; murein transglycosylase E K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D S2777 yfhD; putative periplasmic binding transport protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D S1181 yceG; putative thymidylate kinase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D S0670 rlpA; minor lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D S4592 amiB; N-acetylmuramoyl-l-alanine amidase II, murein hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D S2636 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D S3025 putative amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D S0863 putative regulator K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D S0109 ampD; AmpD protein K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D S1839 lpp; murein lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:sfx01004]
D S1176 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D S1175 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III; acetyl CoA ACP transacylase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D S2534 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D S1179 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D S1177 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D S1020 fabA; beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D S0173 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D S1375 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D S0403 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D S1342 yciA; hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D S0394 ybaW; hypothetical protein K12500 tesC; thioesterase III [EC:3.1.2.-]
D S1647 ydiD; putative ligase/synthetase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-]
D S1538 fadD; acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D S3222 hypothetical protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D S3567 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D S1174 plsX; PlsX protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D S3305 ygiH; hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D S3266 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:sfx01008]
D S0515 entB; 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D S0501 entD; enterochelin synthetase, component D K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D S0514 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D S0504 entF; ATP-dependent serine activating enzyme K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D S0517 ybdB; hypothetical protein K24147 entH; proofreading thioesterase EntH
C 01006 Prenyltransferases [BR:sfx01006]
D S0366 ispA; geranyltranstransferase (farnesyldiphosphate synthase) K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D S3445 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D S0167 yaeS; hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D S4594 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D S3739 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D S3566 ubiA; 4-hydroxybenzoate-octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D S0374 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:sfx01007]
D S2605 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D S0624 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D S0139 yadB; putative tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D S1794 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D S4360 trpS; tryptophan tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D S0465 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D S2007 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D S2303 metG; methionine tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D S0025 ileS; isoleucine tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D S4492 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D S0661 leuS; leucine tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D S3075 lysS; lysine tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D S1942 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D S0991 asnS; asparagine tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D S2732 hisS; histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D S4165 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D S4166 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D S0893 serS; serine tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D S0187 proS; proline tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D S1630 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D S2911 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D S1634 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D S1635 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D S0989 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D S4153 avtA; alanine-alpha-ketoisovalerate/valine-pyruvate transaminase C K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D S2501 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D S2583 putative aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D S3579 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D S0520 ybdL; putative aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D S2204 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D S4110 kbl; 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D S0767 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D S3226 putative class II aminotransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D S1779 malY; cystathionine beta-lyase; maltose regulon modulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D S4385 argD; acetylornithine delta-aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D S2874 gabT; GABA transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D S1389 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D S3320 ygjG; probable ornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D S0765 bioA; 7,8-diaminopelargonic acid synthetase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D S0149 hemL; glutamate-1-semialdehyde aminotransferase (aminomutase) K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D S3914 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D S0966 serC; 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D S2465 putative enzyme K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D S3895 wecE; putative regulator K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:sfx00194]
D S3957 atpC; membrane-bound ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D S3956 atpD; membrane-bound ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D S3955 atpG; membrane-bound ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D S3954 atpA; membrane-bound ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D S3953 atpH; membrane-bound ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D S3952 atpF; membrane-bound ATP synthase, F0 sector, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D S3951 atpE; membrane-bound ATP synthase, F0 sector, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D S3950 atpB; membrane-bound ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D S3949 atpI; membrane-bound ATP synthase K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:sfx03000]
D S2100 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D S0061 araC; transcriptional regulator for ara operon K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D S4647 hpaA; putative 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D S3765 rhaR; positive regulator for rhaRS operon K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D S3766 rhaS; positive regulator for rhaBAD operon K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D S3623 adiY; putative ARAC-type regulatory protein K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D S2638 yfeG; putative ARAC-type regulatory protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D S0475 envY; envelope protein K11920 envY; AraC family transcriptional regulator
D S3589 soxS; regulation of superoxide response regulon K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D S1690 marA; transcriptional activator of defense systems K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D S4699 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D S4171 yhiW; putative ARAC-type regulatory protein K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D S4172 yhiX; putative ARAC-type regulatory protein K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D S3625 melR; regulator of melibiose operon K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D S2427 ada; O6-methylguanine-DNA methyltransferase; transcription activator/repressor K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D S3017 gcvA; positive regulator of gcv operon K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D S3911 ilvY; ilvC positive regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D S3849 metR; regulator for metE and metH K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D S0019 nhaR; transcriptional activator of nhaA K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D S3701 oxyR; activator of hydrogen peroxide-inducible genes OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D S3101 iciA; replication initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D S0073 leuO; probable transcriptional activator for leuABCD operon K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D S2756 hcaR; transcriptional activator of hca cluster K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator
D S3370 tdcA; transcriptional activator of tdc operon K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D S0450 ybbS; putative transcriptional regulator LYSR-type K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D S1362 cysB; positive transcriptional regulator for cysteine regulon K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D S2165 cbl; transcriptional regulator cys regulon K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D S2166 nac; nitrogen assimilation control protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D S4447 yjiE; putative LYSR-type transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D S3498 yhcS; putative LYSR-type transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D S3306 ygiP; putative LYSR-type transcriptional regulator K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon
D S3921 yifA; hypothetical protein K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D S0836 deoR; Deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D S4473 putative deoR family transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D S4319 glpR; repressor of the glp operon K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D S2275 gatR; galactitol utilization operon repressor K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D S3381 agaR; putative DEOR-type transcriptional regulator of aga operon K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D S3014 fucR; positive regulator of the fuc operon K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D S2921 srlR; regulator for gut (srl), glucitol operon K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D S4616 yjfQ; putative DEOR-type transcriptional regulator K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D S3790 yihW; putative DEOR-type transcriptional regulator K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
D S2365 galS; mgl repressor, galactose operon inducer K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D S3045 galR; repressor of galETK operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D S3931 rbsR; regulator for rbs operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D S3735 cytR; regulator for deo operon, udp, cdd, tsx, nupC, and nupG K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D S0077 fruR; transcriptional repressor of fru operon and others K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D S4511 treR; repressor of treA,B,C K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D S2928 ascG; ascBF operon repressor K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D S1818 purR; transcriptional repressor for pur regulon, glyA, glnB, prsA, speA K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D S4302 gntR; regulator of gluconate (gnt) operon K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D S3322 ebgR; regulator of ebg operon K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D S1777 malI; repressor of malXY K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
D S3991 yidP; putative transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D S4369 yhfR; putative transcriptional regulator K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D S0580 farR; transcriptional regulator of succinyl CoA synthetase operon K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D S1264 fadR; negative regulator for fad regulon, and positive activator of fabA K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D S0112 pdhR; transcriptional regulator for pyruvate dehydrogenase complex K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D S3220 glcC; transcriptional activator for glc operon K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D S4452 uxuR; regulator for uxu operon K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D S3345 exuR; negative regulator of exu regulon, exuT, uxaAC, and uxuB K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D S4125 lldR; transcriptional regulator K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D S4002 yidW; regulator protein for dgo operon K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D S3479 yhcK; putative FADA-type transcriptional regulator K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D S1897 hypothetical protein K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D S2876 ygaE; putative transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D S1680 ydfH; hypothetical protein K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D S4658 yjjM; hypothetical protein K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
D S0416 acrR; acrAB operon repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D S4088 ttk; putative transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D S1086 ycdC; putative tet operon regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D S1807 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D S1772 uidR; repressor for uid operon K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D S4501 yjgJ; hypothetical protein K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D S1195 ycfQ; hypothetical protein K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D S3699 yijC; hypothetical protein K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D S0787 ybiH; putative transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D S0842 putative DEOR-type transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
D S3945 asnC; regulator for asnA, asnC and gidA K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D S0889 lrp; regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D S0398 ybaO; putative LRP-like transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D S2055 sdiA; transcriptional regulator of ftsQAZ gene cluster K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D S2090 rcsA; positive regulator for ctr capsule biosynthesis, positive transcription factor K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D S1107 csgD; probable csgAB operon transcriptional regulatory protein K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D S4226 yhiF; hypothetical protein K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator
D S4669 bglJ; 2-component transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D S4221 yhiE; hypothetical protein K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator
D S1691 marR; multiple antibiotic resistance protein, repressor of mar operon K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D S1801 slyA; transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D S2898 emrR; regulator of plasmid mcrB operon (microcin B17 synthesis) K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D S2956 putative transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D S0439 ybbI; putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D S3590 soxR; redox-sensing activator of soxS K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D S0621 fur; negative regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D S3572 yjbK; putative regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D S3646 iclR; repressor of aceBA operon K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D S0452 ybbU; putative regulator K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D S1514 putative regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D S4151 yiaJ; putative regulator K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
D S4387 crp; cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D S1434 fnr; global transcription regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D S2377 yeiL; putative transcriptional regulator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D S2750 hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D S4601 yjeB; hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D S4232 arsR; transcriptional repressor of chromosomal ars operon K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D S2708 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D S0810 putative toxin K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D S2628 yfeT; hypothetical protein K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D S1929 yebK; hypothetical protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D S3689 birA; biotin-[acetyl CoA carboxylase] holoenzyme synthetase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D S3516 fis; site-specific DNA inversion stimulation factor; DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D S4696 trpR; regulator for trp operon and aroH; trp aporepressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D S3446 nlp; regulatory factor of maltose metabolism K07724 ner; Ner family transcriptional regulator
D S2952 putative DNA-binding protein K07724 ner; Ner family transcriptional regulator
D S0066 yabN; putative transport protein K11925 sgrR; SgrR family transcriptional regulator
D S4693 nadR; probable nadAB transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D S1386 ycjC; hypothetical protein K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D S3329 ygjM; hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D S2923 ygaA; putative 2-component transcriptional regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D S2940 fhlA; formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons K15836 fhlA; formate hydrogenlyase transcriptional activator
D S0551 modE; molybdate uptake regulatory protein K02019 modE; molybdate transport system regulatory protein
D S4180 yiaG; hypothetical protein K07726 K07726; putative transcriptional regulator
D S4264 yhhG; hypothetical protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D S3731 metJ; repressor of all met genes but metF K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D S1670 relB; negative regulator of translation K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D S4040 bglG; positive regulation of bgl operon K03488 licT; beta-glucoside operon transcriptional antiterminator
D S3774 frvR; putative frv operon regulatory protein K18531 frvR; putative frv operon regulatory protein
D S2292 yohL; hypothetical protein K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D S0386 bolA; possible regulator of murein genes K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D S3834 rfaH; transcriptional activator K05785 rfaH; transcriptional antiterminator RfaH
D S3492 argR; repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism
D S0628 nagC; transcriptional repressor of nag (N-acetylglucosamine) operon K02565 nagC; N-acetylglucosamine repressor
D S1747 mlc; putative NAGC-like transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene
D S4133 mtlR; repressor for mtl K02562 mtlR; mannitol operon repressor
D S1412 tyrR; regulatory protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D S1390 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D S1393 pspC; putative regulator of phage shock response K03973 pspC; phage shock protein C
D S1708 ydeW; putative sorC family transcriptional regulator K11531 lsrR; lsr operon transcriptional repressor
D S1288 putative sensor-type regulator K05880 dhaR; transcriptional activator for dhaKLM operon
D S0534 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D S2722 hypothetical bacteriophage protein K07733 alpA; prophage regulatory protein
D S3190 hypothetical protein K07733 alpA; prophage regulatory protein
D S3143 yqgE; hypothetical protein K07735 algH; putative transcriptional regulator
D S0033 caiF; transcriptional regulator of cai operon K08277 caiF; transcriptional activator CaiF
D S0140 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D S0358 ybaD; hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D S0309 crl; transcriptional regulator of cryptic csgA gene for curli surface fibers K11926 crl; sigma factor-binding protein Crl
D S4320 rtcR; putative 2-component regulator K14414 rtcR; transcriptional regulatory protein RtcR
D S0919 putative regulator of cell division encoded by prophage CP-933O K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D S0080 yabB; hypothetical protein K03925 mraZ; transcriptional regulator MraZ
D S3268 hypothetical protein K07471 ygiV; probable transcriptional regulator
C 03021 Transcription machinery [BR:sfx03021]
D S4435 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D S3675 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D S3674 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D S4080 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D S3313 rpoD; sigmaD(70) factor of RNA polymerase K03086 rpoD; RNA polymerase primary sigma factor
D S2808 rpoE; sigma-E factor of RNA polymerase K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D S4284 rpoH; sigma(32) factor of RNA polymerase K03089 rpoH; RNA polymerase sigma-32 factor
D S3460 rpoN; sigma(54 or 60) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D S0056 hepA; probable ATP-dependent RNA helicase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D S3427 nusA; transcription pausing; L factor K02600 nusA; transcription termination/antitermination protein NusA
D S0361 nusB; transcription termination factor NusB K03625 nusB; transcription antitermination protein NusB
D S3680 nusG; component in transcription antitermination K02601 nusG; transcription termination/antitermination protein NusG
D S3484 sspA; regulator of transcription, stringent starvation protein A K03599 sspA; stringent starvation protein A
D S3483 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D S2807 rseA; sigma-E factor regulatory protein RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D S2806 rseB; sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D S2805 rseC; sigma-E factor K03803 rseC; sigma-E factor negative regulatory protein RseC
D S0140 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D S3439 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D S4338 greB; transcription elongation factor and transcript cleavage factor K04760 greB; transcription elongation factor GreB
D S3903 rho; transcription termination factor Rho, polarity suppressor K03628 rho; transcription termination factor Rho
D S0182 yaeO; hypothetical protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:sfx03019]
D S1168 rne; RNase E K08300 rne; ribonuclease E [EC:3.1.26.12]
D S3502 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D S2802 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D S4602 vacB; putative enzyme K12573 rnr; ribonuclease R [EC:3.1.13.1]
D S4584 yjeR; hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D S3906 rhlB; putative ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D S0788 rhlE; putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D S3420 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D S3855 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D S2988 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D S3422 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D S3903 rho; transcription termination factor Rho, polarity suppressor K03628 rho; transcription termination factor Rho
D S3753 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D S0014 dnaK; chaperone Hsp70; autoregulated heat shock protein K04043 dnaK; molecular chaperone DnaK
D S4564 mopA; GroEL, chaperone Hsp60, peptide-dependent ATPase, heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D S4595 hfq; host factor I for bacteriophage Q beta replication K03666 hfq; host factor-I protein
D S2694 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D S0138 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D S3038 ygdP; putative invasion protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D S2910 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D S3507 yhdA; hypothetical protein K18765 csrD; RNase E specificity factor CsrD
D S3740 menG; 2-demethylmenaquinone 2-C-methyltransferase K02553 rraA; regulator of ribonuclease activity A
D S4495 yjgD; hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D S3463 yhbJ; hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D S1472 hrpA; helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D S0143 hrpB; helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
D S2093 dsrA; antsense RNA silencer of rcsA gene K18502 dsrA; small regulatory RNA DsrA
D S2430 micF; regulatory antisense RNA K18513 micF; small regulatory RNA MicF
D S3000 csrB; CsrA-binding RNA K18515 csrB; small regulatory RNA CsrB
D S3812 spf; spot 42 RNA K18527 spf; small regulatory RNA Spot 42
D S3702 oxyS; regulatory RNA K18528 oxyS; small regulatory RNA OxyS
C 03041 Spliceosome
C 03011 Ribosome [BR:sfx03011]
