+E Ribosome biogenesis KO
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Ribosome Biogenesis - Synechocystis sp. PCC 6803
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D slr1646 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D slr0346 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C slr0321 Era; GTP-binding protein Era K03595 era; GTPase
C sll0503 unknown protein K03595 era; GTPase
C slr1090 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C slr0743 nusA; N utilization substance protein K02600 nusA; transcription termination/antitermination protein NusA
C sll0271 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
C sll1742 nusG; transcription antitermination protein; NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D slr0361 hypothetical protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D sll0708 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D slr0679 fmu_fmv; Fmu and Fmv protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D slr0383 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D slr0722 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D slr0072 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D sll1144 hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D sll0818 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D slr0950 hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D slr0955 hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D slr0064 hypothetical protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D sll0098 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D slr0950 hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D sll1967 hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D slr1629 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D slr1592 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D slr0612 hypothetical protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
B ribosomal protein modification factors
C slr0853 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C sll0310 unknown protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C slr0808 unknown protein K02860 rimM; 16S rRNA processing protein RimM
C slr0082 hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
C sll1909 prmA; ribosomal protein L11 methyltransferase; PrmA K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C slr1646 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C slr0346 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C slr1129 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
C sll1547 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C slr0954 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
B rRNA helicases
C slr0083 deaD; ATP-dependent RNA helicase; DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
B GTPases
C slr0321 Era; GTP-binding protein Era K03595 era; GTPase
C sll0503 unknown protein K03595 era; GTPase
C sll0898 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C slr1974 hypothetical protein K03977 engA; GTPase
C slr1090 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
C slr0267 hypothetical protein K14540 rbgA; ribosome biogenesis GTPase A
C slr1521 hflX; GTP-binding protein; HflX K03665 hflX; GTPase
B Other maturation factors
C sll1866 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C slr1325 spoT; (p)ppGpp 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C sll0754 hypothetical protein K02834 rbfA; ribosome-binding factor A
C slr0742 hypothetical protein K09748 rimP; ribosome maturation factor RimP
C slr1886 putative iojap protein K09710 ybeB; ribosome-associated protein
C slr0053 hypothetical protein K07042 ybeY; probable rRNA maturation factor
C sll0245 hypothetical protein K06942 ychF; ribosome-binding ATPase
C slr0816 unknown protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024