+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Schizosaccharomyces pombe (fission yeast)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D SPBC2D10.10c fib1; fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D SPBC646.10c putative U3 snoRNP protein Nop56 K14564 NOP56; nucleolar protein 56 D SPAC23G3.06 putative U3 snoRNP protein Nop58 K14565 NOP58; nucleolar protein 58 D SPAC607.03c snu13; U3 snoRNP-associated protein Snu13 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D SPAC29A4.04c cbf5; putative pseudouridylate synthase Cbf5 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D SPBC20F10.01 gar1; H/ACA snoRNP pseudouridylase subunit Gar1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D SPAC1782.10c nhp2; box H/ACA snoRNP complex subunit Nhp2 K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D SPAP27G11.13c nop10; putative snoRNP complex protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D SPBC30D10.15 putative snoRNP assembly factor Naf1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 D SPBC8D2.13 shq1; putative box H/ACA snoRNP assembly protein Shq1 K14764 SHQ1; protein SHQ1 B 90S particles C U3 small nucleolar RNA-associated proteins D SPAC19D5.05c imp3; putative U3 snoRNP-associated protein Imp3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D SPAC19A8.07c putative U3 snoRNP-associated protein Imp4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D SPAC23C11.03 putative U3 snoRNP-associated protein Mpp1 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D SPAC18B11.06 putative U3 snoRNP-associated protein Lcp5 K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D SPBC776.17 putative rRNA processing protein Rrp7 K14545 RRP7; ribosomal RNA-processing protein 7 D SPBC713.04c putative U3 snoRNP-associated protein Utp1 K14558 PWP2; periodic tryptophan protein 2 D SPBC3F6.04c nop14; putative U3 snoRNP protein Nop14 K14766 NOP14; nucleolar protein 14 D SPBC3B8.09 putative U3 snoRNP-associated protein Utp3 K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D SPBC19F5.02c utp4; putative U3 snoRNP protein Utp4 K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D SPCC1450.03 putative ribonucleoprotein complex protein K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D SPAC20H4.01 utp5; putative U3 snoRNP-associated protein Utp5 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D SPBC244.02c putative U3 snoRNP-associated protein Utp6 K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D SPAC959.03c putative U3 snoRNP-associated protein Utp7 K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D SPBC23E6.04c utp10; putative U3 snoRNP-associated protein Utp10 K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D SPAC18G6.06 putative U3 snoRNP-associated protein Utp11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D SPBC3D6.12 putative U3 snoRNA associated protein Dip2 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D SPCC16A11.02 utp13; putative U3 snoRNP-associated protein Utp13 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D SPAC57A7.06 putative U3 snoRNP protein Utp14 K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D SPBC428.19c utp15; putative U3 snoRNP protein Utp15 K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D SPAC1B3.13 putative U3 snoRNP-associated protein Nan1 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D SPBC29A3.06 putative CGI-48 family protein K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D SPBC1604.06c putative Mak21 family protein K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D SPBC56F2.04 utp20; putative U3 snoRNP protein Utp20 K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D SPCC1672.07 putative U3 snoRNP-associated protein Utp21 K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D SPBC776.08c putative Nrap domain-containing protein K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D SPCC18.12c utp23; putative rRNA processing protein Utp23 K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D SPBC32H8.04c putative rRNA