+D GENES KO
#
KEGG Orthology (KO) - Syntrophomonas wolfei
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:swo00010]
D Swol_0259 glucokinase / transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
D Swol_0260 mannose-6-phosphate isomerase / glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Swol_2041 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Swol_1170 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Swol_2409 conserved hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Swol_2411 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Swol_0274 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Swol_0272 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Swol_0275 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Swol_1301 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Swol_0276 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Swol_2040 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Swol_1512 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Swol_1978 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Swol_2235 2-oxoisovalerate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1375 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1374 pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_2234 2-ketoacid ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_1377 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_2237 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_1376 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_2236 pyruvate synthase delta chain K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_0036 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Swol_1400 2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Swol_1399 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Swol_0037 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Swol_2154 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_1915 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:swo00020]
D Swol_0378 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Swol_1978 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Swol_0036 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Swol_1400 2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Swol_1399 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Swol_0037 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Swol_1398 2-oxoglutarate oxidoreductase gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Swol_0038 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Swol_1401 4Fe-4S ferredoxin, iron-sulfur binding K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Swol_0519 pyruvate carboxylase, PYKA K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Swol_2235 2-oxoisovalerate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1375 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1374 pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_2234 2-ketoacid ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_1377 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_2237 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_1376 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_2236 pyruvate synthase delta chain K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:swo00030]
D Swol_0260 mannose-6-phosphate isomerase / glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Swol_1223 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Swol_0243 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Swol_0244 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Swol_2410 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Swol_1560 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Swol_0608 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Swol_2154 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_1915 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_0068 Ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Swol_1703 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Swol_1835 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Swol_2411 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Swol_2409 conserved hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Swol_2041 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Swol_1170 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:swo00040]
D Swol_1223 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Swol_0780 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:swo00051]
D Swol_0260 mannose-6-phosphate isomerase / glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Swol_2154 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_1915 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_1914 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Swol_2137 mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Swol_0619 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Swol_0780 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Swol_2041 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Swol_1170 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Swol_2409 conserved hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Swol_2411 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Swol_0274 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:swo00052]
D Swol_0522 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Swol_1942 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Swol_0228 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Swol_0710 NAD dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Swol_2154 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_1915 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_0259 glucokinase / transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
D Swol_2041 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Swol_1170 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
D Swol_0707 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:swo00500]
D Swol_2154 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_1915 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_0259 glucokinase / transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
D Swol_0260 mannose-6-phosphate isomerase / glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:swo00520]
D Swol_2099 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Swol_2100 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Swol_0067 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Swol_0828 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Swol_2469 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Swol_2377 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Swol_1015 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Swol_0728 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Swol_0184 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Swol_0633 UDP-glucose 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D Swol_0705 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D Swol_0706 putative oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Swol_0704 hexapeptide transferase family protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D Swol_0726 polysaccharide biosynthesis domain protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D Swol_0259 glucokinase / transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
D Swol_2154 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_1915 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_0522 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Swol_1942 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Swol_0228 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Swol_0710 NAD dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Swol_0707 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Swol_0260 mannose-6-phosphate isomerase / glucose-6-phosphate isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Swol_2137 mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Swol_1914 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Swol_0619 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:swo00620]
D Swol_2235 2-oxoisovalerate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1375 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1374 pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_2234 2-ketoacid ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_1377 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_2237 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_1376 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_2236 pyruvate synthase delta chain K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_0036 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Swol_1400 2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Swol_1399 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Swol_0037 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Swol_1978 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Swol_1048 Formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Swol_0768 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Swol_0767 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Swol_2040 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Swol_1845 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Swol_0559 biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Swol_1846 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Swol_0808 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Swol_1534 conserved hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Swol_0558 oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Swol_0519 pyruvate carboxylase, PYKA K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Swol_1512 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Swol_1486 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1934 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2051 acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0308 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0675 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0789 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2139 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Swol_2143 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Swol_0375 conserved hypothetical protein K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:swo00630]
D Swol_1486 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1934 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2051 acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0308 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0675 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0789 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1356 (de)hydratase mit MaoC domain K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Swol_1355 acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Swol_1242 acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Swol_1013 D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Swol_1012 glycolate oxidase iron-sulfur subunit, putative K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Swol_1007 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_1787 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_2392 ribose-5-phosphate isomerase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Swol_1981 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Swol_1980 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Swol_1983 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Swol_1978 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Swol_1982 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Swol_1629 Tartrate dehydratase alpha subunit K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32]
D Swol_1628 L(+)-tartrate dehydratase K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32]
D Swol_1825 Formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Swol_0800 formate dehydrogenase-O, major subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Swol_0786 formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Swol_0799 formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Swol_1824 formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Swol_0798 formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Swol_0797 formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Swol_1823 formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Swol_1927 formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:swo00640]
D Swol_0768 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Swol_0767 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Swol_1978 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Swol_2235 2-oxoisovalerate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1375 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1374 pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_2234 2-ketoacid ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_1377 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_2237 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_1376 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_2236 pyruvate synthase delta chain K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_1048 Formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Swol_1845 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Swol_0559 biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Swol_1846 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
C 00650 Butanoate metabolism [PATH:swo00650]
D Swol_1486 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1934 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2051 acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0308 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0675 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0789 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0435 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_0307 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_0791 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_1485 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_1171 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_1935 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_2030 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_1936 short chain enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Swol_2031 short chain enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Swol_0790 short chain enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Swol_2566 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Swol_0650 putative crotonase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Swol_1484 short chain enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Swol_1356 (de)hydratase mit MaoC domain K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Swol_1355 acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Swol_1242 acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Swol_1099 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Swol_1145 conserved hypothetical protein K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Swol_1241 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Swol_1481 Glutaconate CoA-transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D Swol_1048 Formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Swol_2235 2-oxoisovalerate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1375 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1374 pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_2234 2-ketoacid ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_1377 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_2237 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_1376 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_2236 pyruvate synthase delta chain K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_0036 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Swol_1400 2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Swol_1399 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Swol_0037 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Swol_1727 zinc-binding dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Swol_2146 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Swol_2145 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:swo00660]
D Swol_2146 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Swol_2145 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Swol_2142 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Swol_0376 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Swol_2141 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Swol_0377 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Swol_2140 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D Swol_0274 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:swo00190]
D Swol_0656 NADH:ubiquinone oxidoreductase 24 kD subunit-like protein K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Swol_1018 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Swol_1024 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Swol_1828 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Swol_0657 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Swol_1831 NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Swol_0785 NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Swol_1029 NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Swol_1700 2Fe-2S iron-sulfur cluster domain with dehydrogenase K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D Swol_2384 Sodium-transporting two-sector ATPase K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Swol_2382 Sodium-transporting two-sector ATPase K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Swol_2383 Sodium-transporting two-sector ATPase K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Swol_2385 ATP synthase F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Swol_2381 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Swol_2388 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Swol_2386 F0F1-type ATP synthase subunit b-like protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Swol_2387 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Swol_0602 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:swo00680]
D Swol_1825 Formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Swol_0800 formate dehydrogenase-O, major subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Swol_0786 formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Swol_0799 formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Swol_1824 formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Swol_0798 formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Swol_0797 formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Swol_1823 formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Swol_1927 formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Swol_0400 4Fe-4S ferredoxin, iron-sulfur binding K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6]
D Swol_1832 Fe-S-cluster-containing hydrogenase components 2 K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Swol_1834 4Fe-4S ferredoxin, iron-sulfur binding K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Swol_2392 ribose-5-phosphate isomerase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Swol_0276 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Swol_2411 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Swol_2409 conserved hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Swol_2041 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Swol_1170 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Swol_0397 heterodisulfide reductase, subunit A, selenocysteine-containing K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Swol_0395 succinate dehydrogenase subunit C K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Swol_0394 4Fe-4S ferredoxin, iron-sulfur binding K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Swol_0398 heterodisulfide reductase subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D Swol_0768 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Swol_0767 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Swol_2235 2-oxoisovalerate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1375 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1374 pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_2234 2-ketoacid ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_1377 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_2237 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_1376 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_2236 pyruvate synthase delta chain K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_0275 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Swol_1301 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Swol_0009 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Swol_0418 dimethylamine corrinoid protein K16179 mtbC; dimethylamine corrinoid protein
C 00910 Nitrogen metabolism [PATH:swo00910]
D Swol_1521 respiratory nitrite reductase (cytochrome; ammonia-forming) precursor K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D Swol_1522 respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor K15876 nrfH; cytochrome c nitrite reductase small subunit
D Swol_0408 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D Swol_2190 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Swol_1854 conserved hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Swol_2170 glutamate dehydrogenase (NAD/NADP) K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Swol_1007 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_1787 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_2452 Carbonic anhydrase-like protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:swo00920]
D Swol_0902 phosphoesterase, RecJ-like protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Swol_2356 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Swol_1438 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Swol_1605 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:swo00061]
D Swol_1845 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Swol_0559 biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Swol_1846 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Swol_1849 acyl carrier protein K02078 acpP; acyl carrier protein
D Swol_0772 acyl carrier protein K02078 acpP; acyl carrier protein
D Swol_1851 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Swol_1853 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Swol_1848 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Swol_1850 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Swol_1910 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Swol_1847 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Swol_1852 2-nitropropane dioxygenase-like protein K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:swo00071]
D Swol_1486 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1934 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2051 acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0308 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0675 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0789 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:swo00561]
D Swol_0771 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Swol_1324 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Swol_1345 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Swol_1781 acetyltransferase and hydrolase with the alpha/beta hydrolase fold K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D Swol_0965 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:swo00564]
D Swol_1323 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Swol_1324 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Swol_1345 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Swol_0887 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Swol_1031 conserved hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Swol_1261 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Swol_2453 cardiolipin synthetase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D Swol_1162 lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:swo00230]
