+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Sus scrofa (pig)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D 100512568 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 100626002 FBL; rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 100512446 NOP56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 100156132 NOP58; nucleolar protein 58 isoform X1 K14565 NOP58; nucleolar protein 58 D 100155420 SNU13; NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D 100216430 DKC1; H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 100516629 GAR1; H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D 100526157 NHP2; H/ACA ribonucleoprotein complex subunit 2 K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D 100156164 NOP10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D 100518673 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 D 100511045 SHQ1; protein SHQ1 homolog isoform X1 K14764 SHQ1; protein SHQ1 B 90S particles C U3 small nucleolar RNA-associated proteins D 100151831 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D 100621511 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D 100153310 MPHOSPH10; U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 100513213 NGDN; neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D 100625121 RRP7A; ribosomal RNA-processing protein 7 homolog A isoform X1 K14545 RRP7; ribosomal RNA-processing protein 7 D 100623705 PWP2; periodic tryptophan protein 2 homolog isoform X1 K14558 PWP2; periodic tryptophan protein 2 D 106504051 NOP14; nucleolar protein 14 K14766 NOP14; nucleolar protein 14 D 100217385 UTP3; something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D 414432 UTP4; U3 small nucleolar RNA-associated protein 4 homolog K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D 100519832 WDR43; WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 100524172 UTP6; U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D 100154206 WDR46; WD repeat-containing protein 46 isoform X2 K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D 100154560 HEATR1; LOW QUALITY PROTEIN: HEAT repeat-containing protein 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D 100513019 UTP11; probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D 100154556 WDR3; WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D 100623969 TBL3; transducin beta-like protein 3 isoform X1 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D 100523416 UTP14A; U3 small nucleolar RNA-associated protein 14 homolog A isoform X1 K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 100515474 UTP15; U3 small nucleolar RNA-associated protein 15 homolog K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D 100511538 WDR75; WD repeat-containing protein 75 isoform X2 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D 100517967 UTP18; U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D 100156024 NOC4L; nucleolar complex protein 4 homolog K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D 100524087 UTP20; small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 100627271 WDR36; WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D 100511276 NOL6; nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D 100738679 UTP23; rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D 100524688 FCF1; rRNA-processing protein FCF1 homolog isoform X2 K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D 100511829 DIEXF; digestive organ expansion factor homolog K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D 102166714 RSL1D1; ribosomal L1 domain-containing protein 1 K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D 100739082 DDX10; probable ATP-dependent RNA helicase DDX10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D 100153560 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 100621702 DDX47; probable ATP-dependent RNA helicase DDX47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D 100526038 DDX49; probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 100623826 DDX52; probable ATP-dependent RNA helicase DDX52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D 100517041 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 100520983 DHX37; probable ATP-dependent RNA helicase DHX37 isoform X1 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D 100101926 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D 100157879 BMS1; ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D 100524961 DROSHA; LOW QUALITY PROTEIN: ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D 100626933 REXO4; RNA exonuclease 4 isoform X1 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 106505697 DBR1; lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D 100517435 CSNK2A1; casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 100737256 CSNK2A2; casein kinase II subunit alpha' isoform X1 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 