+F Repair protein KO
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DNA Repair and Recombination Proteins - Schizosaccharomyces pombe (fission yeast)
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
C BER (base exicision repair)
D DNA glycosylases
E SPCC1183.06 ung1; uracil DNA N-glycosylase Ung1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E SPCC965.05c thp1; uracil DNA N-glycosylase Thp1 K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E SPAC26A3.02 myh1; adenine DNA glycosylase Myh1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E SPAC30D11.07 nth1; DNA endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E SPBC3D6.10 apn2; AP-endonuclease Apn2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F SPBC336.04 cdc6; DNA polymerase delta catalytic subunit Cdc6 K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F SPAC27E2.05 cdc1; DNA polymerase delta small subunit Cdc1 K02328 POLD2; DNA polymerase delta subunit 2
F SPBC1734.02c cdc27; DNA polymerase delta subunit Cdc27 K03504 POLD3; DNA polymerase delta subunit 3
F SPBC12D12.02c cdm1; DNA polymerase delta subunit Cdm1 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F SPBC25H2.13c cdc20; DNA polymerase epsilon catalytic subunit Pol2 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F SPBP8B7.14c dpb2; DNA polymerase epsilon catalytic subunit B Dpb2 K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F SPBC3D6.09 dpb4; DNA polymerase epsilon subunit Dpb4 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E SPBC16D10.09 pcn1; DNA polymerase delta processivity factor K04802 PCNA; proliferating cell nuclear antigen
E SPAC3G6.06c rad2; FEN-1 endonuclease Rad2 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E SPAC20G8.01 cdc17; ATP-dependent DNA ligase Cdc17 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E SPCP31B10.05 tdp1; tyrosyl-DNA phosphodiesterase Tdp1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E SPCC18.09c aprataxin-like protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E SPAC23C11.04c pnk1; DNA kinase/phosphatase Pnk1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F SPCC4G3.10c rhp42; DNA repair protein Rhp42 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F SPAC12B10.12c rhp41; DNA repair protein Rhp41 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F SPBC2D10.12 rhp23; UV excision repair protein rhp23 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F SPAC23H4.18c rbx1; RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F SPAC3A11.08 pcu4; cullin 4 K10609 CUL4; cullin 4
F SPAC17H9.10c ddb1; damaged DNA-binding protein Ddb1 K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F SPCC330.02 rhp7; DNA repair protein K15082 RAD7; DNA repair protein RAD7
F SPCC330.01c rhp16; ATP-dependent helicase K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F SPBC28F2.12 rpb1; RNA polymerase II large subunit Rpb1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F SPAC23G3.01 rpb2; RNA polymerase II complex subunit Rpb2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F SPCC1442.10c rpb3; RNA polymerase II subunit 3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F SPBC337.14 rpb4; DNA-directed RNA polymerase II complex subunit Rpb4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F SPAC23C4.15 rpb5; DNA-directed RNA polymerase subunit Rpb5 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F SPCC1020.04c rpb6; DNA-directed RNA polymerase subunit Rpb6 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F SPACUNK4.06c rpb7; DNA-directed RNA polymerase complex II subunit Rpb7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F SPBC14C8.12 rpb8; DNA-directed RNA polymerase subunit Rpb8 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F SPAPYUG7.04c rpb9; DNA-directed RNA polymerase II complex subunit Rpb9 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F SPAC1B3.12c rpb10; DNA-directed RNA polymerase subunit Rpb10 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F SPAC3A12.07 rpb11; RNA polymerase II complex subunit Rpb11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F SPBC19C2.03 rpc10; DNA-directed RNA polymerase subunit Rpc10 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F SPAC23H4.18c rbx1; RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F SPAC3A11.08 pcu4; cullin 4 K10609 CUL4; cullin 4
F SPAC17H9.10c ddb1; damaged DNA-binding protein Ddb1 K10610 DDB1; DNA damage-binding protein 1
F SPBC577.09 ckn1; DNA repair ERCC8 family protein ckn1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F SPCP25A2.02c rhp26; SNF2 family helicase Rhp26 K10841 ERCC6; DNA excision repair protein ERCC-6