processing protein Fcf1 K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D SPCC1827.01c putative U3 associated protein Utp25 K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D SPAC8F11.04 putative U3 snoRNP-associated Cic1/Utp30 family protein K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D SPAC1093.05 putative ATP-dependent RNA helicase Hca4 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D SPAC1F7.02c has1; putative ATP-dependent RNA helicase Has1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D SPAC823.08c putative ATP-dependent RNA helicase Rrp3 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D SPBC543.06c dbp8; putative ATP-dependent RNA helicase Dbp8 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D SPAC22F3.08c rok1; putative ATP-dependent RNA helicase Rok1 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D SPBC16H5.10c prp43; putative ATP-dependent RNA helicase Prp43 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D SPAPB1A10.06c putative ATP-dependent RNA helicase Dhr1 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D SPAC2G11.11c prh1; putative ATP-dependent RNA helicase Prh1 K14781 DHR2; ATP-dependent RNA helicase DHR2 [EC:5.6.2.6] D SPAC1F5.10 putative ATP-dependent RNA helicase K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D SPBC31E1.06 bms1; putative GTP-binding protein Bms1 K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D SPBC119.11c pac1; double-strand-specific ribonuclease Pac1 K03685 rnc; ribonuclease III [EC:3.1.26.3] D SPBC1604.09c putative exoribonuclease Rex4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D SPAC17A5.02c dbr1; RNA lariat debranching enzyme Dbr1 K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D SPAC23C11.11 cka1; serine/threonine protein kinase Cka1 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D SPAC1851.03 ckb1; CK2 family regulatory subunit Ckb1 K03115 CSNK2B; casein kinase II subunit beta D SPBC2G5.02c putative CK2 family regulatory subunit protein K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D SPAC664.08c putative traub family ribosome biogenesis protein K14782 AATF; protein AATF/BFR2 D SPBC23G7.07c putative U3-containing 90S preribosome complex subunit K14784 CMS1; protein CMS1 D SPAC18G6.07c mra1; ribosome biogenesis protein Mra1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D SPBC28E12.05 esf2; putative U3 snoRNP-associated protein Esf2 K14785 ESF2; ESF2/ABP1 family protein D SPAC22G7.05 putative krr family protein K14786 KRI1; protein KRI1 D SPBC25B2.05 mis3; rRNA-processing protein Mis3 K06961 KRR1; ribosomal RNA assembly protein D SPBP22H7.02c putative RNA-binding protein Mrd1 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D SPAC20G8.09c putative ribosome biogenesis ATPase K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D SPAC140.02 gar2; rRNA-processing protein gar2 K11294 NCL; nucleolin D SPCC330.09 putative rRNA processing protein Enp2 K14788 NOL10; ribosome biogenesis protein ENP2 D SPBC365.04c putative RNA-binding and ribosome biogenesis protein K14789 NOP6; nucleolar protein 6 D SPAC6G9.02c nop9; putative RNA-binding protein Nop9 K14790 NOP9; nucleolar protein 9 D SPAC890.05 putative PINX1 family ribosome biogenesis protein K11135 PINX1; Pin2-interacting protein X1 D SPBC1711.16 putative WD repeat protein K14791 PWP1; periodic tryptophan protein 1 D SPAC12G12.06c putative rRNA processing protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D SPCC1183.07 putative U3 snoRNP-associated protein Rrp5 K14792 RRP5; rRNA biogenesis protein RRP5 D SPAC2E1P5.05 putative U3 snoRNP-associated protein Rrp9 K14793 RRP9; ribosomal RNA-processing protein 9 D SPAPB8E5.07c putative ribosome biogenesis protein Rrp12 K14794 RRP12; ribosomal RNA-processing protein 12 D SPAC823.04 uncharacterized protein K14795 RRP36; ribosomal RNA-processing protein 36 D SPAC1952.02 putative ribosome biogenesis protein K14796 TMA23; nucleolar protein TMA23 D SPBC1A4.07c putative U3 snoRNP-associated protein Sof1 