397211 CSNK2B; casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D 100513881 AATF; protein AATF isoform X1 K14782 AATF; protein AATF/BFR2 D 100152199 CMSS1; protein CMSS1 isoform X4 K14784 CMS1; protein CMS1 D 100627558 EMG1; ribosomal RNA small subunit methyltransferase NEP1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 100153723 ABT1; activator of basal transcription 1 K14785 ESF2; ESF2/ABP1 family protein D 100525385 KRI1; protein KRI1 homolog isoform X2 K14786 KRI1; protein KRI1 D 100523737 KRR1; KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 100156794 RBM19; probable RNA-binding protein 19 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D 100511365 NAT10; RNA cytidine acetyltransferase K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 100737210 NCL; nucleolin isoform X1 K11294 NCL; nucleolin D 100512777 NOL10; nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2 D 100154880 NOP9; nucleolar protein 9 K14790 NOP9; nucleolar protein 9 D 100154593 PINX1; PIN2/TERF1-interacting telomerase inhibitor 1 isoform X1 K11135 PINX1; Pin2-interacting protein X1 D 100519838 PWP1; LOW QUALITY PROTEIN: periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 100154484 RCL1; RNA 3'-terminal phosphate cyclase-like protein isoform X1 K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D 100157027 PDCD11; protein RRP5 homolog K14792 RRP5; rRNA biogenesis protein RRP5 D 100620746 RRP9; U3 small nucleolar RNA-interacting protein 2 K14793 RRP9; ribosomal RNA-processing protein 9 D 100155987 RRP12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 100141407 RRP36; ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36 D 100516425 TCOF1; treacle protein K14562 TCOF1; Treacher Collins syndrome protein D 100155764 DCAF13; LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D 100157926 RIOK1; serine/threonine-protein kinase RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D 100511553 RIOK2; LOW QUALITY PROTEIN: serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D 100625553 DIMT1; probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 100525688 BUD23; LOW QUALITY PROTEIN: probable 18S rRNA (guanine-N(7))-methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D 100520407 METTL5; methyltransferase-like protein 5 isoform X1 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5 D 100156292 BYSL; bystin K14797 ENP1; essential nuclear protein 1 D 100627735 LTV1; protein LTV1 homolog K14798 LTV1; protein LTV1 D 100516270 NOB1; RNA-binding protein NOB1 isoform X1 K11883 NOB1; RNA-binding protein NOB1 D 100515308 PNO1; RNA-binding protein PNO1 K11884 PNO1; RNA-binding protein PNO1 D 397655 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 106504175 AK6; adenylate kinase isoenzyme 6 isoform X2 K18532 AK6; adenylate kinase [EC:2.7.4.3] D 110256073 TSR1; pre-rRNA-processing protein TSR1 homolog isoform X1 K14799 TSR1; pre-rRNA-processing protein TSR1 D 100157624 TSR2; pre-rRNA-processing protein TSR2 homolog K14800 TSR2; pre-rRNA-processing protein TSR2 D 100515431 TSR3; ribosome biogenesis protein TSR3 homolog isoform X1 K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 100512169 PDCD2L; programmed cell death protein 2-like isoform X2 K14801 TSR4; pre-rRNA-processing protein TSR4 D 100518907 RPS19BP1; active regulator of SIRT1 K26536 RPS19BP1; active regulator of SIRT1 D 397330 XPO1; exportin-1 isoform X3 K14290 XPO1; exportin-1 D 100518449 KPNB1; importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 100627484 TNPO1; transportin-1 isoform X2 K18752 TNPO1; transportin-1 D 100157703 IPO4; importin-4 K20221 IPO4; importin-4 D 100152933 IPO5; importin-5 K20222 IPO5; importin-5 D 100626508 IPO7; importin-7 isoform X1 K20223 IPO7; importin-7 D 102161799 IPO9; importin-9 isoform X1 K20224 IPO9; importin-9 C Other pre-40S particles D 100515393 ATP8A1; LOW QUALITY PROTEIN: phospholipid-transporting ATPase IA K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 100625134 phospholipid-transporting ATPase IB K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 100523747 phospholipid-transporting ATPase IB isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 100517070 EIF3J; eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J D 100524881 ABCE1; ATP-binding cassette sub-family E member 1 isoform X2 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D 102158045 DDX5; probable ATP-dependent RNA helicase DDX5 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 100153560 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 100153111 DDX21; nucleolar RNA helicase 2 K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 100157901 DDX24; LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 100625841 DDX27; probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D 100513393 DDX31; probable ATP-dependent RNA helicase DDX31 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D 100512865 