F SPAC1B3.02c putative Elf1 family transcription elongation factor K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E SPAC17A5.06 ptr8; transcription factor TFIIH complex ERCC-3 subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E SPAC1D4.12 rad15; transcription factor TFIIH complex subunit Rad15 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E SPAC16E8.11c tfb1; putative transcription factor TFIIH complex subunit Tfb1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E SPCC1682.07 ssl1; transcription factor TFIIH complex subunit Ssl1 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E SPBC30B4.07c tfb4; transcription factor TFIIH complex subunit Tfb4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E SPBC13G1.13 tfb2; transcription factor TFIIH complex subunit Tfb2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E SPBC32F12.15 tfb5; putative transcription factor TFIIH complex subunit Tfb5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E SPBC19F8.07 mcs6; cyclin-dependent protein kinase/CDK-activating kinase Mcs6 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E SPBP16F5.02 mcs2; TFIIH complex cyclin Mcs2 K06634 CCNH; cyclin H
E SPBC776.18c pmh1; transcription factor TFIIH complex subunit Pmh1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E SPBC660.13c ssb1; DNA replication factor A subunit Ssb1 K07466 RFA1; replication factor A1
E SPCC1753.01c ssb2; single-stranded DNA-binding protein Ssb2 K10739 RFA2; replication factor A2
E SPCC23B6.05c ssb3; DNA replication factor A subunit Ssb3 K10740 RPA3; replication factor A3
D Other NER factors
E SPBC649.03 rhp14; DNA repair protein K10847 XPA; DNA-repair protein complementing XP-A cells
E SPBC4F6.15c swi10; DNA repair endonuclease Swi10 K10849 ERCC1; DNA excision repair protein ERCC-1
E SPCC970.01 rad16; DNA repair endonuclease XPF K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E SPBC3E7.08c rad13; DNA repair nuclease Rad13 K10846 ERCC5; DNA excision repair protein ERCC-5
E SPAC20G8.01 cdc17; ATP-dependent DNA ligase Cdc17 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E SPAC1071.02 mms19; TFIIH regulator Mms19 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E SPAC24H6.03 cul3; cullin 3 K03869 CUL3; cullin 3
E SPBC1861.07 putative elongin C K03872 ELOC; elongin-C
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E SPBC19G7.01c msh2; DNA mismatch repair protein K08735 MSH2; DNA mismatch repair protein MSH2
E SPAC8F11.03 msh3; DNA mismatch repair protein K08736 MSH3; DNA mismatch repair protein MSH3
E SPCC285.16c msh6; DNA mismatch repair protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E SPBC1703.04 mlh1; putative MutL family protein Mlh1 K08734 MLH1; DNA mismatch repair protein MLH1
E SPAC19G12.02c pms1; MutL family mismatch-repair protein Pms1 K10858 PMS2; DNA mismatch repair protein PMS2
D DNA polymerase delta complex
E SPBC336.04 cdc6; DNA polymerase delta catalytic subunit Cdc6 K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E SPAC27E2.05 cdc1; DNA polymerase delta small subunit Cdc1 K02328 POLD2; DNA polymerase delta subunit 2
E SPBC1734.02c cdc27; DNA polymerase delta subunit Cdc27 K03504 POLD3; DNA polymerase delta subunit 3
E SPBC12D12.02c cdm1; DNA polymerase delta subunit Cdm1 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E SPBC660.13c ssb1; DNA replication factor A subunit Ssb1 K07466 RFA1; replication factor A1
E SPCC1753.01c ssb2; single-stranded DNA-binding protein Ssb2 K10739 RFA2; replication factor A2
E SPCC23B6.05c ssb3; DNA replication factor A subunit Ssb3 K10740 RPA3; replication factor A3
D RFC (replication factor C)
E SPBC23E6.07c rfc1; DNA replication factor C complex subunit Rfc1 K10754 RFC1; replication factor C subunit 1
E SPAC23D3.02 rfc2; DNA replication factor C complex subunit Rfc2 K10755 RFC2_4; replication factor C subunit 2/4
E SPAC1687.03c rfc4; putative DNA replication factor C complex subunit Rfc4 K10755 RFC2_4; replication factor C subunit 2/4
E SPAC27E2.10c rfc3; DNA replication factor C complex subunit Rfc3 K10756 RFC3_5; replication factor C subunit 3/5
E SPBC83.14c rfc5; putative DNA replication factor C complex subunit Rfc5 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E SPBC16D10.09 pcn1; DNA polymerase delta processivity factor K04802 PCNA; proliferating cell nuclear antigen
E SPBC29A10.05 exo1; exonuclease I Exo1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E SPAC20G8.01 cdc17; ATP-dependent DNA ligase Cdc17 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E SPAC13C5.07 rad32; Rad32 nuclease K10865 MRE11; double-strand break repair protein MRE11
E SPAC1556.01c rad50; DNA repair protein Rad50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E SPAC13C5.07 rad32; Rad32 nuclease K10865 MRE11; double-strand break repair protein MRE11
E SPAC1556.01c rad50; DNA repair protein Rad50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E SPAC644.14c rhp51; RecA family recombinase Rhp51 K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E SPAC644.14c rhp51; RecA family recombinase Rhp51 K04482 RAD51; DNA repair protein RAD51
E SPAC20H4.07 rhp57; RecA family ATPase Rhp57 K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E SPBC119.14 rti1; DNA repair and recombination protein K10873 RAD52; DNA repair and recombination protein RAD52
E SPAC30D11.10 rad22; DNA recombination protein Rad22 K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