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D SPBC3H7.15 hhp1; serine/threonine protein kinase Hhp1 K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1] D SPAC23C4.12 hhp2; serine/threonine protein kinase Hhp2 K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1] D SPAC10F6.10 putative RIO family protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D SPBC1703.05 putative RIO family protein kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D SPBC336.02 putative SSU rRNA dimethylase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D SPAC26A3.06 S-adenosylmethionine-dependent methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D SPBC13G1.09 putative bystin family U3 and U14 snoRNA associated protein K14797 ENP1; essential nuclear protein 1 D SPAC3F10.17 putative ribosome biogenesis protein Ltv1 K14798 LTV1; protein LTV1 D SPAC1486.09 putative ribosome biogenesis protein Nob1 K11883 NOB1; RNA-binding protein NOB1 D SPAC2C4.11c rbp28; RNA-binding protein Rbp28 K11884 PNO1; RNA-binding protein PNO1 D SPBC1289.03c spi1; Ran GTPase Spi1 K07936 RAN; GTP-binding nuclear protein Ran D SPCC830.11c putative nucleoside-triphosphatase K18532 AK6; adenylate kinase [EC:2.7.4.3] D SPAC23H4.15 putative ribosome biogenesis protein Tsr1 K14799 TSR1; pre-rRNA-processing protein TSR1 D SPBC409.15 putative rRNA processing protein Tsr2 K14800 TSR2; pre-rRNA-processing protein TSR2 D SPAC1F3.04c tsr3; putative SSU-rRNA maturation protein Tsr3 K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D SPBC25H2.15 20S rRNA accumulation protein 4 K14801 TSR4; pre-rRNA-processing protein TSR4 D SPAC1805.17 crm1; importin family nuclear export receptor Crm1 K14290 XPO1; exportin-1 D SPAC1B1.03c kap95; karyopherin Kap95 K14293 KPNB1; importin subunit beta-1 D SPAC2F3.06c kap104; karyopherin Kap104 K18752 TNPO1; transportin-1 D SPBC14F5.03c kap123; karyopherin Kap123 K20221 IPO4; importin-4 D SPCC1840.03 sal3; karyopherin Sal3 K20222 IPO5; importin-5 D SPCC550.11 putative karyopherin K20223 IPO7; importin-7 D SPAC22H10.03c kap114; karyopherin Kap14 K20224 IPO9; importin-9 C Other pre-40S particles D SPBC887.12 putative P-type ATPase K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D SPAC3A12.13c translation initiation factor eIF3j (p35) K03245 EIF3J; translation initiation factor 3 subunit J D SPCC1223.11 ptc2; protein phosphatase 2C Ptc2 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D SPAC2G11.07c ptc3; protein phosphatase 2C K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D SPBC14F5.06 rli1; putative Fe-sulfur ATPase Rli1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D SPBP8B7.16c dbp2; ATP-dependent RNA helicase Dbp2 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D SPAC1F7.02c has1; putative ATP-dependent RNA helicase Has1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D SPBC4F6.07c putative ATP-dependent RNA helicase Mak5 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D SPAC30D11.03 ddx27; putative ATP-dependent RNA helicase Ddx27/Drs1 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D SPBC21H7.04 dbp7; putative ATP-dependent RNA helicase Dbp7 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D SPCC285.03 putative ATP-dependent RNA helicase Dbp6 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D SPAC31A2.07c dbp10; putative ATP-dependent RNA helicase Dbp10 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D SPBC24C6.02 putative ATP-dependent RNA helicase Spb4 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D SPCC1494.06c putative ATP-dependent RNA helicase Dbp9 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D SPBC17D1.06 dbp3; putative ATP-dependent RNA helicase Dbp3 K14811 DBP3; ATP-dependent RNA helicase DBP3 [EC:5.6.2.7] D SPAC6F12.16c mtr4; TRAMP complex ATP-dependent RNA helicase subunit Mtr4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D SPAC17H9.02 putative TRAMP complex ATP-dependent RNA helicase K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D SPBC26H8.08c grn1; GTPase Grn1 K14538 NUG1; nuclear GTP-binding protein D SPAC6F6.03c putative ribosome export GTPase K14537 NUG2; nuclear GTP-binding protein D SPBC651.01c nog1; putative GTP-binding protein Nog1 K06943 NOG1; nucleolar GTP-binding protein D SPAC3F10.16c putative HSR1-like GTP-binding protein K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D SPCC553.08c putative GTPase Ria1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D SPBC9B6.11c putative CCR4/nocturin family endoribonuclease K14812 NGL2; RNA exonuclease NGL2 [EC:3.1.