+E Transcription factors KO
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Transcription Factors - Caldanaerobacter subterraneus subsp. tengcongensis
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
C LysR family
D TTE0082 LysR; Transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D TTE0987 LysR2; Transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D TTE1945 GlpR; Transcriptional regulator of sugar metabolism K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D TTE2588 GlpR2; Transcriptional regulator of sugar metabolism K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D TTE0170 transcription regulator of sigma-E/sigma-K-dependent gene spoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D TTE0979 CBS domains K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
D TTE0201 PurR2; Transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TTE0797 PurR6; Transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TTE0349 PurR3; Transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TTE0480 PurR4; Transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TTE0803 PurR7; Transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TTE1952 PurR8; Transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D TTE0053 PurR; Transcriptional regulator K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
C GntR family
D TTE0461 PhnF; Transcriptional regulator K03710 K03710; GntR family transcriptional regulator
C TetR/AcrR family
C Lrp/AsnC family
C LuxR family
C MarR family
C MerR family
C Fur family
D TTE1252 Fur3; Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D TTE1851 Fur5; Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D TTE0366 Fur2; Fe2+/Zn2+ uptake regulation proteins K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D TTE1767 Fur4; Fe2+/Zn2+ uptake regulation proteins K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
C CRP/FNR family
D TTE2773 Crp2; cAMP-binding domains - Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TTE1614 Crp; cAMP-binding domains - Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
C Rrf2 family
D TTE1242 predicted transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
C ArsR family
D TTE2468 ArsR; predicted Transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
C XRE family
C PadR family
C Other families
D TTE1857 hypothetical protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D TTE1078 predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D TTE1965 BirA; Biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D TTE0787 NrfG2; TPR-repeat-containing proteins K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D TTE1138 NrfG3; TPR-repeat-containing proteins K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D TTE2174 HipB3; predicted Transcriptional regulator K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D TTE2574 Apt2; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D TTE0191 AtoC; AAA superfamily ATPases with N-terminal receiver domain K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D TTE0687 AcoR; putative regulator of acetoin metabolism K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D TTE0413 hypothetical protein K26990 rsoA; sigma-O factor regulatory protein RsoA
D TTE1978 SrmR2; Regulator of polyketide synthase expression K02647 cdaR; carbohydrate diacid regulator
D TTE0717 PspF3; NtrC family Transcriptional regulator, ATPase domain protein K06714 rocR; arginine utilization regulatory protein
D TTE0543 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor
D TTE1446 transcriptional pleiotropic repressor K03706 codY; transcriptional pleiotropic repressor
D TTE2721 predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D TTE2124 Helix-turn-helix K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D TTE0250 NikR; predicted Transcriptional regulator containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D TTE2167 NikR2; predicted Transcriptional regulator containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C Other families
B Other transcription factors
C BglG family
D TTE0340 putative transcriptional regulator K03483 mtlR; mannitol operon transcriptional activator
D TTE0598 putative transcriptional regulator K03483 mtlR; mannitol operon transcriptional activator
D TTE0303 PtsN4; Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) K03483 mtlR; mannitol operon transcriptional activator
C Others
D TTE1232 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D TTE1664 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D TTE1031 SrmR; Regulator of polyketide synthase expression K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator
D TTE0106 transcription regulator AbrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D TTE2563 transcription regulator spoVT K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D TTE2790 Spo0J4; predicted Transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TTE2792 Spo0J5; predicted Transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TTE2041 Spo0J; predicted Transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TTE2069 Spo0J2; predicted Transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TTE2081 Spo0J3; predicted Transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TTE2004 GlpP; Glycerol-3-phosphate responsive antiterminator (mRNA-binding) K02443 glpP; glycerol uptake operon antiterminator
D TTE1301 ArgR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D TTE0953 HrcA; Transcriptional regulator of heat shock gene K03705 hrcA; heat-inducible transcriptional repressor
D TTE2330 transcription repressor of class III stress genes K03708 ctsR; transcriptional regulator of stress and heat shock response
D TTE0864 PspC; putative stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D TTE1763 DeoR2; Transcriptional regulator, contains sigma factor-related N-terminal domain K05311 cggR; central glycolytic genes regulator
D TTE1536 PyrR; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TTE1634 predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains K07738 nrdR; transcriptional repressor NrdR
D TTE1654 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0