DDX51; ATP-dependent RNA helicase DDX51 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D 100523515 DDX54; ATP-dependent RNA helicase DDX54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D 100157342 DDX55; ATP-dependent RNA helicase DDX55 isoform X1 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 100513388 DDX56; probable ATP-dependent RNA helicase DDX56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D 100518521 SKIV2L2; superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D 100155235 GNL3; guanine nucleotide-binding protein-like 3 isoform X2 K14538 NUG1; nuclear GTP-binding protein D 100521120 GNL3L; guanine nucleotide-binding protein-like 3-like protein K14538 NUG1; nuclear GTP-binding protein D 100623150 GNL2; nucleolar GTP-binding protein 2 isoform X1 K14537 NUG2; nuclear GTP-binding protein D 100625226 GTPBP4; nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein D 100155750 LSG1; LOW QUALITY PROTEIN: large subunit GTPase 1 homolog K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 100155652 EFL1; elongation factor-like GTPase 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D 100522629 REXO2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-] D 100525449 REXO1; RNA exonuclease 1 homolog isoform X3 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 100512042 REXO5; putative RNA exonuclease NEF-sp isoform X1 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 100515927 XRN1; LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D 100517201 XRN2; LOW QUALITY PROTEIN: 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D RNase MRP E 100739449 POP1; ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E 100523065 POP4; ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E 100151786 POP5; ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E 100156540 RPP30; ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] E 100627239 POP7; ribonuclease P protein subunit p20 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5] E 100157338 RPP25; ribonuclease P protein subunit p25 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 100522095 RPP25L; ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 100626611 RPP38; ribonuclease P protein subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5] E 110255215 RPP40; ribonuclease P protein subunit p40 isoform X1 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] C Kinases D 100518312 NOL9; polynucleotide 5'-hydroxyl-kinase NOL9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D 100522910 ABCF2; ATP-binding cassette sub-family F member 2 isoform X1 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D 100513694 DNAJC21; LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 21 K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 100627301 EIF6; eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D 396648 HSP70.2; heat shock 70 kDa protein 1B K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 100144518 HSPA1L; heat shock 70 kDa protein 1-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 396906 HSPA6; heat shock 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 100511890 HSPA8; heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 100621324 HSPA2; LOW QUALITY PROTEIN: heat shock-related 70 kDa protein 2 K26598 HSPA2; heat shock 70kDa protein 2 D 100511136 MRTO4; mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4 D 100738482 NMD3; 60S ribosomal export protein NMD3 isoform X1 K07562 NMD3; 60S ribosomal export protein NMD3 D 100153087 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor D 100628213 NXF1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor D 102164431 nuclear RNA export factor 3-like K14284 NXF; nuclear RNA export factor D 110257687 nuclear RNA export factor 3-like K14284 NXF; nuclear RNA export factor D 100514739 NXT1; NTF2-related export protein 1 K14285 NXT1_2; NTF2-related export protein 1/2 D 100521422 NXT2; NTF2-related export protein 2 isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2 D 397655 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 100521757 ZNF622; zinc finger protein 622 isoform X1 K14816 REI1; pre-60S factor REI1 D 100516003 SBDS; ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1 D 100415805 SPATA5; spermatogenesis-associated protein 5 K14575 AFG2; AAA family ATPase D 100156592 SPATA5L1; spermatogenesis-associated protein 5-like protein 1 K26051 SPATA5L1; ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10] D 100155781 CINP; cyclin-dependent kinase 2-interacting protein isoform X1 K26052 CINP; cyclin-dependent kinase 2-interacting protein D 110261150 C6H1orf109; uncharacterized protein C1orf109 homolog K26053 C1ORF109; ribosome biogenesis protein C1orf109 D 397330 XPO1; exportin-1 isoform X3 K14290 XPO1; exportin-1 D 100518449 KPNB1; importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 100627484 TNPO1; transportin-1 isoform X2 K18752 