-.-] D SPBC1347.07 rex2; putative RNA exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D SPAC637.09 putative ribonuclease H70 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D SPAC1782.08c rex3; putative exonuclease Rex3 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D SPAC17A5.14 exo2; exonuclease II Exo2 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D SPAC26A3.12c dhp1; 5'-3' exoribonuclease Dhp1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D RNase MRP E SPAC25B8.16 putative Rnase P/MRP subunit K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E SPCC16C4.05 putative Rnase P/MRP subunit K14522 POP3; ribonuclease P/MRP protein subunit POP3 [EC:3.1.26.5] E SPBC1703.01c putative Rnase P/MRP subunit K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E SPCC830.09c putative Rnase P/MRP subunit K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E SPBC1709.20 pop8; putative RNase P and RNase MRP subunit Pop8 K14528 POP8; ribonuclease P/MRP protein subunit POP8 [EC:3.1.26.5] E SPAC3A12.04c putative RNase P and RNase MRP subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] E SPBP8B7.01c pop7; putative Rnase P/MRP subunit Pop7 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5] E SPAC6C3.09 putative Rnase P subunit K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] E SPAC323.08 putative ribonuclease MRP complex subunit K14532 RMP1; ribonuclease MRP protein subunit RMP1 C Kinases D SPBC3H7.15 hhp1; serine/threonine protein kinase Hhp1 K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1] D SPAC23C4.12 hhp2; serine/threonine protein kinase Hhp2 K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1] D SPCC830.03 putative polynucleotide kinase Grc3 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D SPBC16H5.08c ATP-binding cassette sub-family F protein K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D SPCC825.01 ATP-binding cassette protein K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D SPBC23E6.05 arx1; putative ribosomal export complex protein Arx1 K14813 ARX1; metalloprotease ARX1 [EC:3.-.-.-] D SPAC6B12.08 mug185; putative ATPase co-chaperone protein K09506 DNAJA5; DnaJ homolog subfamily A member 5 D SPCC1919.09 tif6; translation initiation factor eIF6 K03264 EIF6; translation initiation factor 6 D SPAC13G7.02c ssa1; putative heat shock protein Ssa1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D SPCC1739.13 ssa2; putative heat shock protein Ssa2 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D SPBC1709.05 sks2; ribosome-associated molecular chaperone Sks2 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D SPBC11G11.03 mrt4; putative mRNA turnover and ribosome assembly protein Mrt4 K14815 MRT4; mRNA turnover protein 4 D SPAC16C9.03 nmd3; putative export adaptor Nmd3 K07562 NMD3; 60S ribosomal export protein NMD3 D SPBC1921.03c mex67; nucleoporin Mex67 K14284 NXF; nuclear RNA export factor D SPAPB1A10.03 nxt1; mRNA export receptor Nxt1 K14285 NXT1_2; NTF2-related export protein 1/2 D SPBC1289.03c spi1; Ran GTPase Spi1 K07936 RAN; GTP-binding nuclear protein Ran D SPCC550.15c putative ribosome biogenesis protein K14816 REI1; pre-60S factor REI1 D SPAC4F8.03 sdo1; putative SBDS family ribosome maturation protein Sdo1 K14574 SDO1; ribosome maturation protein SDO1 D SPBC56F2.07c putative ribosome biogenesis factor recycling AAA family ATPase K14575 AFG2; AAA family ATPase D SPAC25H1.08c putative ribosome biogenesis protein Sqt1 K14818 SQT1; ribosome assembly protein SQT1 D SPAC1805.17 crm1; importin family nuclear