+D GENES KO
#
KEGG Orthology (KO) - Streptococcus pneumoniae D39 (virulent serotype 2)
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:spd00010]
D SPD_0580 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SPD_1897 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SPD_0789 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SPD_0526 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SPD_1404 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SPD_1823 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SPD_0445 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SPD_1468 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SPD_1012 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SPD_0790 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SPD_1028 acoA; TPP-dependent acetoin dehydrogenase alpha-subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SPD_1027 acetoin dehydrogenase, E1 component, beta subunit, putative K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SPD_1026 acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase, putative K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SPD_1025 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SPD_1078 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SPD_1834 alcohol dehydrogenase, iron-containing K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SPD_0265 alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SPD_1636 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SPD_0071 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SPD_1326 pgm; phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SPD_1004 gapN; glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D SPD_0503 bglA-2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SPD_0277 bglA-1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SPD_0247 glycosyl hydrolase, family protein 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SPD_1496 PTS system, IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:spd00020]
D SPD_1025 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SPD_1028 acoA; TPP-dependent acetoin dehydrogenase alpha-subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SPD_1027 acetoin dehydrogenase, E1 component, beta subunit, putative K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SPD_1026 acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase, putative K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:spd00030]
D SPD_1897 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SPD_1100 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SPD_1333 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D SPD_0343 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SPD_1780 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SPD_1839 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SPD_1957 transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SPD_1958 transketolase N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SPD_0723 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SPD_0737 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SPD_0724 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SPD_1326 pgm; phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SPD_0033 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SPD_0980 prs2; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SPD_0289 eda; 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SPD_1004 gapN; glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D SPD_0290 carbohydrate kinase, PfkB family protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D SPD_0526 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SPD_0789 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:spd00040]
D SPD_0143 UDP-glucose 6-dehydrogenase, putative K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SPD_0326 cps2K; UDP-glucose 6-dehydrogenase, putative K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SPD_1919 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SPD_1844 hexulose-6-phosphate synthase, putative K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SPD_1843 hexulose-6-phosphate isomerase, putative K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SPD_1842 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SPD_1780 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SPD_1995 fucK; L-fuculose kinase FucK, putative K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D SPD_1126 alcohol dehydrogenase, zinc-containing K05352 tarJ; ribitol-5-phosphate 2-dehydrogenase (NADP+) [EC:1.1.1.405]
D SPD_1127 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
D SPD_1986 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D SPD_1994 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:spd00051]
D SPD_1531 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SPD_0641 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SPD_1986 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D SPD_1994 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D SPD_1995 fucK; L-fuculose kinase FucK, putative K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D SPD_0789 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SPD_0363 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D SPD_0772 1-phosphofructokinase, putative K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SPD_0526 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SPD_1404 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SPD_0773 PTS system, fructose specific IIABC components K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SPD_0069 PTS system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SPD_1992 PTS system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SPD_0264 manL; PTS system, mannose-specific IIAB components K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SPD_0263 manM; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SPD_0067 PTS system, IIC component K02795 manY; mannose PTS system EIIC component
D SPD_1990 PTS system, IIC component K02795 manY; mannose PTS system EIIC component
D SPD_0262 PTS system, mannose/fructose/sorbose family protein, IID component K02796 manZ; mannose PTS system EIID component
D SPD_1989 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D SPD_0068 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D SPD_0362 mtlA2; PTS system, mannitol-specific enzyme IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SPD_0360 mtlA; PTS system, mannitol-specific IIBC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:spd00052]
D SPD_0071 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SPD_1634 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SPD_1613 galT-1; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SPD_1633 galT-2; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SPD_1648 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SPD_1432 galE-1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SPD_1612 galE-2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SPD_1919 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SPD_1326 pgm; phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SPD_0580 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SPD_0562 bgaA; beta-galactosidase precursor, putative K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SPD_0065 bgaC; Beta-galactosidase 3 K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D SPD_0327 cps2P; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D SPD_1678 aga; alpha-galactosidase AgaN K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SPD_1051 lacC; tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D SPD_0789 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SPD_1050 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SPD_1052 lacB; galactose-6-phosphate isomerase, LacB subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SPD_1053 lacA; galactose-6-phosphate isomerase, LacA subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SPD_0427 lacG-1; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D SPD_1046 lacG-2; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D SPD_0426 lacF-1; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SPD_1048 lacF-2; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SPD_0428 lacE-1; PTS system, lactose-specific IIBC components K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SPD_1047 lacE-2; PTS system, lactose-specific IIBC components K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SPD_1534 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SPD_1582 sucrose-6-phosphate hydrolase, putative K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SPD_0293 PTS system, IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SPD_0295 PTS system, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SPD_0296 PTS system, IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D SPD_0297 PTS system, IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SPD_0070 agaS; sugar isomerase domain protein AgaS K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:spd00053]
D SPD_0143 UDP-glucose 6-dehydrogenase, putative K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SPD_0326 cps2K; UDP-glucose 6-dehydrogenase, putative K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SPD_1845 PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SPD_1846 PTS system, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SPD_1960 PTS system, IIB component, putative K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SPD_1847 PTS system, membrane component, putative K03475 ulaA; ascorbate PTS system EIIC component
D SPD_1959 PTS system, IIC component, putative K03475 ulaA; ascorbate PTS system EIIC component
D SPD_1840 hypothetical protein K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D SPD_1844 hexulose-6-phosphate synthase, putative K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SPD_1843 hexulose-6-phosphate isomerase, putative K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SPD_1842 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:spd00500]
D SPD_1532 PTS system IIABC components K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SPD_1534 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SPD_1582 sucrose-6-phosphate hydrolase, putative K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SPD_1673 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D SPD_1919 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SPD_1830 glycosyl hydrolase, family protein 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D SPD_1833 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SPD_0232 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SPD_0281 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SPD_1832 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SPD_0233 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SPD_0279 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SPD_0283 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_0234 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_1831 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_0424 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_0503 bglA-2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SPD_0277 bglA-1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SPD_0247 glycosyl hydrolase, family protein 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SPD_1006 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SPD_1007 glgD; glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SPD_1008 glgA; glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D SPD_1005 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SPD_1932 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SPD_1002 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D SPD_1215 amy; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SPD_0927 nplT; Neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D SPD_1933 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D SPD_0661 exp5; PTS system, IIABC components K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SPD_0662 endonuclease/exonuclease/phosphatase family protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D SPD_1664 PTS system, trehalose-specific IIABC components K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SPD_1663 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D SPD_1326 pgm; phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SPD_0580 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SPD_1897 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SPD_1531 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:spd00520]
D SPD_0063 strH; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SPD_1969 glycosyl hydrolase-related protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SPD_1866 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SPD_1246 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SPD_1531 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SPD_0248 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SPD_1390 phosphoglucomutase/phosphomannomutase family protein K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SPD_0874 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SPD_0967 murA-1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SPD_1764 murA-2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SPD_1222 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SPD_1172 nanE-2; N-acetylmannosamine-6-phosphate 2-epimerase 2, putative K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D SPD_1497 nanE-1; N-acetylmannosamine-6-phosphate 2-epimerase 2, putative K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D SPD_1163 N-acetylneuraminate lyase, putative K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D SPD_1489 N-acetylneuraminate lyase, putative K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D SPD_1496 PTS system, IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SPD_0580 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SPD_1326 pgm; phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SPD_1919 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SPD_0143 UDP-glucose 6-dehydrogenase, putative K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SPD_0326 cps2K; UDP-glucose 6-dehydrogenase, putative K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SPD_1634 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SPD_1613 galT-1; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SPD_1633 galT-2; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SPD_1648 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SPD_1432 galE-1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SPD_1612 galE-2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SPD_0327 cps2P; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D SPD_0069 PTS system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SPD_1992 PTS system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SPD_0264 manL; PTS system, mannose-specific IIAB components K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SPD_0263 manM; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SPD_0067 PTS system, IIC component K02795 manY; mannose PTS system EIIC component
D SPD_1990 PTS system, IIC component K02795 manY; mannose PTS system EIIC component
D SPD_0262 PTS system, mannose/fructose/sorbose family protein, IID component K02796 manZ; mannose PTS system EIID component
D SPD_1989 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D SPD_0068 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D SPD_1897 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SPD_0641 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SPD_1006 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SPD_1007 glgD; glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:spd00620]
D SPD_1028 acoA; TPP-dependent acetoin dehydrogenase alpha-subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SPD_1027 acetoin dehydrogenase, E1 component, beta subunit, putative K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SPD_1026 acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase, putative K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SPD_1025 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SPD_0420 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SPD_1834 alcohol dehydrogenase, iron-containing K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SPD_0265 alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SPD_1636 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SPD_1853 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SPD_0985 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SPD_0790 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SPD_0390 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SPD_0386 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SPD_0388 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SPD_0389 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SPD_1772 acylphosphatase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SPD_0636 spxB; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D SPD_1078 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SPD_0850 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SPD_1459 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SPD_0953 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:spd00630]
D SPD_0101 hydrolase, haloacid dehalogenase-like family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SPD_0448 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SPD_0910 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SPD_1025 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SPD_1011 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SPD_0289 eda; 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:spd00640]
D SPD_1853 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SPD_0985 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SPD_1025 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SPD_0420 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SPD_0390 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SPD_0386 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SPD_0388 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SPD_0389 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SPD_1078 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SPD_0237 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:spd00650]
D SPD_1834 alcohol dehydrogenase, iron-containing K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SPD_0420 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SPD_1537 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SPD_1865 alcohol dehydrogenase, zinc-containing K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D SPD_0404 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SPD_0405 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SPD_1224 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:spd00660]
D SPD_0404 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SPD_0405 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SPD_1224 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SPD_1113 3-isopropylmalate dehydratase small subunit, putative K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SPD_1115 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:spd00562]
D SPD_1234 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SPD_1404 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:spd00190]
D SPD_1337 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SPD_1335 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SPD_1336 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SPD_1338 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SPD_1334 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SPD_1340 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SPD_1339 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SPD_1341 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SPD_1363 ppaC; manganese-dependent inorganic pyrophosphatase, putative K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:spd00680]
D SPD_0910 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SPD_1012 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SPD_0953 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SPD_0526 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SPD_0789 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SPD_1853 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SPD_0985 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SPD_1468 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:spd00910]
D SPD_1158 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SPD_0448 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SPD_1977 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SPD_0030 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:spd00920]
D SPD_1153 DHH subfamily 1 protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D SPD_0513 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SPD_2037 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SPD_1406 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SPD_1353 Cys/Met metabolism PLP-dependent enzyme, putative K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:spd00061]
D SPD_0390 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SPD_0386 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SPD_0388 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SPD_0389 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SPD_0044 acyl carrier protein, putative K02078 acpP; acyl carrier protein
D SPD_0381 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D SPD_0383 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SPD_0380 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SPD_0385 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SPD_0384 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SPD_0695 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SPD_0387 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SPD_0382 fabK; trans-2-enoyl-ACP reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SPD_0378 enoyl-CoA hydratase/isomerase family protein K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D SPD_0945 AMP-binding enzyme, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:spd00071]
D SPD_0945 AMP-binding enzyme, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SPD_1834 alcohol dehydrogenase, iron-containing K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SPD_0265 alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SPD_1636 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:spd00561]