TNPO1; transportin-1 D 100157703 IPO4; importin-4 K20221 IPO4; importin-4 D 100152933 IPO5; importin-5 K20222 IPO5; importin-5 D 100626508 IPO7; importin-7 isoform X1 K20223 IPO7; importin-7 D 102161799 IPO9; importin-9 isoform X1 K20224 IPO9; importin-9 D 100156895 DUSP12; dual specificity protein phosphatase 12 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D 100157099 TEX10; testis-expressed protein 10 K14827 IPI1; pre-rRNA-processing protein IPI1 D 100622895 WDR18; WD repeat-containing protein 18 isoform X1 K14829 IPI3; pre-rRNA-processing protein IPI3 D 100156298 LAS1L; ribosomal biogenesis protein LAS1L isoform X1 K16912 LAS1; ribosomal biogenesis protein LAS1 D 102157970 PELP1; LOW QUALITY PROTEIN: proline-, glutamic acid- and leucine-rich protein 1 K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1 D 100625547 SENP3; sentrin-specific protease 3 K08593 SENP3; sentrin-specific protease 3 [EC:3.4.22.68] C Ribosome quality control proteins D 106505847 LTN1; E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 100620736 TCF25; transcription factor 25 isoform X1 K24970 TCF25; transcription factor 25 D 100156579 NEMF; nuclear export mediator factor NEMF isoform X1 K24971 NEMF; nuclear export mediator factor NEMF D 397524 VCP; transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D 100625565 NPLOC4; nuclear protein localization protein 4 homolog K14015 NPLOC4; nuclear protein localization protein 4 D 100153062 UFD1; ubiquitin fusion degradation protein 1 homolog isoform X2 K14016 UFD1; ubiquitin fusion degradation protein 1 D 100514763 PTRHD1; putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29] D 100152759 ANKZF1; LOW QUALITY PROTEIN: ankyrin repeat and zinc finger domain-containing protein 1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D 100513502 BRIX1; ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1 D 110261119 ZNF593; zinc finger protein 593 K14821 BUD20; bud site selection protein 20 D 100526154 CCDC86; coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1 D 100520256 EBNA1BP2; probable rRNA-processing protein EBP2 K14823 EBP2; rRNA-processing protein EBP2 D 100515826 BOP1; ribosome biogenesis protein BOP1 K14824 ERB1; ribosome biogenesis protein ERB1 D 100157999 TMED5; transmembrane emp24 domain-containing protein 5 precursor K14825 TMED5; p24 family protein gamma-2 D 100156606 PAK1IP1; LOW QUALITY PROTEIN: p21-activated protein kinase-interacting protein 1 K14830 MAK11; protein MAK11 D 100511048 MAK16; protein MAK16 homolog K14831 MAK16; protein MAK16 D 100522073 CEBPZ; CCAAT/enhancer-binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21 D 100525725 MDN1; LOW QUALITY PROTEIN: midasin K14572 MDN1; midasin D 595107 NIP7; 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 106504103 NOC2L; nucleolar complex protein 2 homolog isoform X1 K14833 NOC2; nucleolar complex protein 2 D 100158153 NOC3L; nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3 D 100516080 NOP2; probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D 100628057 RBM28; RNA-binding protein 28 K14573 NOP4; nucleolar protein 4 D 100623374 NOL8; nucleolar protein 8 K14836 NOP8; nucleolar protein 8 D 100154004 RBM34; RNA-binding protein 34 isoform X1 K14837 NOP12; nucleolar protein 12 D 100124386 NIFK; MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15 D 100624752 NOP53; LOW QUALITY PROTEIN: glioma tumor suppressor candidate region gene 2 protein K14840 NOP53; nucleolar protein 53 D 100627951 WDR74; WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1 D 100517810 NSA2; ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 100154050 PES1; pescadillo homolog K14843 PES1; pescadillo D 100152831 PUM3; pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6 D 100519838 PWP1; LOW QUALITY PROTEIN: periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 100124385 DXO; decapping and exoribonuclease protein K14845 RAI1; RAT1-interacting protein D 100523074 RIOX1; bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 isoform X1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69] D 110256447 RIOX2; bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform X1 K21760 RIOX2; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine9 demethylase [EC:1.14.11.79 1.14.11.66] D 100624357 NVL; nuclear valosin-containing protein-like isoform X1 K14571 RIX7; ribosome biogenesis ATPase D 100620426 RPF1; ribosome production factor 1 K14846 RPF1; ribosome production factor 1 D 100525264 RPF2; ribosome production factor 2 homolog isoform X1 K14847 RPF2; ribosome production factor 2 D 100521273 GRWD1; glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1 D 100621155 RRP1B; ribosomal RNA processing protein 1 homolog B isoform X1 K14849 RRP1; ribosomal RNA-processing protein 1 D 110256501 RRP1; ribosomal RNA processing protein 1 homolog A isoform X1 K14849 RRP1; ribosomal RNA-processing protein 1 D 100623550 