export receptor Crm1 K14290 XPO1; exportin-1 D SPAC1B1.03c kap95; karyopherin Kap95 K14293 KPNB1; importin subunit beta-1 D SPAC2F3.06c kap104; karyopherin Kap104 K18752 TNPO1; transportin-1 D SPBC14F5.03c kap123; karyopherin Kap123 K20221 IPO4; importin-4 D SPCC1840.03 sal3; karyopherin Sal3 K20222 IPO5; importin-5 D SPCC550.11 putative karyopherin K20223 IPO7; importin-7 D SPAC22H10.03c kap114; karyopherin Kap14 K20224 IPO9; importin-9 D SPBC17A3.06 putative phosphoprotein phosphatase K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D SPCC1393.06c putative rRNA processing protein Ipi1 K14827 IPI1; pre-rRNA-processing protein IPI1 D SPAC13G7.08c crb3; WD repeat protein Crb3 K14829 IPI3; pre-rRNA-processing protein IPI3 D SPBC16C6.12c Las1-like protein K16912 LAS1; ribosomal biogenesis protein LAS1 C Ribosome quality control proteins D SPBC21D10.09c putative ubiquitin-protein ligase E3 K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D SPAC1142.01 uncharacterized protein K24970 TCF25; transcription factor 25 D SPCC132.01c nuclear export mediator factor NEMF K24971 NEMF; nuclear export mediator factor NEMF D SPAC1565.08 cdc48; AAA family ATPase Cdc48 K13525 VCP; transitional endoplasmic reticulum ATPase D SPBC1711.10c npl4; putative Cdc48-Npl4-Ufd1 complex subunit Npl4 K14015 NPLOC4; nuclear protein localization protein 4 D SPBC16A3.09c ufd1; putative Cdc48-Npl4-Ufd1 complex subunit Npl4 K14016 UFD1; ubiquitin fusion degradation protein 1 D SPCC1827.04 ankyrin-repeat protein K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D SPBC800.06 brx1; ribosome biogenesis protein brx1 K14820 BRX1; ribosome biogenesis protein BRX1 D SPAC19B12.11c zinc finger protein K14821 BUD20; bud site selection protein 20 D SPAC1556.05c cgr1; putative CGR1 family ribosome biogenesis protein K14822 CGR1; rRNA-processing protein CGR1 D SPAC17H9.05 ebp2; putative rRNA processing protein Ebp2 K14823 EBP2; rRNA-processing protein EBP2 D SPBC4F6.13c putative WD repeat/BOP1NT protein K14824 ERB1; ribosome biogenesis protein ERB1 D SPAC27F1.06c putative FKBP-type peptidyl-prolyl cis-trans isomerase K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D SPBC1347.02 fkbp39; putative FKBP-type peptidyl-prolyl cis-trans isomerase K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D SPCC16C4.08c skb15; p21-activated protein kinase inhibitor Skb15 K14830 MAK11; protein MAK11 D SPAC222.06 mak16; putative nuclear HMG-like acidic protein Mak16 K14831 MAK16; protein MAK16 D SPAC4F10.09c putative ribosome biogenesis protein Noc1 K14832 MAK21; ribosome biogenesis protein MAK21 D SPCC737.08 putative midasin K14572 MDN1; midasin D SPCC320.11c putative RNA-binding and ribosome biogenesis protein K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D SPAC1142.04 putative Noc complex Noc2 family subunit K14833 NOC2; nucleolar complex protein 2 D SPBC887.03c noc3; putative Noc2p-Noc3p complex subunit Noc3 K14834 NOC3; nucleolar complex protein 3 D SPBP8B7.20c putative RNA methyltransferase Nop2 K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D SPBC4F6.14 putative RNA-binding protein K14573 NOP4; nucleolar protein 4 D SPBP16F5.06 putative ribosome biogenesis protein Nop6 K14836 NOP8; nucleolar protein 8 D SPAC16E8.06c nop12; putative RNA-binding protein Nop12 K14837 NOP12; nucleolar protein 12 D SPCC1827.05c putative RNA-binding protein NIFK K14838 NOP15; nucleolar protein 15 D SPBC1539.10 nop16; putative ribosome biogenesis protein Nop16 K14839 NOP16; nucleolar protein 16 D SPAC22F8.09 rrp16; putative rRNA processing protein Rrp16 K14840 NOP53; nucleolar protein 53 D SPBC83.15 putative ribosome biogenesis protein Nsa1 K14841 NSA1; ribosome biogenesis protein NSA1 D SPCP1E11.08 ribosome biogenesis protein nsa2 K14842 NSA2; ribosome biogenesis protein NSA2 D SPBC19F5.05c ppp1; putative BRCT domain-containing ribosome biogenesis protein K14843 PES1; pescadillo D SPCP1E11.11 puf6; putative Puf family RNA-binding protein Puf6 K14844 PUF6; pumilio homology domain family member 6 D SPBC1711.16 putative