D SPD_1011 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SPD_0237 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D SPD_2013 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SPD_0043 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SPD_0745 membrane protein, putative K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SPD_1437 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SPD_0961 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SPD_1678 aga; alpha-galactosidase AgaN K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:spd00564]
D SPD_1918 gpsA; (NAD(P)+) glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SPD_2012 glpO; alpha-glycerophosphate oxidase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21]
D SPD_0745 membrane protein, putative K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SPD_1437 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SPD_0880 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SPD_0244 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SPD_2049 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SPD_0185 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:spd00600]
D SPD_0562 bgaA; beta-galactosidase precursor, putative K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SPD_1499 nanB; sialidase B precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D SPD_1504 nanA; sialidase A precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D SPD_1678 aga; alpha-galactosidase AgaN K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SPD_0063 strH; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SPD_1969 glycosyl hydrolase-related protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:spd00230]
D SPD_0875 hydrolase, NUDIX family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SPD_0724 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SPD_1326 pgm; phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SPD_0033 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SPD_0980 prs2; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SPD_0053 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SPD_0058 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SPD_0055 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SPD_0052 phosphoribosylformylglycinamidine synthase, putative K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D SPD_0054 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SPD_0060 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SPD_0059 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SPD_0051 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SPD_0062 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SPD_0057 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SPD_1407 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SPD_0726 purine nucleoside phosphorylase, family protein 2 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SPD_0730 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SPD_0012 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SPD_2055 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SPD_1757 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SPD_1660 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SPD_1628 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D SPD_1274 guaA; GMP synthase, C-terminal domain K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SPD_1107 guaC; guanosine monophosphate reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SPD_1548 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SPD_1042 nrdE; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SPD_1043 nrdF; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SPD_0187 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SPD_1458 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SPD_0982 pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D SPD_0024 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SPD_0214 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SPD_1977 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:spd00240]
D SPD_1131 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SPD_1132 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SPD_1133 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SPD_1030 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SPD_0852 pyrDb; dihydroorotate dehydrogenase, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D SPD_0851 pyrK; dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D SPD_0665 pyrDa; dihydroorotate dehydrogenase A K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D SPD_0609 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SPD_0608 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SPD_0834 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SPD_1757 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SPD_0442 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SPD_1428 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SPD_1068 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SPD_0191 hypothetical protein K00876 udk; uridine kinase [EC:2.7.1.48]
D SPD_1034 hydrolase, haloacid dehalogenase-like family protein K25434 pynA; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D SPD_0649 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SPD_1134 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SPD_0736 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D SPD_0738 cdd-1; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SPD_1164 cdd-2; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SPD_0187 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SPD_1042 nrdE; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SPD_1043 nrdF; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SPD_0648 cytidine and deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SPD_0825 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SPD_0027 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SPD_0904 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SPD_0581 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SPD_1712 oxidoreductase, short chain dehydrogenase/reductase family protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:spd00250]
D SPD_1796 L-asparaginase, putative K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SPD_1768 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SPD_1373 aspC; aspartate aminotransferase K22457 E2.6.1.14; asparagine---oxo-acid transaminase [EC:2.6.1.14]
D SPD_1791 aminotransferase, class I K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SPD_0110 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SPD_0111 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SPD_0024 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SPD_0062 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SPD_1133 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SPD_1158 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SPD_0448 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SPD_1131 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SPD_1132 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SPD_0248 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SPD_0053 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:spd00260]
D SPD_0377 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SPD_0900 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SPD_1195 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SPD_1194 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SPD_1877 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SPD_0910 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SPD_1011 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SPD_1468 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SPD_1712 oxidoreductase, short chain dehydrogenase/reductase family protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D SPD_1025 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SPD_0102 sdhA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SPD_0103 sdhB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SPD_0409 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SPD_1596 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SPD_1597 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:spd00270]
D SPD_0513 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SPD_2037 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SPD_1352 aminotransferase, class II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SPD_0510 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SPD_0664 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SPD_0811 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SPD_0877 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SPD_1190 Atz/Trz family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D SPD_0759 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SPD_0309 luxS; S-ribosylhomocysteine lyase (autoinducer-2 production protein luxS) (AI-2 synthesis protein) K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SPD_0377 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SPD_0900 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SPD_1195 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SPD_1406 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SPD_1353 Cys/Met metabolism PLP-dependent enzyme, putative K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SPD_1073 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D SPD_1074 hypothetical protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D SPD_0749 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SPD_1078 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SPD_0102 sdhA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SPD_0103 sdhB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:spd00280]
D SPD_0749 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SPD_1025 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SPD_1537 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:spd00290]
D SPD_0409 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SPD_1113 3-isopropylmalate dehydratase small subunit, putative K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SPD_1115 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SPD_0404 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SPD_0405 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SPD_0406 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SPD_1956 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SPD_0749 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SPD_1791 aminotransferase, class I K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00300 Lysine biosynthesis [PATH:spd00300]
D SPD_1195 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SPD_0377 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SPD_0900 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SPD_0901 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SPD_1387 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SPD_1923 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SPD_0152 peptidase, M20/M25/M40 family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SPD_1775 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SPD_0041 araT; aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D SPD_1922 peptidase, M20/M25/M40 family protein K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D SPD_1483 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D SPD_1025 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:spd00220]
D SPD_1976 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SPD_0110 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SPD_0111 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SPD_0448 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SPD_1158 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SPD_1977 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SPD_1791 aminotransferase, class I K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00330 Arginine and proline metabolism [PATH:spd00330]
D SPD_0809 cad; lysine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D SPD_0814 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D SPD_0815 hydrolase, carbon-nitrogen family protein K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D SPD_0811 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SPD_0813 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D SPD_0905 acetyltransferase, GNAT family protein K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D SPD_0824 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SPD_0822 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SPD_0823 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D SPD_1834 alcohol dehydrogenase, iron-containing K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SPD_0265 alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SPD_1636 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D SPD_1025 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:spd00400]
D SPD_1510 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SPD_1511 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SPD_1209 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SPD_1211 aroD; 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D SPD_1204 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SPD_1205 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SPD_1208 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SPD_1602 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SPD_1601 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SPD_1600 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SPD_1598 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D SPD_1599 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D SPD_1596 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SPD_1597 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SPD_1151 chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D SPD_1207 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SPD_1203 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:spd00430]
D SPD_0985 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SPD_1853 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:spd00450]
D SPD_1353 Cys/Met metabolism PLP-dependent enzyme, putative K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SPD_1352 aminotransferase, class II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SPD_0510 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SPD_0764 sufS; cysteine desulfurase, SufS subfamily protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SPD_1287 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SPD_0689 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:spd00460]
D SPD_1830 glycosyl hydrolase, family protein 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D SPD_1796 L-asparaginase, putative K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SPD_1768 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SPD_0910 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:spd00470]
D SPD_1508 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SPD_1484 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SPD_2005 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SPD_2003 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SPD_1661 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SPD_0598 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SPD_1775 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:spd00480]
D SPD_0700 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SPD_0685 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SPD_0343 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SPD_1100 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SPD_0286 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SPD_0811 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:spd00511]
D SPD_1499 nanB; sialidase B precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D SPD_1504 nanA; sialidase A precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D SPD_0562 bgaA; beta-galactosidase precursor, putative K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SPD_0063 strH; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SPD_1969 glycosyl hydrolase-related protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SPD_1971 glycosyl hydrolase-related protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D SPD_0853 lytB; endo-beta-N-acetylglucosaminidase precursor, putative K23989 lytD; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96]
D SPD_1974 hypothetical protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D SPD_1467 hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D SPD_1988 hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:spd00541]
D SPD_1919 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SPD_1648 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SPD_1432 galE-1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SPD_1612 galE-2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SPD_0327 cps2P; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D SPD_0143 UDP-glucose 6-dehydrogenase, putative K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SPD_0326 cps2K; UDP-glucose 6-dehydrogenase, putative K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SPD_0328 cps2L; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SPD_0330 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SPD_0329 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SPD_0331 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SPD_0641 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SPD_0874 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SPD_0099 capD; capsular polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00550 Peptidoglycan biosynthesis [PATH:spd00550]
D SPD_0967 murA-1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SPD_1764 murA-2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SPD_1222 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SPD_1349 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SPD_0598 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SPD_1484 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SPD_1483 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SPD_0856 dgkA; diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D SPD_0243 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SPD_0417 bacA; bacitracin resistance protein/undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SPD_0438 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SPD_0307 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SPD_0599 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SPD_0336 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SPD_1821 pbp2A; penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SPD_0767 dacC; penicillin-binding protein 3/D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SPD_0549 lipoprotein, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SPD_1359 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SPD_1416 hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SPD_1417 hypothetical protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SPD_0535 murM_fibA; serine/alanine-adding enzyme MurM K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SPD_0536 fibB; beta-lactam resistance factor K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SPD_1925 pbp1B; penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B
D SPD_1486 penA; penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D SPD_0306 pbpX; penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 00552 Teichoic acid biosynthesis [PATH:spd00552]
D SPD_0417 bacA; bacitracin resistance protein/undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SPD_0438 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SPD_2005 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SPD_2003 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SPD_2004 dltB; protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SPD_2002 dltD; undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine transfer protein K03740 dltD; D-alanine transfer protein
D SPD_1202 psr; Psr protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SPD_1741 transcriptional regulator, putative K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SPD_0961 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SPD_0960 cpoA; glycosyl transferase CpoA K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D SPD_0099 capD; capsular polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D SPD_1619 capsular polysaccharide biosynthesis protein, putative K25626 aatB; UDP-2-acetamido-4-dehydro-2,6-dideoxyglucose transaminase [EC:2.6.1.-]
D SPD_1620 glycosyl transferase, putative K25627 wbgY; AATGal transferase
D SPD_0098 glycosyl transferase, group 2 family protein K25650 K25650; teichoic acid beta-1,3-glucosyltransferase [EC:2.4.1.-]
D SPD_1201 licD3; phosphotransferase LicD3 K25651 licD3; teichoic acid ribitol-phosphate transferase
D SPD_1199 glycosyl transferase, group 2 family protein K25652 K25652; teichoic acid N-acetylgalactosaminyltransferase [EC:2.4.1.-]
D SPD_1200 glycosyl transferase, group 1 family protein K25653 K25653; teichoic acid N-acetylgalactosaminyltransferase [EC:2.4.1.-]
D SPD_1125 pck; choline kinase K25657 licA; choline kinase [EC:2.7.1.32]
D SPD_1123 licC; CTP:phosphocholine cytidylyltransferase K25658 licC; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
D SPD_1129 licD1; phosphotransferase LicD1 K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D SPD_1130 licD2; phosphotransferase LicD2 K25654 licD2; teichoic acid cholinephosphotransferase [EC:2.7.8.-]
D SPD_1198 membrane protein, putative K25659 K25659; teichoic acid polymerase [EC:2.4.1.-]
D SPD_1672 membrane protein, putative K25660 tacL; lipoteichoic acid ligase
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:spd00543]
D SPD_0513 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:spd00730]
D SPD_0632 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SPD_0776 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SPD_0979 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SPD_0777 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SPD_0623 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SPD_0630 hydroxyethylthiazole kinase, putative K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SPD_0624 thiE-1; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SPD_0631 thiE-2; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SPD_1781 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SPD_1779 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D SPD_0214 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SPD_0628 tenA; transcriptional activator TenA, TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D SPD_0622 transcriptional regulator, TENA/THI-4 family protein, putative K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:spd00740]
