+E Transcription factors KO #

  Transcription Factors - Sodalis glossinidius

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D SG0727 phage methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D SG2026 putative L-rhamnose operon transcriptional activator K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR D SG1549 putative right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D SG0402 right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D SG1271 putative transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT C LysR family D SG1956 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D SG2392 lysR-family transcriptional regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D SG0091 lysR-family transcriptional regulatory protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D SG2158 hydrogen peroxide-inducible regulon activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D SG2011 chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D SG1409 cysteine regulon transcriptional activator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D SG0162 putative transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D SG2400 lysR-family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator C DeoR family D SG2228 deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D SG2326 glycerol-3-phosphate regulon repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D SG0178 L-fucose operon regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator C LacI family D SG0608 xylitol repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SG0962 mgl repressor and galactose operon inducer K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SG1983 galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SG2371 transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D SG0438 fructose operon repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D SG2333 gluconate utilization operon repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor C GntR family D SG1855 putative transcriptional regulator K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D SG1139 putative transcriptional regulator K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D SG2040 hypothetical protein K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor D SG0466 pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D SG0173 putative transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D SG0241 putative transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D SG0233 putative exu regulon transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D SG0005 putative galactonate operon transcriptional repressor K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor C TetR/AcrR family D SG0686 AcrAB operon repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D SG2211 tetR-family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator D SG0229 putative transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D SG2094 putative transcriptional repressor K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor D SG2156 conserved hypothetical protein K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D SG1901 hypothetical protein K22294 nicS; TetR/AcrR family transcriptional regulator, upper aerobic nicotinate degradation pathway regulator C Lrp/AsnC family D SG2403 transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D SG1107 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D SG1740 transcriptional activator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D SG0285 transcriptional activator protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D SG1239 colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D SG2137 putative colanic acid capsular biosynthesis activation protein K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor C MarR family D SG1443 transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D SG1907 putative transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D SG2047 putative transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D SG0020 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family C Fur family D SG0861 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D SG2139 putative regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D SG1318 putative transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor C CRP/FNR family D SG2301 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D SG1484 fumarate nitrate reduction regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D SG1770 conserved hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor C ArsR family C XRE family C PadR family C Other families D SG1550 transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D SG1269 hex regulon repressor K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D SG0125 bifunctional protein biotin operon repressor and biotin-acetyl-CoA carboxylase synthase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D SG0150 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D SG0401 tryptophan operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D SG0361 conserved hypothetical protein K07724 ner; Ner family transcriptional regulator D SG1893 hypothetical protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator D SG0898 putative molybdenum uptake operon transcriptional repressor ModE K02019 modE; molybdate transport system regulatory protein D SG1159 putative phage repressor K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D SG2164 methionine regulon repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D SG1243 proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D SG0669 cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D SG0115 transcriptional activator K05785 rfaH; transcriptional antiterminator RfaH D SG1212 hypothetical protein K05785 rfaH; transcriptional antiterminator RfaH D SG0359 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D SG0814 N-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor D SG1465 putative transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene D SG0016 mannitol operon repressor K02562 mtlR; mannitol operon repressor D SG1499 transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D SG1727 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D SG1503 phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D SG1501 phage shock protein C K03973 pspC; phage shock protein C D SG2023 conserved hypothetical protein K07735 algH; putative transcriptional regulator D SG0492 dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D SG0650 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR D SG0440 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0