D S0971 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D S0162 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D S4416 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D S4434 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D S4427 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D S4625 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D S4403 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D S4424 rpsH; 30S ribosomal subunit protein S8, and regulator K02994 RP-S8; small subunit ribosomal protein S8
D S3485 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D S4409 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D S4433 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D S4402 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D S4432 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D S4423 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D S3423 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D S2846 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D S4419 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D S4627 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D S4414 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D S0022 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D S3311 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D S3678 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D S4413 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D S4410 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D S4411 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D S4422 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D S4425 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D S4628 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D S3677 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D S3679 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D S3676 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D S3486 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D S4420 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D S4429 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D S4417 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D S4436 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D S4426 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D S2843 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D S1633 rplT; 50S ribosomal subunit protein L20/regulator K02887 RP-L20; large subunit ribosomal protein L20
D S3444 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D S4415 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D S4412 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D S4421 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D S3443 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D S4092 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D S4418 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D S4428 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D S3733 rpmE; 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D S1173 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D S4093 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D S4010 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D S1632 rpmI; 50S ribosomal subunit protein A K02916 RP-L35; large subunit ribosomal protein L35
D S4431 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D S2401 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D S0198 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S2823 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3528 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3530 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3653 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3691 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3821 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3925 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S0194 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S2826 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3534 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3656 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3694 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3825 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3928 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S0197 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S2824 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3531 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3654 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3692 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3822 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3926 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:sfx03009]
D S2802 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D S4584 yjeR; hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D S2801 era; GTP-binding protein K03595 era; GTPase
D S3441 yhbZ; putative GTP-binding factor K03979 obgE; GTPase [EC:3.6.5.-]
D S0140 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D S3427 nusA; transcription pausing; L factor K02600 nusA; transcription termination/antitermination protein NusA
D S0361 nusB; transcription termination factor NusB K03625 nusB; transcription antitermination protein NusB
D S3680 nusG; component in transcription antitermination K02601 nusG; transcription termination/antitermination protein NusG
D S2399 rsuA; 16S pseudouridylate 516 synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D S0050 ksgA; S-adenosylmethionine-6-N,N-adenosyl (rRNA) dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D S3545 sun; hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D S4674 yjjT; putative enzyme K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D S4280 yhhF; hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D S3141 yggJ; hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D S3948 gidB; glucose-inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D S0081 yabC; putative apolipoprotein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D S3404 yraL; hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D S4240 yhiQ; hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D S1519 yebH; putative enzyme K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D S4603 yjfH; hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D S3437 ftsJ; cell division protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D S0800 ybiN; hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D S3331 ygjO; putative enzyme K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D S0667 ybeA; hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D S1035 putative oxidoreductase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D S4238 yhiR; hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D S1014 ycbY; putative oxidoreductase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D S3015 ygdE; hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D S2735 yfgB; hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D S2992 ygcA; putative enzyme K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D S0855 ybjF; putative enzyme K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D S0055 yabO; hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D S1356 yciL; hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D S1170 yceC; hypothetical protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D S2829 sfhB; ftsH mutation suppressor K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D S1237 ymfC; hypothetical protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D S3635 yjbC; hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D S2816 yfiF; hypothetical protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D S4676 rimI; acyltransferase for 30S ribosomal subunit protein S18 K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D S1150 rimJ; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D S0848 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D S1491 rimL; ribosomal-protein-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D S2845 yfjA; hypothetical protein K02860 rimM; 16S rRNA processing protein RimM
D S0828 yliG; hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D S0964 ycaO; hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D S3514 prmA; methylase for 50S ribosomal subunit protein L11 K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D S2542 yfcB; putative adenine-specific methylase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D S1210 ycfD; hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D S1168 rne; RNase E K08300 rne; ribonuclease E [EC:3.1.26.12]
D S3502 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D S3144 yqgF; hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D S1447 dbpA; ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D S3420 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D S2811 srmB; ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D S4583 yjeQ; hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D S2729 putative GTP-binding factor K03977 engA; GTPase
D S4596 hflX; GTP-binding subunit of protease specific for phage lambda cII repressor K03665 hflX; GTPase
D S3538 yrdC; hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D S4079 spoT; (p)ppGpp synthetase II and guanosine-3,5-bis pyrophosphate 3-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D S3425 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D S3428 yhbC; hypothetical protein K09748 rimP; ribosome maturation factor RimP
D S0467 ybcJ; hypothetical protein K14761 rlbA; ribosome-associated protein
D S0666 ybeB; hypothetical protein K09710 ybeB; ribosome-associated protein
D S0645 ybeY; hypothetical protein K07042 ybeY; probable rRNA maturation factor
D S3438 yhbY; hypothetical protein K07574 yhbY; RNA-binding protein
D S4132 yibL; hypothetical protein K14762 yibL; ribosome-associated protein
D S4518 yjgA; putative alpha helix protein K09889 yjgA; ribosome-associated protein
D S1019 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D S3461 yhbH; probable sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D S2835 yfiA; putative yhbH sigma 54 modulator K05809 raiA; ribosome-associated inhibitor A
D S1290 ychF; putative GTP-binding protein K06942 ychF; ribosome-binding ATPase
D S1172 yceD; hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:sfx03016]
D S2481 elaC; hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D S3302 cca; tRNA nucleotidyl transferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D S4321 rtcB; hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D S2605 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D S0187 proS; proline tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D S0025 ileS; isoleucine tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D S0661 leuS; leucine tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D S2303 metG; methionine tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D S0624 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D S2007 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D S3075 lysS; lysine tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D S1942 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D S2911 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D S0991 asnS; asparagine tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D S1630 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D S0893 serS; serine tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D S0465 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D S4492 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D S2732 hisS; histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D S1634 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D S1635 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D S1794 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D S4360 trpS; tryptophan tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D S3787 yihZ; hypothetical protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D S1187 ycfF; hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D S3160 yggH; hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D S0188 yaeB; hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D S2529 truA; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D S3424 truB; tRNA pseudouridine 5S synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D S2961 ygbO; putative hydrogenase subunit K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D S2749 yfhO; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D S3538 yrdC; hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D S4594 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D S4013 thdF; GTP-binding protein in thiophene and furan oxidation K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D S3947 gidA; glucose-inhibited division protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D S1574 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D S4537 cysQ; ammonium transport system structural protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D S4011 rnpA; RNase P, protein component; protein C5 K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D S3375 rnpB; RNA component of RNase P K01978 rnpB; M1 RNA
D S1811 rnt; RNase T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D S4086 rph; RNase PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D S0535 rna; RNase I K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21]
D S1373 rnb; RNase II, mRNA degradation K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D S1539 rnd; RNase D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D S0142 yadP; hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D S4443 yjiI; hypothetical protein K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D S4694 yjjK; putative ATP-binding component of a transport system K06020 ettA; energy-dependent translational throttle protein EttA
D S4165 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D S4166 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D S0139 yadB; putative tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D S0433 ybaK; hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D S1552 yeaK; hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D S2778 yfhC; putative deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D S3574 yjbN; hypothetical protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D S3515 yhdG; putative dehydrogenase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D S2354 yohI; putative regulator protein K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D S0643 yleA; hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D S2001 yecO; hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D S2002 yecP; putative enzyme K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D S0981 smtA; S-adenosylmethionine-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D S4706 lasT; hypothetical protein K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D S3697 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D S2844 trmD; tRNA methyltransferase; tRNA (guanine-7-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D S2816 yfiF; hypothetical protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D S4078 spoU; putative RNA methylase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D S2751 putative ATP synthase beta subunit K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D S4123 yibK; hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D S2810 yfiC; putative enzyme K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D S2998 yqcB; hypothetical protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D S0055 yabO; hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D S1235 ycfB; hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D S1448 ydaO; hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D S4275 yhhP; hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D S4401 yheL; hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D S4400 yheM; hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D S4399 yheN; hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D S1037 yccK; putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D S2747 yfhF; putative regulator K13628 iscA; iron-sulfur cluster assembly protein
D S3083 ygfZ; hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D S2535 putative peptidase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D S0350 queA; probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D S0395 ybaX; hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D S2974 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D S2984 ygcF; hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D S3002 yqcD; hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D S4590 yjeS; hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D S0913 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D S0449 ybbB; putative capsule anchoring protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D S0351 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D S0368 yajK; putative oxidoreductase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D S0181 mesJ; cell cycle protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D S2667 ypfI; hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D S1536 yeaZ; hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D S3310 ygjD; putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D S4591 yjeE; hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D S3021 ygdL; putative enzyme K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D S4602 vacB; putative enzyme K12573 rnr; ribonuclease R [EC:3.1.13.1]
D S3422 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:sfx03012]
D S1369 yciH; hypothetical protein K03113 EIF1; translation initiation factor 1
D S3426 infB; protein chain initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D S1631 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D S4392 yheS; putative ATP-binding component of a transport system K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D S0163 tsf; protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D S4405 tufA; protein chain elongation factor EF-Tu (duplicate of tufB) K02358 tuf; elongation factor Tu
D S3682 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D S4404 fusA; GTP-binding protein chain elongation factor EF-G K02355 fusA; elongation factor G
D S4140 selB; selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor
D S1298 prfA; peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1
D S0165 frr; ribosome releasing factor K02838 frr; ribosome recycling factor
D S1299 hemK; possible protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D S1291 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D S0884 infA; protein chain initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D S4570 efp; elongation factor P (EF-P) K02356 efp; elongation factor P
D S2387 yeiP; putative elongation factor K02356 efp; elongation factor P
D S4578 yjeA; putative lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D S4569 yjeK; hypothetical protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D S2537 putative transporting ATPase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D S3076 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
D S4678 prfC; peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3
D S0305 prfH; probable peptide chain release factor K02839 prfH; peptide chain release factor
D S0184 yaeJ; hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:sfx03110]
D S0882 clpA; ATP-binding component of serine protease K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D S2831 clpB; heat shock protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D S0389 clpX; ATP-dependent specificity component of clpP serine protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D S3738 hslU; heat shock protein HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D S0425 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
D S0014 dnaK; chaperone Hsp70; autoregulated heat shock protein K04043 dnaK; molecular chaperone DnaK
D S2745 hscA; Hsp70 protein family heat shock protein, chaperone K04044 hscA; molecular chaperone HscA
D S4564 mopA; GroEL, chaperone Hsp60, peptide-dependent ATPase, heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D S0015 dnaJ; chaperone with DnaK; heat shock protein K03686 dnaJ; molecular chaperone DnaJ
D S1073 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D S0054 yabH; putative DNA-binding protein K05801 djlA; DnaJ like chaperone protein
D S2746 yfhE; hypothetical protein K04082 hscB; molecular chaperone HscB
D S4343 yrfI; hypothetical protein K04083 hslO; molecular chaperone Hsp33
D S2851 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D S3994 ibpA; heat shock protein K04080 ibpA; molecular chaperone IbpA
D S3993 ibpB; heat shock protein K04081 ibpB; molecular chaperone IbpB
D S4344 yrfH; hypothetical protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D S4563 mopB; GroES, 10 Kd chaperone K04078 groES; chaperonin GroES
D S0156 htrA; periplasmic serine protease Do, heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D S3436 ftsH; Zn metallo-peptidase, integral membrane cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D S3950 atpB; membrane-bound ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D S4463 fimC; periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D S4120 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB
D S3755 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D S1600 spy; periplasmic protein K06006 cpxP; periplasmic protein CpxP/Spy
D S3661 yjaI; hypothetical protein K07803 zraP; zinc resistance-associated protein
D S4223 hdeA; hypothetical protein K19777 hdeA; acid stress chaperone HdeA
D S4224 hdeB; hypothetical protein K19778 hdeB; acid stress chaperone HdeB
D S2935 hypA; HypA protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D S3239 hybF; hydrogenase-2 component K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D S2936 hypB; guanine-nucleotide binding protein K04652 hypB; hydrogenase nickel incorporation protein HypB
D S1744 putative oxidoreductase component K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D S4381 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D S0464 ppiB; peptidyl-prolyl cis-trans isomerase B (rotamase B) K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D S0392 ybaU; putative protease maturation protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D S4397 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D S0027 slpA; probable FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase) K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D S4395 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D S3909 ppiC; peptidyl-prolyl cis-trans isomerase C (rotamase C) K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D S0052 surA; survival protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D S3905 trxA; thioredoxin 1 K03671 TXN; thioredoxin
D S2817 trxC; putative thioredoxin-like protein K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D S0444 ybbN; putative thioredoxin-like protein K05838 ybbN; putative thioredoxin
D S0845 grxA; glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase K03674 grxA; glutaredoxin 1
D S1148 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2
D S4119 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D S1814 ydhD; hypothetical protein K07390 grxD; monothiol glutaredoxin
D S3816 dsbA; protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D S1262 dsbB; disulfide bond formation protein dsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D S3078 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D S4557 dsbD; thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D S2409 dsbE; disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D S0528 dsbG; thiol:disulfide interchange protein K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:sfx04131]
D S2736 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D S1559 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D S0557 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D S1930 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D S1838 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D S0425 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:sfx04121]
C 03051 Proteasome [BR:sfx03051]
D S0425 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:sfx03032]
D S0208 rnhA; RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D S2100 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D S3663 hupA; DNA-binding protein HU-alpha (HU-2) K05787 hupA; DNA-binding protein HU-alpha
D S0391 hupB; DNA-binding protein HU-beta, NS1 (HU-1) K03530 hupB; DNA-binding protein HU-beta
D S1636 himA; integration host factor (IHF), alpha subunit K04764 ihfA; integration host factor subunit alpha
D S0972 himD; integration host factor (IHF), beta subunit K05788 ihfB; integration host factor subunit beta
D S4009 dnaA; replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D S0723 putative helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D S3577 dnaB; replicative DNA helicase; part of primosome K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D S4662 dnaC; chromosome replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D S0722 putative replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D S3312 dnaG; DNA biosynthesis; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D S3584 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D S0177 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D S4008 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D S4491 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D S0663 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D S1183 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D S0209 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D S0422 dnaX; DNA polymerase III, tau and gamma subunits; DNA elongation factor III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D S4675 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D S1918 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D S0176 rnhB; RNAse HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D S3813 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D S2612 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D S4082 yicF; putative enzyme K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D S1764 tus; DNA-binding protein K10748 tus; DNA replication terminus site-binding protein