D SPD_0167 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SPD_0169 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SPD_0266 Cof family protein K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D SPD_0166 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SPD_0168 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SPD_0994 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SPD_0623 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SPD_0630 hydroxyethylthiazole kinase, putative K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SPD_0875 hydrolase, NUDIX family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:spd00750]
D SPD_1423 phosphomethylpyrimidine kinase, putative K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SPD_1877 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SPD_1297 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D SPD_1296 glutamine amidotransferase, SNO family protein, putative K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:spd00760]
D SPD_1826 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D SPD_1251 pncB; nicotinate phosphoribosyltransferase, putative K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SPD_0726 purine nucleoside phosphorylase, family protein 2 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SPD_0730 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SPD_1557 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SPD_1250 nadE; NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SPD_0983 inorganic polyphosphate/ATP-NAD kinase, putative K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:spd00770]
D SPD_0404 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SPD_0405 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SPD_0406 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SPD_1956 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SPD_0733 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D SPD_1088 coaB; phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D SPD_1089 coaC; phosphopantothenoylcysteine decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D SPD_1766 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SPD_0859 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SPD_1509 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SPD_0749 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:spd00780]
D SPD_0385 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SPD_0384 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SPD_0695 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SPD_0387 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SPD_1680 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:spd00785]
D SPD_1024 lipoate-protein ligase, putative K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SPD_1025 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SPD_1028 acoA; TPP-dependent acetoin dehydrogenase alpha-subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SPD_1027 acetoin dehydrogenase, E1 component, beta subunit, putative K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SPD_1026 acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase, putative K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:spd00790]
D SPD_0271 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SPD_0272 sulD; bifunctional folate synthesis protein K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D SPD_0269 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SPD_1401 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SPD_0183 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SPD_0270 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SPD_0167 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SPD_0578 pabB; para-aminobenzoate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D SPD_1568 GTP cyclohydrolase, putative K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:spd00670]
D SPD_1401 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SPD_1087 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SPD_0721 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SPD_0910 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SPD_0055 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SPD_0057 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SPD_1545 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SPD_0581 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SPD_0511 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SPD_1921 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:spd00860]
D SPD_0895 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:spd00900]
D SPD_1537 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SPD_1536 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D SPD_0346 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D SPD_0348 mvaK2; phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D SPD_0347 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D SPD_0349 fni; isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D SPD_1065 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SPD_0243 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SPD_1839 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SPD_1957 transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SPD_1958 transketolase N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:spd00523]
D SPD_0328 cps2L; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SPD_0330 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SPD_0329 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SPD_0331 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D SPD_0330 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:spd00946]
D SPD_1830 glycosyl hydrolase, family protein 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D SPD_1506 acetyl xylan esterase, putative K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:spd00332]
D SPD_0822 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SPD_0823 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:spd00261]
D SPD_0377 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SPD_0900 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SPD_0901 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SPD_1387 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:spd00521]
D SPD_0580 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SPD_1326 pgm; phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SPD_1234 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SPD_0328 cps2L; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SPD_0330 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SPD_0329 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SPD_0331 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SPD_0580 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:spd00525]
D SPD_0328 cps2L; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SPD_0330 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D SPD_1207 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D SPD_1602 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SPD_1601 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SPD_0383 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SPD_0384 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SPD_0695 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SPD_0044 acyl carrier protein, putative K02078 acpP; acyl carrier protein
D SPD_0381 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:spd00999]
D SPD_0664 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SPD_1830 glycosyl hydrolase, family protein 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:spd00362]
D SPD_0072 glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SPD_0903 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00627 Aminobenzoate degradation
D SPD_1772 acylphosphatase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:spd00625]
D SPD_0265 alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SPD_1636 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SPD_1834 alcohol dehydrogenase, iron-containing K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D SPD_0072 glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:spd00622]
D SPD_0072 glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SPD_0903 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D SPD_0072 glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D SPD_0903 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:spd00626]
D SPD_0265 alcohol dehydrogenase, zinc-containing K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SPD_1636 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SPD_1834 alcohol dehydrogenase, iron-containing K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:spd03020]
D SPD_1759 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SPD_1758 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SPD_0218 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SPD_1547 DNA-directed RNA polymerase omega chain, putative K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SPD_0441 DNA-directed RNA polymerase, delta subunit, putative K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:spd03010]
D SPD_0757 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SPD_2042 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SPD_0199 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SPD_0083 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SPD_0210 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SPD_1370 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SPD_0252 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SPD_0207 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SPD_0275 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SPD_0192 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SPD_0217 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SPD_0251 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SPD_0216 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SPD_0206 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SPD_1439 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SPD_0674 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SPD_0202 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SPD_1368 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SPD_0197 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SPD_0732 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SPD_1245 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SPD_0551 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SPD_0196 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SPD_0193 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SPD_0194 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SPD_0205 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SPD_0208 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SPD_1187 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SPD_2031 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SPD_1188 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SPD_0550 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SPD_0274 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SPD_0203 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SPD_0212 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SPD_0200 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SPD_0219 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SPD_0209 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SPD_1148 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SPD_0849 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SPD_0989 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SPD_0198 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SPD_0195 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SPD_0204 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SPD_0991 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SPD_0401 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SPD_0201 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SPD_0211 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SPD_1154 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SPD_1963 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SPD_1964 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SPD_1790 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SPD_0848 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SPD_0016 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_1702 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_1893 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_1816 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_0018 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SPD_1814 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SPD_1700 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SPD_1891 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SPD_0019 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SPD_1890 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SPD_1699 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SPD_1813 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:spd00970]
D SPD_0017 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SPD_1892 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SPD_1701 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SPD_1815 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SPD_1106 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SPD_2066 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SPD_1147 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SPD_1691 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SPD_1805 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SPD_0020 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SPD_2061 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SPD_1697 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SPD_1811 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SPD_1760 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SPD_0756 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SPD_1880 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SPD_2062 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SPD_0015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SPD_1703 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SPD_1894 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SPD_1817 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SPD_1684 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SPD_1888 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SPD_1693 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SPD_1807 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SPD_1881 tRNA-His K14226 tRNA-His; tRNA His
D SPD_1683 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SPD_1887 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SPD_1692 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1806 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1879 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1695 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1809 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1410 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1696 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SPD_1810 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SPD_1581 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SPD_1689 tRNA-Met K14230 tRNA-Met; tRNA Met
D SPD_1688 tRNA-Met K14230 tRNA-Met; tRNA Met
D SPD_1686 tRNA-Met K14230 tRNA-Met; tRNA Met
D SPD_1885 tRNA-Met K14230 tRNA-Met; tRNA Met
D SPD_1685 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SPD_1884 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SPD_1690 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SPD_1804 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SPD_1687 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SPD_1886 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SPD_1682 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SPD_0770 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SPD_0899 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SPD_1694 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SPD_1808 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SPD_1882 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SPD_1883 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SPD_0755 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SPD_1889 tRNA-Val K14237 tRNA-Val; tRNA Val
D SPD_1812 tRNA-Val K14237 tRNA-Val; tRNA Val
D SPD_1698 tRNA-Val K14237 tRNA-Val; tRNA Val
D SPD_1896 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SPD_0397 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SPD_0396 gatB; glu-trnagln amidotransferase subunit b K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SPD_0398 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SPD_1216 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SPD_1941 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SPD_1371 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SPD_1305 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SPD_1304 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SPD_1444 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SPD_0375 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SPD_0515 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SPD_0689 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SPD_1545 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SPD_0494 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SPD_0238 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SPD_1472 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SPD_0620 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SPD_1905 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SPD_0246 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SPD_1950 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SPD_0504 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SPD_0506 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SPD_1926 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SPD_2056 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:spd03060]
D SPD_0213 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D SPD_1820 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D SPD_0861 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D SPD_1838 yajC-2; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SPD_0298 yajC-1; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SPD_1773 SpoIIIJ family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SPD_1850 SpoIIIJ family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SPD_1512 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SPD_1142 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SPD_0026 scRNA; Protein and peptide secretion K01983 ffs; SRP RNA
D SPD_1101 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SPD_0367 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SPD_0819 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:spd04122]
D SPD_0776 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SPD_0979 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SPD_0127 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SPD_0604 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D SPD_0777 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:spd03018]
D SPD_1012 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SPD_0512 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SPD_0862 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SPD_1413 ATP-dependent RNA helicase, putative K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SPD_1549 KH domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SPD_0130 metallo-beta-lactamase superfamily protein domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SPD_0533 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SPD_0789 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SPD_0460 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SPD_1709 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:spd03030]
D SPD_0879 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SPD_0788 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SPD_0254 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SPD_0760 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SPD_0826 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SPD_0666 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SPD_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SPD_2030 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SPD_0957 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SPD_1711 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D SPD_1369 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SPD_1020 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SPD_0368 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SPD_0038 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SPD_1001 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:spd03410]
D SPD_1135 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SPD_1032 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SPD_1086 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SPD_0858 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SPD_0171 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SPD_1626 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SPD_0038 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SPD_0532 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SPD_1001 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:spd03420]
D SPD_0006 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SPD_0176 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D SPD_1096 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D SPD_0538 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D SPD_0973 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SPD_0038 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SPD_1001 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:spd03430]
D SPD_1903 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SPD_0371 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D SPD_0165 hexB; DNA mismatch repair protein HexB K03572 mutL; DNA mismatch repair protein MutL