D Swol_0597 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Swol_0608 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Swol_2154 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_1915 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_0068 Ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Swol_1778 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Swol_1774 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Swol_1776 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Swol_2175 Phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Swol_1777 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Swol_1780 Phosphoribosylaminoimidazole carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Swol_1209 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Swol_1779 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Swol_1775 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Swol_1594 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterases-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Swol_1150 exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Swol_0015 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Swol_1785 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Swol_0916 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Swol_0454 HAM1 protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Swol_1819 medium FAD-binding subunit of molybdenum enzyme K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D Swol_1784 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Swol_1237 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Swol_2273 oxygen-sensitive ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Swol_1509 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D Swol_0806 GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Swol_0090 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Swol_0343 transmembrane sensor domain-like protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Swol_2533 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Swol_1251 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Swol_2312 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Swol_0082 MazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
C 00240 Pyrimidine metabolism [PATH:swo00240]
D Swol_1281 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Swol_1282 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Swol_1284 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Swol_1283 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Swol_1279 dihydroorotate oxidase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Swol_1280 dihydroorotate oxidase B, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Swol_1277 conserved hypothetical protein K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Swol_1278 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Swol_0884 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Swol_0082 MazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Swol_1643 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Swol_2418 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Swol_1346 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Swol_1101 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Swol_1594 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterases-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Swol_1150 exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Swol_1285 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Swol_1251 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Swol_0609 thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D Swol_1562 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Swol_2273 oxygen-sensitive ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Swol_2391 putative ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Swol_0040 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Swol_0911 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Swol_1907 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Swol_1112 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D Swol_2353 thymidylate synthase complementing protein ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:swo00250]
D Swol_2093 aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Swol_0105 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Swol_0712 putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Swol_1393 N-carbamoyl-D-amino acid amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D Swol_2533 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Swol_1779 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Swol_1284 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Swol_2170 glutamate dehydrogenase (NAD/NADP) K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Swol_1007 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_1787 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_1281 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Swol_1282 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Swol_2099 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Swol_1778 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:swo00260]
D Swol_1317 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Swol_1270 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Swol_1319 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Swol_1318 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Swol_1302 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Swol_2392 ribose-5-phosphate isomerase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Swol_0275 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Swol_1301 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Swol_0009 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Swol_1981 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Swol_1980 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Swol_1983 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Swol_1978 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Swol_1982 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Swol_1031 conserved hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Swol_0362 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Swol_0361 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Swol_0644 tryptophan synthase, beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:swo00270]
D Swol_2356 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Swol_1438 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Swol_1605 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Swol_1442 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Swol_0933 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Swol_1234 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Swol_0674 adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Swol_1199 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Swol_0668 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Swol_0015 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Swol_0781 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Swol_1591 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Swol_1593 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Swol_0778 methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D Swol_0779 translation initiation factor 2B subunit I family (IF-2BI) K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Swol_0642 phosphoserine phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D Swol_1128 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Swol_1317 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Swol_1270 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Swol_1319 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Swol_1441 conserved hypothetical cytosolic protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D Swol_1440 ferridoxin K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D Swol_2148 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Swol_2093 aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Swol_0009 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:swo00280]
D Swol_2148 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Swol_1978 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Swol_1486 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1934 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2051 acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0308 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0675 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0789 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:swo00290]
D Swol_2142 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Swol_0376 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Swol_2141 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Swol_0377 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Swol_2140 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Swol_2146 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Swol_2145 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Swol_2144 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Swol_2147 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Swol_2148 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Swol_2139 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Swol_2143 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:swo00300]
D Swol_1319 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Swol_1317 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Swol_1270 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Swol_1269 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Swol_1273 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Swol_2288 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Swol_1422 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Swol_0940 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D Swol_0821 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Swol_0822 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:swo00310]
D Swol_1978 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Swol_1486 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1934 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2051 acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0308 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0675 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0789 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:swo00220]
D Swol_2287 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Swol_1007 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_1787 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_2170 glutamate dehydrogenase (NAD/NADP) K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Swol_2093 aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Swol_2290 N-acetylglutamate synthase / glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Swol_2174 acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D Swol_2289 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Swol_2291 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Swol_2288 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:swo00330]
D Swol_0039 Orn/Lys/Arg decarboxylase, major region K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Swol_1357 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Swol_0667 arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D Swol_0669 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D Swol_1199 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Swol_0668 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Swol_0674 adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Swol_0955 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Swol_1608 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Swol_1607 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Swol_2093 aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:swo00340]
D Swol_1769 ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Swol_1770 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Swol_1764 phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Swol_1766 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Swol_1765 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Swol_1767 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Swol_1198 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Swol_1811 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Swol_0653 Histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Swol_1768 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:swo00350]
D Swol_2093 aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Swol_1198 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Swol_1811 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:swo00360]
D Swol_0815 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Swol_0435 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_0307 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_0791 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_1485 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_1171 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_1935 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_2030 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_2093 aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Swol_1198 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Swol_1811 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:swo00380]
D Swol_1978 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Swol_1486 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1934 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2051 acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0308 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0675 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0789 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:swo00400]
D Swol_1348 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Swol_0363 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Swol_1388 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Swol_1381 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Swol_0809 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Swol_0529 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Swol_0544 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Swol_0528 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Swol_1347 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Swol_0527 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Swol_0364 anthranilate synthase, component I / anthranilate synthase, component II K13503 trpEG; anthranilate synthase [EC:4.1.3.27]
D Swol_0358 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Swol_0360 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Swol_0359 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Swol_0362 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Swol_0361 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Swol_0644 tryptophan synthase, beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Swol_1395 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D Swol_1349 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Swol_0810 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Swol_2093 aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Swol_1198 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Swol_1811 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:swo00410]
D Swol_0103 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Swol_0102 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:swo00430]
D Swol_2170 glutamate dehydrogenase (NAD/NADP) K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D Swol_0767 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Swol_0768 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:swo00450]
D Swol_1442 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Swol_0933 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Swol_1300 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Swol_2471 thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Swol_2542 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Swol_2561 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Swol_0049 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D Swol_2392 ribose-5-phosphate isomerase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:swo00470]
D Swol_1882 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Swol_2416 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Swol_1155 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Swol_0449 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Swol_0824 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Swol_1422 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:swo00480]
D Swol_0378 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Swol_1199 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Swol_0668 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:swo00542]
D Swol_0124 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Swol_0594 conserved hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:swo00541]
D Swol_1942 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Swol_0228 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Swol_0710 NAD dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Swol_0707 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Swol_0634 dTDP-glucose 4,6-dehydratase related protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Swol_0727 carbohydrate oxidoreductase, putative K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Swol_1914 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Swol_0619 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Swol_0067 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Swol_0728 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Swol_0184 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Swol_0633 UDP-glucose 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D Swol_0726 polysaccharide biosynthesis domain protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D Swol_0705 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D Swol_0706 putative oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Swol_0704 hexapeptide transferase family protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:swo00550]
D Swol_0828 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Swol_2469 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Swol_2377 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Swol_1015 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Swol_0827 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Swol_0824 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Swol_0821 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Swol_1155 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Swol_0822 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Swol_1563 Undecaprenol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D Swol_0886 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Swol_1266 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Swol_0823 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Swol_0826 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Swol_1109 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Swol_0921 penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D Swol_1638 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Swol_0489 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Swol_0820 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Swol_0612 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Swol_0909 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Swol_0966 conserved hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D Swol_0967 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:swo00552]
D Swol_1266 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Swol_0124 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Swol_0594 conserved hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Swol_2372 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Swol_1921 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Swol_0125 putative transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Swol_0965 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:swo00543]
D Swol_0124 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Swol_0594 conserved hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Swol_2064 alginate O-acetyltransferase K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Swol_0117 alginate O-acetyltransferase, putative K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Swol_1916 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF
D Swol_2158 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D Swol_2356 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:swo00730]
D Swol_0643 thiamine biosynthesis protein thiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Swol_0639 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Swol_1022 thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Swol_0582 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Swol_0640 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Swol_0641 Thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Swol_1224 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Swol_2104 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Swol_2312 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:swo00740]
D Swol_1220 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Swol_1222 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Swol_1219 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Swol_1221 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Swol_0904 riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Swol_0640 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Swol_0597 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Swol_0679 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:swo00750]
D Swol_1302 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Swol_0007 vitamin B6 biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:swo00760]
D Swol_0105 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Swol_0104 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Swol_0107 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Swol_1594 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterases-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Swol_1150 exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Swol_1603 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Swol_0082 MazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Swol_1437 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Swol_1033 regulatory protein, sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Swol_0584 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:swo00770]
D Swol_2146 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Swol_2145 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Swol_2144 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Swol_2147 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Swol_0101 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Swol_1181 putative oxidoreductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Swol_0102 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Swol_0109 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Swol_1235 Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Swol_0082 MazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Swol_0699 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Swol_2014 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Swol_1885 phosphopantetheinyl transferase (holo-ACP synthase) K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Swol_1085 Phosphopantetheinyl transferase-like protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Swol_2148 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Swol_0103 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:swo00780]
D Swol_1848 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Swol_1850 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Swol_1910 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Swol_1847 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Swol_1020 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Swol_1674 conserved hypothetical protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D Swol_0775 transcriptional repressor of the biotin operon / biotin acetyl-CoA-carboxylase synthetase; RBL03563 K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:swo00785]
D Swol_1974 lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Swol_1978 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Swol_1981 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Swol_1980 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Swol_1983 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Swol_1982 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:swo00790]
