+E Transcription factors KO
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Transcription Factors - Sodalis glossinidius
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D SG0727 phage methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D SG2026 putative L-rhamnose operon transcriptional activator K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D SG1549 putative right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SG0402 right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SG1271 putative transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT
C LysR family
D SG1956 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SG2392 lysR-family transcriptional regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D SG0091 lysR-family transcriptional regulatory protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D SG2158 hydrogen peroxide-inducible regulon activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D SG2011 chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D SG1409 cysteine regulon transcriptional activator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D SG0162 putative transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D SG2400 lysR-family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
C DeoR family
D SG2228 deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D SG2326 glycerol-3-phosphate regulon repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D SG0178 L-fucose operon regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
C LacI family
D SG0608 xylitol repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SG0962 mgl repressor and galactose operon inducer K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SG1983 galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SG2371 transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D SG0438 fructose operon repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D SG2333 gluconate utilization operon repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
C GntR family
D SG1855 putative transcriptional regulator K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D SG1139 putative transcriptional regulator K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D SG2040 hypothetical protein K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D SG0466 pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D SG0173 putative transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D SG0241 putative transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D SG0233 putative exu regulon transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D SG0005 putative galactonate operon transcriptional repressor K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
C TetR/AcrR family
D SG0686 AcrAB operon repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D SG2211 tetR-family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D SG0229 putative transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SG2094 putative transcriptional repressor K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D SG2156 conserved hypothetical protein K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D SG1901 hypothetical protein K22294 nicS; TetR/AcrR family transcriptional regulator, upper aerobic nicotinate degradation pathway regulator
C Lrp/AsnC family
D SG2403 transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D SG1107 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D SG1740 transcriptional activator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D SG0285 transcriptional activator protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D SG1239 colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SG2137 putative colanic acid capsular biosynthesis activation protein K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
C MarR family
D SG1443 transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SG1907 putative transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D SG2047 putative transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D SG0020 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
C Fur family
D SG0861 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SG2139 putative regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D SG1318 putative transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D SG2301 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SG1484 fumarate nitrate reduction regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D SG1770 conserved hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
C ArsR family
C XRE family
C PadR family
C Other families
D SG1550 transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D SG1269 hex regulon repressor K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D SG0125 bifunctional protein biotin operon repressor and biotin-acetyl-CoA carboxylase synthase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SG0150 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SG0401 tryptophan operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D SG0361 conserved hypothetical protein K07724 ner; Ner family transcriptional regulator
D SG1893 hypothetical protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D SG0898 putative molybdenum uptake operon transcriptional repressor ModE K02019 modE; molybdate transport system regulatory protein
D SG1159 putative phage repressor K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D SG2164 methionine regulon repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D SG1243 proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D SG0669 cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D SG0115 transcriptional activator K05785 rfaH; transcriptional antiterminator RfaH
D SG1212 hypothetical protein K05785 rfaH; transcriptional antiterminator RfaH
D SG0359 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SG0814 N-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor
D SG1465 putative transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene
D SG0016 mannitol operon repressor K02562 mtlR; mannitol operon repressor
D SG1499 transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D SG1727 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D SG1503 phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D SG1501 phage shock protein C K03973 pspC; phage shock protein C
D SG2023 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D SG0492 dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SG0650 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D SG0440 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0