RRP8; ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D 100155987 RRP12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 100737940 NOL12; nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17 D 100521788 RRS1; ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis D 100626208 NLE1; notchless protein homolog 1 isoform X1 K14855 RSA4; ribosome assembly protein 4 D 100521909 SDAD1; protein SDA1 homolog isoform X1 K14856 SDA1; protein SDA1 D 100512190 FTSJ3; pre-rRNA processing protein FTSJ3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 100533476 PPAN; suppressor of SWI4 1 homolog K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D 100517956 TMA16; translation machinery-associated protein 16 isoform X1 K14860 TMA16; translation machinery-associated protein 16 D 110256368 URB1; LOW QUALITY PROTEIN: nucleolar pre-ribosomal-associated protein 1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D 100157881 URB2; LOW QUALITY PROTEIN: unhealthy ribosome biogenesis protein 2 homolog K14862 URB2; nucleolar pre-ribosomal-associated protein 2 D 100512929 WDR12; ribosome biogenesis protein WDR12 K14863 WDR12; ribosome biogenesis protein D 100157882 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 D 100512308 ZNHIT3; zinc finger HIT domain-containing protein 3 isoform X2 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C 100157478 BCCIP; LOW QUALITY PROTEIN: BRCA2 and CDKN1A-interacting protein K15262 BCP1; protein BCP1 C 414404 LYAR; cell growth-regulating nucleolar protein K15263 LYER; cell growth-regulating nucleolar protein C 100524686 NSUN4; LOW QUALITY PROTEIN: 5-methylcytosine rRNA methyltransferase NSUN4 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] C 100524245 NSUN5; probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1 K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C 100147809 TFB1M; dimethyladenosine transferase 1, mitochondrial K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-] C 100513493 MRM1; rRNA methyltransferase 1, mitochondrial K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 100621338 BMT2; probable methyltransferase BMT2 homolog K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] C 100522640 MRM3; rRNA methyltransferase 3, mitochondrial isoform X1 K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-] C 100623403 ZCCHC4; zinc finger CCHC domain-containing protein 4 isoform X1 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-] C 100621490 DDX28; probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7] C 110256102 DHX33; LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase DHX33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6] C 100520173 IGHMBP2; LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] C 448855 ISG20; interferon-stimulated gene 20 kDa protein isoform X2 K12579 ISG20; interferon-stimulated gene 20 kDa protein [EC:3.1.13.1] C 100157573 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 K18329 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 [EC:3.1.-.-] C 100519765 KDM8; lysine-specific demethylase 8 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-] C 100151997 PHF6; PHD finger protein 6 K23310 PHF6; PHD finger protein 6 C 110256053 LOW QUALITY PROTEIN: protein SLFN14-like K24445 SLFN14; protein SLFN14 [EC:3.1.-.-] C 100518578 ERAL1; GTPase Era, mitochondrial isoform X1 K03595 era; GTPase C 100623156 C5H12orf45; uncharacterized protein C12orf45 homolog K26142 NOPCHAP1; NOP protein chaperone 1 C 100737962 PA2G4; proliferation-associated protein 2G4 isoform X1 K26736 PA2G4; ERBB-3 binding protein C 100153322 MTG1; mitochondrial ribosome-associated GTPase 1 isoform X6 K19828 MTG1; mitochondrial GTPase 1 C 110257479 MTG2; mitochondrial ribosome-associated GTPase 2 isoform X1 K03979 obgE; GTPase [EC:3.6.5.-] C 100621115 nitric oxide-associated protein 1-like isoform X1 K19832 NOA1; nitric oxide-associated protein 1 # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D 100512446 NOP56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 100525692 60S ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D 110255317 RPL7A; 60S ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D 100216430 DKC1; H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 100156164 NOP10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors D 100431099 MRM2; rRNA methyltransferase 2, mitochondrial K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors B rRNA processing factors C 100524961 DROSHA; LOW QUALITY PROTEIN: ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] B rRNA helicases B GTPases C 100518578 ERAL1; GTPase Era, mitochondrial isoform X1 K03595 era; GTPase C 110257479 MTG2; mitochondrial ribosome-associated GTPase 2 isoform X1 K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C 110261153 YRDC; yrdC domain-containing protein, mitochondrial isoform X1 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024