D Swol_1408 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Swol_0098 dihydroneopterin aldolase; RBL03201 K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Swol_0099 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Swol_0097 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Swol_1648 conserved hypothetical protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Swol_1220 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Swol_0924 beta-lactamase-like protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Swol_1860 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Swol_1859 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Swol_1857 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Swol_0801 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Swol_0802 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Swol_1026 putative molybdopterin biosynthesis MoeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Swol_1827 putative molybdopterin biosynthesis MoeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Swol_1693 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Swol_1816 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
C 00670 One carbon pool by folate [PATH:swo00670]
D Swol_1409 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Swol_1474 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Swol_0566 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Swol_2392 ribose-5-phosphate isomerase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Swol_1776 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Swol_1775 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Swol_1231 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Swol_0717 Methionyl-tRNA formyltransferase-like protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Swol_1983 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Swol_1442 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Swol_2353 thymidylate synthase complementing protein ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Swol_0934 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Swol_0380 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Swol_1864 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:swo00860]
D Swol_0930 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Swol_0694 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Swol_0203 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Swol_0690 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Swol_0685 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Swol_0417 Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Swol_0687 uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D Swol_0683 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Swol_0692 transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D Swol_0688 metallo cofactor biosynthesis protein K22226 ahbC; Fe-coproporphyrin III synthase
D Swol_0691 radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D Swol_0356 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Swol_1405 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Swol_0446 Mg-chelatase subunit ChlD-like protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Swol_0445 Magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:swo00130]
D Swol_0678 4-hydroxybenzoate polyprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Swol_0677 3-octaprenyl-4hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Swol_0679 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Swol_1589 ComA operon protein (competence protein) K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Swol_1158 conserved hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D Swol_1157 radical SAM domain protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D Swol_1159 conserved hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:swo00900]
D Swol_0582 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Swol_0889 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Swol_2361 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Swol_0064 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Swol_2360 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Swol_0891 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Swol_1344 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D Swol_1486 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1934 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2051 acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0308 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0675 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0789 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0679 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Swol_1341 Isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Swol_0569 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Swol_0680 Trans-hexaprenyltranstransferase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D Swol_0886 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
D Swol_1144 acyl-CoA synthase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Swol_0243 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Swol_0244 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:swo00523]
D Swol_0634 dTDP-glucose 4,6-dehydratase related protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Swol_0727 carbohydrate oxidoreductase, putative K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Swol_0634 dTDP-glucose 4,6-dehydratase related protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:swo00332]
D Swol_1608 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Swol_1607 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:swo00261]
D Swol_1317 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Swol_1270 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Swol_1269 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Swol_1273 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:swo00521]
D Swol_0259 glucokinase / transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
D Swol_2154 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_1915 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Swol_0634 dTDP-glucose 4,6-dehydratase related protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Swol_0727 carbohydrate oxidoreductase, putative K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Swol_0259 glucokinase / transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D Swol_0634 dTDP-glucose 4,6-dehydratase related protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:swo00401]
D Swol_1349 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Swol_2093 aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Swol_1198 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Swol_1811 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Swol_1292 Zn-dependent hydrolases including glyoxylases-like protein K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32]
D Swol_1480 Zn-dependent hydrolases including glyoxylases-like protein K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32]
C 00333 Prodigiosin biosynthesis
D Swol_1851 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Swol_1850 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Swol_1910 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Swol_1849 acyl carrier protein K02078 acpP; acyl carrier protein
D Swol_0772 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D Swol_1234 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:swo00362]
D Swol_0435 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_0307 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_0791 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_1485 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_1171 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_1935 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_2030 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Swol_1486 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1934 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2051 acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0308 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0675 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0789 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D Swol_0679 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D Swol_0408 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:swo00633]
D Swol_1832 Fe-S-cluster-containing hydrogenase components 2 K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Swol_1834 4Fe-4S ferredoxin, iron-sulfur binding K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Swol_2235 2-oxoisovalerate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1375 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Swol_1374 pyruvate synthase subunit porB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_2234 2-ketoacid ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Swol_1377 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_2237 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Swol_1376 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Swol_2236 pyruvate synthase delta chain K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D Swol_1481 Glutaconate CoA-transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:swo03020]
D Swol_2341 DNA-directed RNA polymerase K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Swol_2340 DNA-directed RNA polymerase K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Swol_2304 DNA-directed RNA polymerase K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Swol_1236 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Swol_2420 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:swo03010]
D Swol_1344 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D Swol_0882 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Swol_2327 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Swol_2305 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Swol_2316 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Swol_2540 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Swol_2337 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Swol_2319 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Swol_2297 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Swol_2334 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Swol_2306 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Swol_2338 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Swol_2307 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Swol_2320 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Swol_0905 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Swol_1497 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Swol_2324 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Swol_2538 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Swol_2329 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Swol_1587 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Swol_1573 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D Swol_2345 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Swol_2330 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Swol_2333 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Swol_2332 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Swol_2321 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Swol_2318 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Swol_2343 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Swol_2535 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Swol_2344 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Swol_2346 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Swol_2298 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Swol_2323 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Swol_2314 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Swol_2326 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Swol_2303 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Swol_2317 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Swol_1491 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Swol_1092 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Swol_1613 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Swol_2328 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Swol_2331 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Swol_2322 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Swol_0069 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Swol_1611 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Swol_0757 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Swol_2325 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Swol_2315 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Swol_2399 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Swol_0770 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Swol_2349 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Swol_2577 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Swol_1091 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Swol_2308 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Swol_2339 LSU ribosomal protein L7AE K07590 RP-L7A; large subunit ribosomal protein L7A
D Swol_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Swol_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Swol_R0020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Swol_R0016 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Swol_R0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Swol_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Swol_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0017 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:swo00970]
D Swol_R0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Swol_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Swol_R0055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Swol_R0052 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Swol_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Swol_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Swol_R0032 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Swol_R0046 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Swol_R0040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Swol_R0037 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Swol_R0050 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Swol_R0031 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Swol_R0044 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Swol_R0030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Swol_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Swol_R0038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Swol_R0065 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Swol_R0051 tRNA-His K14226 tRNA-His; tRNA His
D Swol_R0009 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Swol_R0057 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Swol_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Swol_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Swol_R0056 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Swol_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Swol_R0049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Swol_R0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Swol_R0060 tRNA-Met K14230 tRNA-Met; tRNA Met
D Swol_R0062 tRNA-Met K14230 tRNA-Met; tRNA Met
D Swol_R0045 tRNA-Met K14230 tRNA-Met; tRNA Met
D Swol_R0039 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Swol_R0048 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Swol_R0042 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Swol_R0058 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Swol_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Swol_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Swol_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Swol_R0006 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Swol_R0061 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Swol_R0059 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Swol_R0064 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Swol_R0033 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Swol_R0063 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Swol_R0043 tRNA-Val K14237 tRNA-Val; tRNA Val
D Swol_R0029 tRNA-Val K14237 tRNA-Val; tRNA Val
D Swol_R0066 tRNA-Val K14237 tRNA-Val; tRNA Val
D Swol_0930 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Swol_2357 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Swol_0373 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Swol_0374 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Swol_0372 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Swol_2459 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Swol_0468 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Swol_0812 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Swol_1516 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Swol_1515 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Swol_1089 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Swol_0010 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Swol_2561 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Swol_0049 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Swol_1231 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Swol_0717 Methionyl-tRNA formyltransferase-like protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Swol_1649 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Swol_1599 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Swol_0962 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Swol_0116 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Swol_2421 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Swol_0892 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Swol_0811 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Swol_1094 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Swol_1095 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Swol_1110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Swol_0672 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:swo03060]
D Swol_2313 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Swol_2348 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Swol_0277 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Swol_1425 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Swol_1424 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Swol_1427 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Swol_0238 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Swol_1498 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Swol_R0007 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Swol_0777 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Swol_0938 Arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Swol_0682 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Swol_1443 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA
D Swol_0681 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D Swol_1149 thylakoidal processing peptidase. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Swol_1287 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:swo04122]
D Swol_2088 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Swol_0464 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Swol_1163 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Swol_1860 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Swol_1707 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D Swol_1706 ThiF protein, putative K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Swol_1859 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Swol_1857 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:swo03018]
D Swol_0276 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Swol_0906 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Swol_0280 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Swol_1897 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Swol_2408 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Swol_1254 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Swol_1268 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Swol_2041 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Swol_1578 chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_0490 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_1452 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_0386 Molecular chaperone-like protein K04043 dnaK; molecular chaperone DnaK
D Swol_1855 conserved hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Swol_0980 RNA-binding protein Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:swo03030]
D Swol_2043 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Swol_0895 DNA-directed DNA polymerase K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Swol_0030 DNA-directed DNA polymerase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Swol_0042 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Swol_1588 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Swol_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Swol_1201 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Swol_1508 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Swol_2539 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Swol_2115 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Swol_1478 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Swol_2017 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Swol_0369 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:swo03410]
D Swol_0961 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Swol_2016 Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Swol_1870 Uracil-DNA glycosylase-like protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Swol_1210 DNA-(apurinic or apyrimidinic site) lyase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Swol_2017 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Swol_0805 Single-stranded DNA-specific exonuclease-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Swol_0369 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:swo03420]
D Swol_0073 Transcription-repair coupling factor - superfamily II helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Swol_0252 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Swol_0251 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Swol_0254 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Swol_0368 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Swol_2017 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Swol_0369 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:swo03430]
D Swol_0974 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Swol_1108 recombination and DNA strand exchange inhibitor protein K07456 mutS2; DNA mismatch repair protein MutS2
D Swol_0977 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Swol_0368 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Swol_0567 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Swol_0568 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Swol_0805 Single-stranded DNA-specific exonuclease-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Swol_2539 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Swol_2043 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Swol_0895 DNA-directed DNA polymerase K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Swol_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Swol_0030 DNA-directed DNA polymerase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Swol_1588 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Swol_0042 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Swol_0369 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Swol_0503 Site-specific DNA methylase-like protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:swo03440]
D Swol_0805 Single-stranded DNA-specific exonuclease-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Swol_2539 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Swol_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Swol_1558 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Swol_0032 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D Swol_1255 RecA protein K03553 recA; recombination protein RecA