D SPD_0973 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SPD_1067 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SPD_1066 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SPD_0532 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SPD_1711 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D SPD_1369 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SPD_0788 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SPD_0254 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SPD_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SPD_0760 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SPD_0666 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SPD_0826 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SPD_0879 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SPD_1001 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:spd03440]
D SPD_0532 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SPD_1711 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D SPD_1369 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SPD_2054 recF; recF protein K03629 recF; DNA replication and repair protein RecF
D SPD_0042 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SPD_1485 recR; recombination protein RecR K06187 recR; recombination protein RecR
D SPD_1739 recA; recA protein K03553 recA; recombination protein RecA
D SPD_0038 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SPD_0170 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SPD_0241 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SPD_1507 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SPD_0366 helicase, RecD/TraA family protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SPD_0788 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SPD_0254 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SPD_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SPD_0760 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SPD_0666 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SPD_0826 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SPD_0879 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SPD_1546 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:spd03250]
D SPD_0672 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:spd02010]
D SPD_1609 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SPD_0223 iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SPD_0224 iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SPD_1607 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SPD_0225 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SPD_1608 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SPD_1218 potD; spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SPD_1219 potC; spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D SPD_1220 potH; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D SPD_1221 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SPD_1642 proWX; choline transporter (glycine betaine transport system permease protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D SPD_1643 proV; choline transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SPD_1409 sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SPD_1934 malX; maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SPD_1935 malC; maltodextrin ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SPD_1936 malD; maltodextrin ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SPD_1677 rafE; sugar ABC transporter, sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SPD_1676 rafF; sugar ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SPD_1675 rafG; sugar ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SPD_0090 ABC transporter, substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SPD_0088 ABC transporter, permease protein K17319 lplB; putative aldouronate transport system permease protein
D SPD_0089 ABC transporter, permease protein K17320 lplC; putative aldouronate transport system permease protein
D SPD_0739 putative membrane lipoprotein TmpC precursor K07335 bmpA; basic membrane protein A and related proteins
D SPD_0741 sugar ABC transporter, permease protein, putative K23535 nupB; general nucleoside transport system permease protein
D SPD_0742 sugar ABC transporter, permease protein, putative K23536 nupC; general nucleoside transport system permease protein
D SPD_0740 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SPD_1910 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SPD_1232 phosphate ABC transporter, phosphate-binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D SPD_1911 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D SPD_1231 phosphate ABC transporter, permease protein, putative K02037 pstC; phosphate transport system permease protein
D SPD_1912 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D SPD_1230 phosphate ABC transporter, permease protein, putative K02038 pstA; phosphate transport system permease protein
D SPD_1228 phosphate ABC transporter, ATP-binding protein, putative K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SPD_1229 phosphate ABC transporter, ATP-binding protein, putative K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SPD_1913 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SPD_1098 amino acid ABC transporter, amino acid-binding protein/permease protein K10036 glnH; glutamine transport system substrate-binding protein
D SPD_1099 amino acid ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SPD_0530 amino acid ABC transporter, amino acid-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D SPD_0529 amino acid ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SPD_0528 amino acid ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SPD_0150 ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SPD_1290 amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D SPD_1289 amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SPD_1226 amino acid ABC transporter, amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SPD_0719 amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D SPD_0720 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SPD_0412 amino acid ABC transporter, amino acid-binding protein/permease protein K17073 lysX1; putative lysine transport system substrate-binding protein
D SPD_0411 amino acid ABC transporter, ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D SPD_0652 livJ; branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SPD_0653 livH; branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D SPD_0654 livM; branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D SPD_0655 livG; branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SPD_0656 livF; branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SPD_0151 lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SPD_0154 ABC transporter, permease protein, putative K02072 metI; D-methionine transport system permease protein
D SPD_0153 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SPD_1357 aliB; oligopeptide ABC transporter, oligopeptide-binding protein AliB K15580 oppA; oligopeptide transport system substrate-binding protein
D SPD_1671 amiA; oligopeptide ABC transporter, oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D SPD_1670 amiC; oligopeptide ABC transporter, permease protein AmiC K15581 oppB; oligopeptide transport system permease protein
D SPD_1669 amiD; oligopeptide ABC transporter, permease protein AmiD K15582 oppC; oligopeptide transport system permease protein
D SPD_1668 amiE; oligopeptide ABC transporter, ATP-binding protein AmiE K15583 oppD; oligopeptide transport system ATP-binding protein
D SPD_1667 amiF; oligopeptide ABC transporter, ATP-binding protein AmiF K10823 oppF; oligopeptide transport system ATP-binding protein
D SPD_0915 iron-compound ABC transporter, iron compound-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D SPD_0916 iron-compound ABC transporter, permease protein K23186 fepD; iron-siderophore transport system permease protein
D SPD_0917 iron-compound ABC transporter, permease protein K23187 fepG; iron-siderophore transport system permease protein
D SPD_0918 iron-compound ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D SPD_0888 lmb; adhesion lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D SPD_1997 adcA; zinc ABC transporter, zinc-binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D SPD_1998 adcB; zinc ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D SPD_1999 adcC; zinc ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SPD_1463 ABC transporter, substrate binding lipoprotein K19971 psaA; manganese/zinc transport system substrate-binding protein
D SPD_1462 psaC; manganese ABC transporter, permease protein, putative K19972 psaC; manganese/zinc transport system permease protein
D SPD_1461 psaB; manganese ABC transporter, ATP-binding protein K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D SPD_0684 biotin synthase (BioY family protein), putative K03523 bioY; biotin transport system substrate-specific component
D SPD_0435 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D SPD_2046 cobalt ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D SPD_0627 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D SPD_1266 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D SPD_2048 cbiO2; cobalt ABC transporter, ATP-binding protein CbiO2 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SPD_2047 cbiO1; cobalt ABC transporter, ATP-binding protein CbiO1 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SPD_0805 transporter, permease protein, putative K19084 braE; bacitracin transport system permease protein
D SPD_0804 ABC transporter, ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SPD_0660 ftsX; cell division ABC transporter, permease protein FtsX K09811 ftsX; cell division transport system permease protein
D SPD_0659 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SPD_1263 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D SPD_1264 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D SPD_1622 ABC transporter, ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_1621 ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_1902 ABC transporter, ATP-binding/permease protein K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_1900 ABC transporter, ATP-binding/permease protein K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_1192 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_1191 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_0049 comA; competence factor transporting ATP-binding/permease protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
C 02060 Phosphotransferase system (PTS) [PATH:spd02060]
D SPD_1039 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SPD_1040 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D SPD_1496 PTS system, IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SPD_0661 exp5; PTS system, IIABC components K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SPD_1532 PTS system IIABC components K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SPD_0502 PTS system, beta-glucosides-specific IIABC components K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SPD_1664 PTS system, trehalose-specific IIABC components K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SPD_0362 mtlA2; PTS system, mannitol-specific enzyme IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SPD_0360 mtlA; PTS system, mannitol-specific IIBC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SPD_0426 lacF-1; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SPD_1048 lacF-2; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SPD_0428 lacE-1; PTS system, lactose-specific IIBC components K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SPD_1047 lacE-2; PTS system, lactose-specific IIBC components K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SPD_1833 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SPD_0232 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SPD_0281 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SPD_1832 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SPD_0233 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SPD_0279 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SPD_0283 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_0234 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_1831 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_0424 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_0069 PTS system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SPD_1992 PTS system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SPD_0264 manL; PTS system, mannose-specific IIAB components K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SPD_0263 manM; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SPD_0067 PTS system, IIC component K02795 manY; mannose PTS system EIIC component
D SPD_1990 PTS system, IIC component K02795 manY; mannose PTS system EIIC component
D SPD_0262 PTS system, mannose/fructose/sorbose family protein, IID component K02796 manZ; mannose PTS system EIID component
D SPD_1989 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D SPD_0068 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D SPD_0293 PTS system, IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SPD_0295 PTS system, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SPD_0296 PTS system, IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D SPD_0297 PTS system, IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SPD_0559 PTS system IIA component, putative K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SPD_0560 PTS system, IIB component, putative K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SPD_1057 PTS system, IIB component, putative K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SPD_0561 PTS system, IIC component, putative K20114 gatC; galactose PTS system EIIC component
D SPD_1845 PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SPD_1846 PTS system, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SPD_1960 PTS system, IIB component, putative K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SPD_1847 PTS system, membrane component, putative K03475 ulaA; ascorbate PTS system EIIC component
D SPD_1959 PTS system, IIC component, putative K03475 ulaA; ascorbate PTS system EIIC component
D SPD_0773 PTS system, fructose specific IIABC components K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SPD_0772 1-phosphofructokinase, putative K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:spd03070]
D SPD_1820 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D SPD_0861 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D SPD_0213 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D SPD_1838 yajC-2; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SPD_0298 yajC-1; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SPD_1773 SpoIIIJ family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SPD_1850 SpoIIIJ family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SPD_1512 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SPD_1101 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SPD_1142 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:spd02020]
D SPD_1909 pnpS; sensor histidine kinase PnpS K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SPD_1908 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SPD_1910 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SPD_1232 phosphate ABC transporter, phosphate-binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D SPD_2068 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SPD_1084 sensory box sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SPD_1085 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D SPD_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SPD_0082 sensor histidine kinase K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D SPD_0081 DNA-binding response regulator K10682 saeR; two-component system, OmpR family, response regulator SaeR
D SPD_0805 transporter, permease protein, putative K19084 braE; bacitracin transport system permease protein
D SPD_0804 ABC transporter, ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SPD_1445 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SPD_1446 DNA-binding response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SPD_2005 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SPD_2004 dltB; protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SPD_2003 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SPD_2002 dltD; undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine transfer protein K03740 dltD; D-alanine transfer protein
D SPD_0702 ciaH; sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SPD_0701 ciaR; DNA-binding response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SPD_0549 lipoprotein, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SPD_1753 serine protease, subtilase family protein K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D SPD_0469 blpH; histidine kinase BlpH, putative K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SPD_0468 blpR; response regulator BlpR K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SPD_0049 comA; competence factor transporting ATP-binding/permease protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D SPD_0050 comB; competence factor transport protein ComB K12293 comB; competence factor transport accessory protein ComB
D SPD_2065 comC1; competence-stimulating peptide type 1 K12415 comC; competence-stimulating peptide
D SPD_2064 comD; putative sensor histidine kinase ComD K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D SPD_2063 comE; response regulator K12295 comE; two-component system, LytTR family, response regulator ComE
D SPD_0014 comX1; transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
D SPD_1818 comX2; transcriptional regulator ComX2 K12296 comX1_2; competence protein ComX
D SPD_0010 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SPD_1799 sensor histidine kinase, putative K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SPD_1798 DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D SPD_0351 sensor histidine kinase, putative K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SPD_0352 DNA-binding response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D SPD_0448 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SPD_0575 sensor histidine kinase, putative K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SPD_0157 sensor histidine kinase, putative K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SPD_0158 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D SPD_1837 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:spd02024]
D SPD_0309 luxS; S-ribosylhomocysteine lyase (autoinducer-2 production protein luxS) (AI-2 synthesis protein) K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SPD_1602 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SPD_1601 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SPD_1510 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SPD_1511 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SPD_0652 livJ; branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SPD_0653 livH; branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D SPD_0654 livM; branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D SPD_0655 livG; branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SPD_0656 livF; branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SPD_0945 AMP-binding enzyme, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SPD_0169 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SPD_0469 blpH; histidine kinase BlpH, putative K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SPD_0468 blpR; response regulator BlpR K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SPD_1726 ply; pneumolysin K11031 slo; thiol-activated cytolysin
D SPD_2065 comC1; competence-stimulating peptide type 1 K12415 comC; competence-stimulating peptide
D SPD_0049 comA; competence factor transporting ATP-binding/permease protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D SPD_0050 comB; competence factor transport protein ComB K12293 comB; competence factor transport accessory protein ComB
D SPD_2064 comD; putative sensor histidine kinase ComD K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D SPD_2063 comE; response regulator K12295 comE; two-component system, LytTR family, response regulator ComE
D SPD_0702 ciaH; sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SPD_0701 ciaR; DNA-binding response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SPD_1357 aliB; oligopeptide ABC transporter, oligopeptide-binding protein AliB K15580 oppA; oligopeptide transport system substrate-binding protein
D SPD_1671 amiA; oligopeptide ABC transporter, oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D SPD_1670 amiC; oligopeptide ABC transporter, permease protein AmiC K15581 oppB; oligopeptide transport system permease protein
D SPD_1669 amiD; oligopeptide ABC transporter, permease protein AmiD K15582 oppC; oligopeptide transport system permease protein
D SPD_1668 amiE; oligopeptide ABC transporter, ATP-binding protein AmiE K15583 oppD; oligopeptide transport system ATP-binding protein
D SPD_1667 amiF; oligopeptide ABC transporter, ATP-binding protein AmiF K10823 oppF; oligopeptide transport system ATP-binding protein
D SPD_1786 transcriptional regulator PlcR, putative K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D SPD_0014 comX1; transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
D SPD_1818 comX2; transcriptional regulator ComX2 K12296 comX1_2; competence protein ComX
D SPD_0470 blpC; peptide pheromone BlpC K20343 blpC; peptide pheromone BlpC
D SPD_0115 hypothetical protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D SPD_1952 transcriptional activator, Rgg/GadR/MutR family protein, C-terminal domain K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D SPD_0939 transcriptional activator, Rgg/GadR/MutR family protein K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D SPD_0750 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SPD_0334 aliA; oligopeptide ABC transporter, oligopeptide-binding protein AliA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SPD_1170 oligopeptide ABC transporter,oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SPD_1169 oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SPD_1168 oligopeptide ABC transporter, pemease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SPD_1167 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SPD_1050 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SPD_1773 SpoIIIJ family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SPD_1850 SpoIIIJ family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SPD_1820 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D SPD_0861 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D SPD_0213 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D SPD_1838 yajC-2; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SPD_0298 yajC-1; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SPD_1512 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SPD_1101 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SPD_1142 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SPD_1753 serine protease, subtilase family protein K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:spd02040]