D S4357 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D S0617 seqA; negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D S2689 putative DNA replication factor K10763 hda; DnaA-homolog protein
D S2444 gyrA; DNA gyrase, subunit A, type II topoisomerase K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D S4006 gyrB; DNA gyrase subunit B, type II topoisomerase K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D S3267 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D S3275 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D S1361 topA; DNA topoisomerase type I, omega protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D S1575 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:sfx03036]
D S2100 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D S2802 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D S1323 hns; DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator K03746 hns; DNA-binding protein H-NS
D S2883 stpA; DNA-binding protein; H-NS-like protein K11685 stpA; DNA-binding protein StpA
D S3663 hupA; DNA-binding protein HU-alpha (HU-2) K05787 hupA; DNA-binding protein HU-alpha
D S0391 hupB; DNA-binding protein HU-beta, NS1 (HU-1) K03530 hupB; DNA-binding protein HU-beta
D S1636 himA; integration host factor (IHF), alpha subunit K04764 ihfA; integration host factor subunit alpha
D S0972 himD; integration host factor (IHF), beta subunit K05788 ihfB; integration host factor subunit beta
D S1073 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D S1072 yccD; hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D S4699 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D S4009 dnaA; replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D S3407 yraO; hypothetical protein K12961 diaA; DnaA initiator-associating protein
D S1034 yccV; hypothetical protein K11940 hspQ; heat shock protein HspQ
D S0805 dps; global regulator protein Dps K04047 dps; starvation-inducible DNA-binding protein
D S3516 fis; site-specific DNA inversion stimulation factor; DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D S4595 hfq; host factor I for bacteriophage Q beta replication K03666 hfq; host factor-I protein
D S3101 iciA; replication initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D S0889 lrp; regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D S2402 yejK; hypothetical protein K06899 ndpA; nucleoid-associated protein
D S0984 mukB; kinesin-like cell division protein K03632 mukB; chromosome partition protein MukB
D S0983 mukE; hypothetical protein K03804 mukE; chromosome partition protein MukE
D S0982 mukF; mukF protein (killing factor KICB) K03633 mukF; chromosome partition protein MukF
D S0093 ftsA; ATP-binding cell division protein K03590 ftsA; cell division protein FtsA
D S2964 hypothetical protein K05589 ftsB; cell division protein FtsB
D S4282 ftsE; ATP-binding component of a membrane-associated complex involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D S0083 ftsI; penicillin-binding protein 3; peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D S0890 ftsK; cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D S0082 ftsL; cell division protein; in growth of wall at septum K03586 ftsL; cell division protein FtsL
D S3736 ftsN; essential cell division protein K03591 ftsN; cell division protein FtsN
D S0092 ftsQ; cell division protein K03589 ftsQ; cell division protein FtsQ
D S0088 ftsW; membrane protein K03588 ftsW; cell division protein FtsW
D S4283 ftsX; cell division membrane protein K09811 ftsX; cell division transport system permease protein
D S0094 ftsZ; tubulin-like GTP-binding protein and GTPase K03531 ftsZ; cell division protein FtsZ
D S2613 zipA; cell division protein involved in FtsZ ring K03528 zipA; cell division protein ZipA
D S3095 ygfE; hypothetical protein K09888 zapA; cell division protein ZapA
D S3741 yiiU; hypothetical protein K09892 zapB; cell division protein ZapB
D S1012 ycbW; hypothetical protein K18657 zapC; cell division protein ZapC
D S0101 yacF; hypothetical protein K18778 zapD; cell division protein ZapD
D S3487 yhcM; hypothetical protein K06916 zapE; cell division protein ZapE
D S4545 ytfB; hypothetical protein K07269 ytfB; cell division protein YtfB
D S4592 amiB; N-acetylmuramoyl-l-alanine amidase II, murein hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D S2636 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D S3025 putative amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D S0415 acrA; acriflavin resistance protein AcrA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D S1249 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D S1248 minD; cell division inhibitor K03609 minD; septum site-determining protein MinD
D S1247 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D S1024 sulA; inhibitor of cell division and ftsZ ring formation K13053 sulA; cell division inhibitor SulA
D S4088 ttk; putative transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D S0617 seqA; negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D S3506 mreB; regulator of ftsI, penicillin binding protein 3 K03569 mreB; rod shape-determining protein MreB and related proteins
D S3505 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D S3504 mreD; rod shape-determining protein K03571 mreD; rod shape-determining protein MreD
D S0669 mrdB; rod shape-determining membrane protein K05837 rodA; rod shape determining protein RodA
D S3267 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D S3275 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D S3947 gidA; glucose-inhibited division protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D S3948 gidB; glucose-inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D S3867 xerC; site-specific recombinase K03733 xerC; integrase/recombinase XerC
D S3079 xerD; site-specific recombinase K04763 xerD; integrase/recombinase XerD
D S2302 mrp; putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D S4383 fic; protein induced in stationary phase K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D S3811 yihA; hypothetical protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:sfx03400]
D S1435 ogt; O-6-alkylguanine-DNA/cysteine-protein methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D S0602 phrB; deoxyribodipyrimidine photolyase (photoreactivation) K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D S2815 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D S3161 mutY; adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D S1790 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D S0098 mutT; 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D S4089 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D S2427 ada; O6-methylguanine-DNA methyltransferase; transcription activator/repressor K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D S2426 alkB; alkylated DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D S2258 alkA; 3-methyl-adenine DNA glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D S4186 tag; 3-methyl-adenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D S4094 mutM; formamidopyrimidine DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D S0596 nei; endonuclease VIII and DNA N-glycosylase with an AP lyase activity K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D S1594 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D S2373 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D S3665 nfi; endonuclease V (deoxyinosine 3 endonuclease) K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D S3077 recJ; ssDNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D S2612 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D S4082 yicF; putative enzyme K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D S3813 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D S3583 uvrA; excision nuclease subunit A K03701 uvrA; excinuclease ABC subunit A
D S0770 uvrB; excision nuclease subunit B K03702 uvrB; excinuclease ABC subunit B
D S2052 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D S1602 putative excinuclease subunit K05984 cho; excinuclease Cho [EC:3.1.25.-]
D S3865 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D S3675 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D S3674 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D S4435 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D S4080 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D S1198 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D S2944 mutS; methyl-directed mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D S4593 mutL; enzyme in methyl-directed mismatch repair K03572 mutL; DNA mismatch repair protein MutL
D S3039 mutH; methyl-directed mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D S2193 sbcB; exonuclease I, 3 --> 5 specific; deoxyribophosphodiesterase K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D S2727 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D S0367 xseB; exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D S1920 hypothetical protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D S0177 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D S4008 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D S4491 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D S0663 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D S1183 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D S0209 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D S0422 dnaX; DNA polymerase III, tau and gamma subunits; DNA elongation factor III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D S4675 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D S1918 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D S3584 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D S4357 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D S2099 vsr; DNA mismatch endonuclease, patch repair protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D S3028 recB; DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D S3030 recC; DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D S3027 recD; DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D S2913 recA; DNA-dependent ATPase, DNA- and ATP-dependent coprotease K03553 recA; recombination protein RecA
D S1937 ruvA; Holliday junction helicase subunit B K03550 ruvA; holliday junction DNA helicase RuvA
D S1936 ruvB; Holliday junction helicase subunit A K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D S1939 ruvC; Holliday junction nuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D S2140 putative crossover junction endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D S1987 putative crossover junction endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D S1665 rus; endodeoxyribonuclease RUS (Holliday junction resolvase) K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D S3734 priA; primosomal protein N (factor Y), putative helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D S4626 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D S0419 priC; primosomal replication protein N K04067 priC; primosomal replication protein N''
D S4663 dnaT; primosomal protein i K02317 dnaT; DNA replication protein DnaT
D S0342 sbcC; ATP-dependent dsDNA exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50
D S0343 sbcD; ATP-dependent dsDNA exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D S4692 sms; probable ATP-dependent protease K04485 radA; DNA repair protein RadA/Sms
D S4007 recF; Rec protein K03629 recF; DNA replication and repair protein RecF
D S4077 recG; DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D S2800 recO; RecO protein K03584 recO; DNA repair protein RecO (recombination protein O)
D S0424 recR; recombination protein RecR K06187 recR; recombination protein RecR
D S2853 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D S0339 yaiD; hypothetical protein K03554 rdgC; recombination associated protein RdgC
D S2400 yejH; putative ATP-dependent helicase K19789 radD; DNA repair protein RadD
D S4487 yjgR; hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D S2444 gyrA; DNA gyrase, subunit A, type II topoisomerase K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D S4006 gyrB; DNA gyrase subunit B, type II topoisomerase K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D S1361 topA; DNA topoisomerase type I, omega protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D S3663 hupA; DNA-binding protein HU-alpha (HU-2) K05787 hupA; DNA-binding protein HU-alpha
D S0391 hupB; DNA-binding protein HU-beta, NS1 (HU-1) K03530 hupB; DNA-binding protein HU-beta
D S1955 putative exodeoxyribonuclease VIII K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-]
D S3516 fis; site-specific DNA inversion stimulation factor; DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D S1636 himA; integration host factor (IHF), alpha subunit K04764 ihfA; integration host factor subunit alpha
D S0972 himD; integration host factor (IHF), beta subunit K05788 ihfB; integration host factor subunit beta
D S3855 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D S1323 hns; DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator K03746 hns; DNA-binding protein H-NS
D S0300 dinP; damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D S1261 umuC; mutagenesis and repair protein K03502 umuC; DNA polymerase V
D S1260 umuD; mutagenesis and repair protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D S3569 lexA; regulator for SOS(lexA) regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
D S0057 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D S4084 dinD; DNA-damage-inducible protein K14623 dinD; DNA-damage-inducible protein D
D S1145 dinI; damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I
D S1946 hypothetical bacteriophage protein K12149 dinI; DNA-damage-inducible protein I
D S2328 DNA-damage-inducible protein K12149 dinI; DNA-damage-inducible protein I
D S2912 oraA; regulator, OraA protein K03565 recX; regulatory protein
D S4333 yhgA; hypothetical protein K01157 rpnA; recombination-promoting nuclease RpnA [EC:3.1.21.-]
D S2516 yfcI; hypothetical protein K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-]
D S0131 yadD; hypothetical protein K24088 rpnC; recombination-promoting nuclease RpnC [EC:3.1.21.-]
D S2459 yfaD; hypothetical protein K24090 rpnE; recombination-promoting nuclease RpnE
D S3908 rep; rep helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D S1030 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D S0790 dinG; probable ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D S1535 putative enzyme K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D S2449 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit, B1 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D S2889 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D S2450 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit, B2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D S2890 nrdF; ribonucleoside-diphosphate reductase 2, beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:sfx03029]
D S3426 infB; protein chain initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D S1631 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D S0163 tsf; protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D S4405 tufA; protein chain elongation factor EF-Tu (duplicate of tufB) K02358 tuf; elongation factor Tu
D S3682 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D S4404 fusA; GTP-binding protein chain elongation factor EF-G K02355 fusA; elongation factor G
D S2801 era; GTP-binding protein K03595 era; GTPase
D S1794 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D S0661 leuS; leucine tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D S1942 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D S2007 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D S0718 putative bacteriophage protein K17680 PEO1; twinkle protein [EC:5.6.2.3]
D S3584 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D S0170 yaeT; hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D S0014 dnaK; chaperone Hsp70; autoregulated heat shock protein K04043 dnaK; molecular chaperone DnaK
D S2851 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D S4564 mopA; GroEL, chaperone Hsp60, peptide-dependent ATPase, heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D S4563 mopB; GroES, 10 Kd chaperone K04078 groES; chaperonin GroES
D S0015 dnaJ; chaperone with DnaK; heat shock protein K03686 dnaJ; molecular chaperone DnaJ
D S2749 yfhO; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D S2746 yfhE; hypothetical protein K04082 hscB; molecular chaperone HscB
D S1814 ydhD; hypothetical protein K07390 grxD; monothiol glutaredoxin
D S2302 mrp; putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D S0374 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D S4012 yidC; 60 KD inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D S0425 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:sfx02000]
D S0974 msbA; ATP-binding transport protein; multicopy suppressor of htrB K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D S0399 mdlA; ATP-binding component of a transport system K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D S0400 mdlB; putative ATP-binding component of a transport system K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D S0886 cydC; ATP-binding component of cytochrome-related transport K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D S0887 cydD; ATP-binding component of cytochrome-related transport K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D S0879 ybjZ; putative ATP-binding component of a transport system K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D S2425 yojI; putative ATP-binding component of a transport system K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D S1015 uup; putative ATP-binding component of a transport system K15738 uup; ABC transport system ATP-binding/permease protein
D S2626 cysP; thiosulfate binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D S3752 sbp; periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D S2625 cysU; sulfate, thiosulfate transport system permease T protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D S2624 cysW; sulfate transport system permease W protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D S2623 cysA; ATP-binding component of sulfate permease A protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D S0549 modA; molybdate-binding periplasmic protein; permease K02020 modA; molybdate transport system substrate-binding protein
D S0548 modB; molybdate transport permease protein K02018 modB; molybdate transport system permease protein
D S0547 modC; ATP-binding component of molybdate transport K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D S0552 modF; ATP-binding component of molybdate transport system K05776 modF; molybdate transport system ATP-binding protein
D S0274 tauA; taurine transport system periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D S0272 tauC; taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D S0273 tauB; taurine ATP-binding component of a transport system K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D S1000 ycbO; hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D S0994 ycbE; putative ATP-binding component of a transport system K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D S0065 tbpA; thiamin-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D S0064 yabK; putative transport system permease protein K02063 thiP; thiamine transport system permease protein
D S0063 yabJ; putative ATP-binding component of a transport system K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D S1205 potD; spermidine/putrescine periplasmic transport protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D S1206 potC; spermidine/putrescine transport system permease K11070 potC; spermidine/putrescine transport system permease protein
D S1207 potB; spermidine/putrescine transport system permease K11071 potB; spermidine/putrescine transport system permease protein
D S1208 potA; ATP-binding component of spermidine/putrescine transport K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D S0850 potF; periplasmic putrescine-binding protein; permease protein K11073 potF; putrescine transport system substrate-binding protein
D S0853 potI; putrescine transport protein; permease K11074 potI; putrescine transport system permease protein
D S0852 potH; putrescine transport protein; permease K11075 potH; putrescine transport system permease protein
D S0851 potG; ATP-binding component of putrescine transport system K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D S1906 putative transport system permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D S2893 proX; glycine betaine/L-proline transport system permease protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D S2892 proW; glycine betaine/L-proline transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D S2891 proV; glycine betaine/L-proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D S2345 yehZ; putative transport system permease protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D S2344 yehY; putative transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D S2342 yehW; putative transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D S2343 yehX; putative ATP-binding component of a transport system K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D S1584 putative ATP-binding component of a transport system K05779 ynjD; putative thiamine transport system ATP-binding protein
D S3560 malE; periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D S3559 malF; part of maltose permease K10109 malF; maltose/maltodextrin transport system permease protein
D S3558 malG; part of maltose permease K10110 malG; maltose/maltodextrin transport system permease protein
D S3561 malK; ATP-binding component of transport system for maltose K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D S1407 ycjV; putative ATP-binding component of a transport system K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D S2038 araH; L-arabinose transport system permease protein K10538 araH; L-arabinose transport system permease protein
D S2039 araG; L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D S2364 mglB; galactose-binding transport protein; receptor for galactose taxis K10540 mglB; methyl-galactoside transport system substrate-binding protein
D S2362 mglC; methyl-galactoside transport system permease protein K10541 mglC; methyl-galactoside transport system permease protein
D S2363 mglA; ATP-binding component of methyl-galactoside transport and galactose taxis K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D S4159 xylF; xylose binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D S4157 xylH; putative xylose transporter, membrane component K10544 xylH; D-xylose transport system permease protein
D S4158 xylG; putative ATP-binding protein of xylose transport system K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D S2765 yphD; putative transport system permease protein K23546 yphD; sugar transport system permease protein
D S2766 yphE; putative ATP-binding component of a transport system K23547 yphE; sugar transport system ATP-binding protein
D S3934 rbsC; D-ribose high-affinity transport protein K10440 rbsC; ribose transport system permease protein
D S4523 ytfT; putative transport system permease protein K23509 ytfT; galactofuranose transport system permease protein
D S4525 ytfR; putative ATP-binding component of a transport system K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D S4292 ugpB; sn-glycerol 3-phosphate transport protein, periplasmic binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D S4293 ugpA; sn-glycerol 3-phosphate transport protein, integral membrane protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D S4294 ugpE; sn-glycerol 3-phosphate transport protein, integral membrane protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D S0443 ybbM; putative metal resistance protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D S0442 ybbL; putative ATP-binding component of a transport system K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D S1710 ydeY; putative transport system permease protein K10556 lsrC; AI-2 transport system permease protein
D S1711 ydeZ; putative transport system permease protein K10557 lsrD; AI-2 transport system permease protein
D S1709 putative ATP-binding component of a transport system K10558 lsrA; AI-2 transport system ATP-binding protein
D S3451 vpsC; cytoplasmic membrane protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D S3452 vpsB; integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D S3453 vpsA; putative ATP-binding component of a transport system K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D S3450 yrbC; hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D S3449 yrbB; hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D S1400 ycjO; putative binding-protein dependent transport protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D S1401 ycjP; putative transport system permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D S4045 pstS; high-affinity phosphate-specific transport protein; periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D S4044 pstC; high-affinity phosphate-specific transport protein, cytoplasmic membrane component K02037 pstC; phosphate transport system permease protein
D S4043 pstA; high-affinity phosphate-specific transport protein K02038 pstA; phosphate transport system permease protein