E SPAC15A10.03c rhp54; DNA repair protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E SPAC22F3.03c rdh54; ATP-dependent DNA helicase Rdh54 K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E SPAC2G11.12 rqh1; RecQ type DNA helicase Rqh1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E SPAC2G11.12 rqh1; RecQ type DNA helicase Rqh1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E SPBC16G5.12c top3; DNA topoisomerase III K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E SPAC26A3.03c rmi1; putative RecQ mediated genome instability protein Rmi1 K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E SPBC660.13c ssb1; DNA replication factor A subunit Ssb1 K07466 RFA1; replication factor A1
E SPCC1753.01c ssb2; single-stranded DNA-binding protein Ssb2 K10739 RFA2; replication factor A2
E SPCC23B6.05c ssb3; DNA replication factor A subunit Ssb3 K10740 RPA3; replication factor A3
D Protein phosphatase 4
E SPBC26H8.05c putative serine/threonine protein phosphatase K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E SPBC216.01c putative DNA damage response protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E SPAC14C4.02c smc5; Smc5-6 complex SMC subunit Smc5 K22803 SMC5; structural maintenance of chromosomes protein 5
E SPCC5E4.06 smc6; Smc5-6 complex SMC subunit Smc6 K22804 SMC6; structural maintenance of chromosomes protein 6
E SPCC550.05 nse1; Smc5-6 complex non-SMC subunit 1 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E SPAC16A10.06c nse2; Smc5-6 complex non-SMC subunit 2 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E SPBC20F10.04c nse4; non-structural maintenance of chromosome element 4 K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E SPAPB1E7.06c eme1; Holliday junction resolvase subunit Eme1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E SPCC4G3.05c mus81; Holliday junction resolvase subunit Mus81 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E SPAC3G6.02 dss1; mRNA export protein Dss1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E SPBC409.03 swi5; protein Swi5 K10991 SWI5; DNA repair protein Swi5/Sae3
E SPBC28F2.07 sfr1; Swi five-dependent recombination repair protein Sfr1 K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
E SPAP27G11.15 slx1; structure-specific endonuclease catalytic subunit K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E SPAC23H4.12 alp13; MRG family Clr6 histone deacetylase complex subunit Alp13 K11339 MORF4L1; mortality factor 4-like protein 1
E SPBC947.01 AAA family ATPase K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E SPAC328.04 AAA domain-containing protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E SPAC9.05 fml1; ATP-dependent 3' to 5' DNA helicase K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E SPCC126.02c pku70; Ku domain protein Pku70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E SPBC543.03c pku80; Ku domain protein Pku80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E SPAC13C5.07 rad32; Rad32 nuclease K10865 MRE11; double-strand break repair protein MRE11
E SPAC1556.01c rad50; DNA repair protein Rad50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E SPCC1183.05c lig4; DNA ligase Lig4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E SPAC2F7.06c pol4; DNA polymerase X family K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
D Other NHEJ factors
E SPCC18.09c aprataxin-like protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
D Bloom's syndrome complex (BTR)
E SPAC2G11.12 rqh1; RecQ type DNA helicase Rqh1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E SPBC16G5.12c top3; DNA topoisomerase III K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E SPAC26A3.03c rmi1; putative RecQ mediated genome instability protein Rmi1 K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E SPBC146.06c fanconi-associated nuclease 1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E SPAC644.14c rhp51; RecA family recombinase Rhp51 K04482 RAD51; DNA repair protein RAD51
E SPAC458.03 tel2; Tel2/Rad-5/Clk-2 family protein Tel2 K11137 TELO2; telomere length regulation protein
E SPAC31A2.14 bun107; WD repeat-containing protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E SPCC663.01c ekc1; putative protein phosphatase regulatory subunit Ekc1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E SPCC1020.09 gnr1; heterotrimeric G protein beta subunit Gnr1 K23314 WRAP53; telomerase Cajal body protein 1
E SPAC343.17c WD repeat-containing protein K24752 WDR70; WD repeat-containing protein 70
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D SPBC16A3.11 eso1; sister chromatid cohesion protein/DNA polymerase eta Eso1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D SPCC553.07c kpa1; DinB-like DNA repair polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D SPBC1347.01c rev1; putative deoxycytidyl transferase Rev1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D SPAC688.10 rev3; putative DNA polymerase zeta catalytic subunit Rev3 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D SPAC18B11.07c rhp6; ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D SPBC1734.06 rhp18; postreplication repair E3 ubiquitin-protein ligase K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D SPAC13G6.01c rad8; ubiquitin-protein ligase E3 Rad8 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D SPCC338.05c mms2; ubiquitin-conjugating enzyme Mms2 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D SPAC11E3.04c ubc13; ubiquitin-conjugating enzyme Ubc13 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D SPBC16D10.09 pcn1; DNA polymerase delta processivity factor K04802 PCNA; proliferating cell nuclear antigen