D SPD_0150 ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SPD_0958 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SPD_1012 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
D SPD_1617 cell wall surface anchor family protein K13925 pfbA; plasmin and fibronectin-binding protein A
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:spd01501]
D SPD_0010 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SPD_1357 aliB; oligopeptide ABC transporter, oligopeptide-binding protein AliB K15580 oppA; oligopeptide transport system substrate-binding protein
D SPD_1671 amiA; oligopeptide ABC transporter, oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D SPD_1670 amiC; oligopeptide ABC transporter, permease protein AmiC K15581 oppB; oligopeptide transport system permease protein
D SPD_1669 amiD; oligopeptide ABC transporter, permease protein AmiD K15582 oppC; oligopeptide transport system permease protein
D SPD_1668 amiE; oligopeptide ABC transporter, ATP-binding protein AmiE K15583 oppD; oligopeptide transport system ATP-binding protein
D SPD_1667 amiF; oligopeptide ABC transporter, ATP-binding protein AmiF K10823 oppF; oligopeptide transport system ATP-binding protein
D SPD_0336 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SPD_1925 pbp1B; penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B
D SPD_1821 pbp2A; penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SPD_1486 penA; penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D SPD_0306 pbpX; penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 01502 Vancomycin resistance [PATH:spd01502]
D SPD_1484 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SPD_1508 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SPD_1483 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SPD_0307 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SPD_0599 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SPD_0549 lipoprotein, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:spd01503]
D SPD_2068 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SPD_0672 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SPD_2005 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SPD_2004 dltB; protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SPD_2003 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SPD_2002 dltD; undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine transfer protein K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:spd01000]
C 01001 Protein kinases [BR:spd01001]
D SPD_1542 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SPD_0318 cps2D; tyrosine-protein kinase Cps2D cytosolic ATPase domain K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SPD_1909 pnpS; sensor histidine kinase PnpS K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SPD_1084 sensory box sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SPD_0082 sensor histidine kinase K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D SPD_1445 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SPD_0702 ciaH; sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SPD_1799 sensor histidine kinase, putative K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SPD_0351 sensor histidine kinase, putative K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SPD_0469 blpH; histidine kinase BlpH, putative K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SPD_2064 comD; putative sensor histidine kinase ComD K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D SPD_0575 sensor histidine kinase, putative K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SPD_0157 sensor histidine kinase, putative K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:spd01009]
D SPD_0789 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SPD_1543 phosphatase, putative K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:spd01002]
D SPD_0819 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SPD_0261 pepC; aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D SPD_0753 pcp; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D SPD_1274 guaA; GMP synthase, C-terminal domain K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SPD_0974 class I glutamine amidotransferase, putative K07010 K07010; putative glutamine amidotransferase
D SPD_1899 glutamine amidotransferase, class 1 K07010 K07010; putative glutamine amidotransferase
D SPD_0049 comA; competence factor transporting ATP-binding/permease protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D SPD_2043 secreted 45 kDa protein precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SPD_0053 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SPD_0248 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SPD_0707 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative K03152 thiJ; protein deglycase [EC:3.5.1.124]
D SPD_1076 srtA; sortase K07284 srtA; sortase A [EC:3.4.22.70]
D SPD_1097 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D SPD_0172 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D SPD_0817 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D SPD_0146 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D SPD_0147 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D SPD_1944 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D SPD_0268 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D SPD_1180 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D SPD_0473 blpY; immunity protein BlpY K07052 K07052; CAAX protease family protein
D SPD_0475 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D SPD_0700 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SPD_0866 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D SPD_1460 pepO; endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D SPD_0549 lipoprotein, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SPD_0542 pepV; dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D SPD_0152 peptidase, M20/M25/M40 family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SPD_0894 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SPD_1922 peptidase, M20/M25/M40 family protein K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D SPD_0970 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SPD_1418 pepQ; proline dipeptidase PepQ K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D SPD_0177 peptidase M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SPD_1018 iga; immunoglobulin A1 protease precursor K01390 iga; IgA-specific metalloendopeptidase [EC:3.4.24.13]
D SPD_0577 zmpB; zinc metalloprotease ZmpB K08643 zmpB; zinc metalloprotease ZmpB [EC:3.4.24.-]
D SPD_0258 pepS; aminopeptidase PepS K19689 ampS; aminopeptidase [EC:3.4.11.-]
D SPD_0013 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SPD_1647 pepA; glutamyl aminopeptidase PepA K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D SPD_0547 hypothetical protein K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D SPD_1138 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SPD_0245 eep; zinc metalloprotease Eep K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SPD_2068 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SPD_1753 serine protease, subtilase family protein K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D SPD_1178 prolyl oligopeptidase family protein K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D SPD_0767 dacC; penicillin-binding protein 3/D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SPD_0650 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SPD_0787 pepX; Xaa-Pro dipeptidyl-peptidase PepX K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D SPD_1765 hypothetical protein K07177 K07177; Lon-like protease
D SPD_0367 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SPD_1258 peptidase, U32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D SPD_1256 peptidase, U32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:spd01003]
D SPD_0961 glycosyl transferase, group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SPD_0960 cpoA; glycosyl transferase CpoA K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D SPD_1008 glgA; glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D SPD_0336 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SPD_1925 pbp1B; penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B
D SPD_1821 pbp2A; penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SPD_1620 glycosyl transferase, putative K25627 wbgY; AATGal transferase
D SPD_0098 glycosyl transferase, group 2 family protein K25650 K25650; teichoic acid beta-1,3-glucosyltransferase [EC:2.4.1.-]
D SPD_1199 glycosyl transferase, group 2 family protein K25652 K25652; teichoic acid N-acetylgalactosaminyltransferase [EC:2.4.1.-]
D SPD_1200 glycosyl transferase, group 1 family protein K25653 K25653; teichoic acid N-acetylgalactosaminyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:spd01005]
D SPD_0320 cps2T; glycosyl transferase, group 1 family protein, putative K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D SPD_1431 glycosyl transferase, group 2 family protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:spd01011]
D SPD_0967 murA-1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SPD_1764 murA-2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SPD_1222 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SPD_1349 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SPD_0598 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SPD_1359 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SPD_1484 ddlA; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SPD_0535 murM_fibA; serine/alanine-adding enzyme MurM K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SPD_0536 fibB; beta-lactam resistance factor K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SPD_1508 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SPD_1661 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SPD_0307 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SPD_0599 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SPD_0417 bacA; bacitracin resistance protein/undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SPD_0438 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SPD_0336 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SPD_1925 pbp1B; penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B
D SPD_1821 pbp2A; penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SPD_1486 penA; penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D SPD_0306 pbpX; penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
D SPD_0767 dacC; penicillin-binding protein 3/D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SPD_0549 lipoprotein, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SPD_2043 secreted 45 kDa protein precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SPD_1076 srtA; sortase K07284 srtA; sortase A [EC:3.4.22.70]
D SPD_1346 putative BCR, putative K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:spd01004]
D SPD_0383 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SPD_0380 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SPD_0385 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SPD_0384 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SPD_0695 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SPD_0387 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SPD_0382 fabK; trans-2-enoyl-ACP reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SPD_0378 enoyl-CoA hydratase/isomerase family protein K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D SPD_0945 AMP-binding enzyme, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SPD_0043 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SPD_0745 membrane protein, putative K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SPD_1437 acyltransferase domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:spd01006]
D SPD_1065 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SPD_0243 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SPD_0583 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:spd01007]
D SPD_1896 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SPD_1926 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SPD_2056 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SPD_0515 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SPD_1905 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SPD_0689 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SPD_1472 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SPD_0494 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SPD_0238 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SPD_0620 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SPD_1941 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SPD_1371 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SPD_1950 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SPD_1305 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SPD_1304 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SPD_0375 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SPD_0246 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SPD_1444 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SPD_1216 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SPD_0504 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SPD_0506 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SPD_1791 aminotransferase, class I K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SPD_0041 araT; aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D SPD_1352 aminotransferase, class II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SPD_0749 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SPD_0578 pabB; para-aminobenzoate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:spd00194]
D SPD_1334 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SPD_1335 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SPD_1336 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SPD_1337 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SPD_1338 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SPD_1339 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SPD_1341 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SPD_1340 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:spd03000]
D SPD_1044 lacR2; lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D SPD_0771 lacR1; lactose phosphotransferase system repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SPD_1635 galR; galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SPD_1586 sugar-binding transcriptional regulator, LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SPD_1938 malR; maltose operon transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SPD_1797 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SPD_1535 scrR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D SPD_1665 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D SPD_1829 transcriptional regulator, GntR family protein K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D SPD_1275 transcriptional regulator, GntR family protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D SPD_1645 transcriptional regulator, MarR family protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D SPD_0447 transcriptional regulator, MerR family protein K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D SPD_1637 transcriptional regulator, MerR family protein K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D SPD_0691 transcriptional regulator, PadR family protein K10947 K10947; PadR family transcriptional regulator
D SPD_0096 transcriptional regulator, PadR family protein K10947 K10947; PadR family transcriptional regulator
D SPD_1450 iron-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D SPD_1680 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SPD_0930 transcriptional regulator, putative K18830 pezA; HTH-type transcriptional regulator / antitoxin PezA
D SPD_1786 transcriptional regulator PlcR, putative K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D SPD_1952 transcriptional activator, Rgg/GadR/MutR family protein, C-terminal domain K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D SPD_0939 transcriptional activator, Rgg/GadR/MutR family protein K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D SPD_1776 purR; pur operon repressor PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D SPD_0976 hypothetical protein K01926 rex; redox-sensing transcriptional repressor
D SPD_1412 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D SPD_1253 transcriptional repressor, putative K07729 K07729; putative transcriptional regulator
D SPD_1947 transcriptional regulator, putative K07729 K07729; putative transcriptional regulator
D SPD_0303 transcriptional regulator, putative K07729 K07729; putative transcriptional regulator
D SPD_0501 licT; transcription antiterminator Lict K03488 licT; beta-glucoside operon transcriptional antiterminator
D SPD_1841 transcriptional regulator, BglG family protein K03493 bglG1; transcriptional antiterminator
D SPD_0361 transcriptional regulator, putative K03483 mtlR; mannitol operon transcriptional activator
D SPD_0280 transcriptional regulator, putative K03491 licR; probable licABCH operon transcriptional regulator
D SPD_2069 SpoJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SPD_1049 lacT; transcription antiterminator LacT K02531 lacT; transcriptional antiterminator
D SPD_0786 transcriptional regulator of arginine metabolism expression, putative K03402 argR; transcriptional regulator of arginine metabolism
D SPD_1063 transcriptional regulator of arginine metabolism expression, putative K03402 argR; transcriptional regulator of arginine metabolism
D SPD_1904 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SPD_0458 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D SPD_0628 tenA; transcriptional activator TenA, TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D SPD_0622 transcriptional regulator, TENA/THI-4 family protein, putative K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D SPD_2023 ctsR; transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D SPD_0803 hypothetical protein K03973 pspC; phage shock protein C
D SPD_1134 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SPD_1523 transcriptional regulator, NrdR family protein K07738 nrdR; transcriptional repressor NrdR
D SPD_0014 comX1; transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
D SPD_1818 comX2; transcriptional regulator ComX2 K12296 comX1_2; competence protein ComX
C 03021 Transcription machinery [BR:spd03021]
D SPD_0218 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SPD_1759 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SPD_1758 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SPD_0441 DNA-directed RNA polymerase, delta subunit, putative K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SPD_1547 DNA-directed RNA polymerase omega chain, putative K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SPD_0958 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D SPD_0479 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SPD_0393 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D SPD_1819 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D SPD_1345 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:spd03019]
D SPD_1105 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SPD_0130 metallo-beta-lactamase superfamily protein domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SPD_0533 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SPD_1549 KH domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SPD_0862 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SPD_1777 cbf1; cmp-binding-factor 1 K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D SPD_1413 ATP-dependent RNA helicase, putative K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SPD_0663 ATP-dependent RNA helicase, DEAD/DEAH box family protein K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SPD_1012 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SPD_0512 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SPD_0789 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SPD_0460 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SPD_1709 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SPD_1396 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:spd03011]