D Swol_2017 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Swol_1432 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Swol_1431 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Swol_1433 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Swol_2085 Exodeoxyribonuclease V K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Swol_2043 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Swol_0895 DNA-directed DNA polymerase K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Swol_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Swol_0030 DNA-directed DNA polymerase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Swol_1588 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Swol_0042 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Swol_1233 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:swo03450]
D Swol_1122 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D Swol_1123 DNA ligase, putative K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Swol_1124 conserved hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:swo02010]
D Swol_1630 ABC-type tungstate transport system permease component-like protein K05772 tupA; tungstate transport system substrate-binding protein
D Swol_1632 sulfate/tungstate uptake family ABC transporter, permease protein K05773 tupB; tungstate transport system permease protein
D Swol_1631 tungsten transporter, ATP binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D Swol_1556 ABC-type molybdate transport system periplasmic component-like protein K02020 modA; molybdate transport system substrate-binding protein
D Swol_1555 molybdenum ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D Swol_1554 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Swol_2479 ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D Swol_2476 ABC-type iron(III)-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein
D Swol_2480 ABC transporter, permease protein, putative K02011 afuB; iron(III) transport system permease protein
D Swol_2477 ABC-type transporter permease protein K02011 afuB; iron(III) transport system permease protein
D Swol_2481 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Swol_2478 thiamine transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Swol_1738 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Swol_1736 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Swol_1737 putative glycine betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Swol_0409 putative maltose ABC transportor K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Swol_2228 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Swol_0423 putative sugar ABC transporter, substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D Swol_0425 putative sugar ABC transporter, permease protein K10560 rhaP; rhamnose transport system permease protein
D Swol_0424 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10561 rhaQ; rhamnose transport system permease protein
D Swol_0426 ABC-type sugar (aldose) transport system, ATPase component K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D Swol_1070 glutamine ABC transporter, glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D Swol_1071 conserved hypothetical protein K10037 glnP; glutamine transport system permease protein
D Swol_1072 glutamine ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Swol_1739 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K17077 artQ; arginine/lysine/histidine transport system permease protein
D Swol_1740 ATPase K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Swol_1059 conserved hypothetical protein K17076 lysY; putative lysine transport system ATP-binding protein
D Swol_2556 branched chain amino acid ABC transporter (substrate-binding protein) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Swol_2113 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Swol_2555 high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D Swol_2112 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D Swol_2554 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Swol_2111 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D Swol_2553 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Swol_2110 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Swol_2552 branched-chain amino acid ABC transporter (ATP-binding protein) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Swol_2432 conserved hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D Swol_2431 ABC metal ion transporter, inner membrane subunit K02072 metI; D-methionine transport system permease protein
D Swol_2430 conserved hypothetical protein K02071 metN; D-methionine transport system ATP-binding protein
D Swol_1891 cation ABC transporter, periplasmc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D Swol_1889 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D Swol_1890 ABC-type zinc transport system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Swol_0108 conserved hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D Swol_2300 cobalt ABC transporter permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D Swol_1947 cobalt ABC transporter permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D Swol_1950 ABC-type cobalt transport system permease component CbiQ and related transporters-like protein K16785 ecfT; energy-coupling factor transport system permease protein
D Swol_1045 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Swol_2302 putative ABC transporter K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_1949 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_1952 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_1948 ABC-type transporter, ATPase component (cobalt transporters subfamily) K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_2301 putative ABC transporter K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_1951 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_0246 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Swol_0245 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:swo03070]
D Swol_1425 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Swol_1424 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Swol_2348 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Swol_0277 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Swol_2313 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Swol_1427 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Swol_0238 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Swol_0777 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Swol_1498 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Swol_0682 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Swol_1443 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA
D Swol_0681 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:swo02020]
D Swol_0952 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Swol_0951 response regulator receiver protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Swol_2184 Trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D Swol_1169 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Swol_0198 Flagellin and related hook-associated proteins-like protein K02406 fliC; flagellin
D Swol_0878 putative RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D Swol_0239 conserved hypothetical protein K02556 motA; chemotaxis protein MotA
D Swol_2441 response regulator receiver protein K07668 vicR; two-component system, OmpR family, response regulator VicR
D Swol_0001 initiation of chromosome replication K02313 dnaA; chromosomal replication initiator protein
D Swol_1358 Uncharacterized vancomycin resistance protein-like protein K18346 vanW; vancomycin resistance protein VanW
D Swol_1918 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Swol_1054 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Swol_2412 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D Swol_0590 response regulator receiver protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Swol_1290 accessory gene regulator B K07813 agrB; accessory gene regulator B
D Swol_0196 carbon storage regulator K03563 csrA; carbon storage regulator
D Swol_0185 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D Swol_1007 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_1787 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_1486 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1934 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2051 acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0308 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0675 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0789 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0265 sigma-54 (RpoN) K03092 rpoN; RNA polymerase sigma-54 factor
D Swol_0534 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Swol_0695 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Swol_1330 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Swol_1457 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Swol_1451 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_2152 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_2162 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_0927 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_2151 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_0875 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Swol_1450 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Swol_1886 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Swol_1332 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0874 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_1455 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0353 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0863 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1456 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1327 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1448 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1333 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_0334 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_0355 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1329 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Swol_1449 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Swol_0873 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Swol_0322 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Swol_0728 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Swol_0184 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Swol_0633 UDP-glucose 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D Swol_0190 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:swo02024]
D Swol_0980 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Swol_1292 Zn-dependent hydrolases including glyoxylases-like protein K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32]
D Swol_1480 Zn-dependent hydrolases including glyoxylases-like protein K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32]
D Swol_2556 branched chain amino acid ABC transporter (substrate-binding protein) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Swol_2113 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Swol_2555 high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D Swol_2112 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D Swol_2554 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Swol_2111 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D Swol_2553 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Swol_2110 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Swol_2552 branched-chain amino acid ABC transporter (ATP-binding protein) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Swol_0322 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Swol_1222 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Swol_1140 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Swol_1290 accessory gene regulator B K07813 agrB; accessory gene regulator B
D Swol_2012 ABC-type dipeptide transport system periplasmic component-like protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Swol_0162 fervidolysin. Serine peptidase. MEROPS family S08A K14645 K14645; serine protease [EC:3.4.21.-]
D Swol_2348 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Swol_0277 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Swol_2313 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Swol_1427 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Swol_0238 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Swol_0777 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Swol_1498 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Swol_2412 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D Swol_0590 response regulator receiver protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:swo02030]
D Swol_1451 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_2152 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_2162 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_0927 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_2151 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_1332 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0874 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_1455 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0353 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0875 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Swol_1450 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Swol_1886 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Swol_0863 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1456 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1327 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1448 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1333 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_0334 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_0355 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_0876 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Swol_0335 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Swol_1446 CheX protein (uncharacterized ORF in chemotaxis operon) K03409 cheX; chemotaxis protein CheX
D Swol_1447 chemotaxis operon protein K03409 cheX; chemotaxis protein CheX
D Swol_1329 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Swol_1449 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Swol_0873 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Swol_0877 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Swol_0695 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Swol_1330 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Swol_1457 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Swol_0861 conserved hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D Swol_0862 CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D Swol_0239 conserved hypothetical protein K02556 motA; chemotaxis protein MotA
D Swol_0240 conserved hypothetical protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:swo02040]
D Swol_0848 flagellar hook-basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE
D Swol_0849 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Swol_0851 Flagellar biosynthesis/type III secretory pathway protein-like protein K02411 fliH; flagellar assembly protein FliH
D Swol_0852 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Swol_0853 hypothetical protein K02413 fliJ; flagellar protein FliJ
D Swol_0855 Flagellar hook-length control protein-like protein K02414 fliK; flagellar hook-length control protein FliK
D Swol_0860 flagellar protein (FliL)-like protein K02415 fliL; flagellar protein FliL
D Swol_0861 conserved hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D Swol_0862 CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D Swol_0864 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Swol_0865 flagellar biosynthetic protein K02419 fliP; flagellar biosynthesis protein FliP
D Swol_0866 conserved hypothetical protein K02420 fliQ; flagellar biosynthesis protein FliQ
D Swol_0867 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Swol_0869 flagella-associated protein K02400 flhA; flagellar biosynthesis protein FlhA
D Swol_0868 flagellar biosynthesis/type III secretory pathway protein K02401 flhB; flagellar biosynthesis protein FlhB
D Swol_0846 conserved hypothetical protein K02387 flgB; flagellar basal-body rod protein FlgB
D Swol_0847 flagellar basal body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D Swol_0856 Flagellar hook capping protein-like protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Swol_0858 flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D Swol_2373 flagellar basal-body rod protein (flgG-2) K02391 flgF; flagellar basal-body rod protein FlgF
D Swol_0947 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Swol_0946 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D Swol_0192 Flagellar hook-associated protein-like protein K02396 flgK; flagellar hook-associated protein 1
D Swol_0193 Flagellin and related hook-associated proteins-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D Swol_0198 Flagellin and related hook-associated proteins-like protein K02406 fliC; flagellin
D Swol_0197 Flagellar capping protein-like protein K02407 fliD; flagellar hook-associated protein 2
D Swol_0232 Flagellin-specific chaperone FliS-like protein K02422 fliS; flagellar secretion chaperone FliS
D Swol_0239 conserved hypothetical protein K02556 motA; chemotaxis protein MotA
D Swol_0240 conserved hypothetical protein K02557 motB; chemotaxis protein MotB
D Swol_0190 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Swol_1507 sigma 38 (RpoS) K03086 rpoD; RNA polymerase primary sigma factor
D Swol_0265 sigma-54 (RpoN) K03092 rpoN; RNA polymerase sigma-54 factor
D Swol_0878 putative RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Swol_0276 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D Swol_1442 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:swo01501]
D Swol_0431 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component-like protein K02172 blaR1; bla regulator protein blaR1
D Swol_0429 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Swol_1109 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Swol_1638 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Swol_0489 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:swo01502]
D Swol_1155 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Swol_1882 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Swol_2416 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Swol_0822 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Swol_0823 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Swol_0826 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Swol_1358 Uncharacterized vancomycin resistance protein-like protein K18346 vanW; vancomycin resistance protein VanW
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:swo01503]
D Swol_0126 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Swol_2295 N-acetylmuramoyl-L-alanine amidase-like protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Swol_2184 Trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D Swol_1169 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:swo01000]
C 01001 Protein kinases [BR:swo01001]
D Swol_1225 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Swol_1794 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Swol_0952 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Swol_0185 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D Swol_1918 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Swol_1054 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Swol_1332 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0874 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_1455 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0353 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:swo01009]
D Swol_1128 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Swol_2041 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Swol_1226 serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:swo01002]
D Swol_1287 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Swol_0538 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Swol_0761 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D Swol_0834 sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04 K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D Swol_1784 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Swol_1878 conserved hypothetical protein K07010 K07010; putative glutamine amidotransferase
D Swol_1247 putative cell-wall associated endopeptidase K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-]
D Swol_1778 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Swol_2099 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Swol_0712 putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Swol_1290 accessory gene regulator B K07813 agrB; accessory gene regulator B
D Swol_1663 ErfK/YbiS/YcfS/YnhG K16291 erfK; L,D-transpeptidase ErfK/SrfK
D Swol_2118 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D Swol_1920 oligopeptidase F. Metallo peptidase. MEROPS family M03B K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Swol_1249 thermostable dipeptidase. Metallo peptidase. MEROPS family M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Swol_0595 tripeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Swol_1733 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Swol_2311 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Swol_0545 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Swol_1352 isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D Swol_0095 FtsH-2 peptidase. Metallo peptidase. MEROPS family M41 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Swol_1258 Vesicle-fusing ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Swol_1617 putative protease K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D Swol_0890 peptidase M50, putative membrane-associated zinc metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Swol_0431 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component-like protein K02172 blaR1; bla regulator protein blaR1
D Swol_2184 Trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D Swol_1169 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Swol_1086 intracellular serine protease K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D Swol_0162 fervidolysin. Serine peptidase. MEROPS family S08A K14645 K14645; serine protease [EC:3.4.21.-]
D Swol_0612 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Swol_0909 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Swol_1656 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Swol_2488 ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Swol_2534 putative ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Swol_1653 Lon-A peptidase. Serine peptidase. MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Swol_0999 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Swol_1654 Endopeptidase La K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D Swol_1008 Repressor lexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Swol_1149 thylakoidal processing peptidase. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Swol_1732 C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Swol_0168 C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Swol_0248 C-terminal processing peptidase-2. Serine peptidase. MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Swol_2415 signal peptide peptidase A. Serine peptidase. MEROPS family S49 K04773 sppA; protease IV [EC:3.4.21.-]
D Swol_1351 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D Swol_2049 uncharacterized membrane protein K07059 K07059; rhomboid family protein
D Swol_0589 SpoIVB peptidase. Serine peptidase. MEROPS family S55 K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D Swol_0843 CodW component of CodWX peptidase. Threonine peptidase. MEROPS family T01B K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Swol_1107 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Swol_0474 collagenase family protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Swol_0957 Collagenase and related proteases-like protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Swol_0543 peptidase U62, modulator of DNA gyrase K03592 pmbA; PmbA protein
D Swol_0542 microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:swo01003]
D Swol_1908 Glycosyltransferases involved in cell wall biogenesis-like protein K23683 aglD; glycosyltransferase AglD [EC:2.4.1.-]