D S4042 pstB; ATP-binding component of high-affinity phosphate-specific transport system K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D S3612 phnD; periplasmic binding protein component of phosphonate transporter K02044 phnD; phosphonate transport system substrate-binding protein
D S3613 phnC; ATP-binding component of phosphonate transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D S2521 argT; lysine-, arginine-, ornithine-binding periplasmic protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D S2518 hisM; histidine transport, membrane protein M K10015 hisM; histidine transport system permease protein
D S2519 hisQ; histidine transport system permease protein K10016 hisQ; histidine transport system permease protein
D S2517 hisP; ATP-binding component of histidine transport K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D S2520 hisJ; histidine-binding periplasmic protein of high-affinity histidine transport system K10014 hisJ; histidine transport system substrate-binding protein
D S0804 glnH; periplasmic glutamine-binding protein; permease K10036 glnH; glutamine transport system substrate-binding protein
D S0803 glnP; glutamine transport protein GlnP K10037 glnP; glutamine transport system permease protein
D S0802 glnQ; ATP-binding component of glutamine high-affinity transport system K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D S0856 artJ; arginine 3rd transport system periplasmic binding protein K09996 artJ; arginine transport system substrate-binding protein
D S0859 artI; arginine 3rd transport system periplasmic binding protein K09997 artI; arginine transport system substrate-binding protein
D S0857 artM; arginine 3rd transport system permease protein K09998 artM; arginine transport system permease protein
D S0858 artQ; arginine 3rd transport system permease protein K09999 artQ; arginine transport system permease protein
D S0860 artP; ATP-binding component of 3rd arginine transport system K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D S0648 ybeJ; putative periplasmic binding transport protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D S0650 gltK; glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D S0649 gltJ; glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D S0651 gltL; ATP-binding protein of glutamate/aspartate transport system K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D S3521 yhdW; putative periplasmic binding transport protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D S3526 yhdY; putative transport system permease protein K09971 aapM; general L-amino acid transport system permease protein
D S3527 yhdZ; putative ATP-binding component of a transport system K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D S2057 yecS; putative transport system permease protein (former yecC) K10009 tcyB; L-cystine transport system permease protein
D S2056 yecC; putative ATP-binding component of a transport system K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D S4285 livJ; high-affinity amino acid transport protein, periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D S4287 livK; high-affinity leucine-specific transport protein, periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D S4288 livH; high-affinity branched-chain amino acid transport protein, membrane component K01997 livH; branched-chain amino acid transport system permease protein
D S4289 livM; high-affinity branched-chain amino acid transport protein, membrane component K01998 livM; branched-chain amino acid transport system permease protein
D S4290 livG; ATP-binding component of high-affinity branched-chain amino acid transport system K01995 livG; branched-chain amino acid transport system ATP-binding protein
D S4291 livF; ATP-binding component of leucine transport K01996 livF; branched-chain amino acid transport system ATP-binding protein
D S0190 yaeC; putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D S0191 yaeE; putative transport system permease protein K02072 metI; D-methionine transport system permease protein
D S0192 abc; ATP-binding component of a transporter K02071 metN; D-methionine transport system ATP-binding protein
D S1424 putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D S1330 oppA; periplasmic oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D S1331 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein
D S1332 oppC; oligopeptide transport permease protein K15582 oppC; oligopeptide transport system permease protein
D S1333 oppD; ATP-binding protein of oligopeptide ABC transport system K15583 oppD; oligopeptide transport system ATP-binding protein
D S1334 oppF; ATP-binding protein of oligopeptide ABC transport system K10823 oppF; oligopeptide transport system ATP-binding protein
D S4191 dppA; dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D S4192 dppB; dipeptide transport system permease protein 1 K12369 dppB; dipeptide transport system permease protein
D S4193 dppC; dipeptide transport system permease protein 2 K12370 dppC; dipeptide transport system permease protein
D S4194 dppD; putative ATP-binding component of dipeptide transport system K12371 dppD; dipeptide transport system ATP-binding protein
D S4195 dppF; putative ATP-binding component of dipeptide transport system K12372 dppF; dipeptide transport system ATP-binding protein
D S1381 sapA; peptide transport periplasmic protein K19226 sapA; cationic peptide transport system substrate-binding protein
D S1380 sapB; peptide transport permease protein K19227 sapB; cationic peptide transport system permease protein
D S1379 sapC; peptide transport permease protein K19228 sapC; cationic peptide transport system permease protein
D S1378 sapD; putative ATP-binding protein of peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein
D S1377 sapF; putative ATP-binding protein of peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein
D S4269 nikA; periplasmic binding protein for nickel K15584 nikA; nickel transport system substrate-binding protein
D S4268 nikB; transport of nickel, membrane protein K15585 nikB; nickel transport system permease protein
D S4267 nikC; transport of nickel, membrane protein K15586 nikC; nickel transport system permease protein
D S4266 nikD; ATP-binding protein of nickel transport system K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D S4265 nikE; ATP-binding protein of nickel transport system K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D S0823 putative transport protein K13889 gsiB; glutathione transport system substrate-binding protein
D S0824 putative transport system permease protein K13890 gsiC; glutathione transport system permease protein
D S0825 putative transport system permease protein K13891 gsiD; glutathione transport system permease protein
D S0822 putative ATP-binding component of a transport system K13892 gsiA; glutathione transport system ATP-binding protein
D S1873 putative transport protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D S1874 putative ATP-binding component of a transport system K02031 ddpD; peptide/nickel transport system ATP-binding protein
D S2393 yejA; hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein
D S2394 yejB; putative transport system permease protein K13894 yejB; microcin C transport system permease protein
D S2395 yejE; putative transport system permease protein K13895 yejE; microcin C transport system permease protein
D S2396 yejF; putative ATP-binding component of a transport system K13896 yejF; microcin C transport system ATP-binding protein
D S0147 fhuD; ferrichrome-iron transport protein FhuD K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D S0148 fhuB; ferrichrome-iron transport protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D S0146 fhuC; ATP-binding component of hydroxymate-dependent iron transport K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D S0512 fepB; ferric enterobactin (enterochelin) binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D S0510 fepD; ferric enterobactin (enterochelin) transport protein K23186 fepD; iron-siderophore transport system permease protein
D S0509 fepG; ferric enterobactin transport protein K23187 fepG; iron-siderophore transport system permease protein
D S0508 fepC; ATP-binding component of ferric enterobactin transport K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D S1280 putative ATP-binding protein of ABC transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D S1279 putative iron compound ABC transporter permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D S1278 putative ferric enterobactin transport ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D S0153 yadT; hypothetical protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D S1637 btuC; Vitamin B12 transport permease protein K06073 btuC; vitamin B12 transport system permease protein
D S1639 btuD; Vitamin B12 transport protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D S1933 yebL; putative adhesin K09815 znuA; zinc transport system substrate-binding protein
D S1935 yebI; hypothetical protein K09816 znuB; zinc transport system permease protein
D S1934 yebM; putative ATP-binding component of a transport system K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D S1964 sitA; Iron transport protein K11604 sitA; manganese/iron transport system substrate-binding protein
D S1966 sitC; Iron transport protein K11605 sitC; manganese/iron transport system permease protein
D S1967 sitD; Iron transport protein, inner membrane component K11606 sitD; manganese/iron transport system permease protein
D S1965 sitB; Iron transport protein, ATP-binding component K11607 sitB; manganese/iron transport system ATP-binding protein
D S3114 putative inner membrane protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D S3117 putative ATP-binding protein of ABC transport system K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D S3118 putative ATP-binding protein of ABC transport system K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D S4489 yjgP; hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D S3228 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D S4488 yjgQ; hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D S3227 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D S3459 yhbG; putative ATP-binding component of a transport system K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D S0783 ybhR; hypothetical protein K25180 ybhR; drug efflux transport system permease protein
D S0784 ybhS; hypothetical protein K25181 ybhS; drug efflux transport system permease protein
D S0785 ybhF; putative ATP-binding component of a transport system K25182 ybhF; drug efflux transport system ATP-binding protein
D S0786 putative membrane protein K25183 ybhG; membrane fusion protein YbhG
D S1200 ycfU; hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D S1202 ycfW; putative kinase K09808 lolC_E; lipoprotein-releasing system permease protein
D S1201 ycfV; putative ATP-binding component of a transport system K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D S2412 ccmD; heme exporter protein C K02196 ccmD; heme exporter protein D
D S2413 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D S2414 ccmB; heme exporter protein B, cytochrome c-type biogenesis protein K02194 ccmB; heme exporter protein B
D S2415 ccmA; ATP-binding protein of heme exporter A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D S4283 ftsX; cell division membrane protein K09811 ftsX; cell division transport system permease protein
D S4282 ftsE; ATP-binding component of a membrane-associated complex involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D S0127 yadH; hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D S4262 yhhJ; putative transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D S0126 yadG; putative ATP-binding component of a transport system K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D S0447 ybbA; putative ATP-binding component of a transport system K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D S1844 ynhD; putative ATP-binding component of a transport system K09013 sufC; Fe-S cluster assembly ATP-binding protein
D S2611 yfeH; putative cytochrome oxidase K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D S1823 ydhE; putative transport protein K26939 norM; MATE family, multidrug efflux pump
D S3570 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D S3138 galP; galactose:proton symporter, MFS family K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D S3049 araE; low-affinity L-arabinose transport system proton symport protein K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D S3557 xylE; xylose-proton symportor K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D S3010 fucP; fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D S2384 yeiO; putative transport K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D S0067 yabM; putative transport protein K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D S3164 nupG; permease protein for nucleosides K03289 nupG; MFS transporter, NHS family, nucleoside permease
D S2822 kgtP; alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D S3618 proP; low-affinity transport protein; proline permease II K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D S4188 yhjX; putative resistance protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D S3477 nanT; sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D S2996 putative transport protein K03535 gudP; MFS transporter, ACS family, glucarate transporter
D S3340 exuT; transport protein of hexuronates K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D S3998 dgoT; D-galactonate transport protein K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D S4648 hpaX; putative 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease
D S3379 yhaU; putative transport protein K12299 garP; MFS transporter, ACS family, probable galactarate transporter
D S4657 yjiZ; putative transport protein K23016 lgoT; MFS transporter, ACS family, L-galactonate transporter
D S1853 putative amino acid/amine transport protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D S1852 putative transport system permease protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D S1548 yeaN; putative amino acid/amine transport protein K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter
D S2755 hcaT; MFS (major facilitator superfamily) transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D S3973 uhpT; hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D S2455 glpT; sn-glycerol-3-phosphate permease K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D S3974 uhpC; regulator of uhpT K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D S1310 narK; nitrate transport protein nark K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D S1892 narU; nitrite extrusion protein 2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D S3043 ygeD; putative resistance proteins K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D S0511 ybdA; hypothetical membrane protein P43 K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter
D S0384 ampG; beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D S2398 bcr; bicyclomycin resistance protein; transmembrane protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D S3980 emrD; multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D S0341 araJ; putative transport protein AraJ K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein
D S1693 ydeA; putative resistance / regulatory protein K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D S0838 cmr; chloramphenicol resistance pump Cmr K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D S1149 yceL; hypothetical protein K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D S4019 yidY; putative transport protein K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein
D S3969 yicM; putative transport protein K03445 nepI; MFS transporter, DHA1 family, purine ribonucleoside efflux pump
D S1817 putative transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D S2900 emrB; multidrug resistant protein emrB K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D S1513 putative transport protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D S2267 yegB; putative transport protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D S2571 emrY; multidrug resistance protein Y K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein
D S0431 fsr; fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D S3802 yihN; putative resistance protein K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D S0898 ycaD; putative transport protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D S4380 yhfC; putative transport protein K06141 tsgA; MFS transporter, TsgA protein
D S0044 yaaU; putative transport protein K08368 yaaU; MFS transporter, putative metabolite transport protein
D S2980 ygcS; putative transport protein K08368 yaaU; MFS transporter, putative metabolite transport protein
D S1569 ydjE; putative transport protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D S1563 putative transport protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D S2617 ptsI; PEP-protein phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D S3037 ptsP; PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins) K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D S2616 ptsH; PTS system protein HPr K02784 ptsH; phosphocarrier protein HPr
D S3464 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D S2588 putative PTS system enzyme IIA component, enzyme I K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-]
D S2383 fruB; PTS system, fructose-specific IIA/fpr component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D S2618 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D S1185 ptsG; glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D S0625 nagE; N-acetylglucosamine-specific enzyme IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D S1778 malX; phosphotransferase system enzyme II K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D S4039 bglF; PTS system beta-glucosides, enzyme II, cryptic K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D S4512 treB; PTS system enzyme II K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D S2630 putative PTS enzyme II K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D S2381 fruA; PTS system, fructose-specific transport protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D S3771 frvA; PTS system, fructose-specific IIA component K11201 frvA; fructose-like PTS system EIIA component [EC:2.7.1.-]
D S2592 putative PTS system enzyme IIB component K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D S3716 frwD; PTS system fructose-like IIB component 2 K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D S3719 frwB; PTS system fructose-like IIB component 1 K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D S2591 putative transport protein K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D S3720 frwC; PTS system, fructose-like enzyme II component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D S3772 frvB; PTS system, fructose-like enzyme IIBC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D S4135 mtlA; PTS system, mannitol-specific enzyme IIABC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D S0579 hrsA; protein modification enzyme K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195]
D S1607 celC; PEP-dependent phosphotransferase enzyme III for cellobiose, arbutin, and salicin K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D S1605 celA; PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D S2918 srlB; PTS system, glucitol/sorbitol-specific enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D S2917 srlE; PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D S2282 gatA; galactitol-specific enzyme IIA of phosphotransferase system K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D S2281 gatB; galactitol-specific enzyme IIB of phosphotransferase system K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D S2280 gatC; PTS system galactitol-specific enzyme IIC K02775 gatC; galactitol PTS system EIIC component
D S1526 manX; PTS enzyme IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D S1525 manY; PTS enzyme IIC K02795 manY; mannose PTS system EIIC component
D S1524 manZ; PTS enzyme IID K02796 manZ; mannose PTS system EIID component
D S3638 sorF; putative sorbose-permease PTS system IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D S3639 sorB; putative sorbose-permease PTS system IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D S3640 sorA; putative sorbose-permease PTS system IIC component K02814 sorA; sorbose PTS system EIIC component
D S3641 sorM; putative sorbose-permease PTS system IID component K02815 sorM; sorbose PTS system EIID component
D S3386 agaF; putative transport enzyme subunit K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D S3383 agaV; cytoplasmic transport protein N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D S3384 agaW; N-acetylgalactosameine-specific IIC component 2 K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D S3385 agaE; putative transport enzyme subunit K02747 agaE; N-acetylgalactosamine PTS system EIID component
D S3391 agaC; N-acetylgalactosamine-specific transport IIC component 1 K10985 agaC; galactosamine PTS system EIIC component
D S3392 agaD; N-acetylglucosamine transport enzyme IID component 1 K10986 agaD; galactosamine PTS system EIID component
D S4620 ptxA; putative PTS system enzyme II A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D S4619 sgaB; hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D S4618 sgaT; hypothetical protein K03475 ulaA; ascorbate PTS system EIIC component
D S3462 ptsN; phosphotransferase system enzyme IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D S1285 ycgC; putative PTS system enzyme I K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D S0873 aqpZ; transmembrane water channel AqpZ protein K06188 aqpZ; aquaporin Z
D S3742 glpF; glycerol diffusion facilitator protein K02440 glpF; glycerol uptake facilitator
D S1337 kch; putative potassium channel protein K10716 kch; voltage-gated potassium channel
D S0402 amtB; probable ammonium transporter K03320 amt; ammonium transporter, Amt family
D S1792 gst; glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D S0831 yliJ; putative transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D S2512 yfcF; hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D S3484 sspA; regulator of transcription, stringent starvation protein A K03599 sspA; stringent starvation protein A
D S1038 yccA; putative carrier/transport protein K19416 yccA; modulator of FtsH protease
D S0963 focA; probable formate transporter (formate channel 1) K06212 focA; formate transporter
D S4377 nirC; nitrite reductase, NirC protein K02598 nirC; nitrite transporter
D S0417 aefA; putative alpha helix protein K05802 mscK; potassium-dependent mechanosensitive channel
D S4581 yjeP; putative periplasmic binding protein K22051 mscM; miniconductance mechanosensitive channel
D S3109 yggB; putative transport protein K03442 mscS; small conductance mechanosensitive channel
D S1425 hypothetical protein K16052 ynaI; MscS family membrane protein
D S0492 ybdG; putative transport protein K16053 ybdG; miniconductance mechanosensitive channel
D S2030 motA; proton conductor component of motor K02556 motA; chemotaxis protein MotA
D S2029 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D S0298 mbhA; putative motility protein K02557 motB; chemotaxis protein MotB
D S3254 exbB; enterochelin transporter (uptake) K03561 exbB; biopolymer transport protein ExbB
D S3253 exbD; enterochelin transporter (uptake) K03559 exbD; biopolymer transport protein ExbD
D S0573 tolQ; inner membrane protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D S0572 tolR; putative inner membrane protein K03560 tolR; biopolymer transport protein TolR
D S3861 corA; Mg2+ transport, system I K03284 corA; magnesium transporter
D S1446 hypothetical protein K16074 zntB; zinc transporter
D S0679 crcB; hypothetical protein K06199 crcB; fluoride exporter
D S1701 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D S4533 ytfL; putative transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D S2850 yfjD; putative transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D S0990 ompF; outer membrane protein 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
D S2105 putative outer membrane pore protein K09476 ompF; outer membrane pore protein F
D S0310 phoE; outer membrane pore protein E (E,Ic,NmpAB) K11929 phoE; outer membrane pore protein E
D S2429 ompC; outer membrane protein 1b (Ib;c) K09475 ompC; outer membrane pore protein C
D S2073 nmpC; putative outer membrane porin protein C precurser K16076 nmpC; outer membrane porin protein LC
D S1887 putative outer membrane porin protein K16076 nmpC; outer membrane porin protein LC
D S3562 lamB; maltose high-affinity receptor, phage lambda receptor protein K02024 lamB; maltoporin
D S4035 yieC; putative receptor protein K10124 bglH; carbohydrate-specific outer membrane porin
D S1023 ompA; outer membrane protein 3a (II*;G;d) K03286 TC.OOP; OmpA-OmpF porin, OOP family
D S0807 ompX; outer membrane protein X K11934 ompX; outer membrane protein X
D S2557 fadL; transport of long-chain fatty acids K06076 fadL; long-chain fatty acid transport protein
D S0356 tsx; outer membrane protein Tsx K05517 tsx; nucleoside-specific channel-forming protein
D S1006 ycbS; putative outer membrane protein K07347 fimD; outer membrane usher protein
D S4048 lpfC; putative long polar fimbriae K07347 fimD; outer membrane usher protein
D S2296 yehB; putative outer membrane protein K07347 fimD; outer membrane usher protein
D S4254 probable fimbrial protein remnant K07347 fimD; outer membrane usher protein
D S1242 hypothetical protein K12678 aidA-I; autotransporter family porin