D SPD_0757 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SPD_2042 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SPD_0199 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SPD_0083 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SPD_0210 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SPD_1370 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SPD_0252 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SPD_0207 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SPD_0275 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SPD_0192 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SPD_0217 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SPD_0251 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SPD_0216 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SPD_0206 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SPD_1439 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SPD_0674 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SPD_0202 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SPD_1368 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SPD_0197 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SPD_0732 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SPD_1245 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SPD_0551 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SPD_0196 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SPD_0193 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SPD_0194 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SPD_0205 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SPD_0208 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SPD_2031 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SPD_1188 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SPD_0550 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SPD_1187 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SPD_0274 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SPD_0203 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SPD_0212 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SPD_0200 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SPD_0219 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SPD_0209 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SPD_1148 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SPD_0849 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SPD_0989 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SPD_0198 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SPD_0195 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SPD_0204 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SPD_0991 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SPD_0401 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SPD_0201 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SPD_0211 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SPD_1154 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SPD_1963 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SPD_1964 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SPD_1790 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SPD_0848 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SPD_0019 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SPD_1890 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SPD_1699 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SPD_1813 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SPD_0016 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_1702 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_1893 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_1816 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_0018 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SPD_1814 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SPD_1700 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SPD_1891 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:spd03009]
D SPD_1105 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SPD_0857 era; GTP-binding protein Era K03595 era; GTPase
D SPD_0964 GTP1/Obg family GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D SPD_0479 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SPD_0393 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D SPD_1819 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D SPD_0592 rsuA-2; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SPD_0260 rsuA-1; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SPD_1782 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SPD_1544 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SPD_0735 methyltransferase small domain, putative K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SPD_1767 type II DNA modification methyltransferase, putative K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SPD_1572 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SPD_1140 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SPD_0304 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SPD_0828 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SPD_1064 hemolysin A, putative K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D SPD_1929 rrmA; rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D SPD_1286 TrmH family RNA methyltransferase group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SPD_2067 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SPD_1212 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SPD_0669 radical SAM enzyme, Cfr family protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SPD_0914 rumA-1; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SPD_1654 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SPD_0820 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SPD_0984 ribosomal large subunit pseudouridine synthase, RluD subfamily protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SPD_1822 ribosomal large subunit pseudouridine synthase, RluD subfamily protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SPD_0135 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SPD_0678 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D SPD_1573 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SPD_0181 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SPD_0516 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D SPD_1413 ATP-dependent RNA helicase, putative K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SPD_0663 ATP-dependent RNA helicase, DEAD/DEAH box family protein K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SPD_1781 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SPD_1519 phosphoglycerate dehydrogenase-related protein K03977 engA; GTPase
D SPD_1019 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
D SPD_0584 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D SPD_1559 GTP-binding protein K06948 yqeH; 30S ribosome assembly GTPase
D SPD_0908 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SPD_1458 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SPD_0483 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SPD_0478 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D SPD_2053 hypothetical protein K14761 rlbA; ribosome-associated protein
D SPD_1554 iojap-related protein K09710 ybeB; ribosome-associated protein
D SPD_0855 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D SPD_1558 conserved hypothetical protein TIGR00253 K07574 yhbY; RNA-binding protein
D SPD_2033 yfiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D SPD_0004 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D SPD_1136 putative ACR K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:spd03016]
D SPD_0586 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D SPD_1386 polyA polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SPD_0246 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SPD_1472 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SPD_0238 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SPD_0689 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SPD_1905 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SPD_0620 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SPD_1941 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SPD_1216 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SPD_1371 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SPD_1444 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SPD_0375 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SPD_0515 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SPD_0494 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SPD_1950 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SPD_0504 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SPD_0506 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SPD_1926 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SPD_2056 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SPD_1457 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SPD_0463 Hit-like protein involved in cell-cycle regulation, putative K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SPD_0477 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SPD_1424 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SPD_1070 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SPD_0776 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SPD_0979 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SPD_0908 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SPD_0583 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SPD_0902 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SPD_0129 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA(glucose-inhibited division protein A) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SPD_1851 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SPD_0340 rnpB; Ribonuclease P - RNA component K01978 rnpB; M1 RNA
D SPD_1305 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SPD_1304 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SPD_1896 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SPD_0871 regulatory protein, putative K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D SPD_0025 cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SPD_2016 TIM-barrel protein, nifR3 family protein, putative K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SPD_0833 gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SPD_0679 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SPD_1435 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D SPD_0436 TrmH family RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SPD_1771 SpoU rRNA Methylase family protein K03437 spoU; RNA methyltransferase, TrmH family
D SPD_0127 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SPD_1247 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SPD_1568 GTP cyclohydrolase, putative K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SPD_1868 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SPD_0777 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SPD_0011 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SPD_0134 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SPD_0136 glycoprotease family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SPD_1743 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SPD_1552 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D SPD_0862 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SPD_0512 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:spd03012]
D SPD_0482 infB; initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SPD_0847 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SPD_0998 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SPD_2041 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D SPD_1318 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D SPD_0253 fusA; translation elongation factor G K02355 fusA; elongation factor G
D SPD_0906 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SPD_0835 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D SPD_0907 hemK; HemK protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SPD_0005 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SPD_0215 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SPD_0395 efp; translation elongation factor P K02356 efp; elongation factor P
D SPD_0658 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D SPD_0399 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:spd03110]
D SPD_2022 ATP-dependent Clp protease, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D SPD_0717 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D SPD_0308 clpL; ATP-dependent Clp protease, ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D SPD_1399 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SPD_0460 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SPD_1709 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SPD_0461 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SPD_2015 hslO; chaperonin, 33 kDa K04083 hslO; molecular chaperone Hsp33
D SPD_0459 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SPD_1710 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D SPD_2068 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SPD_0013 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SPD_1340 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SPD_0063 strH; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SPD_1969 glycosyl hydrolase-related protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SPD_0672 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SPD_1367 Cof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SPD_0868 protease maturation protein, putative K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D SPD_1567 trx; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:spd04131]
D SPD_1757 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SPD_1971 glycosyl hydrolase-related protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D SPD_1823 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SPD_1468 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SPD_0790 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:spd03032]
D SPD_0997 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SPD_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SPD_2030 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SPD_0957 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SPD_1522 hypothetical protein K03346 dnaB; replication initiation and membrane attachment protein
D SPD_1521 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D SPD_1711 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D SPD_1369 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SPD_0788 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SPD_0254 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SPD_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SPD_0666 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SPD_0826 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SPD_0879 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SPD_0760 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SPD_1020 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SPD_0368 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SPD_0038 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SPD_1001 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SPD_1077 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SPD_0709 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SPD_0748 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SPD_0746 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SPD_1120 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:spd03036]
D SPD_1105 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SPD_0997 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SPD_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SPD_1402 non-heme iron-containing ferritin K04047 dps; starvation-inducible DNA-binding protein
D SPD_1104 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D SPD_1656 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D SPD_1655 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D SPD_1480 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SPD_0008 septum formation initiator, putative K13052 divIC; cell division protein DivIC
D SPD_0659 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SPD_0774 SpoE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SPD_0305 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D SPD_0600 divIB; cell division protein DivIB K03589 ftsQ; cell division protein FtsQ
D SPD_0952 cell division protein FtsW, putative K03588 ftsW; cell division protein FtsW
D SPD_0660 ftsX; cell division ABC transporter, permease protein FtsX K09811 ftsX; cell division transport system permease protein
D SPD_1479 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SPD_0710 ezrA; septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D SPD_1474 divIVA; cell division protein DivIVA K04074 divIVA; cell division initiation protein
D SPD_1477 ylmF; YlmF protein K09772 sepF; cell division inhibitor SepF
D SPD_2045 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D SPD_2044 rod shpae-determining protein MreD, putative K03571 mreD; rod shape-determining protein MreD
D SPD_0706 rod shape-determining protein RodA, putative K05837 rodA; rod shape determining protein RodA
D SPD_2069 SpoJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SPD_0748 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SPD_0746 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SPD_0129 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA(glucose-inhibited division protein A) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SPD_1140 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SPD_0833 gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SPD_0496 cell filamentation protein Fic-related protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D SPD_1398 GTP-binding protein K03978 engB; GTP-binding protein
D SPD_1394 putative BCR K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:spd03400]
D SPD_1292 ogt; methylated-DNA--protein-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SPD_1032 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SPD_1086 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SPD_1135 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SPD_1031 mutX; Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SPD_0644 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SPD_1092 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SPD_0715 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SPD_1574 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SPD_0027 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SPD_0171 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SPD_0858 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SPD_1626 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SPD_0532 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SPD_1001 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SPD_0038 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SPD_0176 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D SPD_1096 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D SPD_0538 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D SPD_0973 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SPD_1759 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SPD_1758 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SPD_0218 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SPD_0441 DNA-directed RNA polymerase, delta subunit, putative K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SPD_1547 DNA-directed RNA polymerase omega chain, putative K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SPD_0006 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SPD_1903 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SPD_0371 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D SPD_0165 hexB; DNA mismatch repair protein HexB K03572 mutL; DNA mismatch repair protein MutL
D SPD_1067 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SPD_1066 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SPD_0788 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SPD_0254 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SPD_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SPD_0666 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SPD_0826 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SPD_0879 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SPD_0760 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SPD_1711 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D SPD_1369 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SPD_0366 helicase, RecD/TraA family protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SPD_1739 recA; recA protein K03553 recA; recombination protein RecA
D SPD_0170 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SPD_0241 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SPD_1546 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SPD_0029 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D SPD_2054 recF; recF protein K03629 recF; DNA replication and repair protein RecF
D SPD_1507 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SPD_0042 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SPD_1485 recR; recombination protein RecR K06187 recR; recombination protein RecR
D SPD_1062 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D SPD_0337 recU; recombination protein U K03700 recU; recombination protein U
D SPD_1016 rexA; exonuclease RexA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D SPD_1015 rexB; ATP-dependent exonuclease RexB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D SPD_1077 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SPD_0709 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SPD_1120 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SPD_0997 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SPD_0419 dinP; DNA-damage inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SPD_1705 recX; regulatory protein RecX K03565 recX; regulatory protein
D SPD_0705 DnaQ family exonuclease/DinG family helicase, putative K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SPD_1042 nrdE; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SPD_1043 nrdF; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SPD_1153 DHH subfamily 1 protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:spd03029]
D SPD_0482 infB; initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SPD_0847 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SPD_2041 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D SPD_1318 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D SPD_0253 fusA; translation elongation factor G K02355 fusA; elongation factor G
D SPD_0857 era; GTP-binding protein Era K03595 era; GTPase
D SPD_1926 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SPD_0238 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SPD_1941 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SPD_1905 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SPD_0397 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SPD_0396 gatB; glu-trnagln amidotransferase subunit b K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SPD_0398 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SPD_1711 single-strand binding protein family protein K03111 ssb; single-strand DNA-binding protein
D SPD_1369 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SPD_0460 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SPD_0459 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SPD_1709 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SPD_1710 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D SPD_0461 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SPD_0776 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SPD_0979 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SPD_1773 SpoIIIJ family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SPD_1850 SpoIIIJ family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:spd02000]