D Swol_2157 Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Swol_0965 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Swol_1109 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Swol_0921 penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D Swol_1916 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF
D Swol_2372 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Swol_0124 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Swol_0594 conserved hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Swol_2158 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:swo01005]
D Swol_0731 glycosyl transferase, group 4 family protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
D Swol_0124 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Swol_0594 conserved hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:swo01011]
D Swol_0828 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Swol_2469 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Swol_2377 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Swol_1015 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Swol_0827 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Swol_0824 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Swol_0821 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Swol_1155 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Swol_1882 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Swol_2416 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Swol_0449 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Swol_0823 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Swol_0826 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Swol_1266 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Swol_1584 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Swol_0122 uncharacterized membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D Swol_1109 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Swol_0921 penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D Swol_1638 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Swol_0489 Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Swol_0820 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Swol_0612 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Swol_0909 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Swol_1663 ErfK/YbiS/YcfS/YnhG K16291 erfK; L,D-transpeptidase ErfK/SrfK
D Swol_1247 putative cell-wall associated endopeptidase K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-]
D Swol_2013 secreted protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Swol_0473 periplasmic solute-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Swol_2376 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Swol_2108 sporulation protein and related proteins K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Swol_0126 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Swol_2295 N-acetylmuramoyl-L-alanine amidase-like protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:swo01004]
D Swol_1851 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Swol_1853 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Swol_1848 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Swol_1850 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Swol_1910 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Swol_1847 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Swol_1852 2-nitropropane dioxygenase-like protein K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Swol_1162 lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Swol_1144 acyl-CoA synthase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-]
D Swol_0771 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Swol_1324 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Swol_1345 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:swo01008]
C 01006 Prenyltransferases [BR:swo01006]
D Swol_0569 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Swol_0680 Trans-hexaprenyltranstransferase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D Swol_0886 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Swol_0979 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Swol_0678 4-hydroxybenzoate polyprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:swo01007]
D Swol_0930 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Swol_2459 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Swol_2357 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Swol_1110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Swol_0672 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Swol_2421 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Swol_0049 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Swol_0962 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Swol_1649 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Swol_1599 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Swol_0116 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Swol_0812 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Swol_0811 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Swol_1516 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Swol_1515 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Swol_0010 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Swol_0892 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Swol_1089 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Swol_0468 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Swol_1094 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Swol_1095 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Swol_2093 aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Swol_1205 aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D Swol_1198 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Swol_1811 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Swol_2288 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Swol_0694 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Swol_0203 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Swol_2148 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:swo00194]
D Swol_2381 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Swol_2382 Sodium-transporting two-sector ATPase K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Swol_2383 Sodium-transporting two-sector ATPase K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Swol_2384 Sodium-transporting two-sector ATPase K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Swol_2385 ATP synthase F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Swol_2386 F0F1-type ATP synthase subunit b-like protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Swol_2387 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Swol_2388 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Swol_2389 conserved hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:swo03000]
D Swol_0296 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain-like protein K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D Swol_0666 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Swol_1191 putative transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Swol_2375 stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D Swol_1514 CBS domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D Swol_2450 putative transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D Swol_1080 ATP-dependent transcriptional regulator-like protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D Swol_2065 ATP-dependent transcriptional regulator-like protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D Swol_2127 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Swol_0269 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Swol_0492 hypothetical protein K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D Swol_1892 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Swol_0660 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Swol_0322 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Swol_2189 conserved hypothetical protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D Swol_0936 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Swol_2087 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Swol_1535 iron-dependent transcriptional repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D Swol_0429 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Swol_0775 transcriptional repressor of the biotin operon / biotin acetyl-CoA-carboxylase synthetase; RBL03563 K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Swol_0483 putative plasmid maintenance system antidote protein, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Swol_1369 transcriptional regulators-like protein K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D Swol_1699 acetoin operon expression regulatory protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Swol_1190 molybdenum-pterin-binding protein K02019 modE; molybdate transport system regulatory protein
D Swol_1645 CoA-binding K01926 rex; redox-sensing transcriptional repressor
D Swol_0845 transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D Swol_1464 hypothetical protein K07727 K07727; putative transcriptional regulator
D Swol_2033 conserved hypothetical protein K07729 K07729; putative transcriptional regulator
D Swol_1880 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Swol_0461 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Swol_0047 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D Swol_0080 transcriptional regulator, AbrB family K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D Swol_2567 chromosome segregation DNA-binding protein / transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Swol_2569 transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Swol_0585 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism
D Swol_1581 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Swol_2370 Transcriptional repressor of class III stress genes-like protein K03708 ctsR; transcriptional regulator of stress and heat shock response
D Swol_0271 transcriptional regulator K05311 cggR; central glycolytic genes regulator
D Swol_2042 transcription attenuation protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D Swol_1285 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Swol_0949 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D Swol_0817 protein of unknown function UPF0040 K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:swo03021]
D Swol_2304 DNA-directed RNA polymerase K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Swol_2341 DNA-directed RNA polymerase K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Swol_2340 DNA-directed RNA polymerase K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Swol_2420 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D Swol_1236 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Swol_1507 sigma 38 (RpoS) K03086 rpoD; RNA polymerase primary sigma factor
D Swol_1212 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Swol_0132 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Swol_2058 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Swol_2523 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Swol_1791 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Swol_0835 sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Swol_0836 RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Swol_0517 sigma 28 (flagella/sporulation) K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Swol_0615 sigma 28 (flagella/sporulation) K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Swol_0501 sigma 28 (flagella/sporulation) K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Swol_2351 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor
D Swol_0944 RNA polymerase sigma factor K03093 sigI; RNA polymerase sigma-I factor
D Swol_0265 sigma-54 (RpoN) K03092 rpoN; RNA polymerase sigma-54 factor
D Swol_0878 putative RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D Swol_0897 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Swol_0564 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Swol_2347 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Swol_1793 Serine phosphatase RsbU regulator of sigma subunit-like protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Swol_2060 serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Swol_1795 anti-anti-sigma regulatory factor, SpoIIAA K04749 rsbV; anti-sigma B factor antagonist
D Swol_1794 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Swol_0115 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D Swol_2408 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:swo03019]
D Swol_1614 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Swol_0773 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Swol_1268 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Swol_1254 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Swol_0280 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Swol_2404 HD-superfamily hydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D Swol_1897 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Swol_0276 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Swol_0906 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Swol_2408 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Swol_2041 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Swol_1578 chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_0490 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_1452 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_0386 Molecular chaperone-like protein K04043 dnaK; molecular chaperone DnaK
D Swol_1855 conserved hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Swol_0980 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Swol_0196 carbon storage regulator K03563 csrA; carbon storage regulator
D Swol_0262 uncharacterised P-loop ATPase protein UPF0042 K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:swo03011]
D Swol_1344 hydroxymethylbutenyl pyrophosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D Swol_0882 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Swol_2327 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Swol_2305 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Swol_2316 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Swol_2540 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Swol_2337 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Swol_2319 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Swol_2297 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Swol_2334 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Swol_2306 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Swol_2338 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Swol_2307 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Swol_2320 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Swol_0905 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Swol_1497 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Swol_2324 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Swol_2538 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Swol_2329 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Swol_1587 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Swol_1573 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D Swol_2345 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Swol_2330 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Swol_2333 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Swol_2332 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Swol_2321 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Swol_2318 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Swol_2535 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Swol_2344 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Swol_2346 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Swol_2343 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Swol_2298 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Swol_2323 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Swol_2314 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Swol_2326 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Swol_2303 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Swol_2317 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Swol_1491 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Swol_1092 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Swol_1613 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Swol_2328 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Swol_2331 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Swol_2322 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Swol_1611 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Swol_0757 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Swol_2325 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Swol_2315 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Swol_2399 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Swol_0770 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Swol_2349 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Swol_2577 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Swol_1091 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Swol_2308 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Swol_0069 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Swol_2339 LSU ribosomal protein L7AE K07590 RP-L7A; large subunit ribosomal protein L7A
D Swol_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0017 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Swol_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Swol_R0020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Swol_R0016 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Swol_R0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Swol_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:swo03009]
D Swol_0773 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Swol_1561 GTP-binding protein Era, Era/TrmE family K03595 era; GTPase
D Swol_1609 spo0B-associated GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D Swol_0897 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Swol_0564 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Swol_2347 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Swol_0053 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Swol_1228 conserved hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Swol_1575 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Swol_2570 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Swol_0046 methyltransferases K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Swol_0978 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D Swol_0583 conserved hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Swol_2352 conserved hypothetical tRNA/rRNA methyltransferase yacO K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Swol_2467 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Swol_1227 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Swol_2225 tRNA (uracil-5-) -methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Swol_1406 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Swol_1286 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Swol_1867 SSU ribosomal protein S18P alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Swol_1494 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Swol_1262 2-methylthioadenine synthetase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Swol_1576 LSU ribosomal protein L11P methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Swol_1614 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Swol_0470 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Swol_2354 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D Swol_1897 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Swol_1224 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Swol_1325 conserved hypothetical protein K03977 engA; GTPase
D Swol_1490 Ras superfamily GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D Swol_1922 GTPase K03665 hflX; GTPase
D Swol_2395 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Swol_0806 GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Swol_0901 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Swol_0896 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D Swol_1601 iojap-related protein K09710 ybeB; ribosome-associated protein
D Swol_1564 metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D Swol_0237 sigma 54 modulation protein / SSU ribosomal protein S30P K05808 hpf; ribosome hibernation promoting factor
D Swol_1173 conserved hypothetical protein K06942 ychF; ribosome-binding ATPase
D Swol_0769 metal-binding possibly nucleic acid-binding protein-like protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:swo03016]
D Swol_1813 tRNA nucleotidyltransferase (CCA-adding enzyme) K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Swol_1420 polyA polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Swol_1799 putative RNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Swol_0930 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Swol_0892 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Swol_0962 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Swol_1599 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Swol_0049 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Swol_2459 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Swol_2421 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Swol_0116 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Swol_0812 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Swol_0468 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Swol_1089 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Swol_0010 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Swol_1649 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Swol_0811 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Swol_1094 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Swol_1095 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Swol_1110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Swol_0672 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Swol_0807 D-Tyr-tRNAtyr deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Swol_1572 diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Swol_2292 conserved hypothetical cytosolic protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D Swol_2299 Pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Swol_0903 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Swol_2395 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Swol_0979 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Swol_2572 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Swol_2571 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Swol_2542 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Swol_2576 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Swol_R0068 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Swol_0453 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Swol_1256 putative integral membrane transport protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Swol_1516 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Swol_1515 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Swol_2357 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Swol_0013 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Swol_0110 putative TIM-barrel protein, NifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Swol_0972 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Swol_1574 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Swol_0841 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Swol_1493 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Swol_0645 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D Swol_2107 rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Swol_0045 SAM-dependent methyltransferases K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D Swol_1093 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D Swol_0464 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Swol_1163 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Swol_1011 ATPase of the pp-loop superfamily K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Swol_2088 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Swol_1429 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Swol_1430 conserved hypothetical cytosolic protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D Swol_1428 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Swol_0094 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Swol_1868 metal-dependent protease-like protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Swol_1866 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Swol_1869 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Swol_0813 conserved hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Swol_0766 conserved hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D Swol_0280 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Swol_0906 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:swo03012]