D S3178 pic; serine protease precurser K12684 esp; serine protease autotransporter [EC:3.4.21.-]
D S4824 sigA; serine protease K12684 esp; serine protease autotransporter [EC:3.4.21.-]
D S3195 outer membrane fluffing protein K12687 flu; antigen 43
D S0502 fepA; ferrienterobactin receptor precursor K19611 fepA; ferric enterobactin receptor
D S3696 btuB; outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23 K16092 btuB; vitamin B12 transporter
D S0145 fhuA; outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80 K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D S4052 iutA; putative ferric siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D S0481 ylcB; putative resistance protein K07796 cusC; outer membrane protein, copper/silver efflux system
D S3280 tolC; outer membrane channel TolC K12340 tolC; outer membrane protein
D S3607 yjcP; putative enzyme K15550 mdtP; outer membrane protein, multidrug efflux system
D S1052 yccZ; BexD-like protein K01991 wza; polysaccharide biosynthesis/export protein
D S2250 wza; putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D S1769 uidC; membrane-associated protein K16140 uidC; putative glucuronide porin
D S0170 yaeT; hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D S2730 putative dehydrogenase K17713 bamB; outer membrane protein assembly factor BamB
D S2670 nlpB; lipoprotein-34 K07287 bamC; outer membrane protein assembly factor BamC
D S2828 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D S2854 smpA; small membrane protein A K06186 bamE; outer membrane protein assembly factor BamE
D S4531 ytfM; hypothetical protein K07278 tamA; translocation and assembly module TamA
D S4530 ytfN; hypothetical protein K09800 tamB; translocation and assembly module TamB
D S4468 yjhA; hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein
D S3458 yhbN; hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D S3457 yrbK; hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D S0053 imp; organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D S0662 rlpB; minor lipoprotein K03643 lptE; LPS-assembly lipoprotein
D S0646 ybeX; putative transport protein K06189 corC; hemolysin (HlyC) family protein
D S2355 yohJ; hypothetical protein K06518 cidA; holin-like protein
D S3627 melB; melibiose permease II K11104 melB; melibiose permease
D S0491 pheP; phenylalanine transport protein pheP K11732 pheP; phenylalanine-specific permease
D S2370 lysP; lysine-specific permease K11733 lysP; lysine-specific permease
D S0111 aroP; aromatic amino acid transport protein K11734 aroP; aromatic amino acid transport protein AroP
D S2875 gabP; transport permease protein of gamma-aminobutyrate K11735 gabP; GABA permease
D S0347 proY; proline permease transport protein K11736 proY; proline-specific permease ProY
D S4543 cycA; transport protein for D-alanine, D-serine, and glycine K11737 cycA; D-serine/D-alanine/glycine transporter
D S1383 ycjJ; putative amino acid/amine transport protein K14052 puuP; putrescine importer
D S0615 potE; putrescine transport protein K03756 potE; putrescine:ornithine antiporter
D S4552 transport of lysine/cadaverine K03757 cadB; cadaverine:lysine antiporter
D S1758 putative arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D S3622 yjdE; putative amino acid/amine transport protein K03759 adiC; arginine:agmatine antiporter
D S1868 xasA; acid sensitivity protein, putative transporter K20265 gadC; glutamate:GABA antiporter
D S2649 putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D S4562 yjeH; putative transport protein K16263 yjeH; amino acid efflux transporter
D S0560 ybgR; putative transport system permease protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D S3754 yiiP; putative transport system permease protein K13283 fieF; ferrous-iron efflux pump FieF
D S3285 ygiE; hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family
D S0490 ybdE; putative inner membrane component for iron transport K07787 cusA; copper/silver efflux system protein
D S0414 acrB; acriflavine resistance protein K18138 acrB; multidrug efflux pump
D S2663 acrD; multidrug resistance protein K18324 acrD; multidrug efflux pump
D S2266 yegO; hypothetical protein K07789 mdtC; multidrug efflux pump
D S4821 resistance protein K03297 emrE; small multidrug resistance pump
D S4571 sugE; suppresser of groEL K11741 sugE; quaternary ammonium compound-resistance protein SugE
D S1752 possible chaperone K11742 mdtI; spermidine export protein MdtI
D S1753 possible chaperone K11743 mdtJ; spermidine export protein MdtJ
D S1688 ydeD; hypothetical protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D S0806 ybiF; putative transmembrane protein subunit K11939 rhtA; inner membrane transporter RhtA
D S3858 rarD; hypothetical protein K05786 rarD; chloramphenicol-sensitive protein RarD
D S1902 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D S2567 sucrose-6 phosphate hydrolase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D S1719 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D S4455 gntP; gluconate transport system permease 3 K16321 gntP; high-affinity gluconate transporter
D S4327 gntT; high-affinity transport permease for gluconate K06155 gntT; Gnt-I system high-affinity gluconate transporter
D S4304 gntU; low-affinity gluconate transport permease protein K06156 gntU; Gnt-I system low-affinity gluconate transporter
D S3762 kdgT; 2-keto-3-deoxy-D-gluconate transport protein K02526 kdgT; 2-keto-3-deoxygluconate permease
D S4559 dcuA; anaerobic dicarboxylate transport protein K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D S3630 dcuB; anaerobic dicarboxylate transport K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D S4126 lldP; L-lactate permease K00427 lldP; L-lactate permease
D S3215 yghK; putative permease K02550 glcA; glycolate permease
D S0039 caiT; probable carnitine transporter K05245 caiT; L-carnitine/gamma-butyrobetaine antiporter
D S1493 tehA; Tellurite resistance protein TehA K03304 tehA; tellurite resistance protein
D S1303 chaA; sodium-calcium/proton antiporter K07300 chaA; Ca2+:H+ antiporter
D S3454 yrbG; hypothetical protein K07301 yrbG; cation:H+ antiporter
D S3235 pitB; low-affinity phosphate transport protein K16322 pit; low-affinity inorganic phosphate transporter
D S4244 pitA; low-affinity phosphate transport protein K16322 pit; low-affinity inorganic phosphate transporter
D S3513 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D S3594 yjcG; putative transport protein K14393 actP; cation/acetate symporter
D S3604 gltP; glutamate-aspartate symport protein K11102 gltP; proton glutamate symport protein
D S4207 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D S3336 ygjU; putative transport protein K07862 sstT; serine/threonine transporter
D S4076 gltS; glutamate transport protein K03312 gltS; glutamate:Na+ symporter, ESS family
D S0018 nhaA; Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D S1263 nhaB; Na+/H+ antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D S3592 yjcE; hypothetical protein K24163 nhaK; monovalent cation/hydrogen antiporter
D S1269 hypothetical protein K11105 cvrA; potassium/hydrogen antiporter
D S0046 kefC; K+ efflux antiporter K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D S0045 yabF; putative NAD(P)H oxidoreductase K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D S4394 kefB; K+ efflux; NEM-activable K+/H+ antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D S4393 yheR; putative NAD(P)H oxidoreductase K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D S0430 ybaL; putative transport protein K26735 KEA4_5_6; K+:H+ antiporter
D S3827 trkH; potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D S3546 trkA; transport protein for potassium K03499 trkA; trk/ktr system potassium uptake protein
D S2690 uraA; uracil transport protein K02824 uraA; uracil permease
D S1079 ycdG; putative transport protein K09016 rutG; putative pyrimidine permease RutG
D S3073 ygfU; putative permease K24206 uacT; uric acid transporter
D S4075 yicE; putative transport protein K16345 xanP; xanthine permease XanP
D S3591 yjcD; hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D S3971 yicO; hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D S4026 yieG; putative membrane / transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D S2598 nupC; permease of transport system for 3 nucleosides K11535 nupC; nucleoside transport protein
D S2378 yeiM; putative transport system permease protein K16324 psuT; putative pseudouridine transporter
D S2375 yeiJ; putative transport system permease protein K16325 nupX; nucleoside permease
D S2046 tyrP; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D S3419 mtr; tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein
D S4018 tnaB; low-affinity tryptophan permease K03836 tnaB; low affinity tryptophan permease
D S3005 sdaC; probable serine transporter K03837 sdaC; serine transporter
D S3368 tdcC; anaerobically inducible permease for L-threonine and L-serine K03838 tdcC; threonine transporter
D S4196 yhjV; putative transporter protein K26603 yhjV; inner membrane transport protein
D S3361 yhaO; putative transport system permease protein K26604 cyuP; cysteine uptake transport protein
D S3309 ygjE; hypothetical protein K11106 ttdT; L-tartrate/succinate antiporter
D S0150 yadQ; putative channel transporter K03281 clcA; chloride channel protein, CIC family
D S1745 putative chloride channel protein K03281 clcA; chloride channel protein, CIC family
D S2594 hypothetical protein K03281 clcA; chloride channel protein, CIC family
D S1293 ychM; hypothetical protein K03321 TC.SULP; sulfate permease, SulP family
D S2597 mntH; putative transport system permease K03322 mntH; manganese transport protein
D S4145 putative membrane protein K21393 yiaN; TRAP-type transport system large permease protein
D S3644 yjbB; putative alpha helix protein K03324 yjbB; phosphate:Na+ symporter
D S4233 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D S2711 putative sodium bile acid symporter family protein K03325 ACR3; arsenite transporter
D S0682 dcuC; C4-dicarboxylate anaerobic carrier DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D S3482 yhcL; putative transport protein K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D S3894 wzxE; putative cytochrome K16693 wzxE; enterobacterial common antigen flippase
D S2232 wzxC; probable export protein K16695 wzxC; lipopolysaccharide exporter
D S1153 mviN; putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D S3940 kup; low-affinity potassium transport protein K03549 kup; KUP system potassium uptake protein
D S3108 yggA; hypothetical protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D S3853 yigK; hypothetical protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D S3854 yigJ; hypothetical protein K05835 rhtC; threonine efflux protein
D S2813 yfiK; hypothetical protein K11249 eamB; cysteine/O-acetylserine efflux protein
D S2896 hypothetical protein K26605 azlC; branched chain amino acid efflux pump
D S2897 ygaH; hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D S3495 yhcP; hypothetical protein K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D S2587 yjcQ; putative enzyme K15547 mdtO; multidrug resistance protein MdtO
D S2686 perM; putative permease K03548 perM; putative permease
D S4274 yhhQ; hypothetical protein K09125 yhhQ; queuosine precursor transporter
D S1692 ydeB; hypothetical protein K05595 marC; multiple antibiotic resistance protein
D S0088 ftsW; membrane protein K03588 ftsW; cell division protein FtsW
D S1520 hypothetical protein K23242 mntP; manganese efflux pump family protein
D S1089 putative cytochrome K07243 FTR; high-affinity iron transporter
D S1090 ycdO; hypothetical protein K07224 efeO; iron uptake system component EfeO
D S1091 ycdB; hypothetical protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D S4642 yjiY; putative carbon starvation protein K23676 btsT; pyruvate/proton symporter
D S1341 tonB; membrane protein, energy transducer K03832 tonB; periplasmic protein TonB
D S0569 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D S0571 tolA; membrane spanning protein K03646 tolA; colicin import membrane protein
D S0570 tolB; periplasmic protein K03641 tolB; TolB protein
D S1311 narG; nitrate reductase 1 alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D S1312 narH; nitrate reductase 1, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D S1314 narI; nitrate reductase 1, cytochrome b(NR), gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D S1884 fdnG; formate dehydrogenase-N, nitrate-inducible, alpha subunit K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D S1883 fdnH; formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit K08349 fdnH; formate dehydrogenase-N, beta subunit
D S1882 fdnI; formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit
D S1743 putative DMSO reductase anchor subunit K07312 ynfH; Tat-targeted selenate reductase subunit YnfH
D S1742 putative oxidoreductase, Fe-S subunit K07311 ynfG; Tat-targeted selenate reductase subunit YnfG
D S0894 dmsA; anaerobic dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D S0895 dmsB; anaerobic dimethyl sulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D S0896 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D S1066 torC; trimethylamine N-oxide reductase, cytochrome c-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D S2004 yecK; putative cytochrome C-type protein K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D S2003 bisZ; biotin sulfoxide reductase 2 K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D S4184 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D S1830 ydhU; hypothetical protein K08354 phsC; thiosulfate reductase cytochrome b subunit
D S1439 putative secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D S3608 yjcR; putative membrane protein K15549 mdtN; membrane fusion protein, multidrug efflux system
D S4169 hypothetical protein K18898 mdtE; membrane fusion protein, multidrug efflux system
D S0415 acrA; acriflavin resistance protein AcrA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D S0550 hypothetical protein K25859 acrZ; accessory protein, multidrug efflux pump
D S0878 putative membrane protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D S3496 yhcQ; putative membrane protein K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D S2248 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D S0561 pnuC; PnuC protein K03811 pnuC; nicotinamide mononucleotide transporter
D S4336 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D S4335 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D S4334 yhgG; hypothetical protein K07490 feoC; ferrous iron transport protein C
D S0258 sbmA; possible envelope protein K17938 sbmA; peptide/bleomycin uptake transporter
D S4243 yhiO; hypothetical protein K06144 uspB; universal stress protein B
D S2410 ccmF; cytochrome c-type biogenesis protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D S2114 hypothetical protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D S1917 hypothetical protein K07156 copC; copper resistance protein C
D S1556 yeaF; hypothetical protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:sfx02044]
D S3280 tolC; outer membrane channel TolC K12340 tolC; outer membrane protein
D S3146 yggR; putative transport protein K02669 pilT; twitching motility protein PilT
D S3211 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D S3033 ppdB; prepilin peptidase dependent protein B K02680 ppdB; prepilin peptidase dependent protein B
D S3031 ppdC; prepilin peptidase dependent protein C K02681 ppdC; prepilin peptidase dependent protein C
D S0107 ppdD; prelipin peptidase dependent protein K02682 ppdD; prepilin peptidase dependent protein D
D S0105 hofC; putative integral membrane protein K02505 hofC; protein transport protein HofC
D S4349 yrfD; hypothetical protein K12288 hofM; pilus assembly protein HofM
D S4350 yrfC; hypothetical protein K12289 hofN; pilus assembly protein HofN
D S4351 yrfB; hypothetical protein K12290 hofO; pilus assembly protein HofO
D S4353 hofQ; putative transport portein K02507 hofQ; protein transport protein HofQ
D S3147 yggT; putative resistance protein K02221 yggT; YggT family protein
D S0393 ybaV; hypothetical protein K02237 comEA; competence protein ComEA
D S0299 fhiA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D S2014 flhB; putative part of export apparatus for flagellar proteins K02401 flhB; flagellar biosynthesis protein FlhB
D S2079 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D S2080 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D S2085 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D S2086 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D S2088 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D S2089 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D S3078 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D S2718 trbJ; putative mating pair formation protein K20266 trbJ; type IV secretion system protein TrbJ
D S2716 trbL; putative mating pair formation protein K07344 trbL; type IV secretion system protein TrbL
D S1242 hypothetical protein K12678 aidA-I; autotransporter family porin
D S3178 pic; serine protease precurser K12684 esp; serine protease autotransporter [EC:3.4.21.-]
D S4824 sigA; serine protease K12684 esp; serine protease autotransporter [EC:3.4.21.-]
D S3195 outer membrane fluffing protein K12687 flu; antigen 43
D S0213 safB; periplasmic chaperone of fimbral assembly machinery K11895 impH; type VI secretion system protein ImpH
D S0214 safC; outer membrane usher protein K11896 impG; type VI secretion system protein ImpG
D S0215 putative cytoplasmic protein K11897 impF; type VI secretion system protein ImpF
D S0211 safA; putative cytoplasmic protein K11902 impA; type VI secretion system protein ImpA
D S0284 rhsG; putative Rhs-family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D S0217 sat1; putative cytoplasmic protein K11898 impE; type VI secretion system protein ImpE
D S4465 fimA; major type 1 subunit fimbrin (pilin) K07345 fimA; major type 1 subunit fimbrin (pilin)
D S3961 lpfA; putative major fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D S4463 fimC; periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D S1006 ycbS; putative outer membrane protein K07347 fimD; outer membrane usher protein
D S4048 lpfC; putative long polar fimbriae K07347 fimD; outer membrane usher protein
D S2296 yehB; putative outer membrane protein K07347 fimD; outer membrane usher protein
D S4254 probable fimbrial protein remnant K07347 fimD; outer membrane usher protein
D S4458 fimF; minor fimbrial subunit, precursor polypeptide K07348 fimF; minor fimbrial subunit
D S4457 fimG; minor fimbrial subunit, precursor polypeptide K07349 fimG; minor fimbrial subunit
D S4456 fimH; minor fimbrial subunit, D-mannose specific adhesin K07350 fimH; minor fimbrial subunit
D S1108 csgB; minor curlin subunit precursor K04335 csgB; minor curlin subunit
D S1113 csgC; putative curli production protein K04336 csgC; curli production protein
D S1106 csgE; Curli production assembly/transport component CsgE precursor K04337 csgE; curli production assembly/transport component CsgE
D S1105 csgF; Curli production assembly/transport component CsgF precursor K04338 csgF; curli production assembly/transport component CsgF
D S0097 secA; preprotein translocase; secretion protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D S4120 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB
D S0353 secD; membrane protein K03072 secD; preprotein translocase subunit SecD
D S3681 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D S0354 secF; membrane protein K03074 secF; preprotein translocase subunit SecF
D S3433 secG; protein translocase membrane component K03075 secG; preprotein translocase subunit SecG
D S0096 yacA; hypothetical protein K13301 secM; secretion monitor
D S4430 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY
D S2847 ffh; GTP-binding export factor binds to signal sequence, GTP and RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D S4281 ftsY; cell division membrane protein K03110 ftsY; fused signal recognition particle receptor
D S0352 yajC; hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D S4012 yidC; 60 KD inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D S3840 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D S3838 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D S3837 yigU; hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D S0676 ybeC; hypothetical protein K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:sfx02042]
D S4533 ytfL; putative transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D S2850 yfjD; putative transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D S3084 putative oxidoreductase K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:sfx02022]
D S0345 phoR; positive and negative sensor protein for pho regulon K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D S0344 phoB; positive response regulator for pho regulon K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D S1231 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D S1232 phoP; transcriptional regulatory protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D S4340 envZ; protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D S4339 ompR; response regulator (sensor, EnvZ) K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D S1763 rstB; sensor histidine protein kinase, RstA regulator K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D S1761 rstA; response transcriptional regulatory protein (RstB sensor) K07661 rstA; two-component system, OmpR family, response regulator RstA
D S3758 cpxA; probable sensor protein (histidine protein kinase) K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D S3757 cpxR; transcriptional regulator in 2-component system K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D S4702 creC; catabolite repression sensor kinase for PhoB, alternative sensor for pho regulon K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D S4701 creB; catabolic regulation response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D S2268 baeS; sensor protein for BaeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D S2269 baeR; transcriptional response regulatory protein (sensor BaeS) K07664 baeR; two-component system, OmpR family, response regulator BaeR
D S3619 basS; sensor protein for BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D S3620 basR; transcriptional regulatory protein K07771 basR; two-component system, OmpR family, response regulator BasR
D S0479 ybcZ; putative 2-component sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D S0480 ylcA; putative 2-component transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D S3271 ygiY; putative 2-component sensor protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D S3270 ygiX; putative 2-component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D S1065 torR; TorCAD response regulator K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D S3468 arcB; histidine protein kinase/phosphatase, aerobic respiration sensor-response protein, sensor for arcA K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D S4704 arcA; negative response regulator of genes in aerobic pathways (sensors, ArcB and CpxA) K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D S2112 yedV; putative 2-component sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D S2113 yedW; putative 2-component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D S1309 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D S1308 narL; nitrate/nitrite response regulator protein NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D S2407 narP; nitrate/nitrite response regulator (sensor NarQ) K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D S3975 uhpB; sensor histidine protein kinase, phosphorylates UhpA K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D S3976 uhpA; response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D S2433 rcsC; sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D S2431 yojN; putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D S2432 rcsB; positive response regulator for colanic capsule biosynthesis, (sensor, RcsC) K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D S2993 barA; sensor-regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D S2053 uvrY; putative 2-component transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D S2574 evgS; putative sensor for regulator EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D S2573 evgA; putative positive transcription regulator (sensor EvgS) K07690 evgA; two-component system, NarL family, response regulator EvgA
D S3632 yjdH; putative 2-component sensor protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D S3631 yjdG; putative 2-component transcriptional regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR
D S2325 yehU; putative 2-component sensor protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D S2585 putative 2-component transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator
D S2324 yehT; hypothetical protein K02477 K02477; two-component system, LytTR family, response regulator
D S3807 glnL; histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D S3808 glnG; sensor glnL response regulator (nitrogen regulator I, NRI) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D S3660 hydH; sensor kinase for HydG, hydrogenase 3 activity K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D S3659 hydG; response regulator of hydrogenase 3 activity (sensor HydH) K07713 zraR; two-component system, NtrC family, response regulator HydG
D S2775 yfhK; putative 2-component sensor protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D S2773 yfhA; putative 2-component transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D S2028 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D S2022 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D S2023 cheB; response regulator for chemotaxis (cheA sensor); protein methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D S1321 hnr; Hnr protein K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:sfx02035]