D SPD_1263 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D SPD_1264 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D SPD_1622 ABC transporter, ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_1621 ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_1902 ABC transporter, ATP-binding/permease protein K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_1900 ABC transporter, ATP-binding/permease protein K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_1192 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_1191 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SPD_1721 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SPD_1160 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SPD_0049 comA; competence factor transporting ATP-binding/permease protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D SPD_0140 ABC transporter, ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D SPD_1177 drug efflux ABC transporter, ATP-binding/permease protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D SPD_1385 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D SPD_1354 hypothetical protein K02021 ABC.MR; putative ABC transport system ATP-binding protein
D SPD_1355 hypothetical protein K02021 ABC.MR; putative ABC transport system ATP-binding protein
D SPD_1609 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SPD_0223 iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SPD_0224 iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SPD_1607 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SPD_0225 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SPD_1608 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SPD_1218 potD; spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SPD_1219 potC; spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D SPD_1220 potH; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D SPD_1221 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SPD_1642 proWX; choline transporter (glycine betaine transport system permease protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D SPD_1643 proV; choline transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SPD_1409 sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SPD_1934 malX; maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SPD_1935 malC; maltodextrin ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SPD_1936 malD; maltodextrin ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SPD_1677 rafE; sugar ABC transporter, sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SPD_1676 rafF; sugar ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SPD_1675 rafG; sugar ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SPD_0090 ABC transporter, substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SPD_0088 ABC transporter, permease protein K17319 lplB; putative aldouronate transport system permease protein
D SPD_0089 ABC transporter, permease protein K17320 lplC; putative aldouronate transport system permease protein
D SPD_1585 ABC transporter, sugar-binding protein K10120 msmE; fructooligosaccharide transport system substrate-binding protein
D SPD_1584 ABC transporter, permease protein K10121 msmF; fructooligosaccharide transport system permease protein
D SPD_1583 ABC transporter, permease protein K10122 msmG; fructooligosaccharide transport system permease protein
D SPD_0739 putative membrane lipoprotein TmpC precursor K07335 bmpA; basic membrane protein A and related proteins
D SPD_0741 sugar ABC transporter, permease protein, putative K23535 nupB; general nucleoside transport system permease protein
D SPD_0742 sugar ABC transporter, permease protein, putative K23536 nupC; general nucleoside transport system permease protein
D SPD_0740 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SPD_1495 sugar ABC transporter, sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SPD_1502 ABC transporter, substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SPD_1501 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D SPD_1494 sugar ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D SPD_1500 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D SPD_1493 sugar ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D SPD_1910 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SPD_1232 phosphate ABC transporter, phosphate-binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D SPD_1911 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D SPD_1231 phosphate ABC transporter, permease protein, putative K02037 pstC; phosphate transport system permease protein
D SPD_1912 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D SPD_1230 phosphate ABC transporter, permease protein, putative K02038 pstA; phosphate transport system permease protein
D SPD_1228 phosphate ABC transporter, ATP-binding protein, putative K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SPD_1229 phosphate ABC transporter, ATP-binding protein, putative K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SPD_1913 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SPD_1098 amino acid ABC transporter, amino acid-binding protein/permease protein K10036 glnH; glutamine transport system substrate-binding protein
D SPD_1099 amino acid ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SPD_0530 amino acid ABC transporter, amino acid-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D SPD_0529 amino acid ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SPD_0528 amino acid ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SPD_0150 ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SPD_1290 amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D SPD_1289 amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SPD_1226 amino acid ABC transporter, amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SPD_0719 amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D SPD_0720 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SPD_0652 livJ; branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SPD_0653 livH; branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D SPD_0654 livM; branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D SPD_0655 livG; branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SPD_0656 livF; branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SPD_0151 lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SPD_0154 ABC transporter, permease protein, putative K02072 metI; D-methionine transport system permease protein
D SPD_0153 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SPD_0954 hypothetical protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D SPD_0955 amino acid or sugar ABC transport system permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D SPD_0956 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D SPD_0412 amino acid ABC transporter, amino acid-binding protein/permease protein K17073 lysX1; putative lysine transport system substrate-binding protein
D SPD_0411 amino acid ABC transporter, ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D SPD_1328 aatB; amino acid ABC transporter, amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SPD_0540 amino acid ABC transporter, amino acid-binding protein, putative K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SPD_0109 amino acid ABC transporter, periplasmic amino acid-binding protein, putative K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SPD_1330 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D SPD_0618 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D SPD_0617 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D SPD_1329 amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SPD_0616 amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SPD_1357 aliB; oligopeptide ABC transporter, oligopeptide-binding protein AliB K15580 oppA; oligopeptide transport system substrate-binding protein
D SPD_1671 amiA; oligopeptide ABC transporter, oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D SPD_1670 amiC; oligopeptide ABC transporter, permease protein AmiC K15581 oppB; oligopeptide transport system permease protein
D SPD_1669 amiD; oligopeptide ABC transporter, permease protein AmiD K15582 oppC; oligopeptide transport system permease protein
D SPD_1668 amiE; oligopeptide ABC transporter, ATP-binding protein AmiE K15583 oppD; oligopeptide transport system ATP-binding protein
D SPD_1667 amiF; oligopeptide ABC transporter, ATP-binding protein AmiF K10823 oppF; oligopeptide transport system ATP-binding protein
D SPD_0750 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SPD_0334 aliA; oligopeptide ABC transporter, oligopeptide-binding protein AliA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SPD_1170 oligopeptide ABC transporter,oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SPD_1169 oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SPD_1168 oligopeptide ABC transporter, pemease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SPD_1167 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SPD_0915 iron-compound ABC transporter, iron compound-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D SPD_0916 iron-compound ABC transporter, permease protein K23186 fepD; iron-siderophore transport system permease protein
D SPD_0917 iron-compound ABC transporter, permease protein K23187 fepG; iron-siderophore transport system permease protein
D SPD_0918 iron-compound ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D SPD_1652 iron-compound ABC transporter, iron-compound-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D SPD_1650 iron-compound ABC transporter, permease protein K25283 yclO; iron-siderophore transport system permease protein
D SPD_1649 iron-compound ABC transporter, permease protein K25284 yclN; iron-siderophore transport system permease protein
D SPD_1651 iron-compound ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D SPD_0888 lmb; adhesion lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D SPD_1997 adcA; zinc ABC transporter, zinc-binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D SPD_1998 adcB; zinc ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D SPD_1999 adcC; zinc ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SPD_1463 ABC transporter, substrate binding lipoprotein K19971 psaA; manganese/zinc transport system substrate-binding protein
D SPD_1462 psaC; manganese ABC transporter, permease protein, putative K19972 psaC; manganese/zinc transport system permease protein
D SPD_1461 psaB; manganese ABC transporter, ATP-binding protein K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D SPD_0684 biotin synthase (BioY family protein), putative K03523 bioY; biotin transport system substrate-specific component
D SPD_0432 membrane protein, putative K16924 mtsT; energy-coupling factor transport system substrate-specific component
D SPD_1265 membrane protein, putative K16926 htsT; energy-coupling factor transport system substrate-specific component
D SPD_0155 membrane protein, putative K16926 htsT; energy-coupling factor transport system substrate-specific component
D SPD_0435 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D SPD_2046 cobalt ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D SPD_0627 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D SPD_1266 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D SPD_2048 cbiO2; cobalt ABC transporter, ATP-binding protein CbiO2 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SPD_2047 cbiO1; cobalt ABC transporter, ATP-binding protein CbiO1 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SPD_0434 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SPD_0626 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SPD_1267 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SPD_0625 membrane protein, putative K16925 ykoE; energy-coupling factor transport system permease protein
D SPD_0805 transporter, permease protein, putative K19084 braE; bacitracin transport system permease protein
D SPD_0804 ABC transporter, ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SPD_0688 efflux ABC transporter, permease protein K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D SPD_0687 ABC transporter ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D SPD_0660 ftsX; cell division ABC transporter, permease protein FtsX K09811 ftsX; cell division transport system permease protein
D SPD_0659 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SPD_0556 membrane protein, putative K25154 evrC; viologen exporter family transport system permease protein
D SPD_0555 membrane protein, putative K25155 evrB; viologen exporter family transport system permease protein
D SPD_0554 ABC transporter, ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D SPD_0465 ABC transporter, permease protein, putative K25157 ecsB; ABC-2 type transport system permease protein
D SPD_0464 ABC transporter, ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D SPD_0606 membrane protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D SPD_1213 membrane protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D SPD_0846 membrane protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D SPD_1527 membrane protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D SPD_1254 membrane protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D SPD_1800 membrane protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D SPD_1526 membrane protein, putative K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SPD_1214 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SPD_1525 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SPD_0845 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SPD_1528 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SPD_0614 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SPD_1255 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SPD_1514 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SPD_1801 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SPD_0596 membrane protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D SPD_1785 immunity protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D SPD_0521 vex1; ABC transporter, transmembrane protein Vexp1 K02004 ABC.CD.P; putative ABC transport system permease protein
D SPD_0523 vex3; ABC transporter, transmembrane protein Vexp3 K02004 ABC.CD.P; putative ABC transport system permease protein
D SPD_1465 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SPD_1824 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SPD_0597 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SPD_0108 amino acid ABC transporter, ATP-binding protein, putative K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SPD_1755 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SPD_1784 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SPD_0522 vex2; ABC transporter, ATP-binding protein Vexp2 K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SPD_1466 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SPD_1176 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SPD_0762 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SPD_1029 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D SPD_1738 dinF; MATE efflux family protein DinF K26937 dinF; MATE family, multidrug efflux pump
D SPD_1876 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D SPD_1414 oxalate:formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D SPD_0097 transporter, putative K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D SPD_0860 pmrA; multi-drug resistance efflux pump K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D SPD_1039 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SPD_1040 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D SPD_1496 PTS system, IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SPD_0661 exp5; PTS system, IIABC components K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SPD_1532 PTS system IIABC components K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SPD_0502 PTS system, beta-glucosides-specific IIABC components K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SPD_1664 PTS system, trehalose-specific IIABC components K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SPD_0773 PTS system, fructose specific IIABC components K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SPD_0362 mtlA2; PTS system, mannitol-specific enzyme IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SPD_0360 mtlA; PTS system, mannitol-specific IIBC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SPD_0426 lacF-1; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SPD_1048 lacF-2; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SPD_0428 lacE-1; PTS system, lactose-specific IIBC components K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SPD_1047 lacE-2; PTS system, lactose-specific IIBC components K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SPD_1833 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SPD_0232 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SPD_0281 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SPD_1832 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SPD_0233 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SPD_0279 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SPD_0283 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_0234 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_1831 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_0424 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D SPD_0559 PTS system IIA component, putative K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SPD_0560 PTS system, IIB component, putative K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SPD_1057 PTS system, IIB component, putative K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SPD_0561 PTS system, IIC component, putative K20114 gatC; galactose PTS system EIIC component
D SPD_0264 manL; PTS system, mannose-specific IIAB components K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SPD_0069 PTS system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SPD_1992 PTS system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SPD_0263 manM; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SPD_0067 PTS system, IIC component K02795 manY; mannose PTS system EIIC component
D SPD_1990 PTS system, IIC component K02795 manY; mannose PTS system EIIC component
D SPD_0262 PTS system, mannose/fructose/sorbose family protein, IID component K02796 manZ; mannose PTS system EIID component
D SPD_1989 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D SPD_0068 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D SPD_0293 PTS system, IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SPD_0295 PTS system, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SPD_0296 PTS system, IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D SPD_0297 PTS system, IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SPD_1845 PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SPD_1846 PTS system, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SPD_1960 PTS system, IIB component, putative K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SPD_1847 PTS system, membrane component, putative K03475 ulaA; ascorbate PTS system EIIC component
D SPD_1959 PTS system, IIC component, putative K03475 ulaA; ascorbate PTS system EIIC component
D SPD_1569 aquaporin K06188 aqpZ; aquaporin Z
D SPD_2011 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D SPD_1320 glycerol uptake facilitator protein, putative K02440 glpF; glycerol uptake facilitator
D SPD_0896 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D SPD_1562 small conductance mechanosensitive ion channel (MscS) family protein K22044 ybiO; moderate conductance mechanosensitive channel
D SPD_0175 magnesium transporter, CorA family protein K03284 corA; magnesium transporter
D SPD_1150 crcB2; CrcB protein K06199 crcB; fluoride exporter
D SPD_1149 crcB1; CrcB protein K06199 crcB; fluoride exporter
D SPD_1761 CBS domain membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SPD_1638 cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D SPD_1563 dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein K07862 sstT; serine/threonine transporter
D SPD_0569 sodium/hydrogen exchanger family protein K24163 nhaK; monovalent cation/hydrogen antiporter
D SPD_0076 potassium uptake protein, Trk family protein K03498 trkH; trk/ktr system potassium uptake protein
D SPD_0429 potassium uptake protein, Trk family protein K03498 trkH; trk/ktr system potassium uptake protein
D SPD_0077 potassium uptake protein, Trk family protein K03499 trkA; trk/ktr system potassium uptake protein
D SPD_0430 potassium uptake protein, Trk family protein K03499 trkA; trk/ktr system potassium uptake protein
D SPD_1141 uraA; uracil-xanthine permease K02824 uraA; uracil permease
D SPD_1629 pbuX; xanthine permease K16169 pbuX; xanthine permease
D SPD_0267 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D SPD_1021 voltage-gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D SPD_0443 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter
D SPD_0149 hypothetical protein K26605 azlC; branched chain amino acid efflux pump
D SPD_0437 membrane protein, putative K23675 fmnP; riboflavin transporter
D SPD_1091 membrane protein, putative K16788 niaX; niacin transporter
D SPD_0806 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D SPD_0952 cell division protein FtsW, putative K03588 ftsW; cell division protein FtsW
D SPD_1155 hypothetical protein K07243 FTR; high-affinity iron transporter
D SPD_1156 Dyp-type peroxidase family protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D SPD_0278 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D SPD_0571 ccdA-1; cytochrome c-type biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D SPD_0885 ccdA-2; cytochrome c-type biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D SPD_0115 hypothetical protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D SPD_0686 efflux transporter, RND family protein, MFP subunit K24950 yknX; membrane fusion protein, antimicrobial resistance system
D SPD_0318 cps2D; tyrosine-protein kinase Cps2D cytosolic ATPase domain K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SPD_0317 cps2C; chain length determinant protein/polysaccharide export protein, MPA1 family protein K19420 epsA; protein tyrosine kinase modulator
D SPD_1640 pnuC; nicotinamide mononucleotide transporter PnuC, putative K03811 pnuC; nicotinamide mononucleotide transporter
D SPD_1606 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:spd02044]
D SPD_1476 ylmG; YlmG protein K02221 yggT; YggT family protein
D SPD_0843 celA; competence protein CelA K02237 comEA; competence protein ComEA