D Swol_0900 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Swol_1090 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Swol_0883 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Swol_2335 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Swol_2350 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Swol_1152 translation elongation factor G K02355 fusA; elongation factor G
D Swol_2336 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Swol_1214 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Swol_2560 selenocysteine-specific translation elongation factor SelB K03833 selB; selenocysteine-specific elongation factor
D Swol_2397 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D Swol_0885 ribosome recycling factor K02838 frr; ribosome recycling factor
D Swol_2396 peptide release factor-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Swol_0070 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Swol_2309 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D Swol_0546 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D Swol_0241 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:swo03110]
D Swol_0493 putative ATPase with chaperone activity, two ATP-binding domains K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Swol_2367 ATPases with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Swol_1655 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Swol_0844 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Swol_1578 chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_0490 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_1452 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_0386 Molecular chaperone-like protein K04043 dnaK; molecular chaperone DnaK
D Swol_1855 conserved hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Swol_1416 expressed protein K19373 DNAJC28; DnaJ homolog subfamily C member 28
D Swol_1577 chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Swol_0491 dnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Swol_1579 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Swol_0588 heat shock protein, molecular chaperone K13993 HSP20; HSP20 family protein
D Swol_1856 groes K04078 groES; chaperonin GroES
D Swol_2184 Trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D Swol_1169 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Swol_0095 FtsH-2 peptidase. Metallo peptidase. MEROPS family M41 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Swol_1258 Vesicle-fusing ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Swol_2388 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Swol_1086 intracellular serine protease K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D Swol_0162 fervidolysin. Serine peptidase. MEROPS family S08A K14645 K14645; serine protease [EC:3.4.21.-]
D Swol_2433 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Swol_0462 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:swo04131]
D Swol_0938 Arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Swol_0272 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Swol_2040 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:swo03032]
D Swol_2115 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Swol_0083 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Swol_0648 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Swol_0001 initiation of chromosome replication K02313 dnaA; chromosomal replication initiator protein
D Swol_1201 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Swol_1508 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Swol_2539 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Swol_2043 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Swol_0895 DNA-directed DNA polymerase K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Swol_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Swol_1588 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Swol_0042 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Swol_0030 DNA-directed DNA polymerase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Swol_1478 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Swol_2017 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Swol_0369 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Swol_0503 Site-specific DNA methylase-like protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Swol_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Swol_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Swol_0840 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Swol_0497 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:swo03036]
D Swol_0773 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Swol_0083 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Swol_0648 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Swol_0491 dnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Swol_0001 initiation of chromosome replication K02313 dnaA; chromosomal replication initiator protein
D Swol_0980 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Swol_0776 condensin subunit Smc K03529 smc; chromosome segregation protein
D Swol_1418 condensin subunit ScpA K05896 scpA; segregation and condensation protein A
D Swol_1417 condensin subunit ScpB K06024 scpB; segregation and condensation protein B
D Swol_0832 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Swol_0245 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Swol_1265 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Swol_0819 hypothetical protein K03586 ftsL; cell division protein FtsL
D Swol_0829 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D Swol_0825 cell cycle protein K03588 ftsW; cell division protein FtsW
D Swol_0246 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Swol_0833 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Swol_1104 cell division protein ZapA K09888 zapA; cell division protein ZapA
D Swol_0126 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Swol_2295 N-acetylmuramoyl-L-alanine amidase-like protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Swol_1637 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Swol_0344 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Swol_1636 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Swol_0346 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Swol_1635 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Swol_0345 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Swol_0958 Cell division initiation protein K04074 divIVA; cell division initiation protein
D Swol_0954 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D Swol_1641 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Swol_2374 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Swol_1640 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Swol_1639 conserved hypothetical protein K03571 mreD; rod shape-determining protein MreD
D Swol_1634 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Swol_2568 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Swol_1454 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D Swol_0223 conserved hypothetical regulatory protein K03496 parA; chromosome partitioning protein
D Swol_0744 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D Swol_2567 chromosome segregation DNA-binding protein / transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Swol_2569 transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Swol_2571 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Swol_2570 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Swol_0841 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Swol_0842 conserved hypothetical protein K03733 xerC; integrase/recombinase XerC
D Swol_0607 tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD
D Swol_1316 integrase/recombinase K04763 xerD; integrase/recombinase XerD
D Swol_0736 integrase/recombinase K04763 xerD; integrase/recombinase XerD
D Swol_0738 integrase/recombinase K04763 xerD; integrase/recombinase XerD
D Swol_0739 Site-specific recombinase XerD-like protein K04763 xerD; integrase/recombinase XerD
D Swol_0160 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Swol_1652 GTP-binding protein K03978 engB; GTP-binding protein
D Swol_0264 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:swo03400]
D Swol_1600 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Swol_0961 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Swol_0911 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Swol_1907 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Swol_0296 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain-like protein K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D Swol_1870 Uracil-DNA glycosylase-like protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Swol_2016 Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Swol_1210 DNA-(apurinic or apyrimidinic site) lyase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Swol_0805 Single-stranded DNA-specific exonuclease-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Swol_0369 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Swol_2017 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Swol_0252 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Swol_0251 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Swol_0254 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Swol_0368 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Swol_2341 DNA-directed RNA polymerase K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Swol_2340 DNA-directed RNA polymerase K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Swol_2304 DNA-directed RNA polymerase K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Swol_2420 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D Swol_1236 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Swol_0073 Transcription-repair coupling factor - superfamily II helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Swol_0974 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Swol_1108 recombination and DNA strand exchange inhibitor protein K07456 mutS2; DNA mismatch repair protein MutS2
D Swol_0977 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Swol_0567 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Swol_0568 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Swol_2043 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Swol_0895 DNA-directed DNA polymerase K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Swol_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Swol_1588 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Swol_0042 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Swol_0030 DNA-directed DNA polymerase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Swol_2539 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Swol_0503 Site-specific DNA methylase-like protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Swol_2085 Exodeoxyribonuclease V K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Swol_1255 RecA protein K03553 recA; recombination protein RecA
D Swol_1432 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Swol_1431 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Swol_1433 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Swol_1233 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Swol_1730 exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50
D Swol_1731 Exodeoxyribonuclease I subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D Swol_2366 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Swol_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Swol_1558 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Swol_0032 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D Swol_0587 DNA repair and genetic recombination protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D Swol_1146 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D Swol_1142 DNA helicase/exodeoxyribonuclease V, subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Swol_1749 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Swol_2516 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Swol_0480 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Swol_1803 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Swol_1122 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D Swol_1123 DNA ligase, putative K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Swol_1124 conserved hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Swol_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Swol_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Swol_0840 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Swol_0083 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Swol_0648 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Swol_1362 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Swol_1670 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Swol_1008 Repressor lexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Swol_1105 DNA-dependent DNA polymerase family X K02347 polX; DNA polymerase (family X)
D Swol_0507 UvrD/REP helicase family protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D Swol_1132 conserved hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Swol_0902 phosphoesterase, RecJ-like protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:swo03029]
D Swol_0900 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Swol_1090 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Swol_0883 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Swol_2335 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Swol_2350 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Swol_1152 translation elongation factor G K02355 fusA; elongation factor G
D Swol_2336 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Swol_1214 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Swol_1067 conserved hypothetical protein K16639 LACTB2; endoribonuclease LACTB2 [EC:3.1.27.-]
D Swol_1561 GTP-binding protein Era, Era/TrmE family K03595 era; GTPase
D Swol_1110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Swol_1599 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Swol_0812 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Swol_2421 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Swol_0373 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Swol_0374 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Swol_0372 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Swol_2539 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Swol_1578 chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_0490 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_1452 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_0386 Molecular chaperone-like protein K04043 dnaK; molecular chaperone DnaK
D Swol_1579 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Swol_1855 conserved hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Swol_1856 groes K04078 groES; chaperonin GroES
D Swol_1577 chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Swol_2167 SPFH domain, Band 7 family protein K17081 PHB2; prohibitin 2
D Swol_2402 hypothetical protein K17081 PHB2; prohibitin 2
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:swo02000]
D Swol_1556 ABC-type molybdate transport system periplasmic component-like protein K02020 modA; molybdate transport system substrate-binding protein
D Swol_1555 molybdenum ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D Swol_1554 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Swol_1630 ABC-type tungstate transport system permease component-like protein K05772 tupA; tungstate transport system substrate-binding protein
D Swol_1632 sulfate/tungstate uptake family ABC transporter, permease protein K05773 tupB; tungstate transport system permease protein
D Swol_1631 tungsten transporter, ATP binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D Swol_2479 ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D Swol_2476 ABC-type iron(III)-binding periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein
D Swol_2480 ABC transporter, permease protein, putative K02011 afuB; iron(III) transport system permease protein
D Swol_2477 ABC-type transporter permease protein K02011 afuB; iron(III) transport system permease protein
D Swol_2481 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Swol_2478 thiamine transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Swol_1738 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Swol_1736 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Swol_1737 putative glycine betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Swol_0341 putative sulfonate transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Swol_0340 putative sulfonate transport system permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Swol_0339 putative sulfonate transport system ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Swol_0409 putative maltose ABC transportor K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Swol_0423 putative sugar ABC transporter, substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D Swol_0425 putative sugar ABC transporter, permease protein K10560 rhaP; rhamnose transport system permease protein
D Swol_0424 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10561 rhaQ; rhamnose transport system permease protein
D Swol_0426 ABC-type sugar (aldose) transport system, ATPase component K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D Swol_2228 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Swol_0405 ABC-type sugar transport system periplasmic component-like protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Swol_0404 ABC sugar transporter, inner membrane subunit K02025 ABC.MS.P; multiple sugar transport system permease protein
D Swol_0416 ABC transporter integral membrane protein K02057 ABC.SS.P; simple sugar transport system permease protein
D Swol_0415 ABC transporter integral membrane protein K02057 ABC.SS.P; simple sugar transport system permease protein
D Swol_0414 sugar transport ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Swol_1070 glutamine ABC transporter, glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D Swol_1071 conserved hypothetical protein K10037 glnP; glutamine transport system permease protein
D Swol_1072 glutamine ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Swol_1739 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K17077 artQ; arginine/lysine/histidine transport system permease protein
D Swol_1740 ATPase K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Swol_2556 branched chain amino acid ABC transporter (substrate-binding protein) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Swol_2113 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Swol_2555 high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D Swol_2112 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D Swol_2554 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Swol_2111 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D Swol_2553 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Swol_2110 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Swol_2552 branched-chain amino acid ABC transporter (ATP-binding protein) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Swol_2432 conserved hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D Swol_2431 ABC metal ion transporter, inner membrane subunit K02072 metI; D-methionine transport system permease protein
D Swol_2430 conserved hypothetical protein K02071 metN; D-methionine transport system ATP-binding protein
D Swol_0325 conserved hypothetical protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D Swol_0324 conserved hypothetical protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D Swol_0323 conserved hypothetical protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D Swol_1059 conserved hypothetical protein K17076 lysY; putative lysine transport system ATP-binding protein
D Swol_0316 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Swol_0315 putative ABC transporter permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Swol_0314 conserved hypothetical protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Swol_2012 ABC-type dipeptide transport system periplasmic component-like protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Swol_1690 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Swol_2486 ferrichrome-binding periplasmic protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Swol_2097 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Swol_1687 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Swol_1691 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Swol_1675 conserved hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Swol_1679 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Swol_1187 iron(III) ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Swol_1673 ferrichrome-binding periplasmic protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Swol_1676 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Swol_1473 iron(III) ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Swol_1695 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Swol_1472 iron(III) ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Swol_1694 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Swol_1891 cation ABC transporter, periplasmc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D Swol_1889 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D Swol_1890 ABC-type zinc transport system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Swol_0108 conserved hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D Swol_1047 conserved hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D Swol_2300 cobalt ABC transporter permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D Swol_1947 cobalt ABC transporter permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D Swol_1950 ABC-type cobalt transport system permease component CbiQ and related transporters-like protein K16785 ecfT; energy-coupling factor transport system permease protein
D Swol_1045 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Swol_2302 putative ABC transporter K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_1949 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_1952 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_1948 ABC-type transporter, ATPase component (cobalt transporters subfamily) K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_2301 putative ABC transporter K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_1951 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_1046 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Swol_2449 ABC-type multidrug transport system permease component K25181 ybhS; drug efflux transport system permease protein
D Swol_2447 ABC multidrug efflux pump, ATPase subunit K25182 ybhF; drug efflux transport system ATP-binding protein
D Swol_2448 ABC transporter-related protein K25182 ybhF; drug efflux transport system ATP-binding protein
D Swol_2446 secretion protein HlyD K25183 ybhG; membrane fusion protein YbhG