D S2028 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D S2027 cheW; positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW
D S2024 cheR; response regulator for chemotaxis; protein glutamate methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D S2023 cheB; response regulator for chemotaxis (cheA sensor); protein methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D S2022 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D S2021 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D S4656 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D S2026 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D S1485 trg; methyl-accepting chemotaxis protein III, ribose sensor receptor K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D S2025 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D S2079 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D S2080 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D S2086 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D S2088 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D S2089 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D S0299 fhiA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D S2014 flhB; putative part of export apparatus for flagellar proteins K02401 flhB; flagellar biosynthesis protein FlhB
D S2012 flhE; flagellar protein K03516 flhE; flagellar protein FlhE
D S2078 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D S2084 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D S2085 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D S1164 flgI; flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D S1156 flgA; flagellar basal body P-ring protein FlgA precursor K02386 flgA; flagellar basal body P-ring formation protein FlgA
D S1163 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D S2083 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D S2076 fliE; flagellar hook-basal body 11K protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D S2082 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D S1157 flgB; flagellar basal-body rod protein FlgB (proximal rod protein) K02387 flgB; flagellar basal-body rod protein FlgB
D S1159 flgD; flagellar hook formation protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D S1162 flgG; flagellar basal body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG
D S1165 flgJ; flagellar basal body protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D S1160 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D S1154 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D S2062 fliC; flagellin K02406 fliC; flagellin
D S2063 fliD; flagellar protein FliD K02407 fliD; flagellar hook-associated protein 2
D S2064 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D S2065 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D S2031 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D S2030 motA; proton conductor component of motor K02556 motA; chemotaxis protein MotA
D S2029 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D S0298 mbhA; putative motility protein K02557 motB; chemotaxis protein MotB
D S2060 fliZ; putative regulator of FliA K02425 fliZ; regulator of sigma S factor FliZ
D S1155 flgM; flagellar protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D S3146 yggR; putative transport protein K02669 pilT; twitching motility protein PilT
D S3211 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D S4465 fimA; major type 1 subunit fimbrin (pilin) K07345 fimA; major type 1 subunit fimbrin (pilin)
D S3961 lpfA; putative major fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D S4463 fimC; periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D S1006 ycbS; putative outer membrane protein K07347 fimD; outer membrane usher protein
D S4048 lpfC; putative long polar fimbriae K07347 fimD; outer membrane usher protein
D S2296 yehB; putative outer membrane protein K07347 fimD; outer membrane usher protein
D S4254 probable fimbrial protein remnant K07347 fimD; outer membrane usher protein
D S4458 fimF; minor fimbrial subunit, precursor polypeptide K07348 fimF; minor fimbrial subunit
D S4457 fimG; minor fimbrial subunit, precursor polypeptide K07349 fimG; minor fimbrial subunit
D S4456 fimH; minor fimbrial subunit, D-mannose specific adhesin K07350 fimH; minor fimbrial subunit
D S4464 fimI; fimbrial protein K07351 fimI; fimbrial protein
D S0469 sfmA; putative fimbrial-like protein K07352 sfmA; type 1 fimbrial protein
D S0470 sfmC; putative chaperone K07353 sfmC; fimbrial chaperone protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:sfx04812]
D S3506 mreB; regulator of ftsI, penicillin binding protein 3 K03569 mreB; rod shape-determining protein MreB and related proteins
D S0094 ftsZ; tubulin-like GTP-binding protein and GTPase K03531 ftsZ; cell division protein FtsZ
D S0093 ftsA; ATP-binding cell division protein K03590 ftsA; cell division protein FtsA
D S1249 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D S1248 minD; cell division inhibitor K03609 minD; septum site-determining protein MinD
D S1247 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
C 04147 Exosome [BR:sfx04147]
D S0425 htpG; chaperone Hsp90, heat shock protein C 62.5 K04079 HSP90A; molecular chaperone HtpG
D S2988 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D S1559 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D S3111 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D S1930 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D S1838 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D S4381 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D S4564 mopA; GroEL, chaperone Hsp60, peptide-dependent ATPase, heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D S0014 dnaK; chaperone Hsp70; autoregulated heat shock protein K04043 dnaK; molecular chaperone DnaK
D S3551 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D S2726 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D S4405 tufA; protein chain elongation factor EF-Tu (duplicate of tufB) K02358 tuf; elongation factor Tu
D S3682 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D S1187 ycfF; hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D S2611 yfeH; putative cytochrome oxidase K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D S1538 fadD; acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D S3052 yqeF; putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D S0426 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D S0421 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D S3709 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D S3430 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D S4520 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D S0555 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D S4308 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D S3743 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D S3806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D S0270 hemB; 5-aminolevulinate dehydratase; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D S0252 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D S3098 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D S3657 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase, AICAR formyltransferase; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D S0115 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D S1928 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D S3750 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D S0557 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D S4572 blc; outer membrane lipoprotein (lipocalin) K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:sfx02048]
D S4635 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D S4357 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D S3517 yhdJ; putative methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D S2100 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D S2143 putative cell killing protein of prophage K18919 hokC_D; protein HokC/D
D S0017 gef; membrane toxin K18919 hokC_D; protein HokC/D
D S0912 host cell-killing modulation protein K18919 hokC_D; protein HokC/D
D S1668 relF; prophage maintenance protein K18919 hokC_D; protein HokC/D
D S0500 hypothetical protein K18922 hokE; protein HokE
D S0499 hypothetical protein K18922 hokE; protein HokE
D S0016 sokC; antisense RNA K18871 sokC; sRNA antisense regulator of MokC and HokC protein
D S0604 hypothetical protein K19048 symE; toxic protein SymE
D S1669 relE; hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D S1670 relB; negative regulator of translation K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D S2201 yefM; hypothetical protein K19159 yefM; antitoxin YefM
D S0302 yafO; hypothetical protein K19160 yafO; mRNA interferase YafO [EC:3.1.-.-]
D S0301 yafN; hypothetical protein K19161 yafN; antitoxin YafN
D S0412 hha; hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D S0413 ybaJ; hypothetical protein K19162 tomB; hha toxicity modulator TomB
D S1393 pspC; putative regulator of phage shock response K03973 pspC; phage shock protein C
D S1392 pspB; phage shock protein K03970 pspB; phage shock protein B
D S3330 ygjN; hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D S3329 ygjM; hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D S0435 ybaQ; hypothetical protein K21498 higA-1; antitoxin HigA-1
D S1881 yddM; hypothetical protein K21498 higA-1; antitoxin HigA-1
D S2719 putative stabilization protein K21495 fitA; antitoxin FitA
D S4500 yjgK; hypothetical protein K19334 tabA; biofilm protein TabA
D S0799 ybiM; hypothetical protein K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A
D S1144 yceP; hypothetical protein K12148 bssS; biofilm regulator BssS
D S0829 putative receptor K19688 bssR; biofilm regulator BssR
D S1196 ycfR; hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA
D S0094 ftsZ; tubulin-like GTP-binding protein and GTPase K03531 ftsZ; cell division protein FtsZ
D S3506 mreB; regulator of ftsI, penicillin binding protein 3 K03569 mreB; rod shape-determining protein MreB and related proteins
D S3267 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D S3275 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D S2605 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D S3204 yeeV; hypothetical protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D S3203 yeeU; putative structural protein K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
D S3081 hypothetical protein K19168 cptA; toxin CptA
D S3082 ygfY; hypothetical protein K09159 cptB; antitoxin CptB
D S2749 yfhO; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:sfx04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:sfx04090]
C 01504 Antimicrobial resistance genes [BR:sfx01504]
D S0838 cmr; chloramphenicol resistance pump Cmr K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D S2703 dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D S0479 ybcZ; putative 2-component sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D S0480 ylcA; putative 2-component transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D S1231 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D S1232 phoP; transcriptional regulatory protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D S0415 acrA; acriflavin resistance protein AcrA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D S0414 acrB; acriflavine resistance protein K18138 acrB; multidrug efflux pump
D S0439 ybbI; putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D S3280 tolC; outer membrane channel TolC K12340 tolC; outer membrane protein
D S2573 evgA; putative positive transcription regulator (sensor EvgS) K07690 evgA; two-component system, NarL family, response regulator EvgA
D S4169 hypothetical protein K18898 mdtE; membrane fusion protein, multidrug efflux system
D S1690 marA; transcriptional activator of defense systems K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D S2430 micF; regulatory antisense RNA K18513 micF; small regulatory RNA MicF
D S0990 ompF; outer membrane protein 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
D S2105 putative outer membrane pore protein K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sfx00537]
D S0252 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D S4217 treF; cytoplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D S1284 treA; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:sfx03200]
D S0753 minor tail protein K26974 L; Enterobacteria phage tail tip protein L
D S0754 putative tail assembly protein K26975 K; Enterobacteria phage tail tip assembly protein K
D S0734 endopeptidase K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:sfx03100]
D S2601 alaX; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D S2602 alaW; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D S0196 alaV; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D S3532 alaU; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D S3823 alaT; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D S0474 argU; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S1984 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S0728 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S0711 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S1662 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S3889 argX; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2561 argW; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2906 argZ; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2907 argY; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2908 argV; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2905 argQ; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D S2149 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D S2164 asnU; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D S2162 asnW; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D S2167 asnV; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D S0199 aspU; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D S3924 aspT; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D S0210 aspV; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D S2049 cysT; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D S0634 glnU; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D S0636 glnW; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D S0639 glnV; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D S0640 glnX; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D S2825 gltW; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D S3655 gltV; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D S3927 gltU; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D S3693 gltT; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D S0713 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S3684 glyT; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S0730 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S1982 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S4585 glyV; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S4586 glyX; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S4587 glyY; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S4588 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S2050 glyW; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S3066 glyU; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D S3888 hisR; tRNA-His K14226 tRNA-His; tRNA His
D S0195 ileV; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D S3824 ileT; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D S3533 ileU; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D S3432 leuU; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S4485 leuX; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S0632 leuW; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S3887 leuT; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S4671 leuV; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S4673 leuQ; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S4672 leuP; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S2048 leuZ; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D S0563 lysY; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D S0565 lysW; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D S0567 lysT; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D S2608 lysV; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D S0710 tRNA-Ile K14230 tRNA-Met; tRNA Met
D S0727 tRNA-Ile K14230 tRNA-Met; tRNA Met
D S0631 metT; tRNA-Met K14230 tRNA-Met; tRNA Met
D S0637 metU; tRNA-Met K14230 tRNA-Met; tRNA Met
D S1985 tRNA-Ile K14230 tRNA-Met; tRNA Met
D S3023 metZ; tRNA-Met K14230 tRNA-Met; tRNA Met
D S3024 metW; tRNA-Met K14230 tRNA-Met; tRNA Met
D S3429 metY; tRNA-Met K14230 tRNA-Met; tRNA Met
D S1663 tRNA-Ile K14230 tRNA-Met; tRNA Met
D S2138 tRNA-Ile K14230 tRNA-Met; tRNA Met
D S3316 ileX; tRNA-Ile K14230 tRNA-Met; tRNA Met
D S2864 ileY; tRNA-Ile K14230 tRNA-Met; tRNA Met
D S3167 pheV; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D S4555 pheU; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D S4190 proK; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D S2405 proL; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D S3886 proM; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D S2909 serV; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D S2147 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D S1039 serT; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D S0883 serW; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D S1099 serX; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D S0712 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S3529 thrV; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S3683 thrT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S3686 thrU; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S2137 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S1983 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S0729 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S0315 thrW; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D S3923 trpT; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D S1317 tyrT; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D S3685 tyrU; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D S0564 valZ; tRNA-Val K14237 tRNA-Val; tRNA Val
D S0566 valT; tRNA-Val K14237 tRNA-Val; tRNA Val
D S2607 valY; tRNA-Val K14237 tRNA-Val; tRNA Val
D S2606 valX; tRNA-Val K14237 tRNA-Val; tRNA Val
D S1825 valV; tRNA-Val K14237 tRNA-Val; tRNA Val
D S1826 valW; tRNA-Val K14237 tRNA-Val; tRNA Val
D S4071 selC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D S0194 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S2826 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3534 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3656 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3694 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3825 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S3928 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D S0197 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S2824 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3531 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3654 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3692 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3822 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S3926 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D S0198 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S2823 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3528 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3530 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3653 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3691 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3821 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S3925 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D S0407 ffs; 4.5S RNA K01983 ffs; SRP RNA
D S3375 rnpB; RNA component of RNase P K01978 rnpB; M1 RNA
D S0016 sokC; antisense RNA K18871 sokC; sRNA antisense regulator of MokC and HokC protein
D S2858 ssrA; 10Sa RNA (tmRNA) K15035 ssrA; transfer-messenger RNA
D S2093 dsrA; antsense RNA silencer of rcsA gene K18502 dsrA; small regulatory RNA DsrA
D S2430 micF; regulatory antisense RNA K18513 micF; small regulatory RNA MicF
D S3000 csrB; CsrA-binding RNA K18515 csrB; small regulatory RNA CsrB
D S3812 spf; spot 42 RNA K18527 spf; small regulatory RNA Spot 42
D S3702 oxyS; regulatory RNA K18528 oxyS; small regulatory RNA OxyS
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D S3260 yqhE; hypothetical protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D S0200 yafB; putative aldose reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D S0519 ybdH; putative oxidoreductase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D S3249 putative reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D S3328 ygjL; putative NADPH dehydrogenase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D S1898 yncB; putative oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D S0038 caiA; probable carnitine operon oxidoreductase K08297 caiA; crotonobetainyl-CoA dehydrogenase [EC:1.3.8.13]
D S1143 solA; sarcosine oxidase-like protein K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D S1649 ydiS; flavoprotein K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D S2975 ygcN; hypothetical protein K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D S0042 fixC; flavoprotein K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D S3576 qor; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D S3273 mdaB; modulator of drug activity B K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D S1471 acpD; acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D S0530 ahpF; alkyl hydroperoxide reductase, F52a subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D S4532 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D S1560 yeaA; hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D S3237 hypothetical protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D S2513 yfcG; putative S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D S3353 yqjG; putative transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D S1478 cybB; cytochrome b(561) K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D S4174 yhjA; putative cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D S2673 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D S1413 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D S0529 ahpC; alkyl hydroperoxide reductase, C22 subunit K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D S1876 osmC; osmotically inducible protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D S2632 hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D S4301 yhhW; hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D S0795 ybiX; putative enzyme K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D S2771 hmpA; dihydropteridine reductase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D S1540 yeaX; putative diogenase beta subunit K22444 cntB; carnitine monooxygenase subunit [EC:1.14.13.239]
D S2044 ftn; cytoplasmic ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D S0122 yacK; hypothetical protein K14588 cueO; cuproxidase [EC:1.16.3.4]
D S3745 fpr; ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D S2925 ygbD; putative oxidoreductase K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-]
D S4234 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D S2688 putative oxidoreductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D S2710 hypothetical arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D S4515 nrdG; anaerobic ribonucleotide reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D S0817 ybiY; putative pyruvate formate-lyase 2 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D S3717 pflC; probable pyruvate formate lyase activating enzyme 2 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D S0961 pflA; pyruvate formate lyase activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D S0868 putative enzyme K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D S2674 hyfA; hydrogenase 4 Fe-S subunit K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D S2676 hyfC; hydrogenase 4 membrane subunit K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D S2677 hyfD; hydrogenase 4 membrane subunit K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D S2678 hyfE; hydrogenase 4 membrane subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D S2679 hyfF; hydrogenase 4 membrane subunit K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D S2682 hyfI; hydrogenase 4 Fe-S subunit K12144 hyfI; hydrogenase-4 component I [EC:1.-.-.-]
D S2683 putative protein processing element K12145 hyfJ; hydrogenase-4 component J [EC:1.-.-.-]
D S2959 pcm; L-isoaspartate protein carboxylmethyltransferase type II K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D S1821 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D S1702 putative enzyme K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D S1494 tehB; Tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D S1117 ymdD; hypothetical protein K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-]
D S0647 lnt; apolipoprotein N-acyltransferase, copper homeostasis protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D S3414 yhbS; hypothetical protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D S4185 yiaC; hypothetical protein K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D S3652 yjaB; hypothetical protein K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D S0303 yafP; hypothetical protein K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D S1901 putative resistance protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D S0885 aat; leucyl, phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D S1405 ycjT; hypothetical protein K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D S1276 modD; putative molybdenum transport protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D S2818 yfiP; hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D S3036 lgt; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; a major membrane phospholipid K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D S2428 yojL; hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D S3791 yihV; putative kinase K18478 yihV; sulfofructose kinase [EC:2.7.1.184]
