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Transcription Machinery - Thermoanaerobacter sp. X514
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
E Teth514_1028 beta-lactamase domain protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E Teth514_0895 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E Teth514_0859 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E Teth514_0860 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E Teth514_1760 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E Teth514_1314 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
E Teth514_1847 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Teth514_0644 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Teth514_1501 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E Teth514_2000 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E Teth514_2001 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E Teth514_1559 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E Teth514_0850 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor
E Teth514_0074 putative RNA polymerase, sigma 28 subunit, FliA/WhiG family K03093 sigI; RNA polymerase sigma-I factor
E Teth514_1805 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03093 sigI; RNA polymerase sigma-I factor
E Teth514_0344 hypothetical protein K26992 sigO; RNA polymerase sigma-O factor
E Teth514_1664 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E Teth514_1648 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
E Teth514_1534 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
E Teth514_2239 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
E Teth514_0854 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
E Teth514_2146 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E Teth514_1977 response regulator receiver protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E Teth514_2252 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D Transcription elongation factors
E Teth514_0809 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E Teth514_0089 transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024