D Swol_0246 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Swol_0245 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Swol_2039 conserved hypothetical membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Swol_0182 ABC-type multidrug transport system permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Swol_2242 putative ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Swol_1384 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Swol_1722 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Swol_0181 ABC-type multidrug transport system permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Swol_2038 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Swol_1620 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Swol_1383 putative ABC transporter ATP-binding protein; RBL01943 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Swol_0180 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Swol_1723 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Swol_1367 ABC-type multidrug transport system ATPase component-like protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Swol_2243 ABC-type multidrug transport system ATPase component-like protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Swol_2458 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D Swol_1714 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D Swol_0943 ABC transporter component-like protein K02004 ABC.CD.P; putative ABC transport system permease protein
D Swol_2457 ABC-type transport systems, involved in lipoprotein release, ATPase components K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Swol_1715 ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Swol_0941 ATP binding protein of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Swol_0664 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Swol_0575 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Swol_1820 Na+-driven multidrug efflux pump-like protein K26937 dinF; MATE family, multidrug efflux pump
D Swol_0313 conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D Swol_2061 Na+-driven multidrug efflux pump-like protein K26937 dinF; MATE family, multidrug efflux pump
D Swol_2070 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D Swol_0091 Formate/nitrite family of transporters K21993 fdhC; formate transporter
D Swol_1671 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Swol_1154 conserved hypothetical protein K16052 ynaI; MscS family membrane protein
D Swol_1082 divalent cation transporter K06213 mgtE; magnesium transporter
D Swol_0239 conserved hypothetical protein K02556 motA; chemotaxis protein MotA
D Swol_0240 conserved hypothetical protein K02557 motB; chemotaxis protein MotB
D Swol_1763 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Swol_1192 conserved hypothetical protein K06296 gerKB; spore germination protein KB
D Swol_0074 hypothetical protein K06296 gerKB; spore germination protein KB
D Swol_0079 hypothetical protein K06296 gerKB; spore germination protein KB
D Swol_1139 conserved hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family
D Swol_1118 conserved hypothetical protein K18303 mexK; multidrug efflux pump
D Swol_1359 conserved hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D Swol_1140 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Swol_0654 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter
D Swol_1590 putative Na+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter
D Swol_1178 putative potassium efflux transporter K26735 KEA4_5_6; K+:H+ antiporter
D Swol_0913 K+ transporter trk K03498 trkH; trk/ktr system potassium uptake protein
D Swol_0914 conserved hypothetical protein K03499 trkA; trk/ktr system potassium uptake protein
D Swol_0331 extracellular solute-binding protein, family 7 K21395 yiaO; TRAP-type transport system periplasmic protein
D Swol_0938 Arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Swol_0939 conserved hypothetical protein K03325 ACR3; arsenite transporter
D Swol_0081 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D Swol_1584 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Swol_0122 uncharacterized membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D Swol_0922 AzlC-like protein K26605 azlC; branched chain amino acid efflux pump
D Swol_0923 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D Swol_1113 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter
D Swol_0825 cell cycle protein K03588 ftsW; cell division protein FtsW
D Swol_2394 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D Swol_1064 Inorganic diphosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Swol_0558 oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Swol_1537 FeoA K04758 feoA; ferrous iron transport protein A
D Swol_0662 putative Fe2+ transport protein K04758 feoA; ferrous iron transport protein A
D Swol_0661 Fe2+ transport system protein B-like protein K04759 feoB; ferrous iron transport protein B
D Swol_1539 nucleoside recognition proteinn K04759 feoB; ferrous iron transport protein B
D Swol_0894 MgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D Swol_0917 cation transport ATPase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:swo02044]
D Swol_0538 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Swol_0534 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Swol_0531 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Swol_0533 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Swol_0539 Tfp pilus assembly protein ATPase PilM-like protein K02662 pilM; type IV pilus assembly protein PilM
D Swol_0540 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D Swol_0541 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Swol_0532 twitching motility protein K02669 pilT; twitching motility protein PilT
D Swol_0956 protein of unknown function YGGT K02221 yggT; YggT family protein
D Swol_1596 competence protein ComEA helix-hairpin-helix region K02237 comEA; competence protein ComEA
D Swol_2391 putative ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Swol_1595 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D Swol_1710 hydrolase (metallo-beta-lactamase superfamily)-like protein K02238 comEC; competence protein ComEC
D Swol_2116 conserved hypothetical protein K02241 comFB; competence protein ComFB
D Swol_0869 flagella-associated protein K02400 flhA; flagellar biosynthesis protein FlhA
D Swol_0868 flagellar biosynthesis/type III secretory pathway protein K02401 flhB; flagellar biosynthesis protein FlhB
D Swol_1476 flagellar biosynthesis K04061 flhB2; flagellar biosynthesis protein
D Swol_0849 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Swol_0851 Flagellar biosynthesis/type III secretory pathway protein-like protein K02411 fliH; flagellar assembly protein FliH
D Swol_0852 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Swol_0862 CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D Swol_0864 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Swol_0865 flagellar biosynthetic protein K02419 fliP; flagellar biosynthesis protein FliP
D Swol_0866 conserved hypothetical protein K02420 fliQ; flagellar biosynthesis protein FliQ
D Swol_0867 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Swol_0238 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Swol_1425 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Swol_2348 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Swol_1424 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Swol_0277 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Swol_2313 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Swol_1498 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Swol_0777 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Swol_1427 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Swol_0682 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Swol_1443 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA
D Swol_0681 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:swo02042]
D Swol_1763 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Swol_1904 membrane protein, hemolysin III-like protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:swo02022]
D Swol_0952 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Swol_0951 response regulator receiver protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Swol_2441 response regulator receiver protein K07668 vicR; two-component system, OmpR family, response regulator VicR
D Swol_0185 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D Swol_1918 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Swol_1054 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Swol_2412 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D Swol_0590 response regulator receiver protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Swol_0444 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator
D Swol_2400 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator
D Swol_1332 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0874 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_1455 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0353 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0863 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1456 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1327 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1448 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1333 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_0334 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_0355 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1329 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Swol_1449 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Swol_0873 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C 02035 Bacterial motility proteins [BR:swo02035]
D Swol_1332 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0874 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_1455 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0353 putative CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Swol_0875 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Swol_1450 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Swol_1886 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Swol_1446 CheX protein (uncharacterized ORF in chemotaxis operon) K03409 cheX; chemotaxis protein CheX
D Swol_1447 chemotaxis operon protein K03409 cheX; chemotaxis protein CheX
D Swol_0876 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Swol_0335 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Swol_0877 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Swol_0695 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Swol_1330 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Swol_1457 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Swol_1329 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Swol_1449 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Swol_0873 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Swol_0863 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1456 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1327 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1448 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1333 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_0334 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_0355 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Swol_1451 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_2152 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_2162 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_0927 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_2151 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Swol_0851 Flagellar biosynthesis/type III secretory pathway protein-like protein K02411 fliH; flagellar assembly protein FliH
D Swol_0852 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Swol_0853 hypothetical protein K02413 fliJ; flagellar protein FliJ
D Swol_0864 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Swol_0865 flagellar biosynthetic protein K02419 fliP; flagellar biosynthesis protein FliP
D Swol_0866 conserved hypothetical protein K02420 fliQ; flagellar biosynthesis protein FliQ
D Swol_0867 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Swol_0869 flagella-associated protein K02400 flhA; flagellar biosynthesis protein FlhA
D Swol_0868 flagellar biosynthesis/type III secretory pathway protein K02401 flhB; flagellar biosynthesis protein FlhB
D Swol_0861 conserved hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D Swol_0862 CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D Swol_0849 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Swol_0860 flagellar protein (FliL)-like protein K02415 fliL; flagellar protein FliL
D Swol_0848 flagellar hook-basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE
D Swol_0855 Flagellar hook-length control protein-like protein K02414 fliK; flagellar hook-length control protein FliK
D Swol_0846 conserved hypothetical protein K02387 flgB; flagellar basal-body rod protein FlgB
D Swol_0847 flagellar basal body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D Swol_0856 Flagellar hook capping protein-like protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Swol_2373 flagellar basal-body rod protein (flgG-2) K02391 flgF; flagellar basal-body rod protein FlgF
D Swol_0947 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Swol_0946 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D Swol_0858 flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D Swol_0192 Flagellar hook-associated protein-like protein K02396 flgK; flagellar hook-associated protein 1
D Swol_0193 Flagellin and related hook-associated proteins-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D Swol_0198 Flagellin and related hook-associated proteins-like protein K02406 fliC; flagellin
D Swol_0197 Flagellar capping protein-like protein K02407 fliD; flagellar hook-associated protein 2
D Swol_0232 Flagellin-specific chaperone FliS-like protein K02422 fliS; flagellar secretion chaperone FliS
D Swol_0878 putative RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D Swol_0239 conserved hypothetical protein K02556 motA; chemotaxis protein MotA
D Swol_0240 conserved hypothetical protein K02557 motB; chemotaxis protein MotB
D Swol_0195 conserved hypothetical protein K13626 fliW; flagellar assembly factor FliW
D Swol_0190 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Swol_0233 hypothetical protein K06603 flaG; flagellar protein FlaG
D Swol_0854 hypothetical protein K02383 flbB; flagellar protein FlbB
D Swol_0859 hypothetical protein K02385 flbD; flagellar protein FlbD
D Swol_0870 conserved hypothetical protein K02404 flhF; flagellar biosynthesis protein FlhF
D Swol_0871 ParA protein K04562 flhG; flagellar biosynthesis protein FlhG
D Swol_0532 twitching motility protein K02669 pilT; twitching motility protein PilT
D Swol_0534 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Swol_0531 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Swol_0533 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Swol_0538 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Swol_0541 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Swol_0540 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D Swol_0539 Tfp pilus assembly protein ATPase PilM-like protein K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:swo04812]
D Swol_2294 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B K06990 MEMO1; MEMO1 family protein
D Swol_1641 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Swol_2374 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Swol_0833 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Swol_0832 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Swol_1637 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Swol_0344 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Swol_1636 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Swol_0346 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Swol_1635 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Swol_0345 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Swol_2568 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Swol_1454 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D Swol_0223 conserved hypothetical regulatory protein K03496 parA; chromosome partitioning protein
D Swol_0744 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D Swol_2567 chromosome segregation DNA-binding protein / transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Swol_2569 transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:swo04147]
D Swol_0276 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Swol_0272 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Swol_2040 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Swol_1249 thermostable dipeptidase. Metallo peptidase. MEROPS family M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Swol_1855 conserved hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Swol_1578 chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_0490 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_1452 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Swol_0386 Molecular chaperone-like protein K04043 dnaK; molecular chaperone DnaK
D Swol_0916 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Swol_2335 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Swol_2350 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Swol_1572 diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Swol_1486 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1934 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_2051 acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0308 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0675 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_0789 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Swol_1128 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Swol_2312 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Swol_1007 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_1787 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Swol_0690 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Swol_0009 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Swol_1775 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Swol_1978 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Swol_0697 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Swol_2121 electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Swol_0266 conserved hypothetical protein K03522 fixB; electron transfer flavoprotein alpha subunit
D Swol_2167 SPFH domain, Band 7 family protein K17081 PHB2; prohibitin 2
D Swol_2402 hypothetical protein K17081 PHB2; prohibitin 2
D Swol_0274 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:swo02048]
D Swol_1749 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Swol_2516 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Swol_0480 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Swol_1803 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Swol_2515 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Swol_0481 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Swol_1748 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Swol_1802 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Swol_1805 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Swol_0475 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Swol_2518 helicases-like protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Swol_0479 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_1804 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_2517 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_1809 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Swol_1751 CRISPR-associated protein, Cas6 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Swol_2522 CRISPR-associated protein, Csh1 family K19114 csh1; CRISPR-associated protein Csh1
D Swol_1808 hypothetical protein K19114 csh1; CRISPR-associated protein Csh1
D Swol_2520 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2
D Swol_1807 conserved hypothetical protein K19115 csh2; CRISPR-associated protein Csh2
D Swol_1806 CRISPR-associated protein, Cas5h family K19116 cas5h; CRISPR-associated protein Cas5h
D Swol_2519 CRISPR-associated protein, Cas5h family K19116 cas5h; CRISPR-associated protein Cas5h
D Swol_0477 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D Swol_0478 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D Swol_0476 CRISPR-associated protein, Csd5d family K19119 cas5d; CRISPR-associated protein Cas5d
D Swol_2527 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10
D Swol_1756 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D Swol_1755 hypothetical protein K19138 csm2; CRISPR-associated protein Csm2
D Swol_1754 CRISPR-associated protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D Swol_1753 CRISPR-associated protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D Swol_1752 CRISPR-associated protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D Swol_0516 type I restriction-modification system R subunit (endonuclease) K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Swol_2256 type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Swol_2257 Restriction endonuclease S subunits-like protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Swol_0515 type I restriction-modification system (specificity subunit) K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Swol_0512 type I restriction modification system M subunit (site-specific DNA-methyltransferase subunit) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Swol_2258 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Swol_0503 Site-specific DNA methylase-like protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Swol_0838 Site-specific DNA-methyltransferase (adenine-specific) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Swol_1547 type III restriction system endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Swol_1462 DNA or RNA helicases of superfamily II-like protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Swol_1548 site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Swol_1463 Adenine specific DNA methylase Mod-like protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Swol_2196 Hnh endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Swol_1116 GTPase subunit of restriction endonuclease-like protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D Swol_0993 Restriction endonuclease-like protein K07448 mrr; restriction system protein
D Swol_1876 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Swol_1879 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Swol_1877 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE
D Swol_1880 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Swol_1976 regulators of stationary/sporulation gene expression K19156 prlF; antitoxin PrlF
D Swol_0286 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D Swol_1075 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D Swol_1074 putative DNA-damage-inducibile protein K07473 dinJ; DNA-damage-inducible protein J
D Swol_0393 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D Swol_0150 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D Swol_1183 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D Swol_0432 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Swol_0392 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Swol_0433 prevent-host-death protein K19159 yefM; antitoxin YefM
D Swol_0151 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D Swol_1411 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D Swol_1971 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D Swol_0496 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D Swol_0577 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D Swol_2275 death-on-curing protein K07341 doc; death on curing protein
D Swol_0482 hypothetical protein K07334 higB-1; toxin HigB-1
D Swol_0483 putative plasmid maintenance system antidote protein, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Swol_0833 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Swol_1641 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Swol_2374 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Swol_0930 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Swol_0746 conserved hypothetical protein K19169 dndB; DNA sulfur modification protein DndB
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:swo04090]
C 01504 Antimicrobial resistance genes [BR:swo01504]
D Swol_0431 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component-like protein K02172 blaR1; bla regulator protein blaR1
D Swol_0429 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Swol_1358 Uncharacterized vancomycin resistance protein-like protein K18346 vanW; vancomycin resistance protein VanW
D Swol_1118 conserved hypothetical protein K18303 mexK; multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:swo00537]
D Swol_1249 thermostable dipeptidase. Metallo peptidase. MEROPS family M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:swo03100]