D SPBC19G7.04 HMG box protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D SPAC664.07c rad9; checkpoint clamp complex protein Rad9 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D SPAC20G4.04c hus1; checkpoint clamp complex protein Hus1 K10903 HUS1; HUS1 checkpoint protein
D SPAC1952.07 rad1; checkpoint clamp complex protein Rad1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D SPAC14C4.13 rad17; RFC-like checkpoint protein Rad17 K06662 HRAD17; cell cycle checkpoint protein
D SPAC23D3.02 rfc2; DNA replication factor C complex subunit Rfc2 K10755 RFC2_4; replication factor C subunit 2/4
D SPAC1687.03c rfc4; putative DNA replication factor C complex subunit Rfc4 K10755 RFC2_4; replication factor C subunit 2/4
D SPAC27E2.10c rfc3; DNA replication factor C complex subunit Rfc3 K10756 RFC3_5; replication factor C subunit 3/5
D SPBC83.14c rfc5; putative DNA replication factor C complex subunit Rfc5 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D SPAC1952.07 rad1; checkpoint clamp complex protein Rad1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D SPBC216.06c swi1; replication fork protection complex subunit Swi1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D SPBC30D10.04 swi3; replication fork protection complex subunit Swi3 K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D SPAC694.06c mrc1; protein mrc1 K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D SPAC458.03 tel2; Tel2/Rad-5/Clk-2 family protein Tel2 K11137 TELO2; telomere length regulation protein
D SPCC622.13c tti1; Tel Two Interacting protein 1 K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D SPCC1672.12c get4; putative protein Get4 K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D SPBC216.05 rad3; ATR checkpoint kinase Rad3 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D SPCC23B6.03c tel1; ATM checkpoint kinase K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D SPCC1259.13 chk1; protein kinase Chk1 K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D SPAC24H6.05 cdc25; M phase inducer phosphatase Cdc25 K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D SPAC8E11.02c rad24; 14-3-3 protein Rad24 K06630 YWHAE; 14-3-3 protein epsilon
D SPAC17A2.13c rad25; 14-3-3 protein Rad25 K06630 YWHAE; 14-3-3 protein epsilon
D SPCC18B5.11c cds1; replication checkpoint kinase cds1 K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-]
D SPCC18B5.03 wee1; protein kinase Wee1 K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D SPBC16G5.15c fkh2; fork head transcription factor Fkh2 K24664 FKH; forkhead protein FKH
D SPAC2G11.06 vps4; putative AAA family ATPase Vps4 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D SPAC31G5.18c sde2; silencing defective protein sde2 K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D SPBC14C8.14c pol5; DNA polymerase phi K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D SPAC22A12.01c pso2; putative DNA 5' exonuclease K15340 DCLRE1A; DNA cross-link repair 1A protein
D SPBC685.02 exo5; putative single-strand DNA-specific 5'-3' exodeoxyribonuclease Exo5 K17815 EXO5; exonuclease V [EC:3.1.-.-]
D SPAC1F12.06c putative DNA repair endonuclease K21813 ENDOV; endonuclease V [EC:3.1.26.-]
C Helicases
C PSO4 complex
D SPAC29A4.08c prp19; ubiquitin-protein ligase E4 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D SPAC644.12 cdc5; splicing factor Cdc5 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D SPBC28F2.04c cwf7; splicing factor Cwf7 K12861 BCAS2; pre-mRNA-splicing factor SPF27
D SPBP22H7.07 prp5; WD repeat protein Prp5 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D SPAC644.05c putative deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SPAC1F7.05 cdc22; ribonucleoside reductase large subunit Cdc22 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D SPBC25D12.04 suc22; ribonucleotide reductase small subunit Suc22 K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
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AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
C BER (base exicision repair)
D DNA glycosylases
E SPCC1183.06 ung1; uracil DNA N-glycosylase Ung1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E SPAC26A3.02 myh1; adenine DNA glycosylase Myh1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E SPAC30D11.07 nth1; DNA endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E SPAC4H3.05 srs2; UvrD subfamily ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E SPAC4H3.05 srs2; UvrD subfamily ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D SPAC644.05c putative deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024