WD repeat protein K14791 PWP1; periodic tryptophan protein 1 D SPAC19D5.06c din1; Dhp1p-interacting protein Din1 K14845 RAI1; RAT1-interacting protein D SPCC4G3.18 putative ribosome biogenesis protein Rix1 K14828 RIX1; pre-rRNA-processing protein RIX1 D SPBC16E9.10c putative AAA family ATPase Rix7 K14571 RIX7; ribosome biogenesis ATPase D SPAC4F8.04 putative Brix domain-containing protein Rpf1 K14846 RPF1; ribosome production factor 1 D SPAC926.08c putative Brix domain-containing protein Rpf2 K14847 RPF2; ribosome production factor 2 D SPBC1711.07 putative WD repeat-containing protein Rrb1 K14848 RRB1; ribosome assembly protein RRB1 D SPBC9B6.07 nop52; putative Nop52 family nucleolar protein K14849 RRP1; ribosomal RNA-processing protein 1 D SPAC56F8.09 rrp8; putative rRNA methyltransferase Rrp8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D SPAPB8E5.07c putative ribosome biogenesis protein Rrp12 K14794 RRP12; ribosomal RNA-processing protein 12 D SPAC29A4.09 putative rRNA exonuclease Rrp17 K14851 RRP17; ribosomal RNA-processing protein 17 D SPBC29A3.16 rrs1; putative ribosome biogenesis protein Rrs1 K14852 RRS1; regulator of ribosome biosynthesis D SPCC18.05c uncharacterized protein K14855 RSA4; ribosome assembly protein 4 D SPBC106.14c sda1; putative SDA1 family protein K14856 SDA1; protein SDA1 D SPAC1687.11 spb1; putative rRNA methyltransferase Spb1 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D SPAC1B9.03c putative ribosome biogenesis protein K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D SPCC14G10.02 putative ribosome biogenesis protein Urb1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D SPAC2G11.02 urb2; putative ribosome biogenesis protein Urb2 K14862 URB2; nucleolar pre-ribosomal-associated protein 2 D SPAC890.04c putative ribosome biogenesis protein Ytm1 K14863 WDR12; ribosome biogenesis protein D SPAC4F10.19c putative HIT zinc finger domain-containing protein K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C SPCC613.08 putative cyclin-dependent kinase regulator K15262 BCP1; protein BCP1 C SPBC215.06c LYHRT family protein K15263 LYER; cell growth-regulating nucleolar protein C SPAC2C4.06c putative rRNA methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C SPBC1347.13c putative ribose methyltransferase K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C SPBC2G2.15c mrm2; putative 2' O-ribose methyltransferase Mrm2 K15508 MRM2; 21S rRNA (uridine2791-2'-O)-methyltransferase [EC:2.1.1.168] C SPAC630.10 uncharacterized protein K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] C SPAC23H4.09 cdb4; peptidase family curved DNA-binding protein Cdb4 K26736 PA2G4; ERBB-3 binding protein C SPBC25B2.04c mtg1; putative GTPase Mtg1 K19828 MTG1; mitochondrial GTPase 1 C SPAC1002.08c mtf1; RNA polymerase-specificity factor Mtf1 K15267 MTEF1; mitochondrial transcription factor 1 C SPAC1071.05 putative S-adenosylmethionine-dependent methyltransferase K18803 HPM1; protein-histidine N-methyltransferase [EC:2.1.1.85] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D SPBC646.10c putative U3 snoRNP protein Nop56 K14564 NOP56; nucleolar protein 56 D SPBC29A3.04 rpl8; 60S ribosomal protein L8 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D SPAC29A4.04c cbf5; putative pseudouridylate synthase Cbf5 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D SPAP27G11.13c nop10; putative snoRNP complex protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors D SPAPB17E12.10c putative 2' O-ribose methyltransferase Mrm2-like protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors B rRNA processing factors C SPBC119.11c pac1; double-strand-specific ribonuclease Pac1 K03685 rnc; ribonuclease III [EC:3.1.26.3] B rRNA helicases B GTPases B Other maturation factors C SPCC895.03c putative SUA5/yciO/yrdC family protein Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C SPACUNK4.13c putative NTPase Ylf2 K06942 ychF; ribosome-binding ATPase C SPBC428.15 putative Obg-like ATPase K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024