D Swol_R0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Swol_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Swol_R0055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Swol_R0052 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Swol_R0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Swol_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Swol_R0032 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Swol_R0046 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Swol_R0040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Swol_R0037 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Swol_R0050 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Swol_R0031 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Swol_R0044 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Swol_R0030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Swol_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Swol_R0038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Swol_R0065 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Swol_R0051 tRNA-His K14226 tRNA-His; tRNA His
D Swol_R0009 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Swol_R0057 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Swol_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Swol_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Swol_R0056 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Swol_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Swol_R0049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Swol_R0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Swol_R0060 tRNA-Met K14230 tRNA-Met; tRNA Met
D Swol_R0062 tRNA-Met K14230 tRNA-Met; tRNA Met
D Swol_R0045 tRNA-Met K14230 tRNA-Met; tRNA Met
D Swol_R0039 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Swol_R0048 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Swol_R0042 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Swol_R0058 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Swol_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Swol_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Swol_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Swol_R0006 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Swol_R0061 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Swol_R0059 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Swol_R0064 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Swol_R0033 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Swol_R0063 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Swol_R0043 tRNA-Val K14237 tRNA-Val; tRNA Val
D Swol_R0029 tRNA-Val K14237 tRNA-Val; tRNA Val
D Swol_R0066 tRNA-Val K14237 tRNA-Val; tRNA Val
D Swol_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Swol_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Swol_R0020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Swol_R0016 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Swol_R0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Swol_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Swol_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0017 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Swol_R0007 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Swol_R0068 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Swol_R0067 ssrA; prediction based on tmRNA website at Indiana University K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Swol_1818 (2Fe-2S)-binding K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Swol_1136 2Fe-2S iron-sulfur cluster binding domain K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Swol_1196 thiamine pyrophosphate enzyme K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Swol_1195 indolepyruvate oxidoreductase subunit beta 2 K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Swol_0788 Butyryl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]
D Swol_2124 conserved hypothetical protein K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D Swol_1833 NADH oxidase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3]
D Swol_2363 putative flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D Swol_2054 putative flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D Swol_0784 NADH dehydrogenase (quinone) K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D Swol_1701 NADH dehydrogenase (quinone) K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D Swol_2436 (Fe) hydrogenase, large subunit HymC, putative K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D Swol_1017 iron hydrogenase, small subunit K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D Swol_1925 Ferredoxin hydrogenase K00533 E1.12.7.2L; ferredoxin hydrogenase large subunit [EC:1.12.7.2]
D Swol_1049 pyruvate formate lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Swol_2272 ribonucleoside-triphosphate reductase, anaerobic-like protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Swol_2293 pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Swol_2438 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Swol_0028 conserved hypothetical protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D Swol_2025 conserved hypothetical protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D Swol_1865 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Swol_1956 Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Swol_0759 conserved hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Swol_1513 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Swol_0347 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Swol_2463 RNA-directed DNA polymerase (reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Swol_1977 conserved hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Swol_1909 RNA-directed DNA polymerase (reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Swol_1709 RNA-directed DNA polymerase (reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Swol_0304 RNA-directed DNA polymerase (reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Swol_0166 RNA-directed DNA polymerase (reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Swol_0178 RNA-directed DNA polymerase (reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Swol_0146 RNA-directed DNA polymerase (reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Swol_1035 conserved hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Swol_1253 conserved hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Swol_2365 putative nucleic-acid-binding protein K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D Swol_2103 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Swol_0614 putative anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D Swol_2368 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D Swol_0278 putative esterase/lipase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D Swol_0333 phosphatase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Swol_0093 Phosphoprotein phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D Swol_1248 metal-dependent phosphoesterases (PHP family) K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Swol_0523 HAD-superfamily phosphatase subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D Swol_1565 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D Swol_1041 response regulator receiver protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D Swol_0050 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Swol_1062 Negative regulator of beta-lactamase expression-like protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Swol_1232 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Swol_1069 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Swol_2445 uncharacterized protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D Swol_0211 putative LmbE-like protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D Swol_1719 methanol dehydrogenase regulator K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Swol_2393 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D Swol_1838 conserved hypothetical protein K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D Swol_1884 conserved hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Swol_0969 conserved hypothetical protein K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130]
D Swol_1121 L-lysine 2,3-aminomutase K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9]
D Swol_0411 CoA enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D Swol_0428 (R)-hydroxyglutaryl-CoA dehydratase activator K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D Swol_0452 putative CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D Swol_1788 protein of unknown function DUF181 K24411 patD; oxazoline/thiazoline synthase [EC:6.2.2.2 6.2.2.3]
D Swol_1350 UDP-N-acetylmuramyl tripeptide synthase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D Swol_0623 cation transporting ATPase-like protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Swol_1240 conserved hypothetical protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Swol_2086 cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D Swol_2551 putative signal transduction protein with CBS domains K04767 acuB; acetoin utilization protein AcuB
D Swol_1097 conserved hypothetical protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D Swol_1030 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D Swol_1959 hypothetical protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D Swol_0407 Nitrogenase molybdenum-iron protein alpha and beta chains-like protein K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D Swol_2462 conserved protein, putative ferredoxin-type protein NapH K02574 napH; ferredoxin-type protein NapH
D Swol_1957 iron-sulfur cluster-binding protein K02574 napH; ferredoxin-type protein NapH
D Swol_0696 electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Swol_2122 conserved hypothetical protein K03521 fixA; electron transfer flavoprotein beta subunit
D Swol_0267 Electron transfer flavoprotein beta subunit-like protein K03521 fixA; electron transfer flavoprotein beta subunit
D Swol_2123 conserved hypothetical protein K03855 fixX; ferredoxin like protein
D Swol_2454 uridylate kinase K00947 mosAB; molybdenum storage protein
D Swol_0625 protein of unknown function DUF1458 K09165 K09165; dodecin
C 99983 Lipid metabolism
D Swol_0442 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D Swol_1050 conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D Swol_1500 conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D Swol_1901 conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Swol_0953 protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Swol_1527 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D Swol_1207 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D Swol_0342 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D Swol_0782 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D Swol_1992 hypothetical protein K22390 ACP7; acid phosphatase type 7
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Swol_1238 conserved hypothetical protein K09777 remA; extracellular matrix regulatory protein A
D Swol_0004 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D Swol_0089 RNA binding S1 K07571 K07571; S1 RNA binding domain protein
D Swol_0305 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
D Swol_1203 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D Swol_2369 conserved hypothetical protein K19411 mcsA; protein arginine kinase activator
D Swol_1657 trigger factor K03545 tig; trigger factor
D Swol_0796 Uncharacterized protein involved in formate dehydrogenase formation-like protein K02380 fdhE; FdhE protein
D Swol_1822 putative formate dehydrogenase formation protein FdhE K02380 fdhE; FdhE protein
D Swol_0281 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Swol_1445 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D Swol_1520 ResB protein required for cytochrome c biosynthesis-like protein K07399 resB; cytochrome c biogenesis protein
D Swol_0029 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor
D Swol_1138 Xanthine and CO dehydrogenases maturation factor XdhC/CoxF family-like protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D Swol_2009 conserved hypothetical protein K07445 K07445; putative DNA methylase
D Swol_1642 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Swol_2262 DNA repair proteins K03630 radC; DNA repair protein RadC
D Swol_0014 conserved hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D Swol_0814 DNA-3-methyladenine glycosylase III K07457 K07457; endonuclease III related protein
D Swol_1475 endonuclease K07460 yraN; putative endonuclease
D Swol_2428 conserved hypothetical protein K07461 K07461; putative endonuclease
D Swol_0839 Rossmann-fold nucleotide-binding protein involved in DNA uptake K04096 smf; DNA processing protein
D Swol_0463 Recombination protein MgsA K07478 ycaJ; putative ATPase
D Swol_1465 conserved hypothetical protein K06919 K06919; putative DNA primase/helicase
D Swol_2502 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_2465 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_1343 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_1747 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_1881 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_0521 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_0138 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_0709 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_1056 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_0720 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_0741 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_1166 hypothetical protein K07481 K07481; transposase, IS5 family
D Swol_2223 transposase K07483 K07483; transposase
D Swol_0995 transposase IS3/IS911 K07483 K07483; transposase
D Swol_2202 IS66 Orf2 like K07484 K07484; transposase
D Swol_2203 Transposase and inactivated derivatives-like protein K07484 K07484; transposase
D Swol_2210 IS66 Orf2 like K07484 K07484; transposase
D Swol_2211 Transposase and inactivated derivatives-like protein K07484 K07484; transposase
D Swol_2281 Transposase and inactivated derivatives-like protein K07484 K07484; transposase
D Swol_2282 IS66 Orf2 like K07484 K07484; transposase
D Swol_1750 transposase K07486 K07486; transposase
D Swol_0506 transposase K07486 K07486; transposase
D Swol_0724 transposase K07486 K07486; transposase
D Swol_2192 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D Swol_2198 transposase K07491 rayT; REP-associated tyrosine transposase
D Swol_0164 Transposase and inactivated derivatives-like protein K07491 rayT; REP-associated tyrosine transposase
D Swol_0136 Transposase and inactivated derivatives-like protein K07491 rayT; REP-associated tyrosine transposase
D Swol_0148 Transposase and inactivated derivatives-like protein K07491 rayT; REP-associated tyrosine transposase
D Swol_1055 transposase K07491 rayT; REP-associated tyrosine transposase
D Swol_2195 hypothetical protein K07493 K07493; putative transposase
D Swol_0155 conserved hypothetical protein K07493 K07493; putative transposase
D Swol_0996 integrase, catalytic region K07497 K07497; putative transposase
D Swol_2074 transposase IS3/IS911 K07497 K07497; putative transposase
D Swol_2079 transposase K07497 K07497; putative transposase
D Swol_2222 transposase K07497 K07497; putative transposase
D Swol_2508 integrase, catalytic region K07497 K07497; putative transposase
D Swol_2509 integrase, catalytic region K07497 K07497; putative transposase
D Swol_2510 transposase IS3/IS911 K07497 K07497; putative transposase
D Swol_0430 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Swol_0031 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Swol_1646 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D Swol_0034 SigmaK-factor processing regulatory BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D Swol_2573 single-stranded nucleic acid binding R3H K06346 jag; spoIIIJ-associated protein
D Swol_1413 nucleoside recognition proteinn K06373 spmA; spore maturation protein A
D Swol_1412 nucleoside recognition proteinn K06374 spmB; spore maturation protein B
D Swol_0613 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D Swol_0605 uncharacterized membrane protein K06384 spoIIM; stage II sporulation protein M
D Swol_1339 putative stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D Swol_1127 putative stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D Swol_1586 conserved hypothetical protein K06385 spoIIP; stage II sporulation protein P
D Swol_0063 pro-sigma-E processing factor spoIIR K06387 spoIIR; stage II sporulation protein R
D Swol_0550 stage III sporulation protein spoIIIAA K06390 spoIIIAA; stage III sporulation protein AA
D Swol_0551 conserved hypothetical protein K06391 spoIIIAB; stage III sporulation protein AB
D Swol_0552 conserved hypothetical protein K06392 spoIIIAC; stage III sporulation protein AC
D Swol_0553 putative sporulation protein K06393 spoIIIAD; stage III sporulation protein AD
D Swol_0554 conserved hypothetical protein K06394 spoIIIAE; stage III sporulation protein AE
D Swol_0555 conserved hypothetical protein K06395 spoIIIAF; stage III sporulation protein AF
D Swol_0556 hypothetical protein K06396 spoIIIAG; stage III sporulation protein AG
D Swol_0557 hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH
D Swol_1322 conserved hypothetical protein K06398 spoIVA; stage IV sporulation protein A
D Swol_1467 site-specific recombinase, putative K06400 spoIVCA; site-specific DNA recombinase
D Swol_0626 spore formation protein spoVAC K06405 spoVAC; stage V sporulation protein AC
D Swol_0627 stage V sporulation AD K06406 spoVAD; stage V sporulation protein AD
D Swol_0628 SpoVA protein K06407 spoVAE; stage V sporulation protein AE
D Swol_0629 GerA spore germination protein K06408 spoVAF; stage V sporulation protein AF
D Swol_1272 conserved hypothetical protein K06410 spoVFA; dipicolinate synthase subunit A
D Swol_1271 conserved hypothetical protein K06411 spoVFB; dipicolinate synthase subunit B
D Swol_0983 SpoVK K06413 spoVK; stage V sporulation protein K
D Swol_2067 ATPases of the AAA+ class-like protein K06413 spoVK; stage V sporulation protein K
D Swol_1250 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D Swol_0201 conserved hypothetical protein K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D Swol_0760 small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D Swol_0918 hypothetical protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D Swol_1567 putative stage IV sporulation YqfD K06438 yqfD; similar to stage IV sporulation protein
D Swol_1194 grkA; spore germination protein, GrkA K06295 gerKA; spore germination protein KA
D Swol_0078 germination protein K06295 gerKA; spore germination protein KA
D Swol_0075 hypothetical protein K06297 gerKC; spore germination protein KC
D Swol_0077 conserved hypothetical protein K06297 gerKC; spore germination protein KC
D Swol_1193 conserved hypothetical protein K06297 gerKC; spore germination protein KC
D Swol_0447 putative germination protein GerM K06298 gerM; germination protein M
D Swol_1052 Spore germination protein-like protein K06298 gerM; germination protein M
C 99993 Cell motility
D Swol_2034 conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D Swol_1566 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D Swol_0179 secretion protein HlyD K01993 ABC-2.TX; HlyD family secretion protein
D Swol_1713 Multidrug resistance efflux pump-like protein K02005 ABC.CD.TX; HlyD family secretion protein
D Swol_2456 conserved hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D Swol_2168 iron-binding protein, hemerythrin K07216 hr; hemerythrin
D Swol_0801 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Swol_1557 molybdate-binding protein K07219 K07219; putative molybdopterin biosynthesis protein
D Swol_1821 putative molybdate-binding protein K07219 K07219; putative molybdopterin biosynthesis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Swol_0302 putative helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D Swol_0765 phospholipase, putative K07001 K07001; NTE family protein
D Swol_0062 conserved hypothetical protein K07001 K07001; NTE family protein
D Swol_1185 lemA protein K03744 lemA; LemA protein
D Swol_0255 conserved hypothetical protein K08972 K08972; putative membrane protein
D Swol_1444 conserved hypothetical protein K08972 K08972; putative membrane protein
C 99997 Function unknown
D Swol_2473 radical SAM domain protein K06871 K06871; uncharacterized protein
D Swol_1186 conserved hypothetical protein K06872 K06872; uncharacterized protein
D Swol_0158 conserved hypothetical protein K06885 K06885; uncharacterized protein
D Swol_1667 conserved hypothetical protein K06889 K06889; uncharacterized protein
D Swol_2090 DNA-binding proteins-like protein K06933 K06933; uncharacterized protein
D Swol_0096 HD superfamily hydrolase K06950 K06950; uncharacterized protein
D Swol_1496 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D Swol_1229 conserved hypothetical protein K06973 K06973; uncharacterized protein
D Swol_0383 GPR1/FUN34/YaaH family protein K07034 K07034; uncharacterized protein
D Swol_1911 conserved hypothetical protein K07034 K07034; uncharacterized protein
D Swol_1298 conserved hypothetical protein K07075 K07075; uncharacterized protein
D Swol_0638 nucleotidyltransferase K07075 K07075; uncharacterized protein
D Swol_0548 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D Swol_1728 conserved hypothetical protein K07075 K07075; uncharacterized protein
D Swol_1102 conserved hypothetical protein K07075 K07075; uncharacterized protein
D Swol_2083 permease K07090 K07090; uncharacterized protein
D Swol_0455 conserved hypothetical protein K07095 K07095; uncharacterized protein
D Swol_1844 conserved hypothetical protein K07098 K07098; uncharacterized protein
D Swol_2089 conserved hypothetical protein K07112 K07112; uncharacterized protein
D Swol_0984 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Swol_0027 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Swol_2101 NAD(FAD)-utilizing dehydrogenase K07137 K07137; uncharacterized protein
D Swol_0371 conserved hypothetical protein K07150 K07150; uncharacterized protein
D Swol_2575 conserved hypothetical protein K08998 K08998; uncharacterized protein
D Swol_1361 protein of unknown function DUF763 K09003 K09003; uncharacterized protein
D Swol_1161 protein of unknown function UPF0182 K09118 K09118; uncharacterized protein
D Swol_1117 hypothetical protein K09124 K09124; uncharacterized protein
D Swol_0959 conserved hypothetical protein K09131 K09131; uncharacterized protein
D Swol_1665 protein of unknown function DUF364 K09138 K09138; uncharacterized protein
D Swol_1692 conserved hypothetical protein K09138 K09138; uncharacterized protein
D Swol_1426 metal dependent phosphohydrolase K09163 K09163; uncharacterized protein
D Swol_1772 HDIG domain protein, ambiguity K09163 K09163; uncharacterized protein
D Swol_1230 conserved hypothetical protein K09729 K09729; uncharacterized protein
D Swol_1439 conserved hypothetical cytosolic protein K09740 K09740; uncharacterized protein
D Swol_0879 conserved hypothetical protein K09749 K09749; uncharacterized protein
D Swol_1511 hypothetical protein K09749 K09749; uncharacterized protein
D Swol_1177 conserved hypothetical protein K09764 K09764; uncharacterized protein
D Swol_1598 conserved hypothetical protein K09766 K09766; uncharacterized protein
D Swol_1505 conserved hypothetical protein K09768 K09768; uncharacterized protein
D Swol_0041 conserved hypothetical protein K09770 K09770; uncharacterized protein
D Swol_0054 conserved hypothetical protein K09776 K09776; uncharacterized protein
D Swol_1499 conserved hypothetical protein K09787 K09787; uncharacterized protein
D Swol_1006 conserved hypothetical protein K09793 K09793; uncharacterized protein
D Swol_0441 hypothetical protein K09986 K09986; uncharacterized protein
D Swol_2133 conserved hypothetical protein K09989 K09989; uncharacterized protein
D Swol_2169 YqfW K05967 K05967; uncharacterized protein
D Swol_1338 conserved hypothetical protein K05739 seaA; uncharacterized protein
D Swol_1612 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein
D Swol_1647 conserved hypothetical protein K07220 K07220; uncharacterized protein
D Swol_0920 conserved hypothetical protein K07220 K07220; uncharacterized protein
D Swol_0898 conserved hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 19, 2024