D SPD_0648 cytidine and deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SPD_0844 celB; competence protein CelB K02238 comEC; competence protein ComEC
D SPD_2035 helicase, putative K02240 comFA; competence protein ComFA
D SPD_2034 competence protein ComF, putative K02242 comFC; competence protein ComFC
D SPD_1863 cglA; competence protein CglA K02243 comGA; competence protein ComGA
D SPD_1862 cglB; competence protein CglB K02244 comGB; competence protein ComGB
D SPD_1861 cglC; competence protein CglC K02245 comGC; competence protein ComGC
D SPD_1860 clgD; competence protein CglD K02246 comGD; competence protein ComGD
D SPD_1858 hypothetical protein K02248 comGF; competence protein ComGF
D SPD_1593 type IV prepilin peptidase, putative K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SPD_1512 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SPD_1820 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D SPD_0861 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D SPD_0213 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D SPD_1142 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SPD_1101 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SPD_1838 yajC-2; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SPD_0298 yajC-1; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SPD_1773 SpoIIIJ family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SPD_1850 SpoIIIJ family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:spd02042]
D SPD_0374 exfoliative toxin, putative K11041 eta; exfoliative toxin A/B
D SPD_1726 ply; pneumolysin K11031 slo; thiol-activated cytolysin
D SPD_1761 CBS domain membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SPD_1295 hemolysin K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:spd02022]
D SPD_1909 pnpS; sensor histidine kinase PnpS K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SPD_1908 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SPD_1084 sensory box sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SPD_1085 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D SPD_0082 sensor histidine kinase K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D SPD_0081 DNA-binding response regulator K10682 saeR; two-component system, OmpR family, response regulator SaeR
D SPD_1445 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SPD_1446 DNA-binding response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SPD_0702 ciaH; sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SPD_0701 ciaR; DNA-binding response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SPD_1799 sensor histidine kinase, putative K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SPD_1798 DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D SPD_0351 sensor histidine kinase, putative K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SPD_0352 DNA-binding response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D SPD_0469 blpH; histidine kinase BlpH, putative K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SPD_0468 blpR; response regulator BlpR K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SPD_2064 comD; putative sensor histidine kinase ComD K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D SPD_2063 comE; response regulator K12295 comE; two-component system, LytTR family, response regulator ComE
D SPD_0575 sensor histidine kinase, putative K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SPD_0157 sensor histidine kinase, putative K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SPD_0158 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:spd02035]
D SPD_0150 ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:spd04812]
D SPD_1479 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SPD_1480 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SPD_2069 SpoJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:spd04147]
D SPD_1012 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SPD_1823 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SPD_0445 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SPD_0790 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SPD_0672 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SPD_1709 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SPD_0460 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SPD_1897 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SPD_2055 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SPD_1318 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D SPD_0463 Hit-like protein involved in cell-cycle regulation, putative K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SPD_1078 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SPD_0945 AMP-binding enzyme, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SPD_0214 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SPD_1407 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SPD_0111 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SPD_0110 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SPD_1974 hypothetical protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D SPD_1634 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SPD_1005 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SPD_2013 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SPD_0448 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SPD_0057 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SPD_1025 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SPD_1100 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SPD_1404 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SPD_1468 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:spd02048]
D SPD_0455 hsdR; type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SPD_0784 type I restriction-modification system, R subunit, putative K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SPD_0453 hsdS; type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SPD_0450 type I restriction-modification system, S subunit, putative K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SPD_0451 type I restriction-modification system, S subunit, putative K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SPD_0782 type I restriction-modification system, M subunit, putative K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SPD_0454 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SPD_1631 Dam-replacing family protein K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D SPD_1079 type II restriction endonuclease, putative K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D SPD_1080 type II restriction endonuclease, putative K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D SPD_1854 hypothetical protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D SPD_1260 type II DNA modification methyltransferase, putative K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D SPD_1081 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D SPD_0256 conserved hypothetical protein TIGR00053 K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D SPD_0255 addiction module antitoxin, RelB/DinJ family protein, putative K07473 dinJ; DNA-damage-inducible protein J
D SPD_1550 addiction module toxin, Txe/YoeB family protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D SPD_1551 prevent-host-death family protein K19159 yefM; antitoxin YefM
D SPD_0803 hypothetical protein K03973 pspC; phage shock protein C
D SPD_0931 hypothetical protein K16214 pezT; UDP-N-acetylglucosamine kinase [EC:2.7.1.176]
D SPD_0930 transcriptional regulator, putative K18830 pezA; HTH-type transcriptional regulator / antitoxin PezA
D SPD_1479 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SPD_0748 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SPD_0746 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SPD_0776 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SPD_0979 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:spd04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:spd04090]
C 01504 Antimicrobial resistance genes [BR:spd01504]
D SPD_0549 lipoprotein, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SPD_2005 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SPD_2004 dltB; protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SPD_2003 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SPD_2002 dltD; undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine transfer protein K03740 dltD; D-alanine transfer protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:spd03100]
D SPD_0017 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SPD_1892 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SPD_1701 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SPD_1815 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SPD_1106 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SPD_2066 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SPD_1147 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SPD_1691 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SPD_1805 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SPD_0020 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SPD_2061 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SPD_1697 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SPD_1811 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SPD_1760 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SPD_0756 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SPD_1880 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SPD_2062 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SPD_0015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SPD_1703 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SPD_1894 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SPD_1817 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SPD_1684 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SPD_1888 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SPD_1693 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SPD_1807 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SPD_1881 tRNA-His K14226 tRNA-His; tRNA His
D SPD_1683 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SPD_1887 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SPD_1692 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1806 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1879 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1695 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1809 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1410 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SPD_1696 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SPD_1810 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SPD_1581 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SPD_1689 tRNA-Met K14230 tRNA-Met; tRNA Met
D SPD_1688 tRNA-Met K14230 tRNA-Met; tRNA Met
D SPD_1686 tRNA-Met K14230 tRNA-Met; tRNA Met
D SPD_1885 tRNA-Met K14230 tRNA-Met; tRNA Met
D SPD_1685 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SPD_1884 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SPD_1690 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SPD_1804 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SPD_1687 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SPD_1886 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SPD_1682 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SPD_0770 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SPD_0899 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SPD_1694 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SPD_1808 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SPD_1882 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SPD_1883 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SPD_0755 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SPD_1889 tRNA-Val K14237 tRNA-Val; tRNA Val
D SPD_1812 tRNA-Val K14237 tRNA-Val; tRNA Val
D SPD_1698 tRNA-Val K14237 tRNA-Val; tRNA Val
D SPD_0016 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_1702 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_1893 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_1816 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SPD_0018 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SPD_1814 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SPD_1700 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SPD_1891 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SPD_0019 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SPD_1890 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SPD_1699 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SPD_1813 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SPD_0026 scRNA; Protein and peptide secretion K01983 ffs; SRP RNA
D SPD_0340 rnpB; Ribonuclease P - RNA component K01978 rnpB; M1 RNA
D SPD_0769 ssrA; ssrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SPD_0292 oxidoreductase, short chain dehydrogenase/reductase family protein K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D SPD_0621 lctO; lactate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D SPD_0812 lys1; saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D SPD_1193 msrAB1; peptide methionine sulfoxide reductase msrA/msrB 1 K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D SPD_0573 msrAB2; peptide methionine sulfoxide reductase msrA/msrB 2 K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D SPD_1382 glutathione S-transferase family protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SPD_1464 psaD; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SPD_1393 pyridine nucleotide-disulfide oxidoreductase family protein K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SPD_0190 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SPD_1774 pflA; pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SPD_0229 glycyl-radical enzyme activating protein family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SPD_0864 tehB; tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D SPD_0341 RNA methylase family protein UPF0020, putative K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D SPD_0505 acetyltransferase, GNAT family protein K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SPD_1243 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SPD_1300 thiamine biosynthesis protein ApbE, putative K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SPD_0403 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D SPD_1392 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D SPD_1244 hprK; Hpr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SPD_0525 vncS; sensor histidine kinase VncS K10819 E2.7.13.3; histidine kinase [EC:2.7.13.3]
D SPD_0534 estA; tributyrin esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D SPD_0316 cps2B; tyrosine-protein phosphatase CpsB K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D SPD_1560 HAD superfamily protein (subfamily IIIA) phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D SPD_2032 DHH subfamily 1 protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D SPD_1788 hydrolase, TatD family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SPD_1787 primase-related protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D SPD_0311 dexB; glucan 1,6-alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D SPD_0335 cell wall surface anchor family protein K17624 engCP; endo-alpha-N-acetylgalactosaminidase [EC:3.2.1.97]
D SPD_0294 glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D SPD_1737 lytA; autolysin/N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SPD_1285 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SPD_1381 def-2; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SPD_1309 pgdA; peptidoglycan GlcNAc deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D SPD_0941 hypothetical protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D SPD_1397 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SPD_0722 YjeF-like protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D SPD_0287 hyaluronate lyase precursor K01727 hysA; hyaluronate lyase [EC:4.2.2.1]
D SPD_1993 fucU; RbsD/FucU transport protein family protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D SPD_1383 cation-transporting ATPase, E1-E2 family protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SPD_1436 cation-transporting ATPase, E1-E2 family protein K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D SPD_0657 acetoin utilization protein AcuB, putative K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D SPD_1430 fer; ferredoxin K05337 fer; ferredoxin
D SPD_0765 SUF system FeS assembly protein, NifU family protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D SPD_1415 oxidoreductase, pyridine nucleotide-disulfide, class I K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D SPD_1388 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D SPD_0996 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D SPD_0160 nrdI protein, putative K03647 nrdI; protein involved in ribonucleotide reduction
D SPD_1762 DNA-entry nuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D SPD_1478 ylmE; YlmE protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SPD_1236 spx; regulatory protein Spx K16509 spxA; regulatory protein spx
D SPD_0178 hypothetical protein K16509 spxA; regulatory protein spx
D SPD_0802 S1 RNA binding domain K06959 tex; protein Tex
C 99974 Translation
D SPD_1366 general stress protein 13, putative K07570 GSP13; general stress protein 13
C 99975 Protein processing
D SPD_0365 tig; trigger factor K03545 tig; trigger factor
D SPD_0863 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D SPD_1041 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D SPD_1196 mecA; adapter protein mecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D SPD_0975 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SPD_1778 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D SPD_1364 hypothetical protein K07461 K07461; putative endonuclease
D SPD_1122 DNA processing protein DprA, putative K04096 smf; DNA processing protein
D SPD_1405 hypothetical protein K02086 dnaD; DNA replication protein
D SPD_1580 ATPase, AAA family protein K07478 ycaJ; putative ATPase
D SPD_1342 IS1239, transposase, putative K07482 K07482; transposase, IS30 family
D SPD_0807 IS1239, transposase, putative K07482 K07482; transposase, IS30 family
D SPD_1272 IS66 family element, Orf2 K07484 K07484; transposase
D SPD_1708 IS1167, transposase K07485 K07485; transposase
D SPD_0413 hypothetical protein K07486 K07486; transposase
D SPD_1906 IS1381, transposase OrfB K07492 K07492; putative transposase
D SPD_1967 IS1381, transposase OrfB K07492 K07492; putative transposase
D SPD_1324 IS630-Spn1, transposase Orf2 K07494 K07494; putative transposase
D SPD_0869 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D SPD_0987 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SPD_0887 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SPD_0642 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D SPD_0372 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SPD_0546 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D SPD_0342 hypothetical protein K20073 mapZ; mid-cell-anchored protein Z
D SPD_1849 protein jag (SpoIIIJ-associated protein), putative K06346 jag; spoIIIJ-associated protein
D SPD_0921 site-specific recombinase, resolvase family protein K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D SPD_0593 elongation factor Tu family protein K06207 typA; GTP-binding protein
D SPD_0220 hypothetical protein K07166 K07166; ACT domain-containing protein
D SPD_0838 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D SPD_0873 hypothetical protein K07273 acm; lysozyme
C 99994 Others
D SPD_1614 phosphate transport system regulatory protein PhoU, putative K02039 phoU; phosphate transport system protein
D SPD_1914 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D SPD_1227 phosphate transport system regulatory protein PhoU, putative K02039 phoU; phosphate transport system protein
D SPD_1118 cutC; copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SPD_0865 coiA; competence protein CoiA K06198 coiA; competence protein CoiA
D SPD_1713 hypothetical protein K06878 K06878; tRNA-binding protein
D SPD_0766 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D SPD_0763 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D SPD_0570 ribonuclease BN, putative K07058 K07058; membrane protein
D SPD_0091 hypothetical protein K07146 K07146; UPF0176 protein
D SPD_1139 lemA; LemA protein K03744 lemA; LemA protein
D SPD_0872 membrane protein, putative K08974 K08974; putative membrane protein
D SPD_0797 hypothetical protein K08986 ycgQ; putative membrane protein
D SPD_1871 hypothetical protein K08987 K08987; putative membrane protein
D SPD_1427 phnA; PhnA protein K06193 phnA; protein PhnA
C 99997 Function unknown
D SPD_1145 hypothetical protein K06885 K06885; uncharacterized protein
D SPD_1769 membrane protein, putative K06890 K06890; uncharacterized protein
D SPD_0039 hypothetical protein K06929 K06929; uncharacterized protein
D SPD_0675 hypothetical protein K06960 K06960; uncharacterized protein
D SPD_0778 hypothetical protein K07017 K07017; uncharacterized protein
D SPD_0798 membrnae protein, putative K07089 K07089; uncharacterized protein
D SPD_1659 phosphodiesterase, MJ0936 family protein K07095 K07095; uncharacterized protein
D SPD_1093 transcriptional regulator, biotin repressor family protein K07105 K07105; uncharacterized protein
D SPD_1440 hypothetical protein K07118 K07118; uncharacterized protein
D SPD_0587 oxidoreductase, short chain dehydrogenase/reductase family protein K07124 K07124; uncharacterized protein
D SPD_1653 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein
D SPD_0488 hypothetical protein K09155 K09155; uncharacterized protein
D SPD_1972 hypothetical protein K09704 K09704; uncharacterized protein
D SPD_1907 hypothetical protein K09705 K09705; uncharacterized protein
D SPD_1143 hypothetical protein K09787 K09787; uncharacterized protein
D SPD_1119 hypothetical protein K09790 K09790; uncharacterized protein
D SPD_0836 hypothetical protein K00243 K00243; uncharacterized protein
D SPD_1378 hypothetical protein K09861 K09861; uncharacterized protein
D SPD_0242 hypothetical protein K09962 K09962; uncharacterized protein
D SPD_1662 hypothetical protein K09976 K09976; uncharacterized protein
D SPD_0990 hypothetical protein K07584 ysxB; uncharacterized protein
D SPD_1706 hypothetical protein K07586 ygaC; uncharacterized protein
D SPD_0480 hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 19, 2024