D S4370 yhfQ; putative kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D S1645 ydiA; hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D S3299 glnE; adenylylating enzyme for glutamine synthetase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D S3180 reverse transcriptase-like protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D S1545 yeaP; hypothetical protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D S1642 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D S4660 mdoB; phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D S2578 putative enzyme K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D S2575 yfdE; putative enzyme K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D S0037 caiB; l-carnitine dehydratase K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21]
D S1115 putative polyprotein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D S0503 fes; enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D S0428 ybaC; putative lipase K01066 aes; acetyl esterase [EC:3.1.1.-]
D S0574 ybgC; hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D S0815 hypothetical protein K07757 ybiV; sugar-phosphatase [EC:3.1.3.23]
D S1354 yciV; putative enzyme K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D S2553 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D S1241 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D S2392 rtn; hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D S0409 ylaB; hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D S4206 yhjK; hypothetical protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D S3140 endA; DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D S1184 ycfH; hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D S4681 yjjV; hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D S3836 yigW; hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D S0618 ybfF; hypothetical protein K01175 ybfF; esterase [EC:3.1.-.-]
D S0308 yafA; hypothetical protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D S4204 yhjM; putative endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D S0944 putative lysozyme protein R of prophage CP-933K K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D S0733 putative endolysin R of prophage CP-933V K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D S0229 putative endolysin R of prophage CP-933V K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D S4073 yicI; hypothetical protein K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D S3796 yihQ; putative glycosidase K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199]
D S3327 ygjK; putative isomerase K03931 ygjK; glucosidase [EC:3.2.1.-]
D S0578 ybgG; putative sugar hydrolase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D S0789 ybiA; hypothetical protein K09935 ybiA; N-glycosidase YbiA [EC:3.2.2.-]
D S3543 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D S1612 ydjC; hypothetical protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D S0677 ybeM; putative amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D S4509 yjgF; hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D S3365 yhaR; hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D S3393 agaI; putative galactosamine-6-phosphate isomerase K02080 agaI; putative deaminase/isomerase [EC:3.5.99.-]
D S4373 yhfN; putative transport protein K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]
D S3300 ygiF; hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D S2237 wcaH; GDP-mannose mannosyl hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-]
D S0397 cof; hypothetical protein K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D S2463 yfaO; hypothetical protein K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-]
D S2660 yffH; hypothetical protein K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D S1171 yceF; hypothetical protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D S3942 yieN; putative 2-component regulator K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D S3793 yihT; putative aldolase K01671 yihT; sulfofructosephosphate aldolase [EC:4.1.2.57]
D S0818 mipB; putative transaldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D S4589 yjeF; hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D S0035 caiD; carnitine racemase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149]
D S3019 hypothetical protein K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D S4469 yjhT; hypothetical protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D S3013 fucU; protein of fucose operon K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D S3770 yiiL; hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D S4371 yhfP; hypothetical protein K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D S2922 gutQ; hypothetical protein K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13]
D S3794 yihS; hypothetical protein K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D S0036 caiC; probable crotonobetaine/carnitine-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D S4519 yjfG; putative ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D S4323 yhgJ; hypothetical protein K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D S1787 ydgO; hypothetical protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D S1786 putative membrane protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D S1785 hypothetical protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D S4276 zntA; zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D S4510 mgtA; Mg2+ transport ATPase, P-type 1 K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D S0141 sfsA; probable regulator for maltose metabolism K06206 sfsA; sugar fermentation stimulation protein A
D S1064 torT; periplasmic protein TorT K11930 torT; periplasmic protein TorT
D S0281 ykgE; putative dehydrogenase subunit K18928 lldE; L-lactate dehydrogenase complex protein LldE
D S0280 ykgF; hypothetical protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D S0279 ykgG; putative transporter K00782 lldG; L-lactate dehydrogenase complex protein LldG
D S4470 yjhS; hypothetical protein K22111 nanS; 9-O-acetyl-N-acetylneuraminic acid deacetylase
C 99982 Energy metabolism
D S3777 fdhD; FdhD protein K02379 fdhD; FdhD protein
D S2744 fdx; [2FE-2S] ferredoxin, electron carrer protein K04755 fdx; ferredoxin, 2Fe-2S
D S2451 yfaE; hypothetical protein K11107 yfaE; ferredoxin
D S1788 hypothetical protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D S1789 ydgQ; hypothetical protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D S1784 hypothetical protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D S2927 hydN; 4Fe-4S iron-sulfur protein K05796 hydN; electron transport protein HydN
D S3946 mioC; MioC protein K06205 mioC; MioC protein
D S3080 fldB; flavodoxin 2 K03840 fldB; flavodoxin II
D S2681 hyfH; hydrogenase 4 Fe-S subunit K12143 hyfH; hydrogenase-4 component H
D S2748 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D S2933 hycB; probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) K15827 hycB; formate hydrogenlyase subunit 2
D S2932 hycC; membrane-spanning protein of hydrogenase 3 (part of FHL complex) K15828 hycC; formate hydrogenlyase subunit 3
D S2931 hycD; membrane-spanning protein of hydrogenase 3 (part of FHL complex) K15829 hycD; formate hydrogenlyase subunit 4
D S2930 hycE; large subunit of hydrogenase 3 (part of FHL complex) K15830 hycE; formate hydrogenlyase subunit 5
D S2924 putative flavodoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D S2421 napD; hypothetical protein K02570 napD; periplasmic nitrate reductase NapD
D S2422 napF; ferredoxin-type protein K02572 napF; ferredoxin-type protein NapF
D S3601 nrfE; formate-dependent nitrite reductase K04016 nrfE; cytochrome c-type biogenesis protein NrfE
D S3602 nrfF; component of formate-dependent nitrite reductase complex K04017 nrfF; formate-dependent nitrite reductase complex subunit NrfF
D S3603 nrfG; component of formate-dependent nitrite reductase complex K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG
D S0620 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
D S2416 napC; cytochrome c-type protein K02569 napC; cytochrome c-type protein NapC
D S2419 napG; ferredoxin-type protein K02573 napG; ferredoxin-type protein NapG
D S2418 napH; ferredoxin-type protein K02574 napH; ferredoxin-type protein NapH
D S0040 fixA; probable flavoprotein subunit K03521 fixA; electron transfer flavoprotein beta subunit
D S0043 fixX; putative ferredoxin K03855 fixX; ferredoxin like protein
D S2976 ygcO; hypothetical protein K03855 fixX; ferredoxin like protein
D S1648 ydiT; hypothetical protein K03855 fixX; ferredoxin like protein
D S3598 nrfB; formate-dependent nitrite reductase K04013 nrfB; cytochrome c-type protein NrfB
D S3599 nrfC; formate-dependent nitrite reductase K04014 nrfC; protein NrfC
D S1831 putative oxidoreductase, Fe-S subunit K04014 nrfC; protein NrfC
D S3600 nrfD; formate-dependent nitrate reductase, transmembrane protein K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D S2888 nrdI; hypothetical protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D S2614 cysZ; sulfate transport protein K06203 cysZ; CysZ protein
D S2639 hypothetical protein K04025 eutK; ethanolamine utilization protein EutK
D S2641 hypothetical protein K04026 eutL; ethanolamine utilization protein EutL
D S2654 hypothetical protein K04029 eutP; ethanolamine utilization protein EutP
D S2655 hypothetical protein K04031 eutS; ethanolamine utilization protein EutS
D S0180 yaeR; hypothetical protein K08234 yaeR; glyoxylase I family protein
D S0072 leuL; leu operon leader peptide K05806 leuL; leu operon leader peptide
D S1415 ycjI; putative carboxypeptidase K14054 mpaA; murein peptide amidase A
D S3145 yggS; hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D S2229 wcaM; hypothetical protein K16711 wcaM; colanic acid biosynthesis protein WcaM
D S1366 yciS; hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D S1367 yciM; putative heat shock protein K19804 lapB; lipopolysaccharide assembly protein B
D S0779 ybhN; hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D S4203 yhjN; hypothetical protein K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D S3882 hemY; HemY protein K02498 hemY; HemY protein
D S3841 yigR; hypothetical protein K03688 ubiB; ubiquinone biosynthesis protein
D S3842 yigP; hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D S3287 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D S3415 yhbT; hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D S3820 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D S3265 sufI; suppressor of ftsI K04753 sufI; suppressor of ftsI
D S4025 yieF; hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D S2762 yphA; hypothetical protein K15977 K15977; putative oxidoreductase
D S2666 ypfH; hypothetical protein K06999 K06999; phospholipase/carboxylesterase
D S2819 yfiQ; hypothetical protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D S2920 gutM; glucitol operon activator K02466 gutM; glucitol operon activator protein
D S3494 yhcO; hypothetical protein K03623 yhcO; ribonuclease inhibitor
D S0680 cspE; cold shock protein K03704 cspA; cold shock protein
D S0880 cspD; cold shock protein K03704 cspA; cold shock protein
D S1057 cspH; cold shock-like protein K03704 cspA; cold shock protein
D S1060 cspG; putative cold shock protein K03704 cspA; cold shock protein
D S1518 cspC; cold shock protein K03704 cspA; cold shock protein
D S4179 cspA; cold shock protein 7.4, transcriptional activator of hns K03704 cspA; cold shock protein
D S3371 tdcR; threonine dehydratase operon activator protein K07591 tdcR; threonine dehydratase operon activator protein
D S3668 yjaE; putative transcriptional regulator K07740 rsd; regulator of sigma D
D S4805 trpL; trp operon leader peptide K07802 trpL; trp operon leader peptide
D S0001 thrL; thr operon leader peptide K08278 thrL; thr operon leader peptide
D S2934 hycA; formate hydrogenlyase regulatory protein K15833 hycA; formate hydrogenlyase regulatory protein HycA
D S0401 glnK; nitrogen regulatory protein P-II 2 K04752 glnK; nitrogen regulatory protein P-II 2
D S4337 yhgF; hypothetical protein K06959 tex; protein Tex
C 99974 Translation
D S4261 yhiH; putative ATP-binding component of a transport system K13926 rbbA; ribosome-dependent ATPase
C 99975 Protein processing
D S0881 yljA; hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D S0387 tig; trigger factor K03545 tig; trigger factor
D S2116 hypothetical protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D S3781 fdhE; FdhE protein K02380 fdhE; FdhE protein
D S2857 smpB; ssrA(tmRNA)-binding protein K03664 smpB; SsrA-binding protein
D S2937 hypC; hydrogenase isoenzyme HypC K04653 hypC; hydrogenase expression/formation protein HypC
D S3238 hybG; hydrogenase-2 component K04653 hypC; hydrogenase expression/formation protein HypC
D S2938 hypD; hydrogenase isoenzyme HypD K04654 hypD; hydrogenase expression/formation protein HypD
D S2939 hypE; hypE product K04655 hypE; hydrogenase expression/formation protein HypE
D S2926 hypF; transcriptional regulatory protein K04656 hypF; hydrogenase maturation protein HypF
D S2887 nrdH; glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH
D S4388 yhfA; hypothetical protein K07397 yhfA; putative redox protein
D S4328 yhgI; hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D S0406 ybaZ; hypothetical protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D S3007 exo; 5-3 exonuclease K01146 xni; protein Xni
D S4091 radC; DNA repair protein K03630 radC; DNA repair protein RadC
D S3201 yeeS; putative RADC family DNA repair protein K03630 radC; DNA repair protein RadC
D S3844 yigN; putative alpha helix chain K09760 rmuC; DNA recombination protein RmuC
D S0876 ybjD; hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D S3406 yraN; hypothetical protein K07460 yraN; putative endonuclease
D S3413 yhbQ; hypothetical protein K07461 K07461; putative endonuclease
D S3542 smf; hypothetical protein K04096 smf; DNA processing protein
D S4467 fimB; recombinase; regulator for fimA K07357 fimB; type 1 fimbriae regulatory protein FimB
D S4466 fimE; recombinase; regulator for fimA K07358 fimE; type 1 fimbriae regulatory protein FimE
D S0699 putative bacteriophage protein K06909 xtmB; phage terminase large subunit
D S0696 putative bacteriophage protein K06909 xtmB; phage terminase large subunit
D S0892 ycaJ; putative polynucleotide enzyme K07478 ycaJ; putative ATPase
D S3539 yrdD; putative DNA topoisomerase K07479 yrdD; putative DNA topoisomerase
D S1215 Bacteriophage P4 DNA primase K06919 K06919; putative DNA primase/helicase
D S2721 putative DNA helicase K07505 repA; regulatory protein RepA
D S2650 IS1N orfB K07480 insB; insertion element IS1 protein InsB
D S0020 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1004 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1521 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3776 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0455 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0136 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1059 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1500 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1659 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3394 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1328 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4667 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4549 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4247 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4236 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4147 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4036 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4014 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3936 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3800 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3481 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3344 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3291 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2983 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2336 IS1 B K07480 insB; insertion element IS1 protein InsB
D S2123 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1837 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1627 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1609 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1281 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4230 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4219 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4175 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4113 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4059 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3523 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3389 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2986 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2942 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2551 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2243 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2034 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1961 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1877 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1862 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1398 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0958 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0606 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0543 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0506 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0312 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0953 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2385 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2321 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2317 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2278 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4143 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2299 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4605 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4460 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3131 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3124 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1857 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1774 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0874 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0471 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0283 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0275 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4639 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4610 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4568 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4554 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4498 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4480 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3704 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4449 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S0079 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1069 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1239 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1453 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1461 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1616 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1866 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1891 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2110 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2199 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S2483 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3072 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3213 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3519 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3585 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3610 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3785 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S3874 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4098 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4131 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4167 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4471 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1973 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S4811 IS1 orfB K07480 insB; insertion element IS1 protein InsB
D S1002 IS1 orfB, A K07480 insB; insertion element IS1 protein InsB
D S1653 IS1 K07480 insB; insertion element IS1 protein InsB
D S1094 IS3 orfA K07483 K07483; transposase
D S2179 ISSfl3 orfA K07483 K07483; transposase
D S0526 ISEhe3 orfA K07483 K07483; transposase
D S0497 IS103; IS103 orf K07483 K07483; transposase
D S4064 IS3 orfA K07483 K07483; transposase
D S1483 IS103 orf K07483 K07483; transposase
D S4629 ISEhe3 orfA K07483 K07483; transposase
D S4475 ISEhe3a orf K07483 K07483; transposase
D S2104 ISEhe3 orfA K07483 K07483; transposase
D S1717 ISEhe3 orfA K07483 K07483; transposase
D S3209 IS3 orfA K07483 K07483; transposase
D S3055 IS3 orfA K07483 K07483; transposase
D S2861 IS3 orfA K07483 K07483; transposase
D S1253 IS3 orfA K07483 K07483; transposase
D S4437 ISSfl3 orfA K07483 K07483; transposase
D S2447 IS2 orfA K07483 K07483; transposase
D S0698 IS2 orfA K07483 K07483; transposase
D S0872 IS2 orfA K07483 K07483; transposase
D S1129 IS2 orfA K07483 K07483; transposase
D S1900 IS2 orfA K07483 K07483; transposase
D S3401 IS2 orfA K07483 K07483; transposase
D S4253 IS2 orfA K07483 K07483; transposase
D S4441 IS2 orfA K07483 K07483; transposase
D S0923 IS2 orfA K07483 K07483; transposase
D S0997 IS2 orfB K07483 K07483; transposase
D S1026 IS2 orfA K07483 K07483; transposase
D S1578 IS2 orfA K07483 K07483; transposase
D S1706 IS2 orfA K07483 K07483; transposase
D S1714 IS2 orfA K07483 K07483; transposase
D S1798 IS2 orfA K07483 K07483; transposase
D S2107 IS2 orfA K07483 K07483; transposase
D S2880 IS2 orfA K07483 K07483; transposase
D S3188 IS2 orfA K07483 K07483; transposase
D S3633 IS2 orfA K07483 K07483; transposase
D S3760 IS2 orfA K07483 K07483; transposase
D S3883 IS2 orfA K07483 K07483; transposase
D S3964 IS2 orfA K07483 K07483; transposase
D S4060 IS2 orfA K07483 K07483; transposase
D S4332 IS2 orfA K07483 K07483; transposase
D S2787 IS2 orfA K07483 K07483; transposase
D S4049 IS2 orfA K07483 K07483; transposase
D S3288 IS2 orfA K07483 K07483; transposase
D S2175 is629a; IS629 orfA K07483 K07483; transposase
D S1124 IS629 orfA K07483 K07483; transposase
D S0267 yi21_6; IS2 orfA K07483 K07483; transposase
D S1959 IS629 orfA K07483 K07483; transposase
D S4062 IS629 orfA K07483 K07483; transposase
D S0264 is600a; IS600 orfA K07483 K07483; transposase
D S0324 IS600 orfA K07483 K07483; transposase
D S0686 IS600 orfA K07483 K07483; transposase
D S0716 IS600 orfA K07483 K07483; transposase
D S0833 IS600 orfA K07483 K07483; transposase
D S0909 IS600 orfA K07483 K07483; transposase
D S0931 IS600 orfA K07483 K07483; transposase
D S0956 IS600 orfA K07483 K07483; transposase
D S0960 IS600 orfA K07483 K07483; transposase
D S1133 IS600 orfA K07483 K07483; transposase
D S1338 IS600 orfA K07483 K07483; transposase
D S1502 IS600 orfA K07483 K07483; transposase
D S1543 IS600 orfA K07483 K07483; transposase
D S1676 IS600 orfA K07483 K07483; transposase
D S1685 IS600 K07483 K07483; transposase
D S2131 IS600 orfA K07483 K07483; transposase
D S2949 IS600 orfA K07483 K07483; transposase
D S4476 IS600 orfA K07483 K07483; transposase
D S4632 IS600 orfA K07483 K07483; transposase
D S0317 IS600 orfA K07483 K07483; transposase
D S0735 IS600 orfA K07483 K07483; transposase
D S1110 IS600 K07483 K07483; transposase
D S1423 IS600 orfA K07483 K07483; transposase
D S1469 IS600 orfA K07483 K07483; transposase
D S2173 IS600 orfA K07483 K07483; transposase
D S2697 IS600 orfA K07483 K07483; transposase
D S2793 IS600 orfA K07483 K07483; transposase
D S3967 IS600 orfA K07483 K07483; transposase
D S4022 IS600 orfA K07483 K07483; transposase
D S3184 IS629 orfA K07483 K07483; transposase
D S2157 IS600 orfA K07483 K07483; transposase
D S2011 IS629 orfA K07483 K07483; transposase
D S0220 IS2 orfA K07483 K07483; transposase
D S1952 IS2 orfB K07483 K07483; transposase
D S1912 IS629 orfA K07483 K07483; transposase
D S0927 IS600 orfA K07483 K07483; transposase
D S0249 IS629 orfA K07483 K07483; transposase
D S3547 ISSfl3 orfA K07483 K07483; transposase
D S0486 IS629 orfA K07483 K07483; transposase
D S0488 IS2 orfA K07483 K07483; transposase
D S0899 ISSfl3 orfA K07483 K07483; transposase
D S0943 IS600 orfA K07483 K07483; transposase
D S1131 IS629 orfA K07483 K07483; transposase
D S2337 IS629 orfA K07483 K07483; transposase
D S4029 ISSfl3 orfA K07483 K07483; transposase
D S0948 IS629 orfA K07483 K07483; transposase
D S4248 IS600 orfA K07483 K07483; transposase
D S1998 IS911 orfA K07483 K07483; transposase
D S2018 IS911 orfA K07483 K07483; transposase
D S1980 IS911 orfA K07483 K07483; transposase
D S2134 ISSfl3 orfA K07483 K07483; transposase
D S0383 ISSfl3 orfA K07483 K07483; transposase
D S0523 IS911 orfA K07483 K07483; transposase
D S0328 IS629, orfA K07483 K07483; transposase
D S2155 IS911 orfA K07483 K07483; transposase
D S2191 ISSfl3 orfA K07483 K07483; transposase
D S0703 IS911 orfA K07483 K07483; transposase
D S0705 IS911 orfA K07483 K07483; transposase
D S0721 IS911 orfA K07483 K07483; transposase
D S0905 IS911 orfA K07483 K07483; transposase
D S0945 ISSfl3 orfA K07483 K07483; transposase
D S1426 IS911 orfA K07483 K07483; transposase
D S1126 IS911 orfA K07483 K07483; transposase
D S1673 IS911 orfA K07483 K07483; transposase
D S1738 IS911 orfA K07483 K07483; transposase
D S0223 IS911 orfA K07483 K07483; transposase
D S2565 IS911 orfA K07483 K07483; transposase
D S2440 IS911 orfA K07483 K07483; transposase
D S4481 IS911 orfA K07483 K07483; transposase
D S0382 ISSfl3 orfB K07484 K07484; transposase
D S0900 ISSfl3 orfB K07484 K07484; transposase
D S0946 ISSfl3 orfB K07484 K07484; transposase
D S2133 ISSfl3 orfB K07484 K07484; transposase
D S3548 ISSfl3 orfB K07484 K07484; transposase
D S4030 ISSfl3 orfB K07484 K07484; transposase
D S4438 ISSfl3 orfB K07484 K07484; transposase
D S2190 ISSfl3 orfB K07484 K07484; transposase
D S2180 ISSfl3 orfB K07484 K07484; transposase
D S2184 ISSfl3 orfC K07484 K07484; transposase
D S0901 ISSfl3 orfC,D K07484 K07484; transposase
D S4031 ISSfl3 orfC K07484 K07484; transposase
D S0379 ISSfl3 orfD K07484 K07484; transposase
D S2189 ISSfl3 orfC K07484 K07484; transposase
D S0947 ISSfl3 orfC K07484 K07484; transposase
D S4439 ISSfl3 orfC K07484 K07484; transposase
D S4440 ISSfl3 orfD K07484 K07484; transposase
D S3549 ISSfl3 orfC K07484 K07484; transposase
D S0297 yafM; hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D S3177 hypothetical protein K07493 K07493; putative transposase
D S0797 IS4 orf K07495 K07495; putative transposase
D S4521 IS4 orf K07495 K07495; putative transposase
D S4216 IS4 orf K07495 K07495; putative transposase
D S1588 IS4 orf K07495 K07495; putative transposase
D S3941 IS4 orf K07495 K07495; putative transposase
D S0405 IS4 orf K07495 K07495; putative transposase
D S0968 yi41; IS4 orf K07495 K07495; putative transposase
D S0201 IS4 orf K07495 K07495; putative transposase
D S3863 IS4 orf K07495 K07495; putative transposase
D S3708 IS4 orf K07495 K07495; putative transposase
D S3960 IS4 orf K07495 K07495; putative transposase
D S1325 IS4 orf K07495 K07495; putative transposase
D S2832 IS4 orf K07495 K07495; putative transposase
D S0985 IS4 orf K07495 K07495; putative transposase
D S2827 IS4 orf K07495 K07495; putative transposase
D S3004 IS4 orf K07495 K07495; putative transposase
D S3314 IS4 orf K07495 K07495; putative transposase
D S1813 putative virulence protein K07496 K07496; putative transposase
D S2072 putative virulence protein K07496 K07496; putative transposase
D S0234 IS911 orfB K07497 K07497; putative transposase
D S0262 ISEhe3 orfB K07497 K07497; putative transposase
D S0235 IS911 orfA K07497 K07497; putative transposase
D S0224 IS911 orfB K07497 K07497; putative transposase
D S2951 putative phage transposase K07497 K07497; putative transposase
D S1716 ISEhe3 orfB K07497 K07497; putative transposase
D S0527 ISEhe3 orfB K07497 K07497; putative transposase
D S0871 IS2 orfB K07497 K07497; putative transposase
D S0996 IS2 orfB K07497 K07497; putative transposase
D S4061 IS2 orfB K07497 K07497; putative transposase
D S0922 IS2 orfB K07497 K07497; putative transposase
D S0266 yi22_6; IS2 orfB K07497 K07497; putative transposase
D S1130 IS2 orfB K07497 K07497; putative transposase
D S1579 IS2 orfB K07497 K07497; putative transposase
D S1797 IS2 orfB K07497 K07497; putative transposase
D S1899 IS2 orfB K07497 K07497; putative transposase
D S1953 IS2 orfA K07497 K07497; putative transposase
D S2448 IS2 orfB K07497 K07497; putative transposase
D S2788 IS2 orfB K07497 K07497; putative transposase
D S2879 IS2 orfB K07497 K07497; putative transposase
D S3634 IS2 orfB K07497 K07497; putative transposase
D S3963 IS2 orfB K07497 K07497; putative transposase
D S4050 IS2 orfB K07497 K07497; putative transposase
D S4252 IS2 orfB K07497 K07497; putative transposase
D S4331 IS2 orfB K07497 K07497; putative transposase
D S4442 IS2 orfB K07497 K07497; putative transposase
D S1705 IS2 orfB K07497 K07497; putative transposase
D S3761 IS2 orfB K07497 K07497; putative transposase
D S3210 IS3 orfB K07497 K07497; putative transposase
D S2158 IS600 orfB K07497 K07497; putative transposase
D S0949 IS629 orfB K07497 K07497; putative transposase
D S0221 IS2 orfB K07497 K07497; putative transposase
D S0697 IS2 orfB K07497 K07497; putative transposase
D S4178 IS150 putative transposase K07497 K07497; putative transposase
D S2106 IS2 orfB K07497 K07497; putative transposase
D S3056 IS3 orfB K07497 K07497; putative transposase
D S1093 IS3 orfB K07497 K07497; putative transposase
D S0327 IS629 orfB K07497 K07497; putative transposase
D S4063 IS629 orfB K07497 K07497; putative transposase
D S0834 IS600 orfB K07497 K07497; putative transposase
D S4551 IS600 orfB K07497 K07497; putative transposase
D S0318 IS600 orfB K07497 K07497; putative transposase
D S0263 IS600 orfB K07497 K07497; putative transposase
D S0323 IS600 orfB K07497 K07497; putative transposase
D S0485 IS629 orfB K07497 K07497; putative transposase
D S0736 IS600 orfB K07497 K07497; putative transposase
D S0928 IS600 orfB K07497 K07497; putative transposase
D S0957 IS600 orfB K07497 K07497; putative transposase
D S0959 IS600 orfB K07497 K07497; putative transposase
D S1422 IS600 orfB K07497 K07497; putative transposase
D S1473 IS600 orfB K07497 K07497; putative transposase
D S1544 IS600 orfB K07497 K07497; putative transposase
D S1554 IS600 orfB K07497 K07497; putative transposase
D S1660 IS600 orfB K07497 K07497; putative transposase
D S1686 IS600 K07497 K07497; putative transposase
D S2130 IS600 orfB K07497 K07497; putative transposase
D S2172 IS600 orfB K07497 K07497; putative transposase
D S4477 IS600 orfB K07497 K07497; putative transposase
D S1132 IS629 orfB K07497 K07497; putative transposase
D S1468 IS600 orfB K07497 K07497; putative transposase
D S1960 IS629 orfB K07497 K07497; putative transposase
D S1989 IS600 orfB K07497 K07497; putative transposase
D S2020 IS600 orfB K07497 K07497; putative transposase
D S2176 is629b; IS629 orfB K07497 K07497; putative transposase
D S2698 IS600 orfB K07497 K07497; putative transposase
D S2950 IS600 orfB K07497 K07497; putative transposase
D S3966 IS600 orfB K07497 K07497; putative transposase
D S4021 IS600 orfB K07497 K07497; putative transposase
D S4631 IS600 orfB K07497 K07497; putative transposase
D S3473 IS600 orf K07497 K07497; putative transposase
D S1123 IS629 orfB K07497 K07497; putative transposase
D S2103 ISEhe3 orfB K07497 K07497; putative transposase
D S0487 IS2 orfB K07497 K07497; putative transposase
D S0687 IS600 orfB K07497 K07497; putative transposase
D S2009 IS629 orfB K07497 K07497; putative transposase
D S1972 IS600 orfB K07497 K07497; putative transposase
D S1978 IS911 orfB K07497 K07497; putative transposase
D S0522 IS911 orfB K07497 K07497; putative transposase
D S0498 IS150 orfB K07497 K07497; putative transposase
D S0250 IS629 orfB K07497 K07497; putative transposase
D S0326 IS600 orfB K07497 K07497; putative transposase
D S2181 IS629 orfA K07497 K07497; putative transposase
D S2338 IS629 orfB K07497 K07497; putative transposase
D S0701 IS911 orfB K07497 K07497; putative transposase
D S0708 IS911 orfB K07497 K07497; putative transposase
D S0715 IS600 orfB K07497 K07497; putative transposase
D S0719 IS911 orfB K07497 K07497; putative transposase
D S0910 IS600 orfB K07497 K07497; putative transposase
D S0930 IS600 orfB K07497 K07497; putative transposase
D S0942 IS600 orfB K07497 K07497; putative transposase
D S1027 IS2 orfB K07497 K07497; putative transposase
D S1431 IS911 orfB K07497 K07497; putative transposase
D S1482 IS103 orf K07497 K07497; putative transposase
D S1251 IS2 orfB K07497 K07497; putative transposase
D S1254 IS3 orfB K07497 K07497; putative transposase
D S1127 IS911 orfB K07497 K07497; putative transposase
D S1134 IS600 orfB K07497 K07497; putative transposase
D S1339 IS600 orfB K07497 K07497; putative transposase
D S1503 IS600 orfB K07497 K07497; putative transposase
D S1111 IS600 K07497 K07497; putative transposase
D S1715 IS2 orfB K07497 K07497; putative transposase
D S1910 IS629 orfB K07497 K07497; putative transposase
D S1911 IS629 orfB K07497 K07497; putative transposase
D S1671 b4285; IS911 orfB K07497 K07497; putative transposase
D S1675 IS600 orfB K07497 K07497; putative transposase
D S1736 IS911 orfB K07497 K07497; putative transposase
D S2794 IS600 orfB K07497 K07497; putative transposase
D S2438 IS911 orfB K07497 K07497; putative transposase
D S2862 IS3 orfB K07497 K07497; putative transposase
D S4483 IS911 orfB K07497 K07497; putative transposase
D S4630 ISEhe3 orfB K07497 K07497; putative transposase
D S3884 IS2 orfB K07497 K07497; putative transposase
D S4832 IS3 orfB K07497 K07497; putative transposase
D S3189 IS2 orfB K07497 K07497; putative transposase
D S3289 IS2 orfB K07497 K07497; putative transposase
D S3399 IS2 orfB K07497 K07497; putative transposase
D S1963 putative integrase for prophage CP-933R K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D S1391 pspA; phage shock protein, inner membrane protein K03969 pspA; phage shock protein A
D S1394 pspD; phage shock protein K03971 pspD; phage shock protein D
D S1395 pspE; phage shock protein K03972 pspE; phage shock protein E
D S0423 ybaB; hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D S2560 yfdC; putative transport protein K21990 yfdC; formate-nitrite transporter family protein
D S3798 yihO; putative permease K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D S3890 yifK; putative amino acid/amine transport protein K03293 TC.AAT; amino acid transporter, AAT family
D S0601 ybgH; putative transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D S1791 ydgR; putative transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D S3986 yidK; putative cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D S0346 brnQ; branched-chain amino-acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D S0938 ybhI; putative membrane pump protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D S3992 yidE; putative transport protein K07085 K07085; putative transport protein
D S0843 putative transport protein K07085 K07085; putative transport protein
C 99978 Cell growth
D S1343 yciB; cytoplasmic membrane protein K06190 ispZ; intracellular septation protein
D S4273 hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB
D S4542 ytfE; hypothetical protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D S1614 hypothetical protein K15722 cedA; cell division activator
D S4116 yibP; putative membrane protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D S1189 ycfM; hypothetical protein K07337 K07337; penicillin-binding protein activator
D S1025 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D S3001 syd; Syd protein K15723 syd; SecY interacting protein Syd
D S3294 glgS; glycogen biosynthesis protein GlgS K22720 glgS; surface composition regulator
C 99995 Signaling proteins
D S0110 ampE; AmpE protein K03807 ampE; AmpE protein
D S1510 yebJ; hypothetical protein K03607 proQ; ProP effector
D S4242 uspA; universal stress protein K06149 uspA; universal stress protein A
D S3746 yiiT; putative regulator K14065 uspD; universal stress protein D
D S1433 ydaA; hypothetical protein K14055 uspE; universal stress protein E
D S1449 ynaF; putative filament protein K14061 uspF; universal stress protein F
D S0531 ybdQ; hypothetical protein K11932 uspG; universal stress protein G
D S0518 cstA; carbon starvation protein K06200 cstA; carbon starvation protein
D S3805 yihK; putative GTP-binding factor K06207 typA; GTP-binding protein
D S0644 ybeZ; putative ATP-binding protein in pho regulon K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D S1555 yeaG; hypothetical protein K07180 prkA; serine protein kinase
D S3301 ygiM; hypothetical protein K07184 ygiM; SH3 domain protein
D S4690 smp; hypothetical protein K07186 smp; membrane protein
D S1689 marB; multiple antibiotic resistance protein K13630 marB; multiple antibiotic resistance protein MarB
D S0371 yajQ; hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
D S4503 yjgI; putative oxidoreductase K19336 bdcA; cyclic-di-GMP-binding biofilm dispersal mediator protein
D S4448 yjiD; hypothetical protein K21637 iraD; anti-adapter protein IraD
C 99992 Structural proteins
D S0891 lolA; periplasmic protein K03634 lolA; outer membrane lipoprotein carrier protein
D S1296 hemM; carrier of lipoproteins to outer membrane K02494 lolB; outer membrane lipoprotein LolB
D S2559 vacJ; lipoprotein precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA
D S3901 wzzE; putative transport protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D S1800 slyB; putative outer membrane protein K06077 slyB; outer membrane lipoprotein SlyB
D S0171 hlpA; histone-like protein K06142 hlpA; outer membrane protein
D S2958 nlpD; lipoprotein K06194 nlpD; lipoprotein NlpD
D S3067 putative lipoprotein K12943 ygeR; lipoprotein YgeR
D S3421 yhbM; putative control proteins K05803 nlpI; lipoprotein NlpI
D S2289 yegX; hypothetical protein K07273 acm; lysozyme
D S1345 yciD; putative outer membrane protein K07275 ompW; outer membrane protein
D S1625 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D S4227 slp; outer membrane protein induced after carbon starvation K07285 slp; outer membrane lipoprotein
D S1537 putative outer membrane protein K07285 slp; outer membrane lipoprotein
D S0385 yajG; putative polymerase/proteinase K07286 yajG; uncharacterized lipoprotein
D S2252 asmA; suppressor of ompF assembly mutants K07289 asmA; AsmA protein
D S4211 yhjG; hypothetical protein K07290 yhjG; AsmA family protein
D S0440 ybbJ; hypothetical protein K07340 ybbJ; inner membrane protein
D S4260 yhiI; putative membrane protein K01993 ABC-2.TX; HlyD family secretion protein
D S1754 putative transport protein K11744 tqsA; AI-2 transport protein TqsA
D S1370 osmB; osmotically inducible lipoprotein K04062 osmB; osmotically inducible lipoprotein OsmB
D S1604 osmE; activator of ntrL gene K04064 osmE; osmotically inducible lipoprotein OsmE
D S4703 creD; inner membrane protein CreD K06143 creD; inner membrane protein
D S2411 ccmE; cytochrome-c biosynthesis heme-carrier protein ccmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D S2408 ccmH; possible subunit of heme lyase K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D S2734 yfgA; putative membrane protein K15539 rodZ; cytoskeleton protein RodZ
D S3497 yhcR; hypothetical protein K21695 aaeX; protein AaeX
D S4222 hdeD; hypothetical protein K21908 hdeD; membrane protein HdeD
C 99994 Others
D S4041 phoU; negative regulator for pho regulon and putative enzyme in phosphate metabolism K02039 phoU; phosphate transport system protein
D S2041 yecI; ferritin-like protein K02255 ftnB; ferritin-like protein 2
D S4406 yheA; hypothetical protein K02192 bfd; bacterioferritin-associated ferredoxin
D S1118 mdoG; periplasmic glucans biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein
D S4558 cutA; divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D S2005 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
D S0049 apaG; hypothetical protein K06195 apaG; ApaG protein
D S3876 cyaY; hypothetical protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D S1306 ychN; hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D S2524 cvpA; membrane protein K03558 cvpA; membrane protein required for colicin V production
D S4155 bax; putative ATP-binding protein K03796 bax; Bax protein
D S1017 pqiB; paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D S1152 mviM; putative virulence factor K03810 mviM; virulence factor
D S2480 elaA; hypothetical protein K02348 elaA; ElaA protein
D S2821 yfiM; hypothetical protein K05811 yfiM; putative lipoprotein
D S1304 chaB; cation transport regulator K06197 chaB; cation transport regulator
D S4679 osmY; hyperosmotically inducible periplasmic protein K04065 osmY; hyperosmotically inducible periplasmic protein
D S1101 ycdX; hypothetical protein K04477 ycdX; putative hydrolase
D S2814 yfiD; putative formate acetyltransferase K06866 grcA; autonomous glycyl radical cofactor
D S1320 ychK; hypothetical protein K07001 K07001; NTE family protein
D S0151 yadR; hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein
D S1846 ydiC; hypothetical protein K05997 sufA; Fe-S cluster assembly protein SufA
D S1845 ynhE; hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D S1843 ynhC; hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D S0466 ybcI; hypothetical protein K07038 K07038; inner membrane protein
D S1619 hypothetical protein K07038 K07038; inner membrane protein
D S4365 yhfV; putative hydrolase K07048 PTER; phosphotriesterase-related protein
D S3788 rbn; tRNA processing exoribonuclease BN K07058 K07058; membrane protein
D S4213 yhjD; hypothetical protein K07058 K07058; membrane protein
D S4561 hypothetical protein K07113 fxsA; UPF0716 protein FxsA
D S1841 ynhA; hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D S3020 ygdK; hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D S1139 yceA; hypothetical protein K07146 K07146; UPF0176 protein
D S1234 ycfC; hypothetical protein K07153 hflD; high frequency lysogenization protein
D S0034 caiE; carnitine operon protein CaiE K08279 caiE; carnitine operon protein CaiE
D S3614 phnB; hypothetical protein K04750 phnB; PhnB protein
D S3217 glcG; hypothetical protein K11477 glcG; glc operon protein GlcG
D S2709 putative arsenical resistance protein K11811 arsH; arsenical resistance protein ArsH
D S4670 fhuF; hypothetical protein K13255 fhuF; ferric iron reductase protein FhuF
D S2995 ygcY; putative glucarate dehydratase K13918 gudX; glucarate dehydratase-related protein
D S4396 slyX; host factor for lysis of phiX174 infection K03745 slyX; SlyX protein
D S3540 smg; hypothetical protein K03747 smg; Smg protein
D S4700 creA; hypothetical protein K05805 creA; CreA protein
D S3139 sprT; hypothetical protein K02742 sprT; SprT protein
D S2525 dedD; putative lipoprotein K03749 dedD; DedD protein
D S4356 damX; putative membrane protein K03112 damX; DamX protein
D S2358 sanA; vancomycin resistance protein K03748 sanA; SanA protein
D S2528 dedA; hypothetical protein K03975 dedA; membrane-associated protein
D S1016 pqiA; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D S1508 hypothetical protein K03808 pqiA; paraquat-inducible protein A
D S2479 elaB; hypothetical protein K05594 elaB; ElaB protein
D S3983 yidH; hypothetical protein K00389 yidH; putative membrane protein
D S3628 yjdF; hypothetical protein K08984 yjdF; putative membrane protein
D S1411 ycjF; hypothetical protein K08990 ycjF; putative membrane protein
D S4279 yhhL; hypothetical protein K08993 yhhL; putative membrane protein
D S1319 ychJ; hypothetical protein K09858 K09858; SEC-C motif domain protein
D S0404 ybaY; conserved hypothetical lipoprotein K09914 K09914; putative lipoprotein
D S1045 hyaF; Hydrogenase-1 operon protein hyaF K03618 hyaF; hydrogenase-1 operon protein HyaF
D S1044 hyaE; Hydrogenase-1 operon protein hyaE K03619 hyaE; hydrogenase-1 operon protein HyaE
D S3563 malM; periplasmic protein of mal regulon K05775 malM; maltose operon periplasmic protein
D S3556 yjbA; hypothetical protein K13256 psiE; protein PsiE
D S0334 aroM; protein of aro operon K14591 aroM; protein AroM
D S3615 phnA; hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D S3981 yidF; putative transcriptional regulator K06871 K06871; uncharacterized protein
D S3885 aslB; putative arylsulfatase regulator K06871 K06871; uncharacterized protein
D S1859 putative enzyme K06871 K06871; uncharacterized protein
D S1348 yciG; hypothetical protein K06884 K06884; uncharacterized protein
D S2753 putative enzyme K06889 K06889; uncharacterized protein
D S4615 yjfP; hypothetical protein K06889 K06889; uncharacterized protein
D S0778 ybhM; hypothetical protein K06890 K06890; uncharacterized protein
D S0777 ybhL; hypothetical protein K06890 K06890; uncharacterized protein
D S1410 ycjX; putative nzyme K06918 K06918; uncharacterized protein
D S1033 hypothetical protein K06929 K06929; uncharacterized protein
D S3113 putative DNA-binding protein K06934 K06934; uncharacterized protein
D S1808 hypothetical protein K06938 K06938; uncharacterized protein
D S3193 sap; hypothetical protein K06946 K06946; uncharacterized protein
D S1762 putative transporter K06956 K06956; uncharacterized protein
D S3276 yqiA; hypothetical protein K07000 K07000; uncharacterized protein
D S1192 ycfP; hypothetical protein K07000 K07000; uncharacterized protein
D S2404 yejM; putative sulfatase K07014 K07014; uncharacterized protein
D S4391 yheT; hypothetical protein K07019 K07019; uncharacterized protein
D S0010 yaaH; hypothetical protein K07034 K07034; uncharacterized protein
D S2047 yecA; hypothetical protein K07039 K07039; uncharacterized protein
D S2668 hypothetical protein K07054 K07054; uncharacterized protein
D S2515 putative sugar nucleotide epimerase K07071 K07071; uncharacterized protein
D S4229 hypothetical protein K07089 K07089; uncharacterized protein
D S3409 yraQ; hypothetical protein K07089 K07089; uncharacterized protein
D S2538 yfcA; putative structural protein K07090 K07090; uncharacterized protein
D S2511 yfcE; hypothetical protein K07095 K07095; uncharacterized protein
D S4535 ytfJ; hypothetical protein K07109 K07109; uncharacterized protein
D S3229 hypothetical protein K07109 K07109; uncharacterized protein
D S2068 yedE; putative transport system permease protein K07112 K07112; uncharacterized protein
D S2195 yeeE; putative transport system permease protein K07112 K07112; uncharacterized protein
D S0595 abrB; putative transport protein K07120 K07120; uncharacterized protein
D S3405 yraM; putative glycosylase K07121 K07121; uncharacterized protein
D S0659 ybeQ; hypothetical protein K07126 K07126; uncharacterized protein
D S0656 ybeT; hypothetical protein K07126 K07126; uncharacterized protein
D S3605 yjcO; hypothetical protein K07126 K07126; uncharacterized protein
D S4810 hypothetical protein K07126 K07126; uncharacterized protein
D S2000 yecN; hypothetical protein K07136 K07136; uncharacterized protein
D S3469 yhcC; hypothetical protein K07139 K07139; uncharacterized protein
D S1013 hypothetical protein K07140 K07140; MOSC domain-containing protein
D S2366 yeiB; hypothetical protein K07148 K07148; uncharacterized protein
D S3166 yqgA; putative transport protein K07150 K07150; uncharacterized protein
D S3148 yggU; hypothetical protein K09131 K09131; uncharacterized protein
D S0672 ybeD; hypothetical protein K09158 K09158; uncharacterized protein
D S1258 ycgN; hypothetical protein K09160 K09160; uncharacterized protein
D S2505 hypothetical protein K09161 K09161; uncharacterized protein
D S1546 yoaF; hypothetical protein K09712 K09712; uncharacterized protein
D S0331 yaiI; hypothetical protein K09768 K09768; uncharacterized protein
D S1340 yciI; hypothetical protein K09780 K09780; uncharacterized protein
D S2097 yedI; hypothetical protein K09781 K09781; uncharacterized protein
D S0420 ybaN; hypothetical 14.8kd protein K09790 K09790; uncharacterized protein
D S0977 ycaR; hypothetical protein K09791 K09791; uncharacterized protein
D S1490 ydcH; hypothetical protein K09794 K09794; uncharacterized protein
D S4115 yibQ; hypothetical protein K09798 K09798; uncharacterized protein
D S2855 hypothetical protein K09801 K09801; uncharacterized protein
D S2177 yeeX; putative alpha helix protein K09802 K09802; uncharacterized protein
D S3107 yggE; putative actin K09807 K09807; uncharacterized protein
D S0877 ybjX; putative enzyme K09824 virK; uncharacterized protein
D S1018 ymbA; hypothetical protein K09857 K09857; uncharacterized protein
D S0006 yaaA; hypothetical protein K09861 K09861; uncharacterized protein
D S0100 yacG; hypothetical protein K09862 K09862; uncharacterized protein
D S3664 yjaG; hypothetical protein K09891 K09891; uncharacterized protein
D S3810 yihI; hypothetical protein K09894 K09894; uncharacterized protein
D S3094 ygfB; hypothetical protein K09895 K09895; uncharacterized protein
D S3818 yihD; hypothetical protein K09896 K09896; uncharacterized protein
D S3920 yifE; hypothetical protein K09897 K09897; uncharacterized protein
D S4390 yheU; hypothetical protein K09898 K09898; uncharacterized protein
D S2506 hypothetical protein K09899 K09899; uncharacterized protein
D S1335 hypothetical protein K09901 K09901; uncharacterized protein
D S1256 ycgL; hypothetical protein K09902 K09902; uncharacterized protein
D S2403 yejL; hypothetical protein K09904 K09904; uncharacterized protein
D S2006 yecM; hypothetical protein K09907 K09907; uncharacterized protein
D S3488 yhcB; hypothetical protein K09908 K09908; uncharacterized protein
D S1032 hypothetical protein K09909 K09909; uncharacterized protein
D S0118 yacL; hypothetical protein K09910 K09910; uncharacterized protein
D S1022 ycbG; putative dehydrogenase K09911 K09911; uncharacterized protein
D S1151 yceH; hypothetical protein K09915 K09915; uncharacterized protein
D S1561 hypothetical protein K09916 K09916; uncharacterized protein
D S1532 hypothetical protein K09917 K09917; uncharacterized protein
D S3278 yqiB; putative enzyme K09920 K09920; uncharacterized protein
D S3868 yigA; hypothetical protein K09921 K09921; uncharacterized protein
D S3159 yggL; hypothetical protein K09923 K09923; uncharacterized protein
D S0976 ycaQ; hypothetical protein K09927 K09927; uncharacterized protein
D S2442 hypothetical protein K09934 K09934; uncharacterized protein
D S4599 yjeT; hypothetical protein K09937 K09937; uncharacterized protein
D S2270 hypothetical protein K09946 K09946; uncharacterized protein
D S0692 putative bacteriophage protein K09960 K09960; uncharacterized protein
D S0694 putative bacteriophage protein K09961 K09961; uncharacterized protein
D S0434 ybaP; putative ligase K09973 K09973; uncharacterized protein
D S1601 hypothetical protein K09975 K09975; uncharacterized protein
D S1456 ydbL; hypothetical protein K09978 K09978; uncharacterized protein
D S3412 yhbP; hypothetical protein K